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PAthogenisity Island DataBase (PAI DB)

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Homologs of pmt2 gene of AY144117

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YPD8_3244
( YP_005510307.1 )

hypothetical protein

NC_017160
(Yersinia pestis D182038)

9e-138

2) SSON_0239
( YP_309258.1 )

hypothetical protein

NC_007384
(Shigella sonnei Ss046)

4e-105

• Sequence Alignments

1) YPD8_3244 in NC_017160


> AY144117|13|G12|27497174|AAN64204.1|Photorhabdus_luminescens_W14|+|22819..24401|pmt2|-|Pmt2
Length=527

 Score =  483 bits (1820),  Expect = 9e-138, Method: Compositional matrix adjust.
 Identities = 276/471 (59%), Positives = 376/471 (80%), Gaps = 3/471 (0%)

Query  5    FFIRIAKPAIPRLKASIPVVLALM---ACAALIWVWIYGPEWQLGENYPFETLLSRWLVT  61
            ++  I KPA+PRL +  +    ++   +C ALIW+W  GP WQ+ +  P+ETL +RWL T
Sbjct  7    LLKNIKKPAMPRLPPLKAAASLILALLPCLALIWLWWWGPGWQFKQTRPLETLSARWLAT  66

Query  62   AVFVLVAVCWLSLKVMRRVQHLEKLQLQTKIQLDDPVSADIEQQNHYLNGWKHQLQRHLN  121
             +++L+A+  +++K+ RR+++LEKL+L+  ++  DP  ADI +Q+ YL+ WK QLQRHL 
Sbjct  67   VILLLLALSVVGIKIWRRLRQLEKLRLEVELKAVDPALADITRQDSYLHHWKAQLQRHLG  126

Query  122  TPEYLYRLPWYMVIGARNSGKSTLIKEGYKLTEISASERLHAEDAADLRVRCWLGEQAVI  181
            T +YLY+ PWY+V+G   SGK++LI+EG +LT+I+A++ L +E+A  L++RCWLGE+AVI
Sbjct  127  TWDYLYQRPWYLVMGNTGSGKTSLIQEGCRLTDIAAPDTLTGEEALPLHLRCWLGEKAVI  186

Query  182  IDPAGVLIEQPTTPIAGKASLNSRLWQSLLSWLIEQRQRQPLNGIILTVDLHQMMTANKA  241
            IDP G LI+Q + P + K+ L +RLWQ+LL+WL E+RQRQPLNGIILTVD+H+++T NKA
Sbjct  187  IDPDGFLIDQISPPDTPKPQLPARLWQALLAWLTENRQRQPLNGIILTVDIHRLLTDNKA  246

Query  242  QRETYVADIHQRLQEIRLSLHSQVPLYVVFTKMDLLYGFEAMYQSLDKAEREAVLGVTFS  301
            QRE  +A +H RLQ++RL+LH+++P Y+V+TK+D L GF A +QSLD+++R  +LGVTFS
Sbjct  247  QRERVIAALHLRLQDLRLTLHNHLPCYLVLTKLDRLHGFSAAFQSLDRSQRAQILGVTFS  306

Query  302  LNAADPDVWRTELKQFWQQWVAQLNGAMPDMMLNSVDAGQRSQLFSFTRQMQGLHDYVVQ  361
            LNA D + WR+EL QFW+QW+ QLN+AMPDMMLN VD +QRS LFSFTRQ+QGLH  +VQ
Sbjct  307  LNAQDEHSWRAELAQFWRQWMQQLNAAMPDMMLNKVDISQRSPLFSFTRQIQGLHSALVQ  366

Query  362  LLEGILYRGEHAQPLLRGVYLTSAQQRGQMDDIFTQSAAVQYHLAPQAFPTWPVSDTTPY  421
            LLEG+LY G  AQP LRGVYLTS+ Q GQMDDIFTQSAAVQYHL+PQAFPTWPV+DT+PY
Sbjct  367  LLEGLLYNGGPAQPGLRGVYLTSSTQIGQMDDIFTQSAAVQYHLGPQAFPTWPVADTAPY  426

