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Homologs of unnamed gene of AY597276

1038

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PputUW4_02106
( YP_007029114.1 )

short-chain dehydrogenase/reductase SDR

NC_019670
(Pseudomonas sp. UW4)

3e-98

2) Pfl01_2721
( YP_348452.1 )

Short-chain dehydrogenase/reductase SDR

NC_007492
(Pseudomonas fluorescens Pf0-1)

2e-91

3) PSEBR_a3040
( YP_004354350.1 )

3-oxoacyl-ACP reductase

NC_015379
(Pseudomonas brassicacearum NFM421)

6e-91

4) Psefu_3760
( YP_004475811.1 )

3-oxoacyl-ACP reductase

NC_015556
(Pseudomonas fulva 12-X)

5e-90

5) AOLE_14505
( YP_003733161.1 )

dehydrogenase

NC_014259
(Acinetobacter oleivorans DR1)

1e-89

6) ABD1_09210
( YP_007595472.1 )

putative 3-oxoacyl-[acyl-carrier protein] reductase

NC_020547
(Acinetobacter baumannii D1279779)

4e-89

7) y4mP
( YP_004994514.1 )

short-chain dehydrogenase/reductase SDR

NC_016603
(Acinetobacter calcoaceticus PHEA-2)

7e-89

8) AB57_1044
( YP_002318434.1 )

3-oxoacyl-ACP reductase

NC_011586
(Acinetobacter baumannii AB0057)

1e-88

9) ABBFA_002643
( YP_002326541.1 )

3-oxoacyl-[acyl-carrier-protein] reductase(3-ketoacyl-acyl carrier protein reductase)

NC_011595
(Acinetobacter baumannii AB307-0294)

1e-88

10) A1S_0967
( YP_001084001.1 )

short-chain type regulator dehydrogenase

NC_009085
(Acinetobacter baumannii ATCC 17978)

1e-88

11) ABAYE2826
( YP_001714629.1 )

3-oxoacyl-ACP reductase

NC_010410
(Acinetobacter baumannii AYE)

1e-88

12) ABK1_0953
( YP_005513525.1 )

Putative short-chain type regulator dehydrogenase

NC_017162
(Acinetobacter baumannii 1656-2)

1e-88

13) ACICU_00929
( YP_001845588.1 )

dehydrogenase

NC_010611
(Acinetobacter baumannii ACICU)

1e-88

14) BJAB07104_01064
( YP_008208527.1 )

Dehydrogenases with different specificities (

NC_021726
(Acinetobacter baumannii BJAB07104)

1e-88

15) BJAB0868_01078
( YP_008212403.1 )

Dehydrogenases with different specificities

NC_021729
(Acinetobacter baumannii BJAB0868)

1e-88

16) ABTJ_02843
( YP_006290729.1 )

dehydrogenase

NC_017847
(Acinetobacter baumannii MDR-TJ)

1e-88

17) ABZJ_01070
( YP_005525026.1 )

dehydrogenase

NC_017171
(Acinetobacter baumannii MDR-ZJ06)

1e-88

18) ABTW07_1058
( YP_005797954.1 )

dehydrogenase

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

1e-88

19) M3Q_1266
( YP_006847589.1 )

dehydrogenase

NC_018706
(Acinetobacter baumannii TYTH-1)

1e-88

20) fabG3
( YP_003730266.1 )

3-oxoacyl-ACP reductase

NC_014258
(Pantoea vagans C9-1)

2e-88

21) D781_2336
( YP_007344788.1 )

dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein

NC_020064
(Serratia marcescens FGI94)

3e-88

22) PSPPH_1258
( YP_273520.1 )

3-oxoacyl-ACP reductase

NC_005773
(Pseudomonas syringae 1448A)

4e-85

23) KPN_00827
( YP_001334493.1 )

putative short-chain dehydrogenase/reductase SDR

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

4e-84

24) ROD_07991
( YP_003364423.1 )

hypothetical protein

NC_013716
(Citrobacter rodentium ICC168)

3e-82

25) PCC21_021960
( YP_006646852.1 )

short-chain dehydrogenase/reductase SDR

NC_018525
(Pectobacterium carotovorum PCC21)

9e-80

26) Mnod_4381
( YP_002499555.1 )

short-chain dehydrogenase/reductase SDR

NC_011894
(Methylobacterium nodulans ORS 2060)

2e-79

27) M446_2746
( YP_001769618.1 )

short-chain dehydrogenase/reductase SDR

NC_010511
(Methylobacterium sp. 4-46)

3e-78

28) B479_17290
( YP_007230293.1 )

putative short-chain type regulator

NC_019905
(Pseudomonas putida PC9)

1e-77

29) PPS_3478
( YP_004702905.1 )

putative short-chain type regulator

NC_015733
(Pseudomonas putida S16)

1e-77

30) N559_3508
( YP_008426436.1 )

putative short-chain dehydrogenase/reductase SDR

NC_022082
(Klebsiella pneumoniae JM45)

1e-77

31) A79E_3415
( YP_006637207.1 )

3-oxoacyl-ACP reductase

NC_018522
(Klebsiella pneumoniae 1084)

4e-77

32) KPHS_16560
( YP_005225956.1 )

putative short-chain dehydrogenase/reductase SDR

NC_016845
(Klebsiella pneumoniae HS11286)

4e-77

33) KP1_1782
( YP_002918584.1 )

putative short-chain dehydrogenase/reductase SDR

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

4e-77

34) KPR_3761
( YP_007992736.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

4e-77

35) KPK_3744
( YP_002239563.1 )

short chain dehydrogenase/reductase family oxidoreductase

NC_011283
(Klebsiella pneumoniae 342)

5e-77

36) KPN2242_06945
( YP_005953872.1 )

putative short-chain dehydrogenase/reductase SDR

NC_017540
(Klebsiella pneumoniae KCTC 2242)

5e-77

37) Kvar_3554
( YP_003440466.1 )

short-chain dehydrogenase/reductase SDR

NC_013850
(Klebsiella variicola At-22)

5e-77

38) fabG
( YP_004953318.1 )

protein FabG

NC_016514
(Enterobacter cloacae EcWSU1)

8e-77

39) CNE_BB1p07950
( YP_004688248.1 )

short-chain dehydrogenase/reductase SDR

NC_015727
(Cupriavidus necator N-1)

4e-76

40) fabG
( YP_008260051.1 )

3-ketoacyl-ACP reductase

NC_021818
(Salmonella enterica CFSAN002050)

2e-75

41) SPAB_02690
( YP_001588901.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

3e-75

42) ECL_03994
( YP_003614477.1 )

putative short-chain dehydrogenase/reductase SDR

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-74

43) A3UG_17515
( YP_006478925.1 )

putative short-chain dehydrogenase/reductase SDR

NC_018079
(Enterobacter cloacae SDM)

8e-75

44) Hsero_1109
( YP_003774534.1 )

dehydrogenase

NC_014323
(Herbaspirillum seropedicae SmR1)

2e-74

45) A225_1839
( YP_006497569.1 )

3-oxoacyl-ACP reductase

NC_018106
(Klebsiella oxytoca E718)

7e-74

46) KOX_15055
( YP_005018974.1 )

short-chain dehydrogenase/reductase SDR

NC_016612
(Klebsiella oxytoca KCTC 1686)

7e-74

47) mll5766
( NP_106368.1 )

short-chain type dehydrogenase/reductase

NC_002678
(Mesorhizobium loti MAFF303099)

1e-73

48) AZKH_p0610
( YP_007598550.1 )

short-chain dehydrogenase/reductase SDR

NC_020548
(Azoarcus sp. KH32C)

2e-73

49) Dda3937_00379
( YP_003882485.1 )

3-oxoacyl-ACP reductase

NC_014500
(Dickeya dadantii 3937)

3e-73

50) Daci_0732
( YP_001561763.1 )

short-chain dehydrogenase/reductase SDR

NC_010002
(Delftia acidovorans SPH-1)

5e-73

51) DelCs14_5805
( YP_004491129.1 )

3-oxoacyl-ACP reductase

NC_015563
(Delftia sp. Cs1-4)

5e-73

52) Mpop_0259
( YP_001922979.1 )

short-chain dehydrogenase/reductase SDR

NC_010725
(Methylobacterium populi BJ001)

4e-71

53) NH8B_2713
( YP_004847925.1 )

short-chain dehydrogenase/reductase SDR

NC_016002
(Pseudogulbenkiania sp. NH8B)

4e-71

54) Mrad2831_3001
( YP_001755668.1 )

short-chain dehydrogenase/reductase SDR

NC_010505
(Methylobacterium radiotolerans JCM 2831)

5e-71

55) Bpro_1454
( YP_548300.1 )

short-chain dehydrogenase/reductase SDR

NC_007948
(Polaromonas sp. JS666)

1e-70

56) MexAM1_META1p2077
( YP_002963153.1 )

3-oxoacyl-ACP reductase

NC_012808
(Methylobacterium extorquens AM1)

3e-70

57) PT7_3271
( YP_004418435.1 )

3-ketoacyl-ACP reductase

NC_015458
(Pusillimonas sp. T7-7)

4e-70

58) Mext_2090
( YP_001639557.1 )

short-chain dehydrogenase/reductase SDR

NC_010172
(Methylobacterium extorquens PA1)

5e-70

59) Mchl_2365
( YP_002421138.1 )

short-chain dehydrogenase/reductase SDR

NC_011757
(Methylobacterium chloromethanicum CM4)

8e-70

60) fabG
( YP_003773938.1 )

3-oxoacyl-ACP reductase

NC_014323
(Herbaspirillum seropedicae SmR1)

2e-69

61) YSA_04978
( YP_006386578.1 )

Short-chain dehydrogenase/reductase

NC_017986
(Pseudomonas putida ND6)

3e-69

62) METDI2857
( YP_003068373.1 )

3-oxoacyl-ACP reductase

NC_012988
(Methylobacterium extorquens DM4)

4e-69

63) PPUBIRD1_0040
( YP_005927955.1 )

short-chain dehydrogenase

NC_017530
(Pseudomonas putida BIRD-1)

5e-69

64) Pput_5278
( YP_001270580.1 )

short-chain dehydrogenase/reductase SDR

NC_009512
(Pseudomonas putida F1)

9e-69

65) BYI23_D007430
( YP_005043776.1 )

short-chain dehydrogenase/reductase

NC_016626
(Burkholderia sp. YI23)

9e-69

66) Lcho_0404
( YP_001789444.1 )

short-chain dehydrogenase/reductase SDR

NC_010524
(Leptothrix cholodnii SP-6)

3e-67

67) BRPE64_DCDS04570
( YP_008040367.1 )

short-chain dehydrogenase/reductase SDR

NC_021289
(Burkholderia sp. RPE64)

4e-67

68) Acry_0716
( YP_001233856.1 )

short-chain dehydrogenase/reductase SDR

NC_009484
(Acidiphilium cryptum JF-5)

2e-66

69) ACMV_11560
( YP_004283385.1 )

putative oxidoreductase

NC_015186
(Acidiphilium multivorum AIU301)

2e-66

70) BRADO4765
( YP_001206709.1 )

short chain dehydrogenase/reductase

NC_009445
(Bradyrhizobium sp. ORS278)

5e-66

71) SMc00268
( NP_385802.1 )

oxidoreductase

NC_003047
(Sinorhizobium meliloti 1021)

5e-66

72) SinmeB_1445
( YP_005713607.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017322
(Sinorhizobium meliloti BL225C)

5e-66

73) C770_GR4Chr1738
( YP_007190278.1 )

Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

NC_019845
(Sinorhizobium meliloti GR4)

5e-66

74) SM11_chr1709
( YP_005720239.1 )

dehydrogenase

NC_017325
(Sinorhizobium meliloti SM11)

5e-66

75) Alide2_2567
( YP_004388440.1 )

3-oxoacyl-ACP reductase

NC_015422
(Alicycliphilus denitrificans K601)

6e-66

76) fabG
( YP_004986151.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_016595
(Azospirillum brasilense Sp245)

7e-66

77) SM2011_c00268
( YP_007574965.1 )

Dehydrogenase

NC_020528
(Sinorhizobium meliloti 2011)

7e-66

78) NGR_a02430
( NP_443982.1 )

short chain dehydrogenase/reductase

NC_000914
(Sinorhizobium fredii NGR234)

2e-65

79) Lcho_4270
( YP_001793286.1 )

short-chain dehydrogenase/reductase SDR

NC_010524
(Leptothrix cholodnii SP-6)

3e-65

80) BJ6T_76850
( YP_005612518.1 )

oxidoreductase

NC_017249
(Bradyrhizobium japonicum USDA 6)

6e-65

81) OAN307_c00610
( YP_007702471.1 )

putative short-chain dehydrogenase/reductase

NC_020911
(Octadecabacter antarcticus 307)

2e-64

82) Alide_2373
( YP_004126995.1 )

short-chain dehydrogenase/reductase sdr

NC_014910
(Alicycliphilus denitrificans BC)

2e-64

83) fabG
( YP_003450541.1 )

3-oxoacyl-ACP reductase

NC_013855
(Azospirillum sp. B510)

3e-64

84) blr2167
( NP_768807.1 )

oxidoreductase

NC_004463
(Bradyrhizobium japonicum USDA 110)

5e-64

85) fabG2
( YP_004973700.1 )

3-oxoacyl-ACP reductase

NC_016585
(Azospirillum lipoferum 4B)

9e-64

86) REMIM1_PF00272
( YP_008368868.1 )

3-oxoacyl-(acyl-carrier-protein) reductase protein

NC_021911
(Rhizobium etli Mim1)

7e-63

87) Bphy_5875
( YP_001861985.1 )

short-chain dehydrogenase/reductase SDR

NC_010625
(Burkholderia phymatum STM815)

1e-62

88) MDS_1708
( YP_004379491.1 )

short-chain dehydrogenase/reductase SDR

NC_015410
(Pseudomonas mendocina NK-01)

1e-62

89) RHECIAT_PC0000768
( YP_001985391.1 )

putative short chain dehydrogenase/reductase

NC_010997
(Rhizobium etli CIAT 652)

1e-61

90) Xaut_1541
( YP_001416446.1 )

short-chain dehydrogenase/reductase SDR

NC_009720
(Xanthobacter autotrophicus Py2)

3e-60

91) BBta_3267
( YP_001239278.1 )

short chain dehydrogenase/reductase

NC_009485
(Bradyrhizobium sp. BTAi1)

1e-58

92) fabG1
( YP_004974558.1 )

3-oxoacyl-ACP reductase

NC_016586
(Azospirillum lipoferum 4B)

6e-58

93) Gobs_1718
( YP_003408803.1 )

short-chain dehydrogenase/reductase SDR

NC_013757
(Geodermatophilus obscurus DSM 43160)

3e-49

94) MY9_2663
( YP_006232452.1 )

short chain dehydrogenase

NC_017743
(Bacillus sp. JS)

2e-48

95) BSn5_04075
( YP_004204472.1 )

short chain dehydrogenase

NC_014976
(Bacillus subtilis BSn5)

2e-48

96) BSUW23_12920
( YP_003866931.1 )

short chain dehydrogenase

NC_014479
(Bacillus subtilis W23)

8e-48

97) B1NLA3E_07275
( YP_007909716.1 )

short chain dehydrogenase

NC_021171
(Bacillus sp. 1NLA3E)

4e-47

98) SACE_4767
( YP_001106960.1 )

short-chain dehydrogenase/reductase SDR

NC_009142
(Saccharopolyspora erythraea NRRL 2338)

4e-46

99) Lcho_0824
( YP_001789861.1 )

short-chain dehydrogenase/reductase SDR

NC_010524
(Leptothrix cholodnii SP-6)

4e-44

100) KNP414_03122
( YP_004641550.1 )

oxidoreductase protein

NC_015690
(Paenibacillus mucilaginosus KNP414)

1e-42

101) PM3016_3349
( YP_005313343.1 )

putative oxidoreductase protein

NC_016935
(Paenibacillus mucilaginosus 3016)

2e-42

102) B2K_17350
( YP_006190229.1 )

oxidoreductase

NC_017672
(Paenibacillus mucilaginosus K02)

2e-42

103) Calkr_1139
( YP_004026260.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

8e-42

104) Asphe3_20030
( YP_004241292.1 )

dehydrogenase

NC_015145
(Arthrobacter phenanthrenivorans Sphe3)

1e-41

105) Athe_1156
( YP_002573030.1 )

3-oxoacyl-ACP reductase

NC_012034
(Caldicellulosiruptor bescii DSM 6725)

1e-41

106) Calla_0568
( YP_004798199.1 )

3-oxoacyl-ACP reductase

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

1e-41

107) COB47_1376
( YP_003840652.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

2e-41

108) Calhy_1578
( YP_003992663.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014652
(Caldicellulosiruptor hydrothermalis 108)

4e-41

109) Calow_0969
( YP_004002335.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014657
(Caldicellulosiruptor owensensis OL)

5e-41

110) Calkro_1540
( YP_004024214.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014720
(Caldicellulosiruptor kronotskyensis 2002)

9e-41

111) BMQ_1645
( YP_003562110.1 )

short chain dehydrogenase

NC_014019
(Bacillus megaterium QM B1551)

1e-40

112) TherJR_2074
( YP_003640820.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014152
(Thermincola potens JR)

2e-40

113) AciPR4_0689
( YP_004181516.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014963
(Terriglobus saanensis SP1PR4)

2e-40

114) M493_17165
( REF_PRJNA208285:M493 )

oxidoreductase

NC_022080
(Geobacillus sp. JF8)

3e-40

115) yxbG
( YP_007401970.1 )

short chain dehydrogenase

NC_020210
(Geobacillus sp. GHH01)

3e-40

116) Ilyop_1509
( YP_003967637.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014632
(Ilyobacter polytropus DSM 2926)

4e-40

117) CCALI_00238
( YP_008088218.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_021487
(Chthonomonas calidirosea T49)

5e-40

118) ZPR_2378
( YP_003584898.1 )

3-oxoacyl-ACP reductase

NC_014041
(Zunongwangia profunda SMA-87)

1e-39

119) Palpr_0380
( YP_004041526.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014734
(Paludibacter propionicigenes WB4)

7e-40

120) KTR9_1095
( YP_006667893.1 )

short-chain dehydorgenase/reductase

NC_018581
(Gordonia sp. KTR9)

2e-39

121) fabG
( YP_008067709.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021351
(Corynebacterium glutamicum SCgG1)

2e-39

122) fabG
( YP_008070734.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021352
(Corynebacterium glutamicum SCgG2)

2e-39

123) M493_08660
( REF_PRJNA208285:M493 )

short-chain dehydrogenase

NC_022080
(Geobacillus sp. JF8)

2e-39

124) fabG
( YP_003465022.1 )

3-oxoacyl-ACP reductase

NC_013891
(Listeria seeligeri SLCC3954)

2e-39

125) BDI_1496
( YP_001302874.1 )

3-oxoacyl-ACP reductase

NC_009615
(Parabacteroides distasonis ATCC 8503)

2e-39

126) Clole_3051
( YP_004309945.1 )

3-oxoacyl-ACP reductase

NC_015275
(Clostridium lentocellum DSM 5427)

3e-39

127) AL1_05010
( YP_007815902.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_021030
(Alistipes shahii WAL 8301)

4e-39

128) fabG
( YP_004855532.1 )

putative 3-ketoacyl-acyl carrier protein reductase

NC_016011
(Listeria ivanovii PAM 55)

4e-39

129) Clos_0257
( YP_001511816.1 )

short-chain dehydrogenase/reductase SDR

NC_009922
(Alkaliphilus oremlandii OhILAs)

4e-39

130) lin1921
( NP_471255.1 )

hypothetical protein

NC_003212
(Listeria innocua Clip11262)

5e-39

131) LMRG_00954
( YP_005962921.1 )

3-oxoacyl-ACP reductase

NC_017544
(Listeria monocytogenes 10403S)

5e-39

132) fabG
( NP_465332.1 )

3-ketoacyl-ACP reductase

NC_003210
(Listeria monocytogenes EGD-e)

5e-39

133) LMKG_00531
( YP_005968775.1 )

3-oxoacyl-ACP reductase

NC_017546
(Listeria monocytogenes FSL R2-561)

5e-39

134) fabG
( YP_002349718.1 )

3-oxoacyl-ACP reductase

NC_011660
(Listeria monocytogenes HCC23)

5e-39

135) fabG
( YP_005926857.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017529
(Listeria monocytogenes L99)

5e-39

136) BN418_2172
( YP_007604233.1 )

3-oxoacyl-[acyl-carrier-protein] reductase FabG

NC_020557
(Listeria monocytogenes La111)

5e-39

137) fabG
( YP_005947963.1 )

3-oxoacyl-ACP reductase

NC_017537
(Listeria monocytogenes M7)

5e-39

138) BN419_2171
( YP_007607363.1 )

3-oxoacyl-[acyl-carrier-protein] reductase FabG

NC_020558
(Listeria monocytogenes N53-1)

5e-39

139) fabG
( YP_006685200.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018588
(Listeria monocytogenes SLCC2372)

5e-39

140) fabG
( YP_006688134.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018589
(Listeria monocytogenes SLCC2479)

5e-39

141) fabG
( YP_006696696.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018592
(Listeria monocytogenes SLCC5850)

5e-39

142) MUO_09280
( YP_006206043.1 )

3-oxoacyl-ACP reductase

NC_017728
(Listeria monocytogenes 07PF0776)

6e-39

143) LM5578_2009
( YP_003414118.1 )

3-oxoacyl-ACP reductase

NC_013766
(Listeria monocytogenes 08-5578)

6e-39

144) LM5923_1960
( YP_003417163.1 )

3-oxoacyl-ACP reductase

NC_013768
(Listeria monocytogenes 08-5923)

6e-39

145) fabG
( YP_006673625.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018584
(Listeria monocytogenes ATCC 19117)

6e-39

146) M642_07130
( YP_008272261.1 )

3-ketoacyl-ACP reductase

NC_021823
(Listeria monocytogenes C1-387)

6e-39

147) fabG
( YP_002758517.1 )

3-ketoacyl-acyl carrier protein reductase

NC_012488
(Listeria monocytogenes Clip81459)

6e-39

148) fabG
( YP_014428.1 )

3-oxoacyl-ACP reductase

NC_002973
(Listeria monocytogenes F2365)

6e-39

149) LMLG_2050
( YP_005971620.1 )

3-oxoacyl-ACP reductase

NC_017547
(Listeria monocytogenes Finland 1988)

6e-39

150) LMOG_01433
( YP_005965792.1 )

3-oxoacyl-ACP reductase

NC_017545
(Listeria monocytogenes J0161)

6e-39

151) LM220_09020
( YP_008290057.1 )

3-ketoacyl-ACP reductase

NC_021830
(Listeria monocytogenes J1-220)

6e-39

152) M640_08140
( YP_008302146.1 )

3-ketoacyl-ACP reductase

NC_021839
(Listeria monocytogenes J1776)

6e-39

153) LM1816_11202
( YP_008287747.1 )

3-ketoacyl-ACP reductase

NC_021829
(Listeria monocytogenes J1816)

6e-39

154) M644_06780
( YP_008283976.1 )

3-ketoacyl-ACP reductase

NC_021827
(Listeria monocytogenes J1817)

6e-39

155) M645_14820
( YP_008306328.1 )

3-ketoacyl-ACP reductase

NC_021840
(Listeria monocytogenes J1926)

6e-39

156) M639_08140
( YP_008296218.1 )

3-ketoacyl-ACP reductase

NC_021837
(Listeria monocytogenes J2-031)

6e-39

157) M637_12155
( YP_008276196.1 )

3-ketoacyl-ACP reductase

NC_021824
(Listeria monocytogenes J2-064)

6e-39

158) M638_11900
( YP_008278991.1 )

3-ketoacyl-ACP reductase

NC_021825
(Listeria monocytogenes J2-1091)

6e-39

159) fabG
( YP_006754945.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018642
(Listeria monocytogenes L312)

6e-39

160) fabG
( YP_007015398.1 )

3-oxoacyl-[acyl-carrier-protein] reductase FabG

NC_019556
(Listeria monocytogenes LL195)

6e-39

161) M643_04360
( YP_008280435.1 )

3-ketoacyl-ACP reductase

NC_021826
(Listeria monocytogenes N1-011A)

6e-39

162) M641_12920
( YP_008300068.1 )

3-ketoacyl-ACP reductase

NC_021838
(Listeria monocytogenes R2-502)

6e-39

163) fabG
( YP_006690966.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018590
(Listeria monocytogenes SLCC2376)

6e-39

164) fabG
( YP_006676499.1 )

3-oxoacyl-ACP reductase

NC_018585
(Listeria monocytogenes SLCC2378)

6e-39

165) fabG
( YP_006693822.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018591
(Listeria monocytogenes SLCC2482)

6e-39

166) fabG
( YP_006679432.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018586
(Listeria monocytogenes SLCC2540)

6e-39

167) fabG
( YP_006682318.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018587
(Listeria monocytogenes SLCC2755)

6e-39

168) fabG
( YP_006699473.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018593
(Listeria monocytogenes SLCC7179)

6e-39

169) Pnuc_0214
( YP_001154999.1 )

short-chain dehydrogenase/reductase SDR

NC_009379
(Polynucleobacter necessarius QLW-P1DMWA-1)

7e-39

170) Arth_3954
( YP_833429.1 )

short-chain dehydrogenase/reductase SDR

NC_008541
(Arthrobacter sp. FB24)

1e-38

171) Krodi_2550
( YP_004431795.1 )

3-oxoacyl-ACP reductase

NC_015496
(Krokinobacter sp. 4H-3-7-5)

1e-38

172) Mycsm_02092
( YP_007291858.1 )

dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein

NC_019966
(Mycobacterium smegmatis JS623)

1e-38

173) AAur_1105
( YP_946893.1 )

short chain dehydrogenase/reductase family oxidoreductase

NC_008711
(Arthrobacter aurescens TC1)

1e-38

174) ARUE_c10580
( YP_006661017.1 )

short-chain type dehydrogenase/reductase

NC_018531
(Arthrobacter sp. Rue61a)

1e-38

175) Tola_2192
( YP_002893377.1 )

3-oxoacyl-ACP reductase

NC_012691
(Tolumonas auensis DSM 9187)

1e-38

176) Alfi_3068
( YP_006411994.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018011
(Alistipes finegoldii DSM 17242)

2e-38

177) NT01EI_2369
( YP_002933775.1 )

3-oxoacyl-(acyl-carrier-protein) reductase, putative

NC_012779
(Edwardsiella ictaluri 93-146)

2e-38

178) fabG
( YP_147043.1 )

3-ketoacyl-ACP reductase

NC_006510
(Geobacillus kaustophilus HTA426)

2e-38

179) GYMC52_1645
( YP_004132225.1 )

short-chain dehydrogenase/reductase SDR

NC_014915
(Geobacillus sp. Y412MC52)

2e-38

180) GYMC61_2515
( YP_003253592.1 )

short-chain dehydrogenase/reductase SDR

NC_013411
(Geobacillus sp. Y412MC61)

2e-38

181) GTNG_1527
( YP_001125642.1 )

short-chain dehydrogenase

NC_009328
(Geobacillus thermodenitrificans NG80-2)

2e-38

182) FP0964
( YP_001295872.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_009613
(Flavobacterium psychrophilum JIP02/86)

9e-39

183) fabG
( YP_850023.1 )

3-oxoacyl-ACP reductase

NC_008555
(Listeria welshimeri SLCC5334)

9e-39

184) AZOBR_p410035
( YP_004986904.1 )

putative short-chain dehydrogenase; putative 3-oxoacyl-[acyl-carrier-protein] reductase

NC_016596
(Azospirillum brasilense Sp245)

9e-39

185) MYSTI_05228
( YP_007362193.1 )

3-oxoacyl-ACP reductase

NC_020126
(Myxococcus stipitatus DSM 14675)

2e-38

186) Aeqsu_2655
( YP_006419123.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018013
(Aequorivita sublithincola DSM 14238)

2e-38

187) GK1683
( YP_147536.1 )

short chain dehydrogenase

NC_006510
(Geobacillus kaustophilus HTA426)

2e-38

188) GTCCBUS3UF5_19440
( YP_004982353.1 )

short-chain dehydrogenase

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

2e-38

189) B1NLA3E_04220
( YP_007909119.1 )

short-chain dehydrogenase

NC_021171
(Bacillus sp. 1NLA3E)

3e-38

190) GC56T3_1835
( YP_003671404.1 )

short-chain dehydrogenase/reductase SDR

NC_014206
(Geobacillus sp. C56-T3)

3e-38

191) fabG
( YP_002722799.1 )

3-oxoacyl-ACP (acyl carrier protein) reductase

NC_012225
(Brachyspira hyodysenteriae WA1)

4e-38

192) fabG
( YP_884206.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_008595
(Mycobacterium avium 104)

4e-38

193) Noca_4297
( YP_925481.1 )

short-chain dehydrogenase/reductase SDR

NC_008699
(Nocardioides sp. JS614)

4e-38

194) Csac_1605
( YP_001180388.1 )

3-oxoacyl-ACP reductase

NC_009437
(Caldicellulosiruptor saccharolyticus DSM 8903)

4e-38

195) fabG
( YP_007378033.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_020156
(Nonlabens dokdonensis DSW-6)

5e-38

196) MycrhN_6081
( YP_005003758.1 )

dehydrogenase

NC_016604
(Mycobacterium rhodesiae NBB3)

5e-38

197) M493_06045
( REF_PRJNA208285:M493 )

3-ketoacyl-ACP reductase

NC_022080
(Geobacillus sp. JF8)

5e-38

198) Arth_0887
( YP_830385.1 )

short-chain dehydrogenase/reductase SDR

NC_008541
(Arthrobacter sp. FB24)

7e-38

199) fabG
( YP_003573684.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_014033
(Prevotella ruminicola 23)

1e-37

200) Lacal_2426
( YP_004580696.1 )

3-oxoacyl-ACP reductase

NC_015638
(Lacinutrix sp. 5H-3-7-4)

1e-37

201) fabG
( YP_004327917.1 )

3-oxoacyl-ACP reductase

NC_015311
(Prevotella denticola F0289)

1e-37

202) fabG_2
( YP_005015025.1 )

3-oxoacyl-ACP reductase

NC_016610
(Tannerella forsythia ATCC 43037)

1e-37

203) fabG
( YP_001125164.1 )

3-ketoacyl-ACP reductase

NC_009328
(Geobacillus thermodenitrificans NG80-2)

1e-37

204) GYMC10_6087
( YP_003246099.1 )

short-chain dehydrogenase/reductase SDR

NC_013406
(Paenibacillus sp. Y412MC10)

8e-38

205) fabG
( YP_005863492.1 )

3-oxoacyl-ACP reductase

NC_017481
(Lactobacillus salivarius CECT 5713)

8e-38

206) Namu_3349
( YP_003202666.1 )

short-chain dehydrogenase/reductase SDR

NC_013235
(Nakamurella multipartita DSM 44233)

2e-37

207) Coch_1503
( YP_003141610.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_013162
(Capnocytophaga ochracea DSM 7271)

2e-37

208) fabG2
( YP_007401404.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_020210
(Geobacillus sp. GHH01)

2e-37

209) GYMC52_1095
( YP_004131705.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014915
(Geobacillus sp. Y412MC52)

2e-37

210) fabG
( YP_003253071.1 )

3-ketoacyl-ACP reductase

NC_013411
(Geobacillus sp. Y412MC61)

2e-37

211) fabG
( YP_001852295.1 )

3-ketoacyl-ACP reductase

NC_010612
(Mycobacterium marinum M)

2e-37

212) fabG
( YP_006095474.1 )

3-oxoacyl-ACP reductase

NC_017626
(Escherichia coli 042)

2e-37

213) fabG
( YP_003233858.1 )

3-oxoacyl-ACP reductase

NC_013364
(Escherichia coli 11128)

2e-37

214) fabG
( YP_003228467.1 )

3-ketoacyl-ACP reductase

NC_013361
(Escherichia coli 11368)

2e-37

215) fabG
( YP_003221111.1 )

3-oxoacyl-ACP reductase

NC_013353
(Escherichia coli 12009)

2e-37

216) fabG
( YP_006770647.1 )

3-ketoacyl-ACP reductase

NC_018650
(Escherichia coli 2009EL-2050)

2e-37

217) fabG
( YP_006784837.1 )

3-ketoacyl-ACP reductase

NC_018661
(Escherichia coli 2009EL-2071)

2e-37

218) fabG
( YP_006779698.1 )

3-ketoacyl-ACP reductase

NC_018658
(Escherichia coli 2011C-3493)

2e-37

219) fabG
( YP_668999.1 )

3-ketoacyl-ACP reductase

NC_008253
(Escherichia coli 536)

2e-37

220) fabG
( YP_002402293.1 )

3-ketoacyl-ACP reductase

NC_011748
(Escherichia coli 55989)

2e-37

221) fabG
( YP_006105400.1 )

3-oxoacyl-ACP reductase

NC_017631
(Escherichia coli ABU 83972)

2e-37

222) fabG
( YP_852191.1 )

3-ketoacyl-ACP reductase

NC_008563
(Escherichia coli APEC O1)

2e-37

223) fabG
( YP_007381060.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020163
(Escherichia coli APEC O78)

2e-37

224) fabG
( YP_001725466.1 )

3-ketoacyl-ACP reductase

NC_010468
(Escherichia coli ATCC 8739)

2e-37

225) fabG
( YP_003498931.1 )

3-oxoacyl-ACP reductase

NC_013941
(Escherichia coli CB9615)

2e-37

226) fabG
( YP_006143277.1 )

3-oxoacyl-ACP reductase

NC_017646
(Escherichia coli CE10)

2e-37

227) i14_1247
( YP_006153371.1 )

gluconate 5-dehydrogenase

NC_017652
(Escherichia coli clone D i14)

2e-37

228) i02_1247
( YP_006148452.1 )

gluconate 5-dehydrogenase

NC_017651
(Escherichia coli clone D i2)

2e-37

229) EcDH1_2554
( YP_006092479.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017625
(Escherichia coli DH1)

2e-37

230) fabG
( YP_006128429.1 )

3-oxoacyl-ACP reductase

NC_017638
(Escherichia coli DH1)

2e-37

231) fabG
( YP_002328735.1 )

3-ketoacyl-ACP reductase

NC_011601
(Escherichia coli E2348/69)

2e-37

232) fabG
( YP_001462325.1 )

3-ketoacyl-ACP reductase

NC_009801
(Escherichia coli E24377A)

2e-37

233) fabG
( YP_002397257.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_011745
(Escherichia coli ED1a)

2e-37

234) ETEC_1158
( YP_006114745.1 )

3-oxoacyl-ACP reductase

NC_017633
(Escherichia coli ETEC H10407)

2e-37

235) fabG
( YP_001457937.1 )

3-ketoacyl-ACP reductase

NC_009800
(Escherichia coli HS)

2e-37

236) fabG
( YP_002386583.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_011741
(Escherichia coli IAI1)

2e-37

237) fabG
( YP_002408033.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_011750
(Escherichia coli IAI39)

2e-37

238) fabG
( YP_006100406.1 )

3-oxoacyl-ACP reductase

NC_017628
(Escherichia coli IHE3034)

2e-37

239) fabG
( YP_001730064.1 )

3-ketoacyl-ACP reductase

NC_010473
(Escherichia coli K-12)

2e-37

240) fabG
( YP_002926143.1 )

3-ketoacyl-ACP reductase

NC_012759
(Escherichia coli K-12)

2e-37

241) fabG
( YP_007556586.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_020518
(Escherichia coli K-12)

2e-37

242) fabG
( YP_489361.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_007779
(Escherichia coli K-12)

2e-37

243) fabG
( NP_415611.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_000913
(Escherichia coli K12)

2e-37

244) EKO11_2741
( YP_005278401.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_016902
(Escherichia coli KO11FL)

2e-37

245) fabG
( YP_006165772.1 )

3-ketoacyl-ACP reductase

NC_017660
(Escherichia coli KO11FL)

2e-37

246) fabG
( YP_002555980.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_011993
(Escherichia coli LF82)

2e-37

247) fabG
( YP_008564250.1 )

3-ketoacyl-ACP reductase

NC_022364
(Escherichia coli LY180)

2e-37

248) fabG
( YP_006138248.1 )

3-oxoacyl-ACP reductase

NC_017644
(Escherichia coli NA114)

2e-37

249) fabG
( YP_006119416.1 )

3-ketoacyl-ACP reductase

NC_017634
(Escherichia coli NRG 857C)

2e-37

250) fabG
( YP_006169033.1 )

3-oxoacyl-ACP reductase

NC_017663
(Escherichia coli P12b)

2e-37

251) fabG_1
( YP_008571053.1 )

3-oxoacyl-[acyl-carrier-protein] reductase FabG

NC_022370
(Escherichia coli PMV-1)

2e-37

252) fabG
( YP_006158478.1 )

3-ketoacyl-ACP reductase

NC_017656
(Escherichia coli RM12579)

2e-37

253) fabG
( YP_002390887.1 )

3-ketoacyl-ACP reductase

NC_011742
(Escherichia coli S88)

2e-37

254) fabG
( YP_002292432.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_011415
(Escherichia coli SE11)

2e-37

255) ECSF_0992
( YP_003348982.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_013654
(Escherichia coli SE15)

2e-37

256) fabG
( YP_001744086.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_010498
(Escherichia coli SMS-3-5)

2e-37

257) fabG
( YP_006111253.1 )

3-ketoacyl-ACP reductase

NC_017632
(Escherichia coli UM146)

2e-37

258) fabG
( YP_002412021.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_011751
(Escherichia coli UMN026)

2e-37

259) fabG
( YP_006133138.1 )

3-oxoacyl-(acyl-carrier-protein) reductase FabG

NC_017641
(Escherichia coli UMNK88)

2e-37

260) fabG
( YP_540231.1 )

3-ketoacyl-ACP reductase

NC_007946
(Escherichia coli UTI89)

2e-37

261) fabG
( YP_006123939.1 )

3-oxoacyl-ACP reductase

NC_017635
(Escherichia coli W)

2e-37

262) fabG
( YP_006172623.1 )

3-ketoacyl-ACP reductase

NC_017664
(Escherichia coli W)

2e-37

263) GTCCBUS3UF5_13790
( YP_004981792.1 )

3-oxoacyl-ACP reductase

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

2e-37

264) fabG
( YP_001588544.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-37

265) fabG
( YP_001880737.1 )

3-ketoacyl-ACP reductase

NC_010658
(Shigella boydii CDC 3083-94)

2e-37

266) fabG
( YP_408388.1 )

3-ketoacyl-ACP reductase

NC_007613
(Shigella boydii Sb227)

2e-37

267) fabG
( YP_005726786.1 )

3-oxoacyl-ACP reductase

NC_017328
(Shigella flexneri 2002017)

2e-37

268) fabG
( NP_836798.1 )

3-ketoacyl-ACP reductase

NC_004741
(Shigella flexneri 2457T)

2e-37

269) fabG
( NP_707009.1 )

3-ketoacyl-ACP reductase

NC_004337
(Shigella flexneri 301)

2e-37

270) fabG
( YP_688627.1 )

3-ketoacyl-ACP reductase

NC_008258
(Shigella flexneri 8401)

2e-37

271) fabG
( YP_005455755.1 )

3-ketoacyl-ACP reductase

NC_016822
(Shigella sonnei 53G)

2e-37

272) fabG
( YP_310073.1 )

3-ketoacyl-ACP reductase

NC_007384
(Shigella sonnei Ss046)

2e-37

273) fabG
( YP_003955212.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014623
(Stigmatella aurantiaca DW4/3-1)

2e-37

274) fabG2
( YP_002794701.1 )

3-ketoacyl-ACP reductase

NC_012559
(Laribacter hongkongensis HLHK9)

3e-37

275) Pse7367_0369
( YP_007101108.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019701
(Pseudanabaena sp. PCC 7367)

3e-37

276) ARUE_c42620
( YP_006664172.1 )

short-chain type dehydrogenase/reductase

NC_018531
(Arthrobacter sp. Rue61a)

3e-37

277) fabG
( NP_243357.1 )

3-oxoacyl-ACP reductase

NC_002570
(Bacillus halodurans C-125)

3e-37

278) MULP_04198
( YP_007370289.1 )

short chain dehydrogenase

NC_020133
(Mycobacterium liflandii 128FXT)

3e-37

279) Selsp_1727
( YP_004414142.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_015437
(Selenomonas sputigena ATCC 35185)

3e-37

280) GC56T3_2363
( YP_003671909.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014206
(Geobacillus sp. C56-T3)

3e-37

281) fabG
( YP_008094620.1 )

3-ketoacyl-ACP reductase

NC_021491
(Pseudomonas putida H8234)

3e-37

282) fabG
( YP_535347.1 )

3-ketoacyl-ACP reductase

NC_007929
(Lactobacillus salivarius UCC118)

3e-37

283) Poras_1696
( YP_004442795.1 )

3-oxoacyl-ACP reductase

NC_015501
(Porphyromonas asaccharolytica DSM 20707)

4e-37

284) Ccan_14700
( YP_004740693.1 )

3-ketoacyl-acyl carrier protein reductase

NC_015846
(Capnocytophaga canimorsus Cc5)

5e-37

285) fabG
( NP_296885.1 )

3-oxoacyl-(acyl carrier protein) reductase

NC_002620
(Chlamydia muridarum Nigg)

5e-37

286) fabG
( YP_002269937.1 )

3-ketoacyl-ACP reductase

NC_011353
(Escherichia coli EC4115)

5e-37

287) fabG
( NP_287227.1 )

3-ketoacyl-ACP reductase

NC_002655
(Escherichia coli EDL933)

5e-37

288) fabG
( NP_309498.1 )

3-ketoacyl-ACP reductase

NC_002695
(Escherichia coli Sakai)

5e-37

289) fabG
( YP_003077312.1 )

3-ketoacyl-ACP reductase

NC_013008
(Escherichia coli TW14359)

5e-37

290) fabG
( YP_006312277.1 )

3-ketoacyl-ACP reductase

NC_017906
(Escherichia coli Xuzhou21)

5e-37

291) Spea_2494
( YP_001502349.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009901
(Shewanella pealeana ATCC 700345)

1e-36

292) Pnap_2307
( YP_982536.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_008781
(Polaromonas naphthalenivorans CJ2)

1e-36

293) Marpi_0090
( YP_005095845.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_016751
(Marinitoga piezophila KA3)

1e-36

294) MAP4_1415
( YP_007971259.1 )

3-oxyacyl-ACP reductase

NC_021200
(Mycobacterium avium MAP4)

1e-36

295) fabG
( YP_886560.1 )

3-ketoacyl-ACP reductase

NC_008596
(Mycobacterium smegmatis MC2 155)

1e-36

296) fabG
( YP_403643.1 )

3-ketoacyl-ACP reductase

NC_007606
(Shigella dysenteriae Sd197)

6e-37

297) fabG2
( YP_006566919.1 )

3-oxoacyl-acyl-carrier protein reductase fabG2

NC_018289
(Mycobacterium smegmatis MC2 155)

6e-37

298) PP4_27020
( YP_008113739.1 )

putative oxidoreductase

NC_021505
(Pseudomonas putida NBRC 14164)

7e-37

299) Sput200_1599
( YP_006009526.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017566
(Shewanella putrefaciens 200)

8e-37

300) Sputcn32_1582
( YP_001183106.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009438
(Shewanella putrefaciens CN-32)

8e-37

301) Sputw3181_2440
( YP_963818.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_008750
(Shewanella sp. W3-18-1)

8e-37

302) Rfer_4047
( YP_525276.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_007908
(Rhodoferax ferrireducens T118)

8e-37

303) Slin_0401
( YP_003385264.1 )

short-chain dehydrogenase/reductase SDR

NC_013730
(Spirosoma linguale DSM 74)

8e-37

304) HPL003_10165
( YP_005075017.1 )

short-chain dehydrogenase/reductase SDR

NC_016641
(Paenibacillus terrae HPL-003)

8e-37

305) fabG
( YP_003796490.1 )

3-oxoacyl-ACP reductase

NC_014355
(Candidatus Nitrospira defluvii )

9e-37

306) Sbal175_2621
( YP_006021178.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017571
(Shewanella baltica BA175)

9e-37

307) Sbal117_1832
( YP_006037073.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017579
(Shewanella baltica OS117)

9e-37

308) Sbal_1719
( YP_001050097.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009052
(Shewanella baltica OS155)

9e-37

309) Shew185_1716
( YP_001365922.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009665
(Shewanella baltica OS185)

9e-37

310) Sbal195_1759
( YP_001554190.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009997
(Shewanella baltica OS195)

9e-37

311) Sbal223_2573
( YP_002358487.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_011663
(Shewanella baltica OS223)

9e-37

312) Sbal678_1798
( YP_005273015.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_016901
(Shewanella baltica OS678)

9e-37

313) fabG
( YP_952800.1 )

3-ketoacyl-ACP reductase

NC_008726
(Mycobacterium vanbaalenii PYR-1)

9e-37

314) MAV_1572
( YP_880806.1 )

short chain dehydrogenase

NC_008595
(Mycobacterium avium 104)

9e-37

315) Shewana3_2558
( YP_870191.1 )

3-oxoacyl-ACP reductase

NC_008577
(Shewanella sp. ANA-3)

1e-36

316) Shewmr4_2396
( YP_734524.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_008321
(Shewanella sp. MR-4)

1e-36

317) Shewmr7_2466
( YP_738508.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_008322
(Shewanella sp. MR-7)

1e-36

318) Hhal_1233
( YP_001002810.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_008789
(Halorhodospira halophila SL1)

1e-36

319) fabG
( YP_005112946.1 )

putative 3-oxoacyl-[acyl-carrier protein] reductase

NC_016776
(Bacteroides fragilis 638R)

2e-36

320) fabG
( YP_213513.1 )

3-oxoacyl-ACP reductase

NC_003228
(Bacteroides fragilis NCTC 9343)

2e-36

321) BF4118
( YP_101394.1 )

3-oxoacyl-ACP reductase

NC_006347
(Bacteroides fragilis YCH46)

2e-36

322) fabG
( NP_718357.1 )

3-oxoacyl-(acyl-carrier-protein) reductase FabG

NC_004347
(Shewanella oneidensis MR-1)

2e-36

323) fabG
( YP_003595855.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014103
(Bacillus megaterium DSM 319)

2e-36

324) Lcho_1203
( YP_001790237.1 )

short-chain dehydrogenase/reductase SDR

NC_010524
(Leptothrix cholodnii SP-6)

3e-36

325) swp_3045
( YP_002312350.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_011566
(Shewanella piezotolerans WP3)

3e-36

326) D521_0217
( YP_007501522.1 )

short-chain dehydrogenase/reductase SDR

NC_020417
(beta proteobacterium CB CB)

3e-36

327) Thena_1434
( YP_004438180.1 )

3-oxoacyl-ACP reductase

NC_015499
(Thermodesulfobium narugense DSM 14796)

3e-36

328) Cyan10605_1563
( YP_007161716.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019776
(Cyanobacterium aponinum PCC 10605)

3e-36

329) Dester_1016
( YP_004281714.1 )

3-oxoacyl-ACP reductase

NC_015185
(Desulfurobacterium thermolithotrophum DSM 11699)

3e-36

330) Intca_0379
( YP_004097655.1 )

2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase

NC_014830
(Intrasporangium calvum DSM 43043)

4e-36

331) Vpar_0699
( YP_003311662.1 )

3-oxoacyl-ACP reductase

NC_013520
(Veillonella parvula DSM 2008)

4e-36

332) CL3_09780
( YP_007809550.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_021024
(butyrate-producing bacterium SM4/1)

4e-36

333) CLS_01800
( YP_007848056.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_021047
(Clostridium saccharolyticum K10)

4e-36

334) fabG
( YP_004844032.1 )

3-oxoacyl-ACP reductase

NC_016001
(Flavobacterium branchiophilum FL-15)

4e-36

335) Sden_2293
( YP_563296.1 )

3-oxoacyl-ACP reductase

NC_007954
(Shewanella denitrificans OS217)

4e-36

336) Sfri_1499
( YP_750188.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_008345
(Shewanella frigidimarina NCIMB 400)

4e-36

337) fabG
( NP_961342.1 )

3-ketoacyl-ACP reductase

NC_002944
(Mycobacterium avium K-10)

4e-36

338) AAur_4134
( YP_949801.1 )

short chain dehydrogenase/reductase family oxidoreductase

NC_008711
(Arthrobacter aurescens TC1)

5e-36

339) fabG
( YP_002998927.1 )

3-oxo-acyl-[acyl-carrier-protein] reductase

NC_012892
(Escherichia coli BL21(DE3))

6e-36

340) fabG
( YP_003053755.1 )

3-oxoacyl-ACP reductase

NC_012971
(Escherichia coli BL21(DE3))

6e-36

341) fabG
( YP_003036715.1 )

3-ketoacyl-ACP reductase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

6e-36

342) fabG
( YP_003044307.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_012967
(Escherichia coli REL606)

6e-36

343) fabG
( YP_861804.1 )

3-oxoacyl-ACP reductase

NC_008571
(Gramella forsetii KT0803)

6e-36

344) fabG
( YP_003712935.1 )

3-oxoacyl-ACP reductase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

6e-36

345) BT_3771
( NP_812682.1 )

3-oxoacyl-ACP reductase

NC_004663
(Bacteroides thetaiotaomicron VPI-5482)

7e-36

346) Murru_3109
( YP_004789552.1 )

3-oxoacyl-ACP reductase

NC_015945
(Muricauda ruestringensis DSM 13258)

7e-36

347) Achl_0410
( YP_002486498.1 )

short-chain dehydrogenase/reductase SDR

NC_011886
(Arthrobacter chlorophenolicus A6)

7e-36

348) Dd1591_1623
( YP_003003955.1 )

3-oxoacyl-ACP reductase

NC_012912
(Dickeya zeae Ech1591)

8e-36

349) fabG
( YP_632932.1 )

3-oxoacyl-ACP reductase

NC_008095
(Myxococcus xanthus DK 1622)

8e-36

350) PM3016_5201
( YP_005315065.1 )

protein FabG

NC_016935
(Paenibacillus mucilaginosus 3016)

8e-36

351) B2K_26895
( YP_006192040.2 )

3-ketoacyl-ACP reductase

NC_017672
(Paenibacillus mucilaginosus K02)

8e-36

352) fabG
( YP_004644253.1 )

3-ketoacyl-ACP reductase

NC_015690
(Paenibacillus mucilaginosus KNP414)

8e-36

353) fabG
( YP_702989.1 )

3-ketoacyl-ACP reductase

NC_008268
(Rhodococcus jostii RHA1)

8e-36

354) FN0494
( NP_603391.1 )

short chain dehydrogenase

NC_003454
(Fusobacterium nucleatum ATCC 25586)

8e-36

355) HMPREF0946_00047
( YP_008476324.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_022196
(Fusobacterium sp. 3_1_36A2)

8e-36

356) M493_17135
( REF_PRJNA208285:M493 )

hypothetical protein

NC_022080
(Geobacillus sp. JF8)

1e-35

357) Shal_1777
( YP_001674001.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_010334
(Shewanella halifaxensis HAW-EB4)

1e-35

358) Emtol_4219
( YP_006875370.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018748
(Emticicia oligotrophica DSM 17448)

1e-35

359) Alvin_1891
( YP_003443847.1 )

3-oxoacyl-ACP reductase

NC_013851
(Allochromatium vinosum DSM 180)

1e-35

360) fabG
( YP_002779917.1 )

3-ketoacyl-ACP reductase

NC_012522
(Rhodococcus opacus B4)

1e-35

361) Riean_1164
( YP_004045830.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014738
(Riemerella anatipestifer ATCC 11845)

1e-35

362) RA0C_1432
( YP_005394870.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017045
(Riemerella anatipestifer ATCC 11845)

1e-35

363) B739_0717
( YP_006723217.1 )

hypothetical protein

NC_018609
(Riemerella anatipestifer RA-CH-1)

1e-35

364) G148_0442
( YP_007355441.1 )

Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

NC_020125
(Riemerella anatipestifer RA-CH-2)

1e-35

365) sdr
( YP_006017524.1 )

Sdr

NC_017569
(Riemerella anatipestifer RA-GD)

1e-35

366) Weevi_0015
( YP_004237322.1 )

3-oxoacyl-ACP reductase

NC_015144
(Weeksella virosa DSM 16922)

1e-35

367) YE105_C2484
( YP_004298683.1 )

3-ketoacyl-ACP reductase

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-35

368) fabG
( YP_001005924.1 )

3-ketoacyl-ACP reductase

NC_008800
(Yersinia enterocolitica 8081)

1e-35

369) Y11_05281
( YP_006004027.1 )

3-oxoacyl-ACP reductase

NC_017564
(Yersinia enterocolitica Y11)

1e-35

370) fabG
( YP_003561106.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014019
(Bacillus megaterium QM B1551)

1e-35

371) fabG
( YP_005496806.1 )

short-chain dehydrogenase

NC_017138
(Bacillus megaterium WSH-002)

1e-35

372) fabG
( YP_328045.1 )

3-ketoacyl-ACP reductase

NC_007429
(Chlamydia trachomatis A/HAR-13)

2e-35

373) fabG-1
( YP_003557292.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014012
(Shewanella violacea DSS12)

2e-35

374) BXY_48340
( YP_007795262.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_021017
(Bacteroides xylanisolvens XB1A)

9e-36

375) Bache_1116
( YP_004160712.1 )

3-oxoacyl-ACP reductase

NC_014933
(Bacteroides helcogenes P 36-108)

9e-36

376) NH44784_002121
( YP_008027322.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

2e-35

377) Sama_1980
( YP_927855.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_008700
(Shewanella amazonensis SB2B)

2e-35

378) fabG1
( YP_004738935.1 )

3-oxoacyl-ACP reductase

NC_015844
(Zobellia galactanivorans DsiJT)

2e-35

379) fabG
( YP_001654566.1 )

3-ketoacyl-ACP reductase

NC_010287
(Chlamydia trachomatis 434/Bu)

2e-35

380) A363_00254
( YP_007731970.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020966
(Chlamydia trachomatis A/363)

2e-35

381) A5291_00253
( YP_007723781.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020939
(Chlamydia trachomatis A/5291)

2e-35

382) A7249_00253
( YP_007728254.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020944
(Chlamydia trachomatis A/7249)

2e-35

383) fabG
( YP_005156067.1 )

3-oxoacyl-ACP reductase

NC_016798
(Chlamydia trachomatis A2497)

2e-35

384) CTO_0259
( YP_005813069.1 )

3-oxoacyl-ACP reductase

NC_017437
(Chlamydia trachomatis A2497)

2e-35

385) fabG
( YP_002888736.1 )

3-ketoacyl-ACP reductase

NC_012687
(Chlamydia trachomatis B/TZ1A828/OT)

2e-35

386) fabG
( YP_005811290.1 )

3-oxoacyl-ACP reductase

NC_017434
(Chlamydia trachomatis D-EC)

2e-35

387) fabG
( YP_005812168.1 )

3-oxoacyl-ACP reductase

NC_017436
(Chlamydia trachomatis D-LC)

2e-35

388) O176_01285
( YP_008467657.1 )

3-ketoacyl-ACP reductase

NC_022119
(Chlamydia trachomatis D/13-96)

2e-35

389) O177_01285
( YP_008442366.1 )

3-ketoacyl-ACP reductase

NC_022109
(Chlamydia trachomatis D/14-96)

2e-35

390) SOTOND1_00247
( YP_007732863.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020967
(Chlamydia trachomatis D/SotonD1)

2e-35

391) SOTOND5_00246
( YP_007727356.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020943
(Chlamydia trachomatis D/SotonD5)

2e-35

392) SOTOND6_00246
( YP_007733756.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020968
(Chlamydia trachomatis D/SotonD6)

2e-35

393) fabG
( NP_219742.1 )

3-ketoacyl-ACP reductase

NC_000117
(Chlamydia trachomatis D/UW-3/CX)

2e-35

394) fabG
( YP_005809441.1 )

3-ketoacyl-ACP reductase

NC_017431
(Chlamydia trachomatis E/11023)

2e-35

395) O175_01285
( YP_008441448.1 )

3-ketoacyl-ACP reductase

NC_022108
(Chlamydia trachomatis E/12-94)

2e-35

396) fabG
( YP_005814031.1 )

3-ketoacyl-ACP reductase

NC_017439
(Chlamydia trachomatis E/150)

2e-35

397) BOUR_00249
( YP_007736437.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020971
(Chlamydia trachomatis E/Bour)

2e-35

398) SOTONE4_00245
( YP_007734646.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020969
(Chlamydia trachomatis E/SotonE4)

2e-35

399) SOTONE8_00251
( YP_007726464.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020942
(Chlamydia trachomatis E/SotonE8)

2e-35

400) fabG
( YP_006361044.1 )

3-oxoacyl-ACP reductase

NC_017952
(Chlamydia trachomatis E/SW3)

2e-35

401) O169_01300
( YP_008465800.1 )

3-ketoacyl-ACP reductase

NC_022117
(Chlamydia trachomatis F/1-93)

2e-35

402) O173_01290
( YP_008440521.1 )

3-ketoacyl-ACP reductase

NC_022107
(Chlamydia trachomatis F/11-96)

2e-35

403) O170_01285
( YP_008439594.1 )

3-ketoacyl-ACP reductase

NC_022106
(Chlamydia trachomatis F/2-93)

2e-35

404) O172_01285
( YP_008466727.1 )

3-ketoacyl-ACP reductase

NC_022118
(Chlamydia trachomatis F/6-94)

2e-35

405) SOTONF3_00246
( YP_007730178.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020964
(Chlamydia trachomatis F/SotonF3)

2e-35

406) fabG
( YP_006360169.1 )

3-oxoacyl-ACP reductase

NC_017951
(Chlamydia trachomatis F/SW4)

2e-35

407) fabG
( YP_006361919.1 )

3-oxoacyl-ACP reductase

NC_017953
(Chlamydia trachomatis F/SW5)

2e-35

408) fabG
( YP_005814956.1 )

3-ketoacyl-ACP reductase

NC_017440
(Chlamydia trachomatis G/11074)

2e-35

409) fabG
( YP_005808510.1 )

3-ketoacyl-ACP reductase

NC_017430
(Chlamydia trachomatis G/11222)

2e-35

410) fabG
( YP_005810363.1 )

3-ketoacyl-ACP reductase

NC_017432
(Chlamydia trachomatis G/9301)

2e-35

411) fabG
( YP_005807590.1 )

3-ketoacyl-ACP reductase

NC_017429
(Chlamydia trachomatis G/9768)

2e-35

412) SOTONG1_00246
( YP_007725567.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020941
(Chlamydia trachomatis G/SotonG1)

2e-35

413) SOTONIA1_00248
( YP_007735542.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020970
(Chlamydia trachomatis Ia/SotonIa1)

2e-35

414) SOTONIA3_00248
( YP_007724675.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020940
(Chlamydia trachomatis Ia/SotonIa3)

2e-35

415) O178_01290
( YP_008468588.1 )

3-ketoacyl-ACP reductase

NC_022120
(Chlamydia trachomatis Ia20-97)

2e-35

416) fabG
( YP_007539932.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_020511
(Chlamydia trachomatis IU824)

2e-35

417) fabG
( YP_007540808.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_020512
(Chlamydia trachomatis IU888)

2e-35

418) O179_01280
( YP_008443279.1 )

3-ketoacyl-ACP reductase

NC_022110
(Chlamydia trachomatis J/27-97)

2e-35

419) O180_01295
( YP_008469516.1 )

3-ketoacyl-ACP reductase

NC_022121
(Chlamydia trachomatis J/31-98)

2e-35

420) fabG
( YP_008348936.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021892
(Chlamydia trachomatis J/6276tet1)

2e-35

421) fabG
( YP_002887854.1 )

3-ketoacyl-ACP reductase

NC_012686
(Chlamydia trachomatis Jali20)

2e-35

422) SOTONK1_00246
( YP_007731070.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020965
(Chlamydia trachomatis K/SotonK1)

2e-35

423) L1115_00243
( YP_007714863.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020929
(Chlamydia trachomatis L1/115)

2e-35

424) L11322_00243
( YP_007737327.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020972
(Chlamydia trachomatis L1/1322/p2)

2e-35

425) L1224_00242
( YP_007738216.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020973
(Chlamydia trachomatis L1/224)

2e-35

426) L1440_00244
( YP_007721990.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020937
(Chlamydia trachomatis L1/440/LN)

2e-35

427) L225667R_00243
( YP_007715752.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020930
(Chlamydia trachomatis L2/25667R)

2e-35

428) fabG
( YP_007852455.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021052
(Chlamydia trachomatis L2/434/Bu(f))

2e-35

429) fabG
( YP_007851514.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021050
(Chlamydia trachomatis L2/434/Bu(i))

2e-35

430) L2B795_00243
( YP_007722881.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020938
(Chlamydia trachomatis L2b/795)

2e-35

431) L2B8200_00242
( YP_007729141.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020945
(Chlamydia trachomatis L2b/8200/07)

2e-35

432) L2BAMS1_00242
( YP_007718423.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020933
(Chlamydia trachomatis L2b/Ams1)

2e-35

433) L2BAMS2_00242
( YP_007719313.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020934
(Chlamydia trachomatis L2b/Ams2)

2e-35

434) L2BAMS3_00242
( YP_007741774.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020977
(Chlamydia trachomatis L2b/Ams3)

2e-35

435) L2BAMS4_00243
( YP_007742665.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020978
(Chlamydia trachomatis L2b/Ams4)

2e-35

436) L2BAMS5_00243
( YP_007721099.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020936
(Chlamydia trachomatis L2b/Ams5)

2e-35

437) L2BCAN1_00244
( YP_007720205.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020935
(Chlamydia trachomatis L2b/Canada1)

2e-35

438) L2BCAN2_00243
( YP_007717532.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020932
(Chlamydia trachomatis L2b/Canada2)

2e-35

439) L2BCV204_00242
( YP_007740884.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020976
(Chlamydia trachomatis L2b/CV204)

2e-35

440) L2BLST_00242
( YP_007739994.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020975
(Chlamydia trachomatis L2b/LST)

2e-35

441) L2BUCH2_00242
( YP_007716641.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020931
(Chlamydia trachomatis L2b/UCH-2)

2e-35

442) fabG
( YP_004717373.1 )

3-oxoacyl-ACP reductase

NC_015744
(Chlamydia trachomatis L2c)

2e-35

443) L3404_00242
( YP_007739106.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020974
(Chlamydia trachomatis L3/404/LN)

2e-35

444) fabG
( YP_008347044.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021890
(Chlamydia trachomatis RC-F(s)/342)

2e-35

445) fabG
( YP_008345171.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021888
(Chlamydia trachomatis RC-F(s)/852)

2e-35

446) fabG
( YP_008351027.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021895
(Chlamydia trachomatis RC-F/69)

2e-35

447) fabG
( YP_008347994.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021891
(Chlamydia trachomatis RC-J(s)/122)

2e-35

448) fabG
( YP_008351950.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021896
(Chlamydia trachomatis RC-J/943)

2e-35

449) fabG
( YP_008346131.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021889
(Chlamydia trachomatis RC-J/953)

2e-35

450) fabG
( YP_008353798.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021898
(Chlamydia trachomatis RC-J/966)

2e-35

451) fabG
( YP_008354722.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021899
(Chlamydia trachomatis RC-J/971)

2e-35

452) fabG
( YP_008352871.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021897
(Chlamydia trachomatis RC-L2(s)/3)

2e-35

453) fabG
( YP_008344251.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021887
(Chlamydia trachomatis RC-L2(s)/46)

2e-35

454) fabG
( YP_008349894.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021893
(Chlamydia trachomatis RC-L2/55)

2e-35

455) fabG
( YP_005815867.1 )

3-oxoacyl-ACP reductase

NC_017441
(Chlamydia trachomatis Sweden2)

2e-35

456) fabG
( YP_001653578.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_010280
(Chlamydia trachomatis UCH-1)

2e-35

457) KTR9_1548
( YP_006668343.1 )

short-chain dehydorgenase/reductase

NC_018581
(Gordonia sp. KTR9)

3e-35

458) Dhaf_3817
( YP_002460269.1 )

3-oxoacyl-ACP reductase

NC_011830
(Desulfitobacterium hafniense DCB-2)

3e-35

459) Mspyr1_37180
( YP_004078158.1 )

hypothetical protein

NC_014814
(Mycobacterium gilvum Spyr1)

3e-35

460) CCU_21980
( YP_007796944.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_021018
(Coprococcus sp. ART55/1)

3e-35

461) fabG
( YP_001519901.1 )

3-ketoacyl-ACP reductase

NC_009925
(Acaryochloris marina MBIC11017)

4e-35

462) AciX9_2850
( YP_004218653.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_015064
(Granulicella tundricola MP5ACTX9)

4e-35

463) fabG
( YP_002773106.1 )

3-oxoacyl-ACP reductase

NC_012491
(Brevibacillus brevis NBRC 100599)

4e-35

464) Cpha266_2492
( YP_912904.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_008639
(Chlorobium phaeobacteroides DSM 266)

4e-35

465) Fleli_3714
( YP_006435819.1 )

dehydrogenase

NC_018018
(Flexibacter litoralis DSM 6794)

4e-35

466) Bacsa_2971
( YP_004259974.1 )

3-oxoacyl-ACP reductase

NC_015164
(Bacteroides salanitronis DSM 18170)

5e-35

467) Gura_1877
( YP_001230640.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009483
(Geobacter uraniireducens Rf4)

5e-35

468) fabG
( YP_001135626.1 )

3-ketoacyl-ACP reductase

NC_009338
(Mycobacterium gilvum PYR-GCK)

5e-35

469) Shew_1603
( YP_001093729.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009092
(Shewanella loihica PV-4)

5e-35

470) Ser39006_3116
( YP_008523498.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_022268
(Serratia sp. ATCC 39006)

6e-35

471) Desca_1086
( YP_004496868.1 )

3-oxoacyl-ACP reductase

NC_015565
(Desulfotomaculum carboxydivorans CO-1-SRB)

6e-35

472) Tmel_1835
( YP_001307055.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009616
(Thermosipho melanesiensis BI429)

6e-35

473) fabG
( YP_006464196.1 )

dehydrogenase

NC_018065
(Solibacillus silvestris StLB046)

6e-35

474) LC40_0223
( YP_005848367.1 )

3-oxoacyl-ACP reductase

NC_017465
(Lactobacillus fermentum CECT 5716)

7e-35

475) LBFF_0333
( YP_007994529.1 )

Short-chain dehydrogenase/reductase SDR

NC_021235
(Lactobacillus fermentum F-6)

7e-35

476) LAF_0313
( YP_001843129.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_010610
(Lactobacillus fermentum IFO 3956)

7e-35

477) Btus_1260
( YP_003589131.1 )

short-chain dehydrogenase/reductase SDR

NC_014098
(Kyrpidia tusciae DSM 2912)

7e-35

478) Pjdr2_5377
( YP_003014073.1 )

short-chain dehydrogenase/reductase SDR

NC_012914
(Paenibacillus sp. JDR-2)

8e-35

479) RTO_10390
( YP_007786234.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_021015
([Ruminococcus] torques L2-14)

1e-34

480) RHA1_ro03841
( YP_703799.1 )

3-oxoacyl-ACP reductase

NC_008268
(Rhodococcus jostii RHA1)

1e-34

481) Caur_3422
( YP_001636996.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_010175
(Chloroflexus aurantiacus J-10-fl)

1e-34

482) Chy400_3683
( YP_002571376.1 )

3-oxoacyl-ACP reductase

NC_012032
(Chloroflexus sp. Y-400-fl)

1e-34

483) Desmer_3745
( YP_006623452.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018515
(Desulfosporosinus meridiei DSM 13257)

1e-34

484) FAES_1907
( YP_007320509.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_020054
(Fibrella aestuarina BUZ 2)

1e-34

485) Theth_1247
( YP_004660415.1 )

3-oxoacyl-ACP reductase

NC_015707
(Thermotoga thermarum DSM 5069)

1e-34

486) fabG
( YP_005368609.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017030
(Corallococcus coralloides DSM 2259)

1e-34

487) GY4MC1_2719
( YP_003990026.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014650
(Geobacillus sp. Y4.1MC1)

1e-34

488) Geoth_2732
( YP_004588701.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

1e-34

489) FB2170_10901
( YP_003863052.1 )

putative 3-oxoacyl-[acyl-carrier protein] reductase

NC_014472
(Maribacter sp. HTCC2170)

1e-34

490) Aazo_3207
( YP_003722043.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014248
(Nostoc azollae 0708)

1e-34

491) EC1_01270
( YP_007797529.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_021019
(Eubacterium cylindroides T2-87)

8e-35

492) Ornrh_2321
( YP_006428244.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018016
(Ornithobacterium rhinotracheale DSM 15997)

8e-35

493) fabG
( YP_907443.1 )

3-ketoacyl-ACP reductase

NC_008611
(Mycobacterium ulcerans Agy99)

8e-35

494) Geob_2614
( YP_002538065.1 )

3-oxoacyl-ACP reductase

NC_011979
(Geobacter daltonii FRC-32)

8e-35

495) BVU_0384
( YP_001297725.1 )

3-oxoacyl-ACP reductase

NC_009614
(Bacteroides vulgatus ATCC 8482)

9e-35

496) Glov_1936
( YP_001952172.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_010814
(Geobacter lovleyi SZ)

9e-35

497) Ferpe_0221
( YP_005470491.1 )

dehydrogenase

NC_017095
(Fervidobacterium pennivorans DSM 9078)

2e-34

498) Cyast_0838
( YP_007164459.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019778
(Cyanobacterium stanieri PCC 7202)

2e-34

499) RBRH_02617
( YP_004028452.1 )

3-oxoacyl-ACP reductase

NC_014722
(Burkholderia rhizoxinica HKI 454)

3e-34

500) nfa32290
( YP_119440.1 )

short chain dehydrogenase

NC_006361
(Nocardia farcinica IFM 10152)

3e-34

501) fabG4
( YP_003977935.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_014640
(Achromobacter xylosoxidans A8)

3e-34

502) Celly_2962
( YP_004263650.1 )

3-oxoacyl-ACP reductase

NC_015167
(Cellulophaga lytica DSM 7489)

3e-34

503) CtCNB1_1271
( YP_003277313.1 )

short-chain dehydrogenase/reductase SDR

NC_013446
(Comamonas testosteroni CNB-1)

3e-34

504) fabG
( NP_993584.1 )

3-ketoacyl-ACP reductase

NC_005810
(Yersinia pestis 91001)

3e-34

505) fabG
( YP_005523215.1 )

3-ketoacyl-ACP reductase

NC_017168
(Yersinia pestis A1122)

3e-34

506) fabG
( YP_651837.1 )

3-ketoacyl-ACP reductase

NC_008150
(Yersinia pestis Antiqua)

3e-34

507) fabG
( YP_002346610.1 )

3-ketoacyl-ACP reductase

NC_003143
(Yersinia pestis CO92)

3e-34

508) fabG
( YP_005509200.1 )

3-ketoacyl-ACP reductase

NC_017160
(Yersinia pestis D182038)

3e-34

509) fabG
( YP_005623597.1 )

3-oxoacyl-ACP reductase

NC_017265
(Yersinia pestis Harbin 35)

3e-34

510) fabG
( NP_669075.1 )

3-ketoacyl-ACP reductase

NC_004088
(Yersinia pestis KIM)

3e-34

511) fabG
( YP_647959.1 )

3-ketoacyl-ACP reductase

NC_008149
(Yersinia pestis Nepal516)

3e-34

512) fabG
( YP_001163206.1 )

3-ketoacyl-ACP reductase

NC_009381
(Yersinia pestis Pestoides F)

3e-34

513) fabG
( YP_003568261.1 )

3-ketoacyl-ACP reductase

NC_014029
(Yersinia pestis Z176003)

3e-34

514) fabG
( YP_070984.1 )

3-ketoacyl-ACP reductase

NC_006155
(Yersinia pseudotuberculosis IP 32953)

3e-34

515) fabG
( YP_001872976.1 )

3-ketoacyl-ACP reductase

NC_010634
(Yersinia pseudotuberculosis PB1/+)

3e-34

516) fabG
( YP_001720432.1 )

3-ketoacyl-ACP reductase

NC_010465
(Yersinia pseudotuberculosis YPIII)

3e-34

517) fabG
( YP_006337660.1 )

3-oxoacyl-ACP reductase

NC_017924
(Blattabacterium sp. BGIGA)

3e-34

518) PPUBIRD1_1881
( YP_005929747.1 )

short-chain dehydrogenase

NC_017530
(Pseudomonas putida BIRD-1)

3e-34

519) rabNRDR
( YP_006531952.1 )

short chain dehydrogenase

NC_018220
(Pseudomonas putida DOT-T1E)

3e-34

520) PP_3926
( NP_746056.1 )

short chain dehydrogenase

NC_002947
(Pseudomonas putida KT2440)

3e-34

521) YSA_09002
( YP_006388750.1 )

short chain dehydrogenase

NC_017986
(Pseudomonas putida ND6)

3e-34

522) Celal_4162
( YP_004166902.1 )

3-oxoacyl-ACP reductase

NC_014934
(Cellulophaga algicola DSM 14237)

4e-34

523) LILAB_31800
( YP_004669319.1 )

3-oxoacyl-ACP reductase

NC_015711
(Myxococcus fulvus HW-1)

4e-34

524) Caur_3262
( YP_001636839.1 )

short-chain dehydrogenase/reductase SDR

NC_010175
(Chloroflexus aurantiacus J-10-fl)

5e-34

525) Chy400_3520
( YP_002571217.1 )

short-chain dehydrogenase/reductase SDR

NC_012032
(Chloroflexus sp. Y-400-fl)

5e-34

526) Desde_3278
( YP_006431359.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018017
(Desulfitobacterium dehalogenans ATCC 51507)

5e-34

527) Btus_1586
( YP_003589440.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014098
(Kyrpidia tusciae DSM 2912)

5e-34

528) fabG
( YP_001607829.1 )

3-ketoacyl-ACP reductase

NC_010159
(Yersinia pestis Angola)

5e-34

529) fabG2
( YP_001620498.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_010163
(Acholeplasma laidlawii PG-8A)

5e-34

530) Glo7428_0237
( YP_007126006.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019745
(Gloeocapsa sp. PCC 7428)

5e-34

531) fabG
( YP_001353048.1 )

3-oxoacyl-ACP reductase

NC_009659
(Janthinobacterium sp. Marseille)

5e-34

532) SA2981_2409
( YP_005743158.1 )

Glutamate dehydrogenase

NC_017340
(Staphylococcus aureus 04-02981)

5e-34

533) ECTR2_2329
( YP_005751008.1 )

short chain dehydrogenase family protein

NC_017343
(Staphylococcus aureus ECT-R 2)

5e-34

534) SAAV_2538
( YP_003283374.1 )

putative short-chain dehydrogenase

NC_013450
(Staphylococcus aureus ED98)

5e-34

535) SaurJH1_2549
( YP_001317660.1 )

short chain dehydrogenase

NC_009632
(Staphylococcus aureus JH1)

5e-34

536) SaurJH9_2499
( YP_001247852.1 )

short chain dehydrogenase

NC_009487
(Staphylococcus aureus JH9)

5e-34

537) SAHV_2456
( YP_001443046.1 )

short chain dehydrogenase

NC_009782
(Staphylococcus aureus Mu3)

5e-34

538) SAV2472
( NP_372996.1 )

short chain dehydrogenase

NC_002758
(Staphylococcus aureus Mu50)

5e-34

539) SA2260
( NP_375584.1 )

short chain dehydrogenase

NC_002745
(Staphylococcus aureus N315)

5e-34

540) SAI6T6_1018360
( YP_007584380.1 )

Similar to glucose 1-dehydrogenase

NC_020536
(Staphylococcus aureus ST228)

5e-34

541) SAI5S5_1018360
( YP_007622095.1 )

Similar to glucose 1-dehydrogenase

NC_020566
(Staphylococcus aureus ST228)

5e-34

542) SAI8T7_1018400
( YP_007624084.1 )

Similar to glucose 1-dehydrogenase

NC_020568
(Staphylococcus aureus ST228)

5e-34

543) SAI1T1_2018420
( YP_007578394.1 )

Similar to glucose 1-dehydrogenase

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

5e-34

544) SAI2T2_1018430
( YP_007620110.1 )

Similar to glucose 1-dehydrogenase

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

5e-34

545) SAI3T3_1018420
( YP_007580402.1 )

Similar to glucose 1-dehydrogenase

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

5e-34

546) SAI4T8_1018430
( YP_007582367.1 )

Similar to glucose 1-dehydrogenase

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

5e-34

547) SAI7S6_1018420
( YP_007586349.1 )

Similar to glucose 1-dehydrogenase

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

5e-34

548) AARI_31570
( YP_003918327.1 )

short-chain dehydrogenases/reductases family protein

NC_014550
(Arthrobacter arilaitensis Re117)

6e-34

549) Cal7507_1099
( YP_007064409.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019682
(Calothrix sp. PCC 7507)

6e-34

550) fabG2
( NP_903246.1 )

3-oxoacyl-ACP reductase

NC_005085
(Chromobacterium violaceum ATCC 12472)

6e-34

551) fabG
( YP_001658404.1 )

3-ketoacyl-ACP reductase

NC_010296
(Microcystis aeruginosa NIES-843)

1e-33

552) fabG6
( YP_007031030.1 )

3-ketoacyl-ACP reductase

NC_019670
(Pseudomonas sp. UW4)

1e-33

553) Fluta_3559
( YP_004346366.1 )

3-oxoacyl-ACP reductase

NC_015321
(Fluviicola taffensis DSM 16823)

1e-33

554) Nos7107_0953
( YP_007048764.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019676
(Nostoc sp. PCC 7107)

1e-33

555) Tlie_1315
( YP_004933142.1 )

short-chain dehydrogenase/reductase SDR

NC_016148
(Thermovirga lienii DSM 17291)

1e-33

556) fabG
( YP_004531677.1 )

3-oxoacyl-ACP reductase

NC_015578
(Treponema primitia ZAS-2)

1e-33

557) Rxyl_2740
( YP_645467.1 )

short-chain dehydrogenase/reductase SDR

NC_008148
(Rubrobacter xylanophilus DSM 9941)

5e-34

558) fabG
( YP_007264094.1 )

Putative 3-oxoacyl-[acyl-carrier protein] reductase FabG2 (3-ketoacyl-acyl carrier protein reductase)

NC_019951
(Mycobacterium canettii CIPT 140070010)

6e-34

559) fabG
( YP_001400555.1 )

3-ketoacyl-ACP reductase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

6e-34

560) fabG
( YP_007287261.1 )

Putative 3-oxoacyl-[acyl-carrier protein] reductase FabG2 (3-ketoacyl-acyl carrier protein reductase)

NC_019965
(Mycobacterium canettii CIPT 140070008)

8e-34

561) Cagg_0630
( YP_002462003.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_011831
(Chloroflexus aggregans DSM 9485)

8e-34

562) Fnod_0313
( YP_001409835.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009718
(Fervidobacterium nodosum Rt17-B1)

8e-34

563) fabG
( NP_485934.1 )

3-ketoacyl-ACP reductase

NC_003272
(Nostoc sp. PCC 7120)

8e-34

564) fabG2
( YP_004723061.1 )

3-oxoacyl-ACP reductase

NC_015758
(Mycobacterium africanum GM041182)

9e-34

565) fabG
( NP_855039.1 )

3-ketoacyl-ACP reductase

NC_002945
(Mycobacterium bovis AF2122/97)

9e-34

566) fabG
( YP_977504.1 )

3-ketoacyl-ACP reductase

NC_008769
(Mycobacterium bovis BCG Pasteur 1173P2)

9e-34

567) K60_014490
( YP_007430507.1 )

3-ketoacyl-ACP reductase

NC_020245
(Mycobacterium bovis Korea 1168P)

9e-34

568) fabG
( YP_005170848.1 )

putative 3-oxoacyl-[acyl-carrier protein] reductase

NC_016804
(Mycobacterium bovis Mexico)

9e-34

569) fabG
( YP_002644442.1 )

3-ketoacyl-ACP reductase

NC_012207
(Mycobacterium bovis Tokyo 172)

9e-34

570) fabG2
( YP_004744818.1 )

putative 3-oxoacyl-[acyl-carrier protein] reductase FABG2

NC_015848
(Mycobacterium canettii CIPT 140010059)

9e-34

571) fabG
( YP_007260081.1 )

Putative 3-oxoacyl-[acyl-carrier protein] reductase FabG2 (3-ketoacyl-acyl carrier protein reductase)

NC_019950
(Mycobacterium canettii CIPT 140060008)

9e-34

572) MT7199_1382
( YP_007351120.1 )

putative 3-OXOACYL-[ACYL-CARRIER protein] REDUCTASE FABG2 (3-KETOACYL-ACYL CARRIER protein REDUCTASE)

NC_020089
(Mycobacterium tuberculosis 7199-99)

9e-34

573) fabG
( YP_007854309.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021054
(Mycobacterium tuberculosis Beijing/NITR203)

9e-34

574) fabG
( YP_007961262.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021193
(Mycobacterium tuberculosis CAS/NITR204)

9e-34

575) CCDC5079_1250
( YP_005912673.1 )

3-ketoacyl-ACP reductase

NC_017523
(Mycobacterium tuberculosis CCDC5079)

9e-34

576) fabG2
( YP_008006271.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_021251
(Mycobacterium tuberculosis CCDC5079)

9e-34

577) CCDC5180_1241
( YP_005909073.1 )

3-ketoacyl-ACP reductase

NC_017522
(Mycobacterium tuberculosis CCDC5180)

9e-34

578) fabG
( NP_335842.1 )

3-ketoacyl-ACP reductase

NC_002755
(Mycobacterium tuberculosis CDC1551)

9e-34

579) fabG
( YP_005916433.1 )

3-ketoacyl-ACP reductase

NC_017524
(Mycobacterium tuberculosis CTRI-2)

9e-34

580) M943_07080
( YP_008225458.1 )

3-oxoacyl-ACP synthase

NC_021740
(Mycobacterium tuberculosis EAI5)

9e-34

581) fabG
( YP_007965242.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021194
(Mycobacterium tuberculosis EAI5/NITR206)

9e-34

582) fabG
( YP_007609986.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020559
(Mycobacterium tuberculosis Erdman (ATCC35801))

9e-34

583) fabG
( YP_001287325.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_009565
(Mycobacterium tuberculosis F11)

9e-34

584) fabG
( YP_001282662.1 )

3-ketoacyl-ACP reductase

NC_009525
(Mycobacterium tuberculosis H37Ra)

9e-34

585) fabG2
( NP_215866.1 )

Probable 3-oxoacyl-[acyl-carrier protein] reductase FabG2 (3-ketoacyl-acyl carrier protein reductase)

NC_000962
(Mycobacterium tuberculosis H37Rv)

9e-34

586) RVBD_1350
( YP_006514728.1 )

3-oxoacyl-ACP reductase

NC_018143
(Mycobacterium tuberculosis H37Rv)

9e-34

587) TBHG_01337
( YP_002161377.1 )

3-oxoacyl-[acyl-carrier protein] reductase FabG2

NC_022350
(Mycobacterium tuberculosis Haarlem)

9e-34

588) fabG
( YP_007957464.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021192
(Mycobacterium tuberculosis Haarlem/NITR202)

9e-34

589) fabG
( YP_003032603.1 )

3-ketoacyl-ACP reductase

NC_012943
(Mycobacterium tuberculosis KZN 1435)

9e-34

590) TBSG_02642
( YP_005101110.1 )

3-oxoacyl-[acyl-carrier protein] reductase fabG2

NC_016768
(Mycobacterium tuberculosis KZN 4207)

9e-34

591) TBXG_002608
( YP_006474098.1 )

3-oxoacyl-[acyl-carrier protein] reductase fabG2

NC_018078
(Mycobacterium tuberculosis KZN 605)

9e-34

592) fabG2
( YP_005307670.1 )

hypothetical protein

NC_016934
(Mycobacterium tuberculosis UT205)

9e-34

593) CTN_0912
( YP_002534454.1 )

3-oxoacyl-ACP reductase

NC_011978
(Thermotoga neapolitana DSM 4359)

1e-33

594) fabG-2
( YP_002139904.1 )

3-oxoacyl-ACP reductase

NC_011146
(Geobacter bemidjiensis Bem)

1e-33

595) Ftrac_3635
( YP_004055713.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014759
(Marivirga tractuosa DSM 4126)

1e-33

596) Ssol_2412
( YP_005644168.1 )

short-chain dehydrogenase/reductase SDR

NC_017274
(Sulfolobus solfataricus 98/2)

1e-33

597) Pnec_0235
( YP_001797146.1 )

short-chain dehydrogenase/reductase SDR

NC_010531
(Polynucleobacter necessarius STIR1)

2e-33

598) fabG
( YP_003425032.1 )

3-oxoacyl-ACP reductase

NC_013791
(Bacillus pseudofirmus OF4)

2e-33

599) fabG
( YP_004524664.1 )

3-oxoacyl-ACP reductase

NC_015576
(Mycobacterium sp. JDM601)

2e-33

600) C380_11995
( YP_006854738.1 )

short-chain dehydrogenase/reductase sdr

NC_018708
(Acidovorax sp. KKS102)

2e-33

601) fabG
( YP_003599388.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014103
(Bacillus megaterium DSM 319)

2e-33

602) fabG
( YP_003564667.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014019
(Bacillus megaterium QM B1551)

2e-33

603) BMWSH_1005
( YP_005493198.1 )

3-oxoacyl-ACP reductase

NC_017138
(Bacillus megaterium WSH-002)

2e-33

604) fabG
( NP_968867.1 )

3-oxoacyl-ACP reductase

NC_005363
(Bdellovibrio bacteriovorus HD100)

2e-33

605) fabG
( YP_007022935.1 )

3-oxoacyl-(Acyl-carrier-protein) reductase

NC_019567
(Bdellovibrio bacteriovorus Tiberius)

2e-33

606) ELI_1614
( YP_003959563.1 )

hypothetical protein

NC_014624
(Eubacterium limosum KIST612)

2e-33

607) LVIS_2241
( YP_796322.1 )

3-oxoacyl-ACP reductase

NC_008497
(Lactobacillus brevis ATCC 367)

2e-33

608) Tresu_0406
( YP_004364656.1 )

3-oxoacyl-ACP reductase

NC_015385
(Treponema succinifaciens DSM 2489)

2e-33

609) Cha6605_4572
( YP_007099018.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019697
(Chamaesiphon minutus PCC 6605)

2e-33

610) PMN2A_1785
( YP_292976.1 )

3-oxoacyl-ACP reductase

NC_007335
(Prochlorococcus marinus NATL2A)

2e-33

611) fabG
( YP_002897657.1 )

3-ketoacyl-ACP reductase

NC_012695
(Burkholderia pseudomallei MSHR346)

3e-33

612) Lcho_3979
( YP_001792998.1 )

short-chain dehydrogenase/reductase SDR

NC_010524
(Leptothrix cholodnii SP-6)

3e-33

613) Pnuc_0400
( YP_001155184.1 )

3-oxoacyl-ACP reductase

NC_009379
(Polynucleobacter necessarius QLW-P1DMWA-1)

3e-33

614) fabG
( YP_001199169.1 )

3-ketoacyl-ACP reductase

NC_009442
(Streptococcus suis 05ZYH33)

3e-33

615) fabG
( YP_001201365.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_009443
(Streptococcus suis 98HAH33)

3e-33

616) fabG
( YP_006085285.1 )

3-ketoacyl-ACP reductase

NC_017622
(Streptococcus suis A7)

3e-33

617) fabG
( YP_003029372.1 )

3-ketoacyl-ACP reductase

NC_012926
(Streptococcus suis BM407)

3e-33

618) fabG
( YP_006081225.1 )

3-oxoacyl-ACP reductase

NC_017620
(Streptococcus suis D9)

3e-33

619) SSGZ1_1623
( YP_006075021.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017617
(Streptococcus suis GZ1)

3e-33

620) fabG
( YP_006077091.1 )

3-ketoacyl-ACP reductase

NC_017618
(Streptococcus suis JS14)

3e-33

621) fabG
( YP_003027439.1 )

3-ketoacyl-ACP reductase

NC_012925
(Streptococcus suis P1/7)

3e-33

622) fabG
( YP_006650447.1 )

3-ketoacyl-ACP reductase

NC_018526
(Streptococcus suis S735)

3e-33

623) NJAUSS_1662
( YP_007571604.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020526
(Streptococcus suis SC070731)

3e-33

624) fabG
( YP_003025613.1 )

3-ketoacyl-ACP reductase

NC_012924
(Streptococcus suis SC84)

3e-33

625) fabG
( YP_006079165.1 )

3-ketoacyl-ACP reductase

NC_017619
(Streptococcus suis SS12)

3e-33

626) fabG
( YP_004402239.1 )

3-oxoacyl-ACP reductase

NC_015433
(Streptococcus suis ST3)

3e-33

627) fabG
( YP_007975943.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_021213
(Streptococcus suis TL13)

3e-33

628) fabG
( YP_001070019.1 )

3-ketoacyl-ACP reductase

NC_009077
(Mycobacterium sp. JLS)

4e-33

629) fabG
( YP_937795.1 )

3-ketoacyl-ACP reductase

NC_008705
(Mycobacterium sp. KMS)

4e-33

630) fabG
( YP_638922.1 )

3-ketoacyl-ACP reductase

NC_008146
(Mycobacterium sp. MCS)

4e-33

631) fabG
( YP_003785036.1 )

3-ketoacyl-ACP reductase

NC_014330
(Brachyspira pilosicoli 95/1000)

4e-33

632) B2904_orf838
( YP_006706931.1 )

3-ketoacyl-ACP reductase

NC_018607
(Brachyspira pilosicoli B2904)

4e-33

633) BPP43_00340
( YP_007233687.1 )

3-ketoacyl-ACP reductase

NC_019908
(Brachyspira pilosicoli P43/6/78)

4e-33

634) WESB_1835
( YP_006704388.1 )

3-ketoacyl-acyl-carrier protein reductase

NC_018604
(Brachyspira pilosicoli WesB)

4e-33

635) fabG
( YP_003775341.1 )

3-oxoacyl-ACP reductase oxidoreductase

NC_014323
(Herbaspirillum seropedicae SmR1)

4e-33

636) fabG
( YP_001865860.1 )

3-ketoacyl-ACP reductase

NC_010628
(Nostoc punctiforme PCC 73102)

4e-33

637) fabG
( NP_874846.1 )

short-chain dehydrogenase/reductase family protein

NC_005042
(Prochlorococcus marinus CCMP1375)

4e-33

638) DEFDS_0152
( YP_003495420.1 )

3-oxoacyl-ACP reductase

NC_013939
(Deferribacter desulfuricans SSM1)

4e-33

639) Fbal_1397
( YP_003912675.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014541
(Ferrimonas balearica DSM 9799)

4e-33

640) Btus_1443
( YP_003589300.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014098
(Kyrpidia tusciae DSM 2912)

4e-33

641) fabG
( YP_258916.1 )

3-ketoacyl-ACP reductase

NC_004129
(Pseudomonas protegens Pf-5)

5e-33

642) fabG
( YP_007268041.1 )

Putative 3-oxoacyl-[acyl-carrier protein] reductase FabG2 (3-ketoacyl-acyl carrier protein reductase)

NC_019952
(Mycobacterium canettii CIPT 140070017)

5e-33

643) Psefu_2729
( YP_004474788.1 )

3-oxoacyl-ACP reductase

NC_015556
(Pseudomonas fulva 12-X)

5e-33

644) PSEBR_a4051
( YP_004355455.1 )

3-oxoacyl-ACP reductase

NC_015379
(Pseudomonas brassicacearum NFM421)

5e-33

645) Tbd_1549
( YP_315307.1 )

3-oxoacyl-ACP reductase

NC_007404
(Thiobacillus denitrificans ATCC 25259)

5e-33

646) fabG
( YP_003256721.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_013416
(Aggregatibacter actinomycetemcomitans D11S-1)

5e-33

647) BpOF4_13545
( YP_003427652.1 )

short chain dehydrogenase

NC_013791
(Bacillus pseudofirmus OF4)

6e-33

648) fabG6
( YP_007999119.1 )

3-oxoacyl-[acyl-carrier-protein] reductase FabG

NC_021237
(Pseudomonas fluorescens CHA0)

6e-33

649) APP7_2079
( YP_001969873.1 )

3-oxoacyl-ACP reductase

NC_010939
(Actinobacillus pleuropneumoniae AP76)

6e-33

650) fabG
( YP_001653029.1 )

3-ketoacyl-ACP reductase

NC_010278
(Actinobacillus pleuropneumoniae JL03)

6e-33

651) fabG
( YP_001054671.1 )

3-ketoacyl-ACP reductase

NC_009053
(Actinobacillus pleuropneumoniae L20)

6e-33

652) WQG_3910
( YP_007547462.1 )

3-ketoacyl-(Acyl-carrier-protein) reductase

NC_020515
(Bibersteinia trehalosi USDA-ARS-USMARC-192)

6e-33

653) Arth_0841
( YP_830339.1 )

short-chain dehydrogenase/reductase SDR

NC_008541
(Arthrobacter sp. FB24)

7e-33

654) fabG
( YP_005209542.1 )

protein FabG

NC_016830
(Pseudomonas fluorescens F113)

7e-33

655) NATL1_05081
( YP_001014335.1 )

3-oxoacyl-ACP reductase

NC_008819
(Prochlorococcus marinus NATL1A)

7e-33

656) Trebr_0696
( YP_004439269.1 )

3-oxoacyl-ACP reductase

NC_015500
(Treponema brennaborense DSM 12168)

8e-33

657) Daro_2017
( YP_285232.1 )

3-oxoacyl-ACP reductase

NC_007298
(Dechloromonas aromatica RCB)

8e-33

658) fabG
( YP_006359551.1 )

3-ketoacyl-ACP reductase

NC_017950
(Streptococcus suis ST1)

8e-33

659) fabG-2
( YP_006720569.1 )

3-oxoacyl-ACP reductase

NC_007517
(Geobacter metallireducens GS-15)

1e-32

660) fabG_1
( YP_006325446.1 )

3-oxoacyl-ACP reductase

NC_017911
(Pseudomonas fluorescens A506)

1e-32

661) fabG
( YP_349885.1 )

3-ketoacyl-ACP reductase

NC_007492
(Pseudomonas fluorescens Pf0-1)

1e-32

662) fabG
( YP_002874226.1 )

3-ketoacyl-ACP reductase

NC_012660
(Pseudomonas fluorescens SBW25)

1e-32

663) Pnec_0407
( YP_001797299.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_010531
(Polynucleobacter necessarius STIR1)

1e-32

664) Tint_2531
( YP_003644202.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014153
(Thiomonas intermedia K12)

1e-32

665) THI_2930
( YP_003625333.1 )

putative 3-oxoacyl-[acyl-carrier-protein] reductase

NC_014145
(Thiomonas sp. 3As)

1e-32

666) Rmar_2450
( YP_003291716.1 )

3-oxoacyl-ACP reductase

NC_013501
(Rhodothermus marinus DSM 4252)

2e-32

667) RHA1_ro05413
( YP_705351.1 )

3-oxoacyl-ACP reductase

NC_008268
(Rhodococcus jostii RHA1)

2e-32

668) ROP_37110
( YP_002780903.1 )

oxidoreductase

NC_012522
(Rhodococcus opacus B4)

9e-33

669) RGE_42180
( YP_005439053.1 )

short-chain dehydrogenase/reductase SDR

NC_017075
(Rubrivivax gelatinosus IL144)

2e-32

670) Franean1_3710
( YP_001508013.1 )

short-chain dehydrogenase/reductase SDR

NC_009921
(Frankia sp. EAN1.pec)

2e-32

671) fabG
( YP_006816394.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_018690
(Actinobacillus suis H91-0380)

2e-32

672) D7S_01186
( YP_006286794.1 )

3-ketoacyl-ACP reductase

NC_017846
(Aggregatibacter actinomycetemcomitans D7S-1)

2e-32

673) fabG
( YP_007398480.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020209
(Pseudomonas poae RE*1-1-14)

2e-32

674) RB2501_15174
( YP_003196023.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_013222
(Robiginitalea biformata HTCC2501)

2e-32

675) GM18_3077
( YP_004199796.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014973
(Geobacter sp. M18)

3e-32

676) fabG
( YP_005898520.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017515
(Neisseria meningitidis M04-240196)

3e-32

677) fabG
( YP_002864610.1 )

3-ketoacyl-ACP reductase

NC_012658
(Clostridium botulinum 657)

3e-32

678) fabG
( YP_003538543.1 )

3-oxoacyl-ACP reductase

NC_013971
(Erwinia amylovora ATCC 49946)

3e-32

679) fabG
( YP_003530832.1 )

3-oxoacyl-ACP reductase

NC_013961
(Erwinia amylovora CFBP1430)

3e-32

680) Gbro_4223
( YP_003275268.1 )

short-chain dehydrogenase/reductase SDR

NC_013441
(Gordonia bronchialis DSM 43247)

3e-32

681) Psest_1688
( YP_007239868.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019936
(Pseudomonas stutzeri RCH2)

3e-32

682) Pcryo_0516
( YP_579783.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_007969
(Psychrobacter cryohalolentis K5)

3e-32

683) fabG
( YP_008162460.1 )

3-ketoacyl-ACP reductase

NC_021661
(Psychrobacter sp. G)

3e-32

684) NMBB_2191
( YP_005883467.1 )

putative 3-oxoacyl-[acyl-carrier protein] reductase

NC_017505
(Neisseria meningitidis alpha710)

4e-32

685) fabG
( YP_004049427.1 )

3-oxoacyl-ACP reductase

NC_014752
(Neisseria lactamica 020-06)

4e-32

686) fabG
( YP_005891229.1 )

3-oxoacyl-ACP reductase

NC_017512
(Neisseria meningitidis WUE 2594)

4e-32

687) fabG
( YP_002342017.1 )

3-ketoacyl-ACP reductase

NC_003116
(Neisseria meningitidis Z2491)

4e-32

688) Rhom172_2450
( YP_004826180.1 )

3-oxoacyl-ACP reductase

NC_015966
(Rhodothermus marinus SG0.5JP17-172)

4e-32

689) GM21_1156
( YP_003020975.1 )

3-oxoacyl-ACP reductase

NC_012918
(Geobacter sp. M21)

4e-32

690) Shal_2747
( YP_001674959.1 )

short-chain dehydrogenase/reductase SDR

NC_010334
(Shewanella halifaxensis HAW-EB4)

4e-32

691) fabG
( YP_692789.1 )

3-oxoacyl-ACP reductase

NC_008260
(Alcanivorax borkumensis SK2)

4e-32

692) Btus_0471
( YP_003588383.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014098
(Kyrpidia tusciae DSM 2912)

4e-32

693) fabG
( YP_263818.1 )

3-oxoacyl-ACP reductase

NC_007204
(Psychrobacter arcticus 273-4)

4e-32

694) Turpa_2755
( YP_006440900.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018020
(Turneriella parva DSM 21527)

4e-32

695) fabG
( YP_001598460.1 )

3-ketoacyl-ACP reductase

NC_010120
(Neisseria meningitidis 053442)

5e-32

696) fabG
( YP_003082484.1 )

3-ketoacyl-ACP reductase

NC_013016
(Neisseria meningitidis alpha14)

5e-32

697) fabG
( YP_005803063.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017390
(Erwinia pyrifoliae DSM 12163)

5e-32

698) fabG
( YP_002649152.1 )

3-ketoacyl-ACP reductase

NC_012214
(Erwinia pyrifoliae Ep1/96)

5e-32

699) fabG
( NP_519173.1 )

3-ketoacyl-ACP reductase

NC_003295
(Ralstonia solanacearum GMI1000)

5e-32

700) fabG
( YP_003007930.1 )

3-ketoacyl-ACP reductase

NC_012913
(Aggregatibacter aphrophilus NJ8700)

5e-32

701) fabG
( YP_005879304.1 )

3-oxoacyl-ACP reductase

NC_017501
(Neisseria meningitidis 8013)

6e-32

702) fabG
( YP_974416.1 )

3-ketoacyl-ACP reductase

NC_008767
(Neisseria meningitidis FAM18)

6e-32

703) fabG
( YP_005893210.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017513
(Neisseria meningitidis G2136)

6e-32

704) fabG
( YP_005900483.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017516
(Neisseria meningitidis H44/76)

6e-32

705) fabG
( YP_005902444.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017517
(Neisseria meningitidis M01-240355)

6e-32

706) fabG
( NP_274915.1 )

3-ketoacyl-ACP reductase

NC_003112
(Neisseria meningitidis MC58)

6e-32

707) KTR9_1440
( YP_006668235.1 )

short-chain dehydorgenase/reductase

NC_018581
(Gordonia sp. KTR9)

6e-32

708) TRQ2_1110
( YP_001739139.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_010483
(Thermotoga sp. RQ2)

6e-32

709) NAL212_0670
( YP_004293770.1 )

3-oxoacyl-ACP reductase

NC_015222
(Nitrosomonas sp. AL212)

6e-32

710) Oweho_0697
( YP_004988356.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_016599
(Owenweeksia hongkongensis DSM 17368)

6e-32

711) Sros_7515
( YP_003342940.1 )

short-chain dehydrogenase/reductase SDR

NC_013595
(Streptosporangium roseum DSM 43021)

6e-32

712) fabG
( YP_005895108.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017514
(Neisseria meningitidis M01-240149)

7e-32

713) fabG
( YP_005903047.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017518
(Neisseria meningitidis NZ-05/33)

7e-32

714) Desor_4702
( YP_004972621.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_016584
(Desulfosporosinus orientis DSM 765)

7e-32

715) fabG
( YP_005819143.1 )

3-ketoacyl-ACP reductase

NC_017445
(Erwinia sp. Ejp617)

7e-32

716) TM1724
( NP_229523.1 )

3-oxoacyl-ACP reductase

NC_000853
(Thermotoga maritima MSB8)

7e-32

717) Tmari_1732
( YP_007978081.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_021214
(Thermotoga maritima MSB8)

7e-32

718) fabG
( YP_001783236.1 )

3-ketoacyl-ACP reductase

NC_010516
(Clostridium botulinum Okra)

7e-32

719) Slit_1530
( YP_003524153.1 )

3-oxoacyl-ACP reductase

NC_013959
(Sideroxydans lithotrophicus ES-1)

7e-32

720) Halhy_1942
( YP_004446700.1 )

3-oxoacyl-ACP reductase

NC_015510
(Haliscomenobacter hydrossis DSM 1100)

8e-32

721) AZL_b06200
( YP_003451827.1 )

short-chain dehydrogenase/reductase SDR

NC_013856
(Azospirillum sp. B510)

1e-31

722) fabG2
( YP_003296145.1 )

3-ketoacyl-ACP reductase

NC_013508
(Edwardsiella tarda EIB202)

1e-31

723) ETAF_1898
( YP_005699496.1 )

3-oxoacyl-ACP reductase

NC_017309
(Edwardsiella tarda FL6-60)

1e-31

724) MXAN_6399
( YP_634523.1 )

3-oxoacyl-ACP reductase

NC_008095
(Myxococcus xanthus DK 1622)

1e-31

725) F504_1020
( YP_007632036.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_020799
(Ralstonia solanacearum FQY_4)

1e-31

726) ANH9381_0332
( YP_004948106.1 )

3-ketoacyl-ACP reductase

NC_016513
(Aggregatibacter actinomycetemcomitans ANH9381)

1e-31

727) fabG
( YP_001385912.1 )

3-ketoacyl-ACP reductase

NC_009697
(Clostridium botulinum ATCC 19397)

1e-31

728) fabG
( YP_001256079.1 )

3-ketoacyl-ACP reductase

NC_009495
(Clostridium botulinum ATCC 3502)

1e-31

729) fabG
( YP_001389319.1 )

3-ketoacyl-ACP reductase

NC_009698
(Clostridium botulinum Hall)

1e-31

730) fabG
( YP_002806144.1 )

3-ketoacyl-ACP reductase

NC_012563
(Clostridium botulinum Kyoto)

1e-31

731) CtCNB1_0618
( YP_003276660.1 )

short-chain dehydrogenase/reductase SDR

NC_013446
(Comamonas testosteroni CNB-1)

1e-31

732) Cylst_2054
( YP_007146977.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019757
(Cylindrospermum stagnale PCC 7417)

1e-31

733) HBHAL_1416
( YP_006179064.1 )

short-chain dehydrogenase/reductase family protein

NC_017668
(Halobacillus halophilus DSM 2266)

1e-31

734) HPL003_17955
( YP_005076558.1 )

3-oxoacyl-ACP reductase

NC_016641
(Paenibacillus terrae HPL-003)

8e-32

735) CK1_15600
( YP_007783332.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_021014
(Ruminococcus sp. SR1/5)

8e-32

736) fabG
( YP_007629475.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020796
(Edwardsiella tarda C07-087)

9e-32

737) REQ_45140
( YP_004009151.1 )

short chain dehydrogenase

NC_014659
(Rhodococcus equi 103S)

2e-31

738) CC1_24310
( YP_007770495.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_021009
(Coprococcus catus GD/7)

2e-31

739) Saro_0512
( YP_495793.1 )

short-chain dehydrogenase/reductase SDR

NC_007794
(Novosphingobium aromaticivorans DSM 12444)

2e-31

740) Odosp_0672
( YP_004251932.1 )

3-oxoacyl-ACP reductase

NC_015160
(Odoribacter splanchnicus DSM 220712)

2e-31

741) fabg1
( YP_003930540.1 )

3-oxoacyl-ACP reductase

NC_014562
(Pantoea vagans C9-1)

2e-31

742) STHERM_c21540
( YP_003875356.1 )

3-oxoacyl-ACP reductase

NC_014484
(Spirochaeta thermophila DSM 6192)

2e-31

743) Spith_2197
( YP_006046169.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017583
(Spirochaeta thermophila DSM 6578)

2e-31

744) Tnap_1082
( YP_003346583.1 )

3-oxoacyl-ACP reductase

NC_013642
(Thermotoga naphthophila RKU-10)

2e-31

745) Tpet_1020
( YP_001244614.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_009486
(Thermotoga petrophila RKU-1)

2e-31

746) fabG
( YP_005676510.1 )

3-oxoacyl-ACP reductase

NC_017297
(Clostridium botulinum 230613)

2e-31

747) H04402_03699
( YP_005680226.1 )

3-oxoacyl-ACP reductase

NC_017299
(Clostridium botulinum H04402 065)

2e-31

748) fabG
( YP_001392955.1 )

3-ketoacyl-ACP reductase

NC_009699
(Clostridium botulinum Langeland)

2e-31

749) Nmul_A1074
( YP_411769.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_007614
(Nitrosospira multiformis ATCC 25196)

2e-31

750) fabG2
( YP_007892492.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021149
(Azotobacter vinelandii CA)

3e-31

751) fabG2
( YP_007897541.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021150
(Azotobacter vinelandii CA6)

3e-31

752) fabG
( YP_002798682.1 )

3-ketoacyl-ACP reductase

NC_012560
(Azotobacter vinelandii DJ)

3e-31

753) Closa_1125
( YP_003821362.1 )

short-chain dehydrogenase/reductase SDR

NC_014376
(Clostridium saccharolyticum WM1)

3e-31

754) CE2778
( NP_739388.1 )

2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

NC_004369
(Corynebacterium efficiens YS-314)

3e-31

755) Dsui_2448
( YP_005028647.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_016616
(Dechlorosoma suillum PS)

3e-31

756) fabG
( YP_006559536.1 )

3-oxoacyl-ACP reductase

NC_018268
(Marinobacter sp. BSs20148)

3e-31

757) fabG
( YP_001570831.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_010067
(Salmonella enterica RSK2980)

3e-31

758) fabG
( YP_723004.1 )

3-ketoacyl-ACP reductase

NC_008312
(Trichodesmium erythraeum IMS101)

3e-31

759) Dalk_3307
( YP_002432464.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_011768
(Desulfatibacillum alkenivorans AK-01)

4e-31

760) fabG
( YP_008110634.1 )

3-ketoacyl-ACP reductase

NC_021500
(Enterobacter sp. R4-368)

4e-31

761) bbsD
( YP_158076.1 )

subunit of 2-[hydroxy(phenyl)methyl]-succinyl-CoA DH

NC_006513
(Aromatoleum aromaticum EbN1)

4e-31

762) Pat9b_1482
( YP_004115355.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014837
(Pantoea sp. At-9b)

4e-31

763) CFPG_495
( YP_002309169.1 )

3-oxoacyl-ACP reductase

NC_011565
(Candidatus Azobacteroides pseudotrichonymphae CFP2)

5e-31

764) Fleli_3958
( YP_006436053.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_018018
(Flexibacter litoralis DSM 6794)

5e-31

765) fabG
( YP_003468747.1 )

3-oxoacyl-ACP reductase

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-30

766) fabG
( YP_045592.1 )

3-oxoacyl-ACP reductase

NC_005966
(Acinetobacter sp. ADP1)

1e-30

767) Clopa_0961
( YP_007939653.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_021182
(Clostridium pasteurianum BC1)

1e-30

768) fabG
( YP_003741037.1 )

3-oxoacyl-ACP reductase

NC_014306
(Erwinia billingiae Eb661)

6e-31

769) Ssed_3534
( YP_001475266.1 )

3-oxoacyl-ACP reductase

NC_009831
(Shewanella sediminis HAW-EB3)

6e-31

770) fabG
( YP_718374.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_008309
(Haemophilus somnus 129PT)

6e-31

771) Metme_1089
( YP_004512023.1 )

3-oxoacyl-ACP reductase

NC_015572
(Methylomonas methanica MC09)

6e-31

772) A464_1129
( YP_008321725.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_021870
(Salmonella bongori N268-08)

6e-31

773) fabG
( YP_004729915.1 )

3-oxoacyl-ACP reductase

NC_015761
(Salmonella bongori NCTC 12419)

6e-31

774) fabG
( YP_008265393.1 )

3-ketoacyl-ACP reductase

NC_021820
(Salmonella enterica 08-1736)

6e-31

775) fabG
( YP_005236951.1 )

3-ketoacyl-ACP reductase

NC_016856
(Salmonella enterica 14028S)

6e-31

776) fabG
( YP_002226871.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_011274
(Salmonella enterica 287/91)

6e-31

777) SBOV11151
( YP_008504985.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_022241
(Salmonella enterica 3114)

6e-31

778) fabG
( YP_008247101.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021810
(Salmonella enterica 41578)

6e-31

779) fabG
( YP_005396606.1 )

3-oxoacyl-ACP reductase

NC_017046
(Salmonella enterica 798)

6e-31

780) fabG
( YP_002142379.1 )

3-ketoacyl-ACP reductase

NC_011147
(Salmonella enterica AKU12601)

6e-31

781) fabG
( YP_150894.1 )

3-oxoacyl-ACP reductase

NC_006511
(Salmonella enterica ATCC 9150)

6e-31

782) SU5_01821
( YP_006087457.1 )

3-oxoacyl-ACP reductase

NC_017623
(Salmonella enterica B182)

6e-31

783) fabG
( YP_008480682.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_022221
(Salmonella enterica CDC1983-67)

6e-31

784) fabG
( YP_008309032.1 )

3-ketoacyl-ACP reductase

NC_021844
(Salmonella enterica CFSAN000189)

6e-31

785) fabG
( YP_008255611.1 )

3-ketoacyl-ACP reductase

NC_021814
(Salmonella enterica CFSAN001921)

6e-31

786) fabG
( YP_007470891.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020307
(Salmonella enterica CFSAN001992)

6e-31

787) fabG
( YP_008260386.1 )

3-ketoacyl-ACP reductase

NC_021818
(Salmonella enterica CFSAN002050)

6e-31

788) fabG
( YP_008249467.1 )

3-ketoacyl-ACP reductase

NC_021812
(Salmonella enterica CFSAN002069)

6e-31

789) STY1234
( NP_455688.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_003198
(Salmonella enterica CT18)

6e-31

790) fabG
( YP_002215943.1 )

3-ketoacyl-ACP reductase

NC_011205
(Salmonella enterica CT_02021853)

6e-31

791) fabG
( YP_002114194.1 )

3-ketoacyl-ACP reductase

NC_011094
(Salmonella enterica CVM19633)

6e-31

792) STMMW_12041
( YP_005232260.1 )

3-oxoacyl-ACP reductase

NC_016854
(Salmonella enterica D23580)

6e-31

793) fabG
( NP_460165.1 )

3-ketoacyl-ACP reductase

NC_003197
(Salmonella enterica LT2)

6e-31

794) STBHUCCB_18340
( YP_005217378.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_016832
(Salmonella enterica P-stx-12)

6e-31

795) fabG
( YP_002243949.1 )

3-ketoacyl-ACP reductase

NC_011294
(Salmonella enterica P125109)

6e-31

796) fabG
( YP_002638098.1 )

3-ketoacyl-ACP reductase

NC_012125
(Salmonella enterica RKS4594)

6e-31

797) fabG
( YP_005212222.1 )

3-oxoacyl-ACP reductase

NC_016831
(Salmonella enterica RKS5078)

6e-31

798) fabG
( YP_008380437.1 )

3-ketoacyl-ACP reductase

NC_021984
(Salmonella enterica S06004)

6e-31

799) fabG
( YP_005181045.1 )

3-oxoacyl-ACP reductase

NC_016810
(Salmonella enterica SL1344)

6e-31

800) fabG
( YP_002040449.1 )

3-ketoacyl-ACP reductase

NC_011080
(Salmonella enterica SL254)

6e-31

801) fabG
( YP_002045194.1 )

3-ketoacyl-ACP reductase

NC_011083
(Salmonella enterica SL476)

6e-31

802) fabG
( YP_002146848.1 )

3-ketoacyl-ACP reductase

NC_011149
(Salmonella enterica SL483)

6e-31

803) fabg
( YP_005242093.1 )

3-oxoacyl-ACP reductase

NC_016857
(Salmonella enterica ST4/74)

6e-31

804) fabG
( YP_005246910.1 )

3-ketoacyl-[acyl-carrier-protein] reductase

NC_016860
(Salmonella enterica T000240)

6e-31

805) fabG
( NP_805500.1 )

3-ketoacyl-ACP reductase

NC_004631
(Salmonella enterica Ty2)

6e-31

806) fabG
( YP_007926042.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021176
(Salmonella enterica Ty21a)

6e-31

807) fabG
( YP_007901566.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021151
(Salmonella enterica U288)

6e-31

808) fabG
( YP_005251703.1 )

3-ketoacyl-ACP reductase

NC_016863
(Salmonella enterica UK-1)

6e-31

809) SN31241_22630
( YP_008360180.1 )

3-ketoacyl-(Acyl-carrier-protein) reductase

NC_021902
(Salmonella enterica USMARC-S3124.1)

6e-31

810) Spiaf_0248
( YP_005474063.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017098
(Spirochaeta africana DSM 8902)

6e-31

811) HMPREF0669_00317
( YP_008444422.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_022111
(Prevotella sp. F0039)

7e-31

812) fabG
( YP_001907951.1 )

3-ketoacyl-ACP reductase

NC_010694
(Erwinia tasmaniensis Et1/99)

8e-31

813) D782_2651
( YP_007340796.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_020063
(Enterobacteriaceae bacterium FGI 57)

8e-31

814) fabG5
( YP_005959491.1 )

3-oxoacyl-(acyl-carrier protein) reductase

NC_017542
(Paenibacillus polymyxa M1)

8e-31

815) PPSC2_c2051
( YP_003946264.1 )

3-oxoacyl-ACP reductase

NC_014622
(Paenibacillus polymyxa SC2)

8e-31

816) P700755_003869
( YP_006869193.1 )

3-oxoacyl-(acyl-carrier protein) reductase FabG

NC_018721
(Psychroflexus torquis ATCC 700755)

9e-31

817) fabG
( YP_001453528.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_009792
(Citrobacter koseri ATCC BAA-895)

1e-30

818) Mesau_04464
( YP_007306175.1 )

dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein

NC_019973
(Mesorhizobium australicum WSM2073)

1e-30

819) MAB_4680c
( YP_001705402.1 )

Putative short-chain dehydrogenase/reductase

NC_010397
(Mycobacterium abscessus ATCC 19977)

2e-30

820) fabG
( YP_005092479.1 )

3-ketoacyl-ACP reductase

NC_016745
(Oceanimonas sp. GK1)

2e-30

821) fabG
( YP_049897.1 )

3-ketoacyl-ACP reductase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-30

822) BBta_0940
( YP_001237102.1 )

short-chain dehydrogenase

NC_009485
(Bradyrhizobium sp. BTAi1)

2e-30

823) Cseg_2740
( YP_003593807.1 )

short-chain dehydrogenase/reductase SDR

NC_014100
(Caulobacter segnis ATCC 21756)

2e-30

824) fabG
( YP_001438337.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

2e-30

825) fabG
( YP_006343477.1 )

3-ketoacyl-ACP reductase

NC_017933
(Cronobacter sakazakii ES15)

2e-30

826) fabG
( YP_007441006.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020260
(Cronobacter sakazakii Sp291)

2e-30

827) fabG
( YP_003210035.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_013282
(Cronobacter turicensis z3032)

2e-30

828) fabG
( YP_006320007.1 )

3-oxoacyl-ACP reductase

NC_017910
(Escherichia blattae DSM 4481)

2e-30

829) A225_4873
( YP_006500546.1 )

3-oxoacyl-ACP reductase

NC_018106
(Klebsiella oxytoca E718)

2e-30

830) fabG
( YP_003519778.1 )

FabG

NC_013956
(Pantoea ananatis LMG 20103)

2e-30

831) fabG4
( YP_008137918.1 )

3-oxoacyl-[acyl-carrier-protein] reductase FabG

NC_021591
(Serratia odorifera 4Rx13)

2e-30

832) SerAS9_1851
( YP_004505241.1 )

3-oxoacyl-ACP reductase

NC_015567
(Serratia plymuthica AS9)

2e-30

833) fabG
( YP_008158728.1 )

3-ketoacyl-ACP reductase

NC_021659
(Serratia plymuthica S13)

2e-30

834) fabG
( YP_001478137.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_009832
(Serratia proteamaculans 568)

2e-30

835) SerAS12_1851
( YP_004500289.1 )

3-oxoacyl-ACP reductase

NC_015566
(Serratia sp. AS12)

2e-30

836) SerAS13_1852
( YP_006024703.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017573
(Serratia sp. AS13)

2e-30

837) PCC21_026120
( YP_006647268.1 )

3-ketoacyl-ACP reductase

NC_018525
(Pectobacterium carotovorum PCC21)

2e-30

838) W5S_2788
( YP_006283745.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_017845
(Pectobacterium sp. SCC3193)

2e-30

839) fabG
( YP_003260168.1 )

3-ketoacyl-ACP reductase

NC_013421
(Pectobacterium wasabiae WPP163)

2e-30

840) Fjoh_2889
( YP_001195229.1 )

3-oxoacyl-ACP reductase

NC_009441
(Flavobacterium johnsoniae UW101)

3e-30

841) Ilyop_0274
( YP_003966411.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014632
(Ilyobacter polytropus DSM 2926)

3e-30

842) Mic7113_5404
( YP_007124453.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019738
(Microcoleus sp. PCC 7113)

3e-30

843) PC1_2503
( YP_003018070.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_012917
(Pectobacterium carotovorum PC1)

3e-30

844) Theos_1082
( YP_006972229.1 )

dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein

NC_019386
(Thermus oshimai JL-2)

3e-30

845) Acid_4546
( YP_825790.1 )

short-chain dehydrogenase/reductase SDR

NC_008536
(Candidatus Solibacter usitatus Ellin6076)

3e-30

846) UWK_02569
( YP_007468758.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_020304
(Desulfocapsa sulfexigens DSM 10523)

3e-30

847) RHOM_14070
( YP_004839852.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_015977
(Roseburia hominis A2-183)

3e-30

848) fabG
( YP_008229783.1 )

3-ketoacyl-ACP reductase

NC_021741
(Serratia liquefaciens ATCC 27592)

3e-30

849) fabG
( YP_007405685.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_020211
(Serratia marcescens WW4)

3e-30

850) FraEuI1c_6666
( YP_004020506.1 )

short-chain dehydrogenase/reductase SDR

NC_014666
(Frankia sp. EuI1c)

4e-30

851) Cagg_0281
( YP_002461665.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_011831
(Chloroflexus aggregans DSM 9485)

4e-30

852) fabG
( YP_002475433.1 )

3-ketoacyl-ACP reductase

NC_011852
(Haemophilus parasuis SH0165)

4e-30

853) fabG
( YP_008123161.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_021521
(Haemophilus parasuis ZJ0906)

4e-30

854) Mpe_A2921
( YP_001022109.1 )

dehydrogenase

NC_008825
(Methylibium petroleiphilum PM1)

5e-30

855) PGN_1375
( YP_001929491.1 )

beta-ketoacyl-acyl carrier protein reductase

NC_010729
(Porphyromonas gingivalis ATCC 33277)

1e-29

856) fabG
( YP_004509931.1 )

3-oxoacyl-ACP reductase

NC_015571
(Porphyromonas gingivalis TDC60)

1e-29

857) fabG
( NP_905425.1 )

3-oxoacyl-ACP reductase

NC_002950
(Porphyromonas gingivalis W83)

1e-29

858) Rahaq2_2977
( YP_005200942.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_016818
(Rahnella aquatilis CIP 78.65)

1e-29

859) fabG
( YP_005402762.1 )

3-ketoacyl-ACP reductase

NC_017047
(Rahnella aquatilis HX2)

1e-29

860) Rahaq_2955
( YP_004213676.1 )

3-oxoacyl-ACP reductase

NC_015061
(Rahnella sp. Y9602)

1e-29

861) Fraau_1396
( YP_005377508.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017033
(Frateuria aurantia DSM 6220)

5e-30

862) Acfer_1392
( YP_003399067.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_013740
(Acidaminococcus fermentans DSM 20731)

6e-30

863) CAP2UW1_1538
( YP_003166782.1 )

3-oxoacyl-ACP reductase

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

6e-30

864) Ilyop_2112
( YP_003968224.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014633
(Ilyobacter polytropus DSM 2926)

7e-30

865) fabG
( YP_003040540.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

8e-30

866) TTC0394
( YP_004369.1 )

3-oxoacyl-ACP reductase

NC_005835
(Thermus thermophilus HB27)

8e-30

867) FAES_0582
( YP_007319186.1 )

short-chain dehydrogenase/reductase SDR

NC_020054
(Fibrella aestuarina BUZ 2)

8e-30

868) MU9_2728
( YP_007506146.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_020418
(Morganella morganii KT)

9e-30

869) fabG
( YP_006214919.1 )

3-ketoacyl-ACP reductase

NC_017731
(Providencia stuartii MRSN 2154)

1e-29

870) Patl_2122
( YP_661694.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_008228
(Pseudoalteromonas atlantica T6c)

1e-29

871) TTHA0750
( YP_144016.1 )

3-oxoacyl-ACP reductase

NC_006461
(Thermus thermophilus HB8)

2e-29

872) TtJL18_1301
( YP_006058976.1 )

dehydrogenase

NC_017587
(Thermus thermophilus JL-18)

2e-29

873) Ththe16_0757
( YP_005640303.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_017272
(Thermus thermophilus SG0.5JP17-16)

2e-29

874) Celgi_0772
( YP_004599859.1 )

short-chain dehydrogenase/reductase SDR

NC_015671
(Cellvibrio gilvus ATCC 13127)

2e-29

875) CA347_2551
( YP_008129347.1 )

short chain dehydrogenase family protein

NC_021554
(Staphylococcus aureus CA-347)

2e-29

876) fabG
( YP_005933705.1 )

3-oxoacyl-ACP reductase

NC_017531
(Pantoea ananatis AJ13355)

2e-29

877) fabG11
( YP_005196172.1 )

3-oxoacyl-ACP reductase

NC_016816
(Pantoea ananatis LMG 5342)

2e-29

878) PAGR_g2663
( YP_005993381.1 )

3-oxoacyl-ACP reductase

NC_017554
(Pantoea ananatis PA13)

2e-29

879) fabG
( YP_002482510.1 )

3-ketoacyl-ACP reductase

NC_011884
(Cyanothece sp. PCC 7425)

2e-29

880) Mpe_A0638
( YP_001019835.1 )

3-oxoacyl-ACP reductase

NC_008825
(Methylibium petroleiphilum PM1)

3e-29

881) fabG-2
( YP_006890589.1 )

3-oxoacyl-ACP reductase

NC_017454
(Geobacter sulfurreducens KN400)

4e-29

882) fabG-2
( NP_952654.1 )

3-oxoacyl-ACP reductase

NC_002939
(Geobacter sulfurreducens PCA)

4e-29

883) fabG
( YP_008220053.1 )

3-ketoacyl-ACP reductase

NC_021738
(Mannheimia haemolytica D171)

4e-29

884) TCCBUS3UF1_10010
( YP_005654120.1 )

3-oxoacyl-ACP reductase

NC_017278
(Thermus sp. CCB_US3_UF1)

4e-29

885) Swoo_2042
( YP_001760421.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_010506
(Shewanella woodyi ATCC 51908)

5e-29

886) fabG
( YP_003883550.1 )

3-oxoacyl-ACP reductase

NC_014500
(Dickeya dadantii 3937)

5e-29

887) DaAHT2_1286
( YP_003690600.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014216
(Desulfurivibrio alkaliphilus AHT2)

5e-29

888) KPHS_26350
( YP_005226935.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_016845
(Klebsiella pneumoniae HS11286)

5e-29

889) N559_2610
( YP_008425566.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_022082
(Klebsiella pneumoniae JM45)

5e-29

890) fabG
( YP_005954741.1 )

3-ketoacyl-ACP reductase

NC_017540
(Klebsiella pneumoniae KCTC 2242)

5e-29

891) fabG
( YP_007991577.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

5e-29

892) Namu_0877
( YP_003200277.1 )

short-chain dehydrogenase/reductase SDR

NC_013235
(Nakamurella multipartita DSM 44233)

5e-29

893) Dd586_1586
( YP_003333157.1 )

3-oxoacyl-ACP reductase

NC_013592
(Dickeya dadantii Ech586)

6e-29

894) A79E_2527
( YP_006636322.1 )

3-oxoacyl-ACP reductase

NC_018522
(Klebsiella pneumoniae 1084)

6e-29

895) fabG
( YP_002919473.1 )

3-ketoacyl-ACP reductase

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

6e-29

896) AciX9_0137
( YP_004215993.1 )

short-chain dehydrogenase/reductase SDR

NC_015064
(Granulicella tundricola MP5ACTX9)

7e-29

897) fabG
( YP_008234109.1 )

3-ketoacyl-ACP reductase

NC_021743
(Mannheimia haemolytica D153)

7e-29

898) fabG
( YP_008222671.1 )

3-ketoacyl-ACP reductase

NC_021739
(Mannheimia haemolytica D174)

7e-29

899) fabG1
( YP_007882089.1 )

3-oxoacyl-[acyl-carrier-protein] reductase FabG

NC_021082
(Mannheimia haemolytica M42548)

7e-29

900) D650_3580
( YP_007665136.1 )

3-ketoacyl-(Acyl-carrier-protein) reductase

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

7e-29

901) D648_22610
( YP_007669772.1 )

3-ketoacyl-(Acyl-carrier-protein) reductase

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

7e-29

902) fabG
( YP_008339897.1 )

3-ketoacyl-ACP reductase

NC_021883
(Mannheimia haemolytica USMARC_2286)

7e-29

903) fabG
( YP_002522823.1 )

3-oxoacyl-ACP reductase

NC_011959
(Thermomicrobium roseum DSM 5159)

7e-29

904) Aasi_0105
( YP_001957282.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_010830
(Candidatus Amoebophilus asiaticus 5a2)

1e-28

905) fabG
( YP_004753530.1 )

3-oxoacyl-ACP reductase

NC_015856
(Collimonas fungivorans Ter331)

1e-28

906) FraEuI1c_2671
( YP_004016574.1 )

short-chain dehydrogenase/reductase SDR

NC_014666
(Frankia sp. EuI1c)

1e-28

907) Neut_0468
( YP_746710.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_008344
(Nitrosomonas eutropha C91)

1e-28

908) fabG
( YP_006511316.1 )

3-oxoacyl-ACP reductase

NC_018142
(Propionibacterium propionicum F0230a)

1e-28

909) fabG1
( YP_006030146.1 )

3-oxoacyl-ACP reductase

NC_017574
(Ralstonia solanacearum Po82)

1e-28

910) fabG
( YP_001335355.1 )

3-ketoacyl-ACP reductase

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

8e-29

911) OCQ_16430
( YP_005347476.1 )

3-ketoacyl-ACP reductase

NC_016948
(Mycobacterium intracellulare MOTT-64)

9e-29

912) fabG
( YP_003746222.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_014307
(Ralstonia solanacearum CFBP2957)

2e-28

913) fabG_2
( YP_004526662.1 )

3-oxoacyl-ACP reductase

NC_015577
(Treponema azotonutricium ZAS-9)

2e-28

914) Dd703_1587
( YP_002987208.1 )

3-oxoacyl-ACP reductase

NC_012880
(Dickeya dadantii Ech703)

3e-28

915) Mnod_3070
( YP_002498314.1 )

short-chain dehydrogenase/reductase SDR

NC_011894
(Methylobacterium nodulans ORS 2060)

3e-28

916) fabG
( YP_003752979.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_014311
(Ralstonia solanacearum PSI07)

3e-28

917) fabG3
( YP_003977750.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_014640
(Achromobacter xylosoxidans A8)

4e-28

918) DSY2660
( YP_518893.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

4e-28

919) PSJM300_01960
( YP_006522830.1 )

short chain dehydrogenase/reductase family oxidoreductase

NC_018177
(Pseudomonas stutzeri DSM 10701)

6e-28

920) Deipr_1937
( YP_004256686.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_015161
(Deinococcus proteolyticus MRP)

1e-27

921) SABB_01205
( YP_008169570.1 )

putative oxidoreductase

NC_021670
(Staphylococcus aureus Bmb9393)

6e-28

922) SAUSA300_2416
( YP_495051.2 )

glucose 1-dehydrogenase-like protein

NC_007793
(Staphylococcus aureus FPR3757)

6e-28

923) BN843_25120
( YP_007869532.1 )

Oxidoreductase, short chain dehydrogenase/reductase family

NC_021059
(Staphylococcus aureus M1)

6e-28

924) SAOUHSC_02772
( YP_501231.2 )

hypothetical protein

NC_007795
(Staphylococcus aureus NCTC 8325)

6e-28

925) codY
( YP_005753736.1 )

glucose 1-dehydrogenase

NC_017347
(Staphylococcus aureus T0131)

6e-28

926) SATW20_26000
( YP_005732563.1 )

putative short chain dehydrogenase

NC_017331
(Staphylococcus aureus TW20)

6e-28

927) SAVC_11230
( YP_005291828.1 )

glucose 1-dehydrogenase

NC_016912
(Staphylococcus aureus VC40)

6e-28

928) AZC_1961
( YP_001524877.1 )

short chain dehydrogenase

NC_009937
(Azorhizobium caulinodans ORS 571)

7e-28

929) MASE_07910
( YP_006747667.1 )

3-oxoacyl-ACP reductase

NC_018632
(Alteromonas macleodii ATCC 27126)

8e-28

930) Gmet_2249
( YP_006721207.1 )

short-chain dehydrogenase/reductase family oxidoreductase

NC_007517
(Geobacter metallireducens GS-15)

8e-28

931) Meso_3434
( YP_675970.1 )

short-chain dehydrogenase/reductase SDR

NC_008254
(Chelativorans sp. BNC1)

9e-28

932) Ssed_2624
( YP_001474359.1 )

3-oxoacyl-ACP reductase

NC_009831
(Shewanella sediminis HAW-EB3)

1e-27

933) AMBAS45_08495
( YP_006802655.1 )

3-oxoacyl-ACP reductase

NC_018679
(Alteromonas macleodii Balearic Sea AD45)

1e-27

934) AMBLS11_07895
( YP_006824615.1 )

3-oxoacyl-ACP reductase

NC_018692
(Alteromonas macleodii Black Sea 11)

1e-27

935) AMEC673_08000
( YP_006798671.1 )

3-oxoacyl-ACP reductase

NC_018678
(Alteromonas macleodii English Channel 673)

1e-27

936) amad1_09100
( YP_006976684.1 )

3-oxoacyl-ACP reductase

NC_019393
(Alteromonas macleodii AltDE1)

2e-27

937) I633_08990
( YP_008192469.1 )

3-oxoacyl-ACP reductase

NC_021716
(Alteromonas macleodii English Channel 615)

2e-27

938) I607_08015
( YP_008171656.1 )

3-oxoacyl-ACP reductase

NC_021710
(Alteromonas macleodii Ionian Sea U4)

2e-27

939) I876_08280
( YP_008196054.1 )

3-oxoacyl-ACP reductase

NC_021717
(Alteromonas macleodii Ionian Sea U7)

2e-27

940) I634_08385
( YP_008175794.1 )

3-oxoacyl-ACP reductase

NC_021712
(Alteromonas macleodii Ionian Sea U8)

2e-27

941) I636_08815
( YP_008183737.1 )

3-oxoacyl-ACP reductase

NC_021714
(Alteromonas macleodii Ionian Sea UM4b)

2e-27

942) I635_09085
( YP_008179743.1 )

3-oxoacyl-ACP reductase

NC_021713
(Alteromonas macleodii Ionian Sea UM7)

2e-27

943) fabG7
( YP_003979468.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_014640
(Achromobacter xylosoxidans A8)

2e-27

944) Anamo_1485
( YP_006444411.1 )

dehydrogenase

NC_018024
(Anaerobaculum mobile DSM 13181)

2e-27

945) CSSP291_10160
( YP_007440906.1 )

2-deoxy-D-gluconate 3-dehydrogenase

NC_020260
(Cronobacter sakazakii Sp291)

2e-27

946) Rmar_2801
( YP_003292057.1 )

3-oxoacyl-ACP reductase

NC_013501
(Rhodothermus marinus DSM 4252)

2e-27

947) fabG
( YP_004850677.1 )

3-ketoacyl-ACP reductase

NC_016010
(Xanthomonas axonopodis F1)

2e-27

948) fabG
( YP_362877.1 )

3-ketoacyl-ACP reductase

NC_007508
(Xanthomonas campestris 85-10)

2e-27

949) Sfla_6528
( YP_004909450.1 )

short-chain dehydrogenase/reductase SDR

NC_016110
(Streptomyces flavogriseus ATCC 33331)

3e-27

950) kduD2
( YP_006343374.1 )

2-deoxy-D-gluconate 3-dehydrogenase

NC_017933
(Cronobacter sakazakii ES15)

4e-27

951) FraEuI1c_4417
( YP_004018283.1 )

short-chain dehydrogenase/reductase SDR

NC_014666
(Frankia sp. EuI1c)

1e-26

952) Sinac_3785
( YP_007203713.1 )

dehydrogenase

NC_019892
(Singulisphaera acidiphila DSM 18658)

6e-27

953) Osc7112_6622
( YP_007118942.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019730
(Oscillatoria nigro-viridis PCC 7112)

6e-27

954) Sinac_1365
( YP_007201444.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_019892
(Singulisphaera acidiphila DSM 18658)

1e-26

955) fabG
( YP_001226937.1 )

3-oxoacyl-ACP reductase

NC_009482
(Synechococcus sp. RCC307)

1e-26

956) Saro_3420
( YP_001165806.1 )

short-chain dehydrogenase/reductase SDR

NC_009427
(Novosphingobium aromaticivorans DSM 12444)

2e-26

957) Tgr7_1835
( YP_002513903.1 )

3-ketoacyl-ACP reductase

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

2e-26

958) fabG2
( YP_002825187.1 )

3-oxoacyl-ACP reductase

NC_012587
(Sinorhizobium fredii NGR234)

3e-26

959) Bfae_04660
( YP_003153926.1 )

2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase

NC_013172
(Brachybacterium faecium DSM 4810)

4e-26

960) LVISKB_0165
( YP_007653005.1 )

3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase

NC_020819
(Lactobacillus brevis KB290)

6e-26

961) Achl_1767
( YP_002487835.1 )

short-chain dehydrogenase/reductase SDR

NC_011886
(Arthrobacter chlorophenolicus A6)

1e-25

962) A606_01865
( YP_008164890.1 )

2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

NC_021663
(Corynebacterium terpenotabidum Y-11)

1e-25

963) fabG
( NP_641464.1 )

3-ketoacyl-ACP reductase

NC_003919
(Xanthomonas axonopodis 306)

1e-25

964) fabG
( YP_007635605.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_020800
(Xanthomonas axonopodis Xac29-1)

1e-25

965) BCO26_1813
( YP_004569258.1 )

short-chain dehydrogenase/reductase SDR

NC_015634
(Bacillus coagulans 2-6)

8e-26

966) fabG
( YP_007649228.1 )

Dehydrogenase

NC_020815
(Xanthomonas citri Aw12879)

8e-26

967) YM304_35170
( YP_007565769.1 )

putative oxidoreductase

NC_020520
(Ilumatobacter coccineum YM16-304)

3e-25

968) fabG
( YP_001667731.1 )

3-ketoacyl-ACP reductase

NC_010322
(Pseudomonas putida GB-1)

3e-25

969) fabG
( YP_008114911.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_021505
(Pseudomonas putida NBRC 14164)

3e-25

970) fabG
( YP_008093236.1 )

3-ketoacyl-ACP reductase

NC_021491
(Pseudomonas putida H8234)

4e-25

971) fabG
( YP_006531941.1 )

3-ketoacyl

NC_018220
(Pseudomonas putida DOT-T1E)

5e-25

972) fabG
( NP_744068.1 )

3-ketoacyl-ACP reductase

NC_002947
(Pseudomonas putida KT2440)

5e-25

973) fabG
( YP_007228355.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_019905
(Pseudomonas putida PC9)

5e-25

974) PPS_1547
( YP_004701002.1 )

3-ketoacyl-ACP reductase

NC_015733
(Pseudomonas putida S16)

5e-25

975) Despr_2011
( YP_004195450.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_014972
(Desulfobulbus propionicus DSM 2032)

1e-24

976) fabG
( YP_004883438.1 )

3-oxoacyl-[acyl-carrier-protein] reductase

NC_016048
(Oscillibacter valericigenes Sjm18-20)

1e-24

977) fabG
( YP_001748399.1 )

3-ketoacyl-ACP reductase

NC_010501
(Pseudomonas putida W619)

6e-25

978) TASI_0538
( YP_004874336.1 )

3-oxoacyl-ACP reductase

NC_016043
(Taylorella asinigenitalis MCE3)

6e-25

979) fabG_2
( YP_005931503.1 )

FabG_2

NC_017530
(Pseudomonas putida BIRD-1)

8e-25

980) fabG
( YP_001269108.1 )

3-ketoacyl-ACP reductase

NC_009512
(Pseudomonas putida F1)

8e-25

981) YSA_01907
( YP_006384922.1 )

3-ketoacyl- reductase

NC_017986
(Pseudomonas putida ND6)

8e-25

982) Varpa_1532
( YP_004153854.1 )

3-oxoacyL-(acyL-carrier-protein) reductase

NC_014931
(Variovorax paradoxus EPS)

9e-25

983) Aave_2790
( YP_971132.1 )

short-chain dehydrogenase/reductase SDR

NC_008752
(Acidovorax citrulli AAC00-1)

1e-24

984) fabG
( YP_007552127.1 )

3-ketoacyl-[acyl-carrier-protein] reductase

NC_020516
(Azoarcus sp. KH32C)

2e-24

985) Acav_2471
( YP_004234950.1 )

3-oxoacyl-ACP reductase

NC_015138
(Acidovorax avenae ATCC 19860)

2e-24

986) B5T_01632
( YP_006820254.1 )

short-chain dehydrogenase

NC_018691
(Alcanivorax dieselolei B5)

2e-24

987) ambt_09985
( YP_004467325.1 )

3-oxoacyl-ACP reductase

NC_015554
(Alteromonas sp. SN2)

2e-24

988) Desru_1733
( YP_004545283.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_015589
(Desulfotomaculum ruminis DSM 2154)

2e-24

989) Pnap_3072
( YP_983292.1 )

3-oxoacyl-(acyl-carrier-protein) reductase

NC_008781
(Polaromonas naphthalenivorans CJ2)

2e-24

990) MDS_1682
( YP_004379465.1 )

3-ketoacyl-ACP reductase

NC_015410
(Pseudomonas mendocina NK-01)

2e-24

991) fabG
( YP_007821536.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_021033
(Taylorella asinigenitalis 14/45)

3e-24

992) Franean1_3233
( YP_001507546.1 )

short-chain dehydrogenase/reductase SDR

NC_009921
(Frankia sp. EAN1.pec)

1e-23

993) MASS_4710
( YP_008025176.1 )

3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase

NC_021282
(Mycobacterium abscessus 50594)

6e-24

994) MYCMA_2579
( YP_006522313.1 )

3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase

NC_018150
(Mycobacterium abscessus GO 06)

6e-24

995) B446_26935
( YP_008389006.1 )

3-oxoacyl-ACP reductase

NC_021985
(Streptomyces collinus Tu 365)

7e-24

996) fabG3
( YP_004202640.1 )

3-oxoacyl-ACP reductase

NC_014974
(Thermus scotoductus SA-01)

8e-24

997) TVNIR_2307
( YP_007217434.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_019902
(Thioalkalivibrio nitratireducens DSM 14787)

8e-24

998) Caur_2733
( YP_001636327.1 )

short-chain dehydrogenase/reductase SDR

NC_010175
(Chloroflexus aurantiacus J-10-fl)

2e-23

999) Chy400_2957
( YP_002570669.1 )

short-chain dehydrogenase/reductase SDR

NC_012032
(Chloroflexus sp. Y-400-fl)

2e-23

1000) Mfla_1505
( YP_545614.1 )

3-oxoacyl-ACP reductase

NC_007947
(Methylobacillus flagellatus KT)

2e-23

1001) fabG
( YP_785644.1 )

3-ketoacyl-(acyl-carrier-protein) reductase

NC_010645
(Bordetella avium 197N)

3e-23

1002) Hbor_34580
( YP_004038115.1 )

short-chain alcohol dehydrogenase

NC_014731
(Halogeometricum borinquense DSM 11551)

3e-23

1003) 3SC5B7.15c
( NP_625041.1 )

oxidoreductase

NC_003888
(Streptomyces coelicolor A3(2))

1e-22

1004) CLDAP_15130
( YP_005441450.1 )

putative oxidoreductase

NC_017079
(Caldilinea aerophila DSM 14535)

1e-22

1005) fabG
( YP_160131.1 )

3-ketoacyl-ACP reductase

NC_006513
(Aromatoleum aromaticum EbN1)

2e-22

1006) fabG
( YP_933129.1 )

3-ketoacyl-ACP reductase

NC_008702
(Azoarcus sp. BH72)

5e-22

1007) fabG
( YP_008158258.1 )

3-ketoacyl-ACP reductase

NC_021659
(Serratia plymuthica S13)

7e-22

1008) nodG
( YP_008137485.1 )

nodulation protein G

NC_021591
(Serratia odorifera 4Rx13)

9e-22

1009) Caul_2722
( YP_001684347.1 )

short-chain dehydrogenase/reductase SDR

NC_010338
(Caulobacter sp. K31)

1e-21

1010) PPUBIRD1_2624
( YP_005930454.1 )

short-chain dehydrogenase

NC_017530
(Pseudomonas putida BIRD-1)

2e-21

1011) NOCYR_2311
( YP_005263724.1 )

3-oxoacyl-ACP reductase

NC_016887
(Nocardia cyriacigeorgica GUH-2)

2e-21

1012) NH44784_026741
( YP_008029759.1 )

3-oxoacyl-[acyl-carrier protein] reductase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

3e-21

1013) fabG
( YP_006970690.1 )

3-oxoacyl-ACP reductase

NC_019382
(Bordetella bronchiseptica 253)

3e-21

1014) RHA1_ro01501
( YP_701473.1 )

3-oxoacyl-ACP reductase

NC_008268
(Rhodococcus jostii RHA1)

4e-21

1015) Saro_3667
( YP_001166052.1 )

short-chain dehydrogenase/reductase SDR

NC_009427
(Novosphingobium aromaticivorans DSM 12444)

5e-21

1016) fabG
( YP_006558811.1 )

3-oxoacyl-ACP reductase

NC_018268
(Marinobacter sp. BSs20148)

6e-21

1017) Xaut_2691
( YP_001417589.1 )

short-chain dehydrogenase/reductase SDR

NC_009720
(Xanthobacter autotrophicus Py2)

1e-20

1018) Smlt2604
( YP_001972375.1 )

3-oxoacyl-[acyl carrier protein] reductase

NC_010943
(Stenotrophomonas maltophilia K279a)

1e-20

1019) Rcas_1253
( YP_001431368.1 )

2-deoxy-D-gluconate 3-dehydrogenase

NC_009767
(Roseiflexus castenholzii DSM 13941)

1e-20

1020) fabG
( YP_006901655.1 )

3-oxoacyl-ACP reductase

NC_018829
(Bordetella bronchiseptica MO149)

1e-20

1021) fabG
( NP_890291.1 )

3-ketoacyl-ACP reductase

NC_002927
(Bordetella bronchiseptica RB50)

1e-20

1022) fabG
( NP_885472.1 )

3-ketoacyl-ACP reductase

NC_002928
(Bordetella parapertussis 12822)

1e-20

1023) fabG
( YP_006897079.1 )

3-oxoacyl-ACP reductase

NC_018828
(Bordetella parapertussis Bpp5)

1e-20

1024) fabG
( YP_006627170.1 )

3-oxoacyl-ACP reductase

NC_018518
(Bordetella pertussis 18323)

1e-20

1025) fabG
( YP_005590459.1 )

3-ketoacyl-ACP reductase

NC_017223
(Bordetella pertussis CS)

1e-20

1026) fabG
( NP_881069.1 )

3-ketoacyl-ACP reductase

NC_002929
(Bordetella pertussis Tohama I)

1e-20

1027) T1E_5677
( YP_006536292.1 )

short-chain dehydrogenase/reductase SDR

NC_018220
(Pseudomonas putida DOT-T1E)

2e-20

1028) Snas_2912
( YP_003511680.1 )

short-chain dehydrogenase/reductase SDR

NC_013947
(Stackebrandtia nassauensis DSM 44728)

2e-20

1029) PT7_1693
( YP_004416857.1 )

3-ketoacyl-ACP reductase

NC_015458
(Pusillimonas sp. T7-7)

4e-20

1030) fabG
( YP_006183723.1 )

3-oxoacyl-ACP reductase

NC_017671
(Stenotrophomonas maltophilia D457)

8e-20

1031) fabG
( YP_001970905.1 )

3-ketoacyl-ACP reductase

NC_010943
(Stenotrophomonas maltophilia K279a)

9e-20

1032) Acid_7390
( YP_828584.1 )

3-oxoacyl-ACP reductase

NC_008536
(Candidatus Solibacter usitatus Ellin6076)

1e-19

1033) SBI_04380
( YP_004962631.1 )

oxidoreductase

NC_016582
(Streptomyces bingchenggensis BCW-1)

2e-19

1034) BBR47_57630
( YP_002775244.1 )

short chain dehydrogenase

NC_012491
(Brevibacillus brevis NBRC 100599)

3e-19

1035) XNR_2050
( YP_007745430.1 )

Oxidoreductase

NC_020990
(Streptomyces albus J1074)

1e-18

1036) ebA309
( YP_157184.1 )

dehydrogenase

NC_006513
(Aromatoleum aromaticum EbN1)

2e-18

1037) CMN_00047
( YP_007684404.1 )

short-chain dehydrogenase/reductase

NC_020891
(Clavibacter michiganensis NCPPB 2581)

9e-18

1038) FraEuI1c_3085
( YP_004016978.1 )

short-chain dehydrogenase/reductase SDR

NC_014666
(Frankia sp. EuI1c)

2e-13

• Sequence Alignments

1) PputUW4_02106 in NC_019670


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  350 bits (1314),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 226/249 (91%), Positives = 243/249 (98%), Gaps = 0/249 (0%)

Query  1    MLLKGKVAIITGAASARGIGRATATTFAQQGARVVILDLDESAARDAAASLGEGHLGLAA  60
            MLL+GK+AIITGAAS RGIGRATA TFAQ+GARVVILDLDESAARDAAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADESQVQRAVAKIIEHFGRIDILVNNAGITQPLKTLDIRPSDYDKVLDVSLRGTLLMS  120
            NVADESQV++AVA IIEHFGRID+LVNNAGITQP+KTLDIRP+DYDKVLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPMMRQQSGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDKVRV  180
            QAVIP MR Q++GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSIAPGLIHTDITGGLMQDERRHAIIDGIPLGRLGEAQDVANAALFLASDLSSYLTGITL  240
            NSIAPGLIHTDITGGLMQDERRHAII+GIPLGRLG AQDVANAALFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

2) Pfl01_2721 in NC_007492


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  327 bits (1228),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 228/249 (92%), Positives = 242/249 (98%), Gaps = 0/249 (0%)

Query  1    MLLQGKVAIITGAASARGIGRATATTFAQHGAWVVIldldasaardaaaslGEGHLGLAA  60
            MLLQGK+AIITGAAS RGIGRATA TFAQHGA+VVILDLD SAARDAAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADESQVQQAVATVIEHFGRIDILVNNAGITQPLKTLDIRPGDYDKVLDVSLRGTLQMS  120
            NVADESQV+QAVAT+IEHFGRID+LVNNAGITQP+KTLDIRPGDYDKVLDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPLMRQQASGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAVIP MR Q+SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSIAPGLIHTDITGGLMQDERRHAIIDGIPLGRLGEAQDVANAALFLASDLSSYLTGITL  240
            NSIAPGLIHTDITGGLMQDERRHAII+GIPLGRLG AQDVANAALFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

3) PSEBR_a3040 in NC_015379


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  326 bits (1222),  Expect = 6e-91, Method: Compositional matrix adjust.
 Identities = 230/249 (93%), Positives = 244/249 (98%), Gaps = 0/249 (0%)

Query  1    MLLQGKVAIITGAASERGIGRATAVTFAKHGARVVIldldesaasdaaatlgegHLGLAA  60
            MLLQGK+AIITGAASERGIGRATAVTFA+HGARVVILDLDESAA DAAATLGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVKAAVAKVIEHYGRIDILINNAGITQPIKTLDIRPSDYDKVLDVSLRGTLLMS  120
            NVADE QVK AVA +IEH+GRID+L+NNAGITQPIKTLDIRP+DYDKVLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPVMRTQASGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglgkamaREFGADNIRV  180
            QAVIP MR+Q+SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG+D+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIHTDITGGLMQDERRHAIIESIPLGRLGAAQDVANAALFLASDLSSYLTGITL  240
            NSI+PGLIHTDITGGLMQDERRHAIIE+IPLGRLGAAQDVANAALFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

4) Psefu_3760 in NC_015556


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  323 bits (1211),  Expect = 5e-90, Method: Compositional matrix adjust.
 Identities = 202/249 (82%), Positives = 237/249 (96%), Gaps = 0/249 (0%)

Query  1    MLLQGKIAIVTGAASPRGIGRATAQAFAEQGARVIIIDLDLTAAREAAAQLGEGHLGLAA  60
            MLLQGKIAI+TGAAS RGIGRATA +FA++GARV+I+DLD +AAR+AAA LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEAQVRDAVAQALGHYGRIDVLVNNAGITQPVKTLEITGKDYDRILDVNLRGTLLMS  120
            NVADE+QV++AVA  + H+GRIDVLVNNAGITQP+KTL+I   DYD++LDV+LRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMRSQKAGSIICMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADNVRV  180
            QAV+P+MR+Q +GSI+CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+D++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLIHDERRHAIIDGIPLGRLGDARDVANAALFLASDLSSYLTGITL  240
            NS++PGLI+TDITGGL++DERRHAII+GIPLGRLG A+DVANAALFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

5) AOLE_14505 in NC_014259


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  321 bits (1205),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 198/249 (80%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDITQSQNAAKALGEGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALEHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   +EH+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIHTDITGGLMNDERRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLIHTDITGGLM+DERRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

6) ABD1_09210 in NC_020547


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  320 bits (1199),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 195/249 (79%), Positives = 234/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGEGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

7) y4mP in NC_016603


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  319 bits (1196),  Expect = 7e-89, Method: Compositional matrix adjust.
 Identities = 195/249 (79%), Positives = 235/249 (95%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGEGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKVAVEQALQHYGKIDILINNAGITQPVKTLDIQRSDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+ +DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

8) AB57_1044 in NC_011586


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1194),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 196/249 (79%), Positives = 234/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGEGHMGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LGEGH+GLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPIKTLDIQRSDYDRVLDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQPIKTLDI+ +DYD+VLDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

9) ABBFA_002643 in NC_011595


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1194),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 196/249 (79%), Positives = 234/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGEGHMGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LGEGH+GLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPIKTLDIQRSDYDRVLDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQPIKTLDI+ +DYD+VLDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

10) A1S_0967 in NC_009085


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1192),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 196/249 (79%), Positives = 234/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGEGHIGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LGEGH+GLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPIKTLDIQRSDYDRVLDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQPIKTLDI+ +DYD+VLDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

11) ABAYE2826 in NC_010410


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1194),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 196/249 (79%), Positives = 234/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGEGHMGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LGEGH+GLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPIKTLDIQRSDYDRVLDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQPIKTLDI+ +DYD+VLDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

12) ABK1_0953 in NC_017162


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1193),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/249 (78%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LG+GHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

13) ACICU_00929 in NC_010611


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1193),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/249 (78%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LG+GHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

14) BJAB07104_01064 in NC_021726


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1193),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/249 (78%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LG+GHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

15) BJAB0868_01078 in NC_021729


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1193),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/249 (78%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LG+GHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

16) ABTJ_02843 in NC_017847


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1193),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/249 (78%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LG+GHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

17) ABZJ_01070 in NC_017171


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1193),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/249 (78%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LG+GHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

18) ABTW07_1058 in NC_017387


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1193),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/249 (78%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LG+GHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

19) M3Q_1266 in NC_018706


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  318 bits (1193),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/249 (78%), Positives = 233/249 (94%), Gaps = 0/249 (0%)

Query  1    MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA  60
            MLLQGK+A+ITGAASERGIGRATA  FAQ+GA+V+I+DLD + +++AA +LG+GHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS  120
            NVA+E QVK AV   ++H+G+ID+L+NNAGITQP+KTLDI+  DYD++LDVSLRGTL+MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDQIRV  180
            QAVIP+M+A+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG DQIR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL  240
            NS++PGLI+TDITGGLM+D+RRH I+ GIPLGRLG AQDVANAALFLASDLS+YLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

20) fabG3 in NC_014258


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  317 bits (1190),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 192/249 (78%), Positives = 227/249 (92%), Gaps = 0/249 (0%)

Query  1    MLLENKVVIITGAASQRGIGRATAACFAQHGARVVVldldlqaaqasalsCGDGHLGLAT  60
            MLL+ K+ IITGAAS+RGIGRATA  FAQHGARVV+LDLD  AA+ +A + G+GHLGLA+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDPLSIHRAIDQVLEHYGRIDVLVNNAGITQPVKTLEIGIEDYNRILDVNLRGTLLMS  120
            +V+D   + +A+  ++EH+GRIDVLVNNAGITQP+KTL+I   DY+++LDV+LRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMQRQKSGSIVCLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMAREFGPDQIRI  180
            QAVIPTM+ Q SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL KAMAREFGPDQIRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NALTPGLIQTDITGGLLQDERRHAILDSIPLGRLGTASDVANAALFLASDLSGYLTGITL  240
            N+++PGLI+TDITGGL+QDERRHAI+++IPLGRLG+A DVANAALFLASDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

21) D781_2336 in NC_020064


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  317 bits (1188),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 208/249 (84%), Positives = 230/249 (93%), Gaps = 0/249 (0%)

Query  1    MLLNNKIAVITGAASERGIGRATAACFATQGARVAILDLDRhaaahaaqqLGDGHLGLAV  60
            MLL+ KIA+ITGAASERGIGRATA  FA +GARV ILDLD  AA +AA  LG+GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVADPQAVNQAVAQILEHYGRIDVLVNNAGITQPVKTLEIGMQDYDRVLDVSLRGTLLMS  120
            +VAD   V+QAVA I+EH+GRIDVLVNNAGITQP+KTL+I   DYD+VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPAMRANGGGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaREFAPEQIRI  180
            QAVIP+MRA+G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREF+P+QIRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGGLMQDERRHAIIDGIPLGRLGNAQDVANAALFLASDLSSYLTGITL  240
            NSI+PGLI+TDITGGLMQDERRHAII+GIPLGRLG AQDVANAALFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

22) PSPPH_1258 in NC_005773


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  307 bits (1149),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 233/249 (94%), Positives = 245/249 (99%), Gaps = 0/249 (0%)

Query  1    MLLQGKIAVITGAASERGIGRATAVTFARHGARVVIIDLDESaardaaaalgeghlglaa  60
            MLLQGKIA+ITGAASERGIGRATAVTFA+HGARVVI+DLDESAARDAAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEKQVHEAVSKIIAHYGRIDILVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  120
            NVADE QV +AV+ II H+GRID+LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQssgsivcmssvsAQRGGGIFGGPHYSaakagvlglgkamaREFGPDQVRV  180
            QAVIPTMRAQ+SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ+R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSIAPGLIHTDITGGLMQDERRHAIIDGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  240
            NSIAPGLIHTDITGGLMQDERRHAII+GIPLGRLGAAQDVANAALFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

23) KPN_00827 in NC_009648


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  303 bits (1136),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 180/249 (73%), Positives = 219/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNGEASKTAAAALGEDHLGLAA  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGE+HLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAIDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

24) ROD_07991 in NC_013716


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  297 bits (1112),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 177/249 (72%), Positives = 212/249 (86%), Gaps = 0/249 (0%)

Query  1    MLLKNKVAIVTGAASVRGLGFATAKLFAENGAKVVIIDLNKEASAAAAKSLGDEHLGLAA  60
            MLL+ K+AI+TGAAS RG+G ATA  FA++GA+VVI+DL+  A+  AA +LG+ HLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEAQVSAAMEQIVAKYGRVDVLVNNAGITQPIKLMDIKRENYDAVLDVSLRGTLLMS  120
            NVADE+QV  A+  I+  +GR+DVLVNNAGITQPIK +DI+  +YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPLMRKQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIP MR Q SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDEMTANILAGIPMNRLGDAVDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + DE    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

25) PCC21_021960 in NC_018525


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 187/249 (76%), Positives = 219/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKNKVAVITGAASPRGLGFATAKLFAENGAHVVIIDLDEAASEKAAASLGDKHLGLKA  60
            MLL+ K+A+ITGAAS RG+G ATA  FA++GA+VVI+DLDE+A+  AAA+LG+ HLGL A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVSDEQQVHAAIEQIIAKFGRIDVLVNNAGITQPIKTLDIKRDNYDAVLDVSLRGTLLMS  120
            NV+DE QV  A+  II  FGRIDVLVNNAGITQPIKTLDI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPVMRAQNKGSIVCISSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPDNIRV  180
            QAVIP MRAQ  GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGPD+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NAITPGLIQTDITAGKLTDEMKTSILAGIPLNRLGDAIDIAQATLFLASDLSSYSTGITL  240
            N+I+PGLI+TDIT+G + DE + +I+ GIPL RLG A D+A+A+LFLASDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

26) Mnod_4381 in NC_011894


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  287 bits (1076),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 174/249 (70%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  6    LLLSDKVCLITGAASLRGIGRATARLFAEHGGRVVILDLDAGQAEAAASDLGAGHLGLAC  65
            +LL +K+ +ITGAAS RGIGRATA  FA+HG+RVVILDLD + A  AA+ LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  66   NVTDRAACQAAADETLARFGRIDVLVNNAGITQPLKIMDIAPENYDAVTDVNLRGTLYMS  125
            NV+D +  + A    + +FGRIDVLVNNAGITQP+K +DI P +YD V DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  126  QAVIPQMRAQKSGSIVCMSSVSAQRGGGIFGGPHYSAAKGGVLGLCKAMARELGPDGIRA  185
            QAVIP MRAQ SGSIVCMSSVSAQRGGGIFGGPHYSAAK+GVLGL KAMARE+GPD IR 
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  186  NAVTPGLIQTDITGGKLTADLKAEILKGIPLGRLGVADDVAKACLFLASDLSAYTTGAVI  245
            N+++PGLI+TDITGG +  + +  I+ GIPLGRLG A+DVA+A LFLASDLS+Y TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  246  DVNGGMLIH  254
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

27) Reut_B4775 in NC_007348


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  287 bits (1073),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 172/249 (70%), Positives = 210/249 (85%), Gaps = 0/249 (0%)

Query  1    MLVENKVIIVTGAASPRGIGKATARALSAQGAHVVILDLKLEEAQSAAAELGPRHLGLAC  60
            ML++ K+ I+TGAAS RGIG+ATA +++ +GA+VVILDL    A+ AAA LG  HLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKAACERAALAVVERFGRIDGLVNNAGITQPLRTLDIQAANFDAVVDVNLRGTLYMS  120
            +V+D +   +A  +++E+FGRID LVNNAGITQP++TLDI+++++D V+DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPQMKEQKRGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLARAMAREFGGDGIRV  180
            QAV+P M+ Q  GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL++AMAREFG D IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTADMRADIIKGIPLGRLGDAGDVANACLFLASDLSSYLTGITL  240
            NSI+PGLI+TDITG+ +  + R  II GIPLGRLG A DVANA LFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

28) M446_2746 in NC_010511


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  284 bits (1062),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 170/249 (69%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLSDKVCLITGAASLRGIGRATARLFAEQGGRVVVLDLDAGQAEEAARAIGAGHLGLAC  60
            MLL +K+ +ITGAAS RGIGRATA  FA++G+RVV+LDLD + A +AA ++G GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDRKACQAAADEAVARLGRIDVLVNNAGITQPLRIMDIAPENYDAVTDVNLRGTLYMS  120
            +V+D    + A    + ++GRIDVLVNNAGITQP++ +DI P +YD V DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPQMRAQKSGSIVCMSSVSAQRGGGIFGGPHYSAAKGGVLGLCKAMARELGPDGIRA  180
            QAVIP MRAQ SGSIVCMSSVSAQRGGGIFGGPHYSAAK+GVLGL KAMARE+GPD IR 
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NAVTPGLIQTDITGGKLTDELKAEIVKGIPLARLGVAEDVAKACLFLASDLSAYTTGAVI  240
            N+++PGLI+TDITGG + DE +  I+ GIPL+RLG A+DVA+A LFLASDLS+Y TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

29) B479_17290 in NC_019905


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  282 bits (1054),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 207/249 (84%), Positives = 236/249 (95%), Gaps = 0/249 (0%)

Query  1    MLLTGKFAVITGAASARGIGRataqafaaqgakvaILdldasaateaaaslgegHLGVAA  60
            MLL GK+A+ITGAAS RGIGRATA +FA +GA+V ILDLD SAA +AAA+LGEGHLG+AA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEAQVRDAIAQVLAQFGRIDVLVNNAGITQPVKTLEITGADYDRILNVNLRGTLLMS  120
            NVADE+QV++A+A ++ +FGRIDVLVNNAGITQP+KTL+I  +DYD++L+V+LRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQRAGSIICMSSVSAQRGGGIFGGPHYSaakagvlglgkamaRELGPDNIRV  180
            QAVIPTMRAQ +GSI+CMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE+GPD+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIHTDITGGLMQDERRHAIIEGIPLGRLGEARDVANAALFLASDLSSYLTGITL  240
            NSI+PGLIHTDITGGLMQDERRHAIIEGIPLGRLG A+DVANAALFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

30) PPS_3478 in NC_015733


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  282 bits (1054),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 207/249 (84%), Positives = 236/249 (95%), Gaps = 0/249 (0%)

Query  1    MLLTGKFAVITGAASARGIGRataqafaaqgakvaILdldasaateaaaslgegHLGVAA  60
            MLL GK+A+ITGAAS RGIGRATA +FA +GA+V ILDLD SAA +AAA+LGEGHLG+AA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEAQVRDAIAQVLAQFGRIDVLVNNAGITQPVKTLEITGADYDRILNVNLRGTLLMS  120
            NVADE+QV++A+A ++ +FGRIDVLVNNAGITQP+KTL+I  +DYD++L+V+LRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQRAGSIICMSSVSAQRGGGIFGGPHYSaakagvlglgkamaRELGPDNIRV  180
            QAVIPTMRAQ +GSI+CMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE+GPD+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIHTDITGGLMQDERRHAIIEGIPLGRLGEARDVANAALFLASDLSSYLTGITL  240
            NSI+PGLIHTDITGGLMQDERRHAIIEGIPLGRLG A+DVANAALFLASDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

31) N559_3508 in NC_022082


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  281 bits (1053),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 181/253 (72%), Positives = 221/253 (88%), Gaps = 0/253 (0%)

Query  3    WSETMLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNGEASKTaaaalgeghl  62
            ++  MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGEGHL
Sbjct  40   RTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL  99

Query  63   glaaNVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGT  122
            GLAANVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  123  LLMSQAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPD  182
            LLMSQAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  183  NVRVNCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAIDIARAALFLGSDLSSYST  242
            ++R+N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  243  GITLDVNGGMLIH  255
            GITLDVNGGMLIH
Sbjct  280  GITLDVNGGMLIH  292

32) A79E_3415 in NC_018522


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  280 bits (1048),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 181/249 (73%), Positives = 219/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNGEASKTaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAIDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

33) KPHS_16560 in NC_016845


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  280 bits (1048),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 181/249 (73%), Positives = 219/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNGEASKTaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAIDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

34) KP1_1782 in NC_012731


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  280 bits (1048),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 181/249 (73%), Positives = 219/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNGEASKTaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAIDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

35) KPR_3761 in NC_021232


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  280 bits (1048),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 181/249 (73%), Positives = 219/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNGEASKTaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAIDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

36) KPK_3744 in NC_011283


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  280 bits (1047),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 181/249 (73%), Positives = 219/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFADNGAKVVIIDLNGEASKTaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAVDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

37) KPN2242_06945 in NC_017540


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  280 bits (1046),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 181/249 (73%), Positives = 218/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNGEASKTaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMDIKRTNYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+  +YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAIDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

38) Kvar_3554 in NC_013850


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  280 bits (1046),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 180/249 (73%), Positives = 219/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFADNGAKVVIIDLNGEASKTaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMEIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K ++I+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAVDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

39) fabG in NC_016514


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  279 bits (1044),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 182/249 (74%), Positives = 221/249 (89%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAVITGAASVRGLGFATAKLYAEQGAKVVIIDLDAEASQRAAACLGEGHLGLAA  60
            MLL++K+A+ITGAAS RG+G ATA  +A++GA+VVI+DLD  A++ AAA LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVSNELQVNAAIEQVLGKYGRIDILVNNAGITQPLKLMDIKRDNYDAVLDVSLRGTLLMS  120
            NV++E QV+ A+  ++  +GRID+LVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTLRAQKSGSIVCISSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAVIPT+RAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLSDEMKTAILAGIPLNRLGDAQDVARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + DE + AI+ GIPL RLG AQDVA AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

40) CNE_BB1p07950 in NC_015727


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  277 bits (1035),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 174/249 (70%), Positives = 211/249 (85%), Gaps = 0/249 (0%)

Query  1    MLVENNVVIITGAASPRGIgkatakafaaqgaSVVILDLRLEDAQAAASELGDQHLGLAC  60
            ML++ ++ IITGAAS RGIG+ATA +FA +GA VVILDL    A+ AA+ LG+ HLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKAACERAAQAVLQRYGRIDALVNNAGITQPVRTLDIQAGNYDAVLDVNLRGTLYMS  120
            +V+D +   +A  ++++++GRID LVNNAGITQP++TLDI++G+YD VLDV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPQMREQKRGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLARAMAREFGADGIRI  180
            QAV+P MR Q  GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL++AMAREFG+D IRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPEMRADIIKGIPLGRLGNAIDVANACVFLASDMSAYLTGITL  240
            NSI+PGLI+TDITG+ +  E R  II GIPLGRLG A DVANA +FLASD+S+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

41) fabG in NC_021818


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  274 bits (1026),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 180/249 (73%), Positives = 217/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNgeaseaaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A+  AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQIMAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPVMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIP MRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDEMTANILAGIPMNRLGDAVDIARAALFLGSDLASYSTGITL  240
            N I+PGLI+TDIT+G + DE    I+ GIP+ RLG A D+A AALFL+SDL+SY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

42) SPAB_02690 in NC_010102


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  274 bits (1025),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 179/249 (72%), Positives = 217/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGAKVVIIDLNgeaseaaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVI+DL+  A+  AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQIMAKYGRVDVLVNNAGITQPLKLMDIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K +DI+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPVMRAQKSGSIVCISSISAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIP MRAQ SGSIVC+SS+SAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDEMTANILAGIPMNRLGDAVDIARAALFLGSDLASYSTGITL  240
            N I+PGLI+TDIT+G + DE    I+ GIP+ RLG A D+A AALFL+SDL+SY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

43) ECL_03994 in NC_014121


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  272 bits (1017),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 183/249 (74%), Positives = 218/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAVITGAASVRGLGFATAKLYAGQGAKVVIIDLDaeasraaaaNLGEEHLGLAA  60
            MLL++K+A+ITGAAS RG+G ATA  +A +GA+VVI+DLD  A+R AAA LGE HLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVSNELQVNAAIEQVLGKYGRIDILVNNAGITQPIKLMDIKRENYDAVLDVSLRGTLLMS  120
            NV++E QV+ A+  ++  +GRID+LVNNAGITQPIK +DI+  +YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQQSGSIVCISSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLSDEMKTAILAGIPLNRLGDAQDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + DE + AI+ GIPL RLG AQD+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

44) A3UG_17515 in NC_018079


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  272 bits (1019),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 182/249 (74%), Positives = 218/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAVITGAASVRGLGFATAKLFAGQGAKVVIIDLDaeasraaaaNLGEEHLGLAA  60
            MLL++K+A+ITGAAS RG+G ATA  FA +GA+VVI+DLD  A+R AAA LGE HLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVSNELQVNAAIEQVLGKYGRIDILVNNAGITQPIKLMEIKRENYDAVLDVSLRGTLLMS  120
            NV++E QV+ A+  ++  +GRID+LVNNAGITQPIK ++I+  +YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLSDEMKTTILAGIPLNRLGDAQDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + DE + +I+ GIPL RLG AQD+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

45) Hsero_1109 in NC_014323


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  271 bits (1013),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 162/249 (66%), Positives = 210/249 (85%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAVITGGAGINGLGYATARLMAEQGARVVVLDLaqadpaaaaaRIGSQHLGLVA  60
            MLL++K+A+ITG+A+  G+G ATA   A++GARVV+LDL ++ +  AAA +G  HLGL A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKASCETAAAAILQQFGRIDILVNNAGITQPVKTLEITGADYDRILDVSLRGTLYMS  120
            +V+D +    A A+I+++FGRID+LVNNAGITQP+KTL+I  +DYD++LDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMRAQQNGSIICISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREFGPEGIRV  180
            QAV+P+MRAQ +GSI+C+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMAREFGP+ IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIGTDIIKGKLTEEKKAEIAETIPLARLGRADDIGGACVFLGSDLSQYCTGITL  240
            NSI+PGLI TDI  G + +E++  I E IPL+RLG A+D++ A +FL+SDLS Y TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

46) A225_1839 in NC_018106


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  269 bits (1007),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 179/249 (72%), Positives = 218/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGASVVIIDlngeaskaaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMEIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K ++I+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPAMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIP+MRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAVDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

47) KOX_15055 in NC_016612


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  269 bits (1007),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 179/249 (72%), Positives = 218/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASARGLGFATAKLFAENGASVVIIDlngeaskaaaaalgeghlglaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA VVI+DL+  A++ AAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMEIKRANYDAVLDVSLRGTLLMS  120
            NVADE QV+ A+  I+  +GR+DVLVNNAGITQP+K ++I+ ++YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPAMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV  180
            QAVIP+MRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAVDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + D+    I+ GIP+ RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

48) mll5766 in NC_002678


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  268 bits (1002),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 174/249 (70%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKGKAVVISGAASPRGIGRSTATLMAEQGARIAILDLDEEQARDAAASLGPEHIGLAC  60
            MLL+GK  +I+GAAS RGIGR+TA   A++GAR+ ILDLDE  ARDAAA+LG  H+GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADLDSCKRAAAEVTEAFGRVEVLCNIAGITQPVKTLDIGPADWDRILDVNLRGVLYLS  120
            NVAD    K+A A + E FGR++VL N AGITQP+KTLDI P+D D++LDV+LRG L +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAFIPHMRENGGGSIICMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPDGIRI  180
            QA IP MR +G+GSI+CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGPD IRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIQTDITGGKLTDAMRADIIKGIPLSRLGDARDVAGAYLFLASDLASYITGAVI  240
            N ++PGLI+TDITGG + D  R  II GIPL+RLG A+DVA A LFLASDL+SY+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

49) AZKH_p0610 in NC_020548


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  268 bits (1001),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 163/249 (66%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  5    LLLDGKVAIITGGAGLNGLGFATAKMLAAQGARVAILDLEQANPAGAAAELGPQHIGLVA  64
            +LL+GK+AIITG+A+  G+G ATA  +A +GARV ILDL+++ + +AAA LG  H+GL A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  65   NVTDKASCEAAAAEVVKQLGSIDVLVNNAGITQPRKMLDITGADYDAVLDVSLRGTLYMS  124
            NV+D +    A A ++ ++G IDVLVNNAGITQP K LDI  +DYD VLDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  125  QAVVPTMQQQKSGSIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREYGADNIRV  184
            QAV+PTM+ Q SGSIVC+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMARE+G+D+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  185  NCITPGLIATDINKGKIPEDRRAAILESIPLGHIGEPNDVAGCVVFLASPLSKYCTGITL  244
            N I+PGLI TDI  G + ++RR AI+E+IPLG++G ++DVA   +FLAS LS Y TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  245  DVNGGMLIH  253
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

50) Dda3937_00379 in NC_014500


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  267 bits (998),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 183/249 (74%), Positives = 218/249 (88%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGAASPRGLGFATAKLFAENGAKVVILDLDAQASKNAADILGAPHLGvaa  60
            MLL++K+AIITGAAS RG+G ATA  FA++GA+VVILDLD  A+++AA  LG  HLG+AA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   nvaneqqvnaaIEQVLGKYGRIDILVNNAGITQPIKTMDIKRENYDAVLDVSLRGTLLMS  120
            NVA+E QV+ A+  ++  +GRID+LVNNAGITQPIKT+DI+  +YD VLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAVIPTMRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIQTDITAGKLSDEMKHNILAGIPLNRLGDAIDIARAALFLGSDLSSYSTGITL  240
            N I+PGLI+TDIT+G + DE +H I+ GIPL RLG A D+A AALFL+SDLSSY TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

51) Daci_0732 in NC_010002


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  266 bits (996),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 164/249 (66%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDRVAIITGGAGINGLGFATARQMAAQGARVAILDLERADPAGAAARLGDGHLGLVA  60
            MLL++++AIITG+A+  G+G ATA   A +GARV ILDL+ + + +AAA LG+GHLGL A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKPSCEaaaaaVLRAFGRIDALVNNAGITQAVGTLEIGGADYDRVLDVSLRGTLYMS  120
            +V+D +    A A+++  FGRID LVNNAGITQ++ TL+I  +DYD+VLDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPSMRRQQAGAIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMAREFGGDGIRI  180
            QAV+P+MR Q +G+IVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMAREFG D IRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIETDITQGKLGPERKREISATIPLARLGRADDVAGACVFLASDLAGYCTGITL  240
            N ++PGLI+TDIT G +  ER++ I   IPL+RLG A+DVA A +FLASDL++Y TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

52) DelCs14_5805 in NC_015563


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 164/249 (66%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDRVAIITGGAGINGLGFATARQMAAQGARVAILDLERADPAGAAARLGDGHLGLVA  60
            MLL++++AIITG+A+  G+G ATA   A +GARV ILDL+ + + +AAA LG+GHLGL A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKPSCEaaaaaVLRAFGRIDALVNNAGITQAVGTLEIGGADYDRVLDVSLRGTLYMS  120
            +V+D +    A A+++  FGRID LVNNAGITQ++ TL+I  +DYD+VLDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMRRQQAGAIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMAREFGGDGIRI  180
            QAV+P+MR Q +G+IVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMAREFG D IRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIETDITQGKLGPERKREISATIPLARLGRADDVAGACVFLASDLAGYCTGITL  240
            N ++PGLI+TDIT G +  ER++ I   IPL+RLG A+DVA A +FLASDL++Y TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

53) Vapar_3308 in NC_012791


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  261 bits (976),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 167/249 (68%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDKIVVITGGAGVNGLGFATARLMAAHGARVAVLDLERaapaaaaaQLGPAHLGIVA  60
            MLL++KI +ITG+A+  G+G ATA   A HGARV +LDL+ +A+  AAA LG +HLG+ A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKASCDAAAATVLKAFGRIDTLVNNAGITQPVKTLEISGADYDRILDVSLRGTLYMS  120
            +V+D +    A AT++  FGRID LVNNAGITQP+KTL+I  +DYD++LDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPSMqqqgggSIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREFGPEGIRI  180
            QAV+P+M+ QG+GSIVC+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMAREFGP+ IRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIGTDIIKGRLTEEKKAEIAETIPLGRLGRANDIAGACVFLASDLSLYCTGITL  240
            NSI+PGLI TDI  G + +E++  I E IPLGRLG A+D+A A +FLASDLS Y TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

54) Mpop_0259 in NC_010725


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  260 bits (971),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 167/249 (68%), Positives = 211/249 (85%), Gaps = 0/249 (0%)

Query  1    MLLKDRVCVITGAASARGIGRATAHAFAAQGGRVVVLDLDAGQAEAAARDIGPAHFGFAC  60
            MLL++++ +ITGAAS RGIGRATA +FA +G+RVV+LDLD + A  AA  +G +H+G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKAACRAAAEEVVGQAGRIDVLVNNAGITQPLKLMEIDAAHYEAVTDVNLRGTLYMS  120
            +V+D +  + A   ++ + GRIDVLVNNAGITQP+K ++I +++Y+ V DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVVPTMRAQRAGSIVCLSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGSDGIRV  180
            QAV+PTMRAQ +GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+G+D IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITGGKLTEELRAEIIKGIPLGRLGVADDVANACLFLASDLSAYLTGTVI  240
            NS++PGLI+TDITGG + +E R  II GIPLGRLG A+DVANA LFLASDLS+YLTG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

55) NH8B_2713 in NC_016002


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  260 bits (971),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 169/249 (68%), Positives = 208/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLENKVVIVTGAASPRGIGKATARVLAANGARVVILDLREEDAVAAARDLGEGHLGLAC  60
            MLL+ K+ I+TGAAS RGIG+ATA  +A +GARVVILDL E  A  AA  LGEGHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVTRKEDCLVAVAAVLQKYGRVDGLINNAGITQPLRVMDIAAENFDAVVDVNLRGSLYMS  120
            NV+   +   AVA++++ +GR+D L+NNAGITQP++ +DI + ++D V+DV+LRG+L MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPHMKKQssgsivcmssvsAQRGGGIFGGPHYSAAKAGVLGLARAMARELGGDNVRV  180
            QAVIP M+ Q+SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+G D++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPEMRAEIIKGIPLNRLGNAEDVANACLYLISDLSSYLTGVTL  240
            NSI+PGLI+TDITG+ +  E R  II GIPL RLG A+DVANA L+L SDLSSYLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

56) Mrad2831_3001 in NC_010505


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  260 bits (970),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 169/249 (68%), Positives = 207/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLNDRVCVITGAASARGIGKATARLFARHGARVAVLDLDVGQAEAAARDIGPGHVGLAC  60
            MLL++++ +ITGAAS RGIG+ATA  FA+HGARV +LDLD + A  AA  +G GH+GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDRAACSAAADEIVGRLGRIDVLVNNAGITQPLRIMEIEPEDYDAVTDVNLRGTLYMS  120
            +V+D +    A   I+ ++GRIDVLVNNAGITQP++ ++I P DYD V DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPTMRGRGSGAIVCMSSVSAQRGGGIFGGPHYSaakggvlglakamaRELGPDGVRV  180
            QAVIPTMR++GSG+IVCMSSVSAQRGGGIFGGPHYSAAK+GVLGL+KAMARE+GPD +R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITGGKLTPELTAEIASGIPLGRLGVADDVANACLFLASDLSTYITGAVI  240
            NS++PGLI+TDITGG +  E    I  GIPLGRLG A+DVANA LFLASDLS+Y+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

57) Bpro_1454 in NC_007948


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  258 bits (965),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 158/249 (64%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDRVAVVTGGAGPNGLGFATARMMAAQGATIIILDLSQADPaaaaaRLGPQHMGLVA  60
            MLL++++A++TG+A+  G+G ATA   A +GA ++ILDL ++ +  AAA LG  H+GL A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTNKASCDTAVAAVLDAKGRIDILVNNAGITQPRKTLDISPEDYDAVLDVSLRGTLVAS  120
            +V++ +    AVA++++  GRID+LVNNAGITQP KTLDI P DYD VLDVSLRGTL+ S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPTMLAQKQGSIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREYGGQGIRV  180
            QAV+PTM AQ  GSIVC+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMARE+G + IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIATDINKGKIPDDKRQAILDGIPLGYIGAPDDVAGCVVFLASDLSGYCTGITL  240
            N ++PGLI TDI  G + D++R+AI++GIPLG +GA++DVA   +FLASDLS+Y TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

58) MexAM1_META1p2077 in NC_012808


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  257 bits (961),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 166/249 (67%), Positives = 208/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLKDKVCVITGAASARGIGKATARLFAAQGGRVVILDLDAGQAEAAAREIGQGHFGLAC  60
            MLL++K+ +ITGAAS RGIG+ATA  FA +G+RVVILDLD + A  AA  +G+GH+GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVANRTACQAAADEVIAQAGQIDVLVNNAGISQPLKLMEIEAANYDAVTDVNLRGTLYMS  120
            +VA+ +  + A   +I + G+IDVLVNNAGI+QP+K ++I +++YD V DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPAMRRQRTGAIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGSDGIRV  180
            QAVIP+MR Q +G+IVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+G+D IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITAGKLTDAMRAEIVSGIPLGRLGVADDVANVCLFLASDLSAYLTGAVI  240
            NS++PGLI+TDIT+G + D  R  I+ GIPLGRLG A+DVAN  LFLASDLS+YLTG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

59) PT7_3271 in NC_015458


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  257 bits (959),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 171/248 (69%), Positives = 207/248 (84%), Gaps = 0/248 (0%)

Query  4    LLSNKVAIITGAASLNGIGRRTAKLFAEHGATVVIVDldataasaaaeslgsghlglagN  63
            LL  K+AIITGAAS  GIGR TA  FA+HGA VVI+DLD +AA  AA +LG GHLGLA+N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  64   VANRDDCQKVVDTVLQSYGKVDVLVNNAGITQPSKIMEITGEDYQRITDVSLRGTLYMSQ  123
            VA+  + ++ V T+++ +G++DVLVNNAGITQP K ++I   DY+++ DVSLRGTL MSQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVIPCMRQAGTGSIVCLSSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDGIRVN  183
            AVIP MR  G+GSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL++AMARE+GPD IR+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  184  SLTPGLIQTDITAGKLSPEMKAEILKGIPLNRLGAAVDVANCCLFLASDLSGYLTGVTLD  243
            S++PGLI+TDIT+G +  E +  I+ GIPL RLGAA DVAN  LFLASDLS+YLTG+TLD
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  244  VNGGMLIH  251
            VNGGMLIH
Sbjct  285  VNGGMLIH  292

60) Mext_2090 in NC_010172


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  256 bits (958),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 165/249 (67%), Positives = 207/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLKDKVCVITGAASARGIGKATARLFAAQGGRVVILDLDAGQAEAAAREIGPGHFGLAC  60
            MLL++K+ +ITGAAS RGIG+ATA  FA +G+RVVILDLD + A  AA  +G GH+GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVANRTACQAAADEVIAQAGRIDVLVNNAGISQPLKLMEIEAANYDAVTDVNLRGTLYMS  120
            +VA+ +  + A   +I + GRIDVLVNNAGI+QP+K ++I +++YD V DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVVPAMRRQRTGAIVCMSSVSAQRGGGIFGSPHYSaakagvlglakamaRELGSDGIRV  180
            QAV+P+MR Q +G+IVCMSSVSAQRGGGIFG+PHYSAAKAGVLGL+KAMARE+G+D IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITAGKLTDAMRAEIVSGIPLGRLGVADDVANVCLFLASDLSAYLTGAVI  240
            NS++PGLI+TDIT+G + D  R  I+ GIPLGRLG A+DVAN  LFLASDLS+YLTG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

61) Mchl_2365 in NC_011757


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  256 bits (955),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 166/249 (67%), Positives = 207/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLKDKVCVITGAASARGIGKATARLFAAQGGRVVILDLDAGQAEAAAREIGPGHFGLAC  60
            MLL++K+ +ITGAAS RGIG+ATA  FA +G+RVVILDLD + A  AA  +G GH+GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVANRTACQAAADEVIAQAGQIDVLVNNAGISQPLKLMEIEAANYDAVTDVNLRGTLYMS  120
            +VA+ +  + A   +I + G+IDVLVNNAGI+QP+K ++I +++YD V DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPAMRRQRAGAIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGSDGIRV  180
            QAVIP+MR Q +G+IVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+G+D IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITAGKLTDAMRAEIVSGIPLGRLGVADDVANVCLFLASDLSAYLTGAVI  240
            NS++PGLI+TDIT+G + D  R  I+ GIPLGRLG A+DVAN  LFLASDLS+YLTG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

62) fabG in NC_014323


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  255 bits (951),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 158/249 (64%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAIITGGAGQNGLGFSTARLMAAQGARIVILDleraepagaaarlgaQHLGLVA  60
            MLL++K+AIITG+A++ G+G +TA   A +GAR+VILDL+ + + +AAA LG  HLGL A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKaaceaaaaaVLKQFGRIDILVNNAGVTQPAKLLEITGKDYDRILDVSLRGTLYMS  120
            +V+D +    A A+++ +FGRID+LVNNAG+TQP K L+I   DYD++LDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMQAQQSGSIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREFGPQGIRV  180
            QAV+P+M+AQ SGSIVC+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMAREFGP+ IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLISTDINKDILSAEKKAEIAQTIPLGRLGGPDDVGGVCVFLASDLSQYCTGVTL  240
            N I+PGLI TDI  +++  E++  I + IPLGRLG+++DV+   +FLASDLS Y TG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

63) YSA_04978 in NC_017986


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  254 bits (948),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 221/249 (89%), Positives = 240/249 (97%), Gaps = 0/249 (0%)

Query  1    MLLQGKVaiitgaasargigrataatfaaqgarVVIldldeaaardaaaslGEGHLGLaa  60
            MLLQGK+AIITGAAS RGIGRATA TFA +GARVVILDLDE+AARDAAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   nvadqaqvnqavaqIIEHFGRIDVLVNNAGITQPLKTLDIKHSDYDKVLDVSLRGTLLMS  120
            NVAD++QV+QAVA IIEHFGRIDVLVNNAGITQP+KTLDI+ +DYDKVLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPLMREQRSGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAVIP MR Q SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NAIAPGLIHTDITGGLMQDDRRHAIIDGIPLGRLGEAQDVANAALFLASDLSTYLTGITL  240
            N+IAPGLIHTDITGGLMQD+RRHAII+GIPLGRLG AQDVANAALFLASDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

64) METDI2857 in NC_012988


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  254 bits (947),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 165/249 (67%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDKVCVITGAASARGIGKATARLFAAQGGRVVILDLDAGQAEAAAREIGPGHFGLAC  60
            MLL++K+ +ITGAAS RGIG+ATA  FA +G+RVVILDLD + A  AA  +G GH+GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVANRAACQAAADEVIAQAGQIDVLVNNAGISQPLKLMEIEAANYDAVTDVNLRGTLYMS  120
            +VA+ +  + A   +I + G+IDVLVNNAGI+QP+K ++I +++YD V DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPAMRRQRTGAIVCMSSVSAQRGGGIFGVPHYSaakagvlglakamaRELGSDGIRV  180
            QAVIP+MR Q +G+IVCMSSVSAQRGGGIFG PHYSAAKAGVLGL+KAMARE+G+D IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITAGKLTDAMRAEIVSGIPLGRLGVADDVANVCