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Homologs of HH0245 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0245
( NP_859776.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

0.0

100

2) HCN_1423
( YP_006235737.1 )

type VI secretion protein VC_A0110 family

NC_017761
(Helicobacter cinaedi PAGU611)

1e-132

3) HCBAA847_1595
( YP_007601456.1 )

VC_A0110 family type VI secretion protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

2e-132

• Sequence Alignments

1) HH0245 in NC_004917


> NC_004917_P1|13|G13|32265744|NP_859776.1|Helicobacter_hepaticus_ATCC_51449|-|12924..14639|-|HH0245|hypothetical 
protein
Length=571

 Score =  915 bits (3468),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 571/571 (100%), Positives = 571/571 (100%), Gaps = 0/571 (0%)

Query  1    MKNIHYFRKELDYLHKMREIFVNKYPKLAPFLSHNSNDPDVERIIESLALLTSKIHEELD  60
            MKNIHYFRKELDYLHKMREIFVNKYPKLAPFLSHNSNDPDVERIIESLALLTSKIHEELD
Sbjct  1    MKNIHYFRKELDYLHKMREIFVNKYPKLAPFLSHNSNDPDVERIIESLALLTSKIHEELD  60

Query  61   GNIPLIAESLINILAPNYTNSLPSMCIQDFALKPESKECKVFIPRHTSLKSTPINQVQCE  120
            GNIPLIAESLINILAPNYTNSLPSMCIQDFALKPESKECKVFIPRHTSLKSTPINQVQCE
Sbjct  61   GNIPLIAESLINILAPNYTNSLPSMCIQDFALKPESKECKVFIPRHTSLKSTPINQVQCE  120

Query  121  FKTIYDVCLHPLKISDMSLTNEGKQSVFCLDIVSTNKFFKIADMDIHFLQIYLGSEVYSA  180
            FKTIYDVCLHPLKISDMSLTNEGKQSVFCLDIVSTNKFFKIADMDIHFLQIYLGSEVYSA
Sbjct  121  FKTIYDVCLHPLKISDMSLTNEGKQSVFCLDIVSTNKFFKIADMDIHFLQIYLGSEVYSA  180

Query  181  NTLLLWLLCYLQEIVIVCADTLTSFKIPCDSLETTGFDKNESMFSNGDVGFSAFTLLQEL  240
            NTLLLWLLCYLQEIVIVCADTLTSFKIPCDSLETTGFDKNESMFSNGDVGFSAFTLLQEL
Sbjct  181  NTLLLWLLCYLQEIVIVCADTLTSFKIPCDSLETTGFDKNESMFSNGDVGFSAFTLLQEL  240

Query  241  LFLPEKFAFVRIKNLEILKECQSEKMTFKFIFKKELPKDTLPKANQFSLFSTPIVNLFST  300
            LFLPEKFAFVRIKNLEILKECQSEKMTFKFIFKKELPKDTLPKANQFSLFSTPIVNLFST
Sbjct  241  LFLPEKFAFVRIKNLEILKECQSEKMTFKFIFKKELPKDTLPKANQFSLFSTPIVNLFST  300

Query  301  QTEPILTDHTRNGYRIFIDRAHLNAYSVIQVLKVKAHNSDSGRRILKNYNSFERFEFVDK  360
            QTEPILTDHTRNGYRIFIDRAHLNAYSVIQVLKVKAHNSDSGRRILKNYNSFERFEFVDK
Sbjct  301  QTEPILTDHTRNGYRIFIDRAHLNAYSVIQVLKVKAHNSDSGRRILKNYNSFERFEFVDK  360

Query  361  GNDFYAISNKQDANGEHYKEISIYSNQSRRETLSIDVLCSNNNLPNGLQIGSINEIVGYQ  420
            GNDFYAISNKQDANGEHYKEISIYSNQSRRETLSIDVLCSNNNLPNGLQIGSINEIVGYQ
Sbjct  361  GNDFYAISNKQDANGEHYKEISIYSNQSRRETLSIDVLCSNNNLPNGLQIGSINEIVGYQ  420

Query  421  DVLTRNLMLPTKSQHRSIDNATLWDFIATLSFNYQSITHKESFLALLHTYSFNIDKPKNL  480
            DVLTRNLMLPTKSQHRSIDNATLWDFIATLSFNYQSITHKESFLALLHTYSFNIDKPKNL
Sbjct  421  DVLTRNLMLPTKSQHRSIDNATLWDFIATLSFNYQSITHKESFLALLHTYSFNIDKPKNL  480

Query  481  YEIISESLQKIESKPAYNVNGFITLRGMQITLYIDDSKFYCLGEAYKIGLVLAHFFSSFV  540
            YEIISESLQKIESKPAYNVNGFITLRGMQITLYIDDSKFYCLGEAYKIGLVLAHFFSSFV
Sbjct  481  YEIISESLQKIESKPAYNVNGFITLRGMQITLYIDDSKFYCLGEAYKIGLVLAHFFSSFV  540

Query  541  SINSFCEVSLCCTTSNTSFSYSIIYGNKALL  571
            SINSFCEVSLCCTTSNTSFSYSIIYGNKALL
Sbjct  541  SINSFCEVSLCCTTSNTSFSYSIIYGNKALL  571

2) HCN_1423 in NC_017761


> NC_004917_P1|13|G13|32265744|NP_859776.1|Helicobacter_hepaticus_ATCC_51449|-|12924..14639|-|HH0245|hypothetical 
protein
Length=571

 Score =  466 bits (1758),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 274/571 (48%), Positives = 439/571 (77%), Gaps = 3/571 (0%)

Query  5    DVFYYQKELSYLYQTREYFVKKFPKLAPFLALDSKDPDIERIIENLAILTSKIHQEMEQN  64
            ++ Y++KEL YL + RE FV+K+PKLAPFL+ +S+DPD+ERIIE+LA+LTSKIH+E++ N
Sbjct  3    NIHYFRKELDYLHKMREIFVNKYPKLAPFLSHNSNDPDVERIIESLALLTSKIHEELDGN  62

Query  65   IPYIAESLLNVVSPNYTNPLPSLCMQEFLLNKDSKKNKIIVPKGSRLQSITIEQIECEFR  124
            IP IAESL+N+++PNYTN+LPS+C+Q+F L+ +SK  K+++P+ + L+S  I+Q++CEF+
Sbjct  63   IPLIAESLINILAPNYTNSLPSMCIQDFALKPESKECKVFIPRHTSLKSTPINQVQCEFK  122

Query  125  TIYDVYLYPLDIDEVFMSSEKQYHTMDLRLKVNKPDLKICDIGLDCLNLYLGDDIYTSAT  184
            TIYDV L PL I ++ +++E +     L +   +  +KI D++++ L++YLG ++Y++ T
Sbjct  123  TIYDVCLHPLKISDMSLTNEGKQSVFCLDIVSTNKFFKIADMDIHFLQIYLGSEVYSANT  182

Query  185  LLLFIHLYLEEVKIISCDTSEKFKLNSCNIKTIGLEPNESCLNYDDLGFEAFSLLREYFF  244
            LLL +  YL+E+ I+  DT   FK+   ++ T G++ NES ++ +D+GF AF+LL+E +F
Sbjct  183  LLLWLLCYLQEIVIVCADTLTSFKIPCDSLETTGFDKNESMFSNGDVGFSAFTLLQELLF  242

Query  245  IPEKFNFIRIQGLDILKDCQGSNLSIQFKFNKIFPKNCIVRADLFSLSITPIVNIFPKNA  304
            +PEKF F+RI+ L+ILK+CQ+ +++++F F+K +PK+ + +A+ FSL  TPIVN+F+ ++
Sbjct  243  LPEKFAFVRIKNLEILKECQSEKMTFKFIFKKELPKDTLPKANQFSLFSTPIVNLFSTQT  302

Query  305  ESIINDHTKDGYRIFVDRVHLDSYEIIKINQVKAHNSDSGRRILKNYKSFERFEFLKDNQ  364
            E+I+ DHT++GYRIF+DR HL++Y +I++ +VKAHNSDSGRRILKNY+SFERFEF+ D+ 
Sbjct  303  EPILTDHTRNGYRIFIDRAHLNAYSVIQVLKVKAHNSDSGRRILKNYNSFERFEFV-DKG  361

Query  365  NEFYSINVKKNSKGETYKEISFFSEHSYNEIITIDALCCNKNLPSKLKIGDIRHI-NFED  423
            N+FY+I+ K++++GE YKEIS++S++S  E ++ID LC N+NLP+ L+IG I +I  ++D
Sbjct  362  NDFYAISNKQDANGEHYKEISIYSNQSRRETLSIDVLCSNNNLPNGLQIGSINEIVGYQD  421

Query  424  ISTKNIKIPSMMREYSVDGHLLWKLVSILSFNYQSILNTTSFFGVLESYSFVNDKENEET  483
            + T+N+ +P+  ++ S+D   LW +++ LSFNYQSI +  SF+++L++YSF  DK + + 
Sbjct  422  VLTRNLMLPTKSQHRSIDNATLWDFIATLSFNYQSITHKESFLALLHTYSFNIDKPK-NL  480

Query  484  YKRLKNSIAYIESKSTYLVDEYITKKGTLCIMGIKDSNFYSLGEVYKLGLIISKFFASFV  543
            Y  + +S+  IESK++Y V+ +IT +G    + I DS+FY LGE YK+GL+++ FF+SFV
Sbjct  481  YEIISESLQKIESKPAYNVNGFITLRGMQITLYIDDSKFYCLGEAYKIGLVLAHFFSSFV  540

Query  544  SINSFCELKIKCLDSKEILYYPATRGKKVSL  574
            SINSFCE+ + C  S+  + Y+   G+K  L
Sbjct  541  SINSFCEVSLCCTTSNTSFSYSIIYGNKALL  571

3) HCBAA847_1595 in NC_020555


> NC_004917_P1|13|G13|32265744|NP_859776.1|Helicobacter_hepaticus_ATCC_51449|-|12924..14639|-|HH0245|hypothetical 
protein
Length=571

 Score =  466 bits (1756),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 274/571 (48%), Positives = 438/571 (77%), Gaps = 3/571 (0%)

Query  5    DVFYYQKELSYLYQTREYFVKKFPKLAPFLALDSKDPDIERIIENLAILTSKIHQEMEQN  64
            ++ Y++KEL YL + RE FV+K+PKLAPFL+ +S+DPD+ERIIE+LA+LTSKIH+E++ N
Sbjct  3    NIHYFRKELDYLHKMREIFVNKYPKLAPFLSHNSNDPDVERIIESLALLTSKIHEELDGN  62

Query  65   IPYIAESLLNVVSPNYTNPLPSLCMQEFLLNKDSKKNKIIVPKGSRLQSITIEQIECEFR  124
            IP IAESL+N+++PNYTN+LPS+C+Q+F L+ +SK  K+++P+ + L+S  I+Q++CEF+
Sbjct  63   IPLIAESLINILAPNYTNSLPSMCIQDFALKPESKECKVFIPRHTSLKSTPINQVQCEFK  122

Query  125  TIYDVYLYPLDIDEVFMSSEKQYHTMDLRLKVNKPDLKICDIGLDCLNLYLGDDIYTSAT  184
            TIYDV L PL I ++ +++E +     L +   +  +KI D++++ L++YLG ++Y++ T
Sbjct  123  TIYDVCLHPLKISDMSLTNEGKQSVFCLDIVSTNKFFKIADMDIHFLQIYLGSEVYSANT  182

Query  185  LLLFIHLYLEEVKIISCDTSEKFKLNSCNITTIGLEPNESCLNYDDLGFEAFSLLREYFF  244
            LLL +  YL+E+ I+  DT   FK+   ++ T G++ NES ++ +D+GF AF+LL+E +F
Sbjct  183  LLLWLLCYLQEIVIVCADTLTSFKIPCDSLETTGFDKNESMFSNGDVGFSAFTLLQELLF  242

Query  245  IPEKFNFIRIQGLDILKDCQGSNLSIQFKFNKIFPKNCIVRADLFSLSITPIVNIFPKNA  304
            +PEKF F+RI+ L+ILK+CQ+ +++++F F+K +PK+ + +A+ FSL  TPIVN+F+ ++
Sbjct  243  LPEKFAFVRIKNLEILKECQSEKMTFKFIFKKELPKDTLPKANQFSLFSTPIVNLFSTQT  302

Query  305  ESIINDHTKDGYRIFVDRVHLDSYEIIKINQVKAHNSDSGRRILKNYKSFERFEFLKDNQ  364
            E+I+ DHT++GYRIF+DR HL++Y +I++ +VKAHNSDSGRRILKNY+SFERFEF+ D+ 
Sbjct  303  EPILTDHTRNGYRIFIDRAHLNAYSVIQVLKVKAHNSDSGRRILKNYNSFERFEFV-DKG  361

Query  365  NEFYSINVKKNSKGETYKEISFFSGHSYNEIITIDALCCNKNLPSKLKIGDIRHI-NFED  423
            N+FY+I+ K++++GE YKEIS++S +S  E ++ID LC N+NLP+ L+IG I +I  ++D
Sbjct  362  NDFYAISNKQDANGEHYKEISIYSNQSRRETLSIDVLCSNNNLPNGLQIGSINEIVGYQD  421

Query  424  ISTKNIKIPSMMREYSVDGHLLWKLVSILSFNYQSILNTTSFFGVLESYSFVNDKENEET  483
            + T+N+ +P+  ++ S+D   LW +++ LSFNYQSI +  SF+++L++YSF  DK + + 
Sbjct  422  VLTRNLMLPTKSQHRSIDNATLWDFIATLSFNYQSITHKESFLALLHTYSFNIDKPK-NL  480

Query  484  YKRLKNSIAYIESKSTYLVDEYITKKGTLCIMGIKDSNFYSLGEVYKLGLIISKFFASFV  543
            Y  + +S+  IESK++Y V+ +IT +G    + I DS+FY LGE YK+GL+++ FF+SFV
Sbjct  481  YEIISESLQKIESKPAYNVNGFITLRGMQITLYIDDSKFYCLGEAYKIGLVLAHFFSSFV  540

Query  544  SINSFCELKIKCLDSKEILYYPATRGKKVSL  574
            SINSFCE+ + C  S+  + Y+   G+K  L
Sbjct  541  SINSFCEVSLCCTTSNTSFSYSIIYGNKALL  571