Query  422  FTKALFNQVLLAEPNLAGENGIWLQKTRKRMFIFSGVGALAALTLWGYWHY  472
            FT ALF++VLLAEPNLA+EN +WL++ R +++ FS VGA   L+LW  WHY
Sbjct  427  FTHALFEEVLLAEPNLAAENRLWLNRHRHKLLTFSTVGAGVVLALWTGWHY  477

2) SSON_0239 in NC_007384


> AY144117|13|G12|27497174|AAN64204.1|Photorhabdus_luminescens_W14|+|22819..24401|pmt2|-|Pmt2
Length=527

 Score =  375 bits (1409),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 250/483 (52%), Positives = 353/483 (74%), Gaps = 9/483 (1%)

Query  47   GPMWTLYEEQWLKPLANRWLATAAWGIIALVWLTVRVMKRLQQLEKMQKQQREEAVDPLS  106
            GP W + + + L  L+ RWLAT    ++AL  + +++ +RL+QLEK++ +    AVDP  
Sbjct  45   GPGWQFKQTRPLETLSARWLATVILLLLALSVVGIKIWRRLRQLEKLRLEVELKAVDPAL  104

Query  107  VELNAQQRYLDRWLLRLQRHLDNRRFLWQLPWYMVIGPAGSGKTTLLREGFPSDIIYAPE  166
             ++  Q+ YL++W  +LQRHL+ + +L Q PWY+V+G +GSGKT+L++EG     I AP+
Sbjct  105  ADITRQDSYLHHWKAQLQRHLGTWDYLYQRPWYLVMGNTGSGKTSLIQEGCRLTDIAAPD  164

Query  167  GARGAEQ-RLYLTPHVGKQAVIFDIDGTLC---APADADI--LHRRLWEHALGWLKEKRA  220
               G E   L L   +G +AVI+D DG L    +P+D+    L  RLW+  L+WL E+R 
Sbjct  165  TLTGEEALPLHLRCWLGEKAVIIDPDGFLIDQISPPDTPKPQLPARLWQALLAWLTENRQ  224

Query  221  RQPLNGiiltldlpdlltADKRRREHLLQTLRSRLQDIRQHLHCQLPVYVVLTRLDLLQG  280
            RQPLNGIILT+D+  LLT +K +RE+++ +L+ RLQD+R  LH +LP Y+VLT+LD L+G
Sbjct  225  RQPLNGIILTVDIHRLLTDNKAQRERVIAALHLRLQDLRLTLHNHLPCYLVLTKLDRLHG  284

Query  281  FAALFQSLNRQDRDAILGVTFTRRAHENDDWRTELNAFWQTWVDRMNLALPDLMVAQTHT  340
            F+A FQSL+R +R  ILGVTF+  A++++ WR+EL  FW+ W++++N A+PD+M+ + + 
Sbjct  285  FSAAFQSLDRSQRAQILGVTFSLNAQDEHSWRAELAQFWRQWMQQLNAAMPDMMLNKVDI  344

Query  341  --RASLFSFSRQMQGSREPLVSLLEGLL-DGENMNVMLRGVYLTSSLQRGQMDDIFTQSA  397
              R++LFSF+RQ+QG + +LV LLEGLL +G   +  LRGVYLTSS Q GQMDDIFTQSA
Sbjct  345  SQRSPLFSFTRQIQGLHSALVQLLEGLLYNGGPAQPGLRGVYLTSSTQIGQMDDIFTQSA  404

Query  398  ARQYRLGNNPLASWPLVDTAPYFTRSLFPQALLAEPNLATESRAWLIRSRRRLTVFSATG  457
            A QY+LG +++++WP+ DTAPYFT++LF + LLAEPNLA+E+R WL R R++L  FS+ G
Sbjct  405  AVQYHLGPQAFPTWPVADTAPYFTHALFEEVLLAEPNLAAENRLWLNRHRHKLLTFSTVG  464

Query  458  GVAALLLITGWHHYYNGNYQSGITVLKQAKAFMDVPPPQGEDDFGNLQLPLLNPVRDATL  517
            +   L L TGWH YY+ NY++G  VL QAK+F+ VPPPQGED  GNLQLPLLNPVR+ATL
Sbjct  465  AGVVLALWTGWHYYYQKNYRAGDEVLAQAKTFLSVPPPQGEDRNGNLQLPLLNPVREATL  524

Query  518  AYG  520
            AYG
Sbjct  525  AYG  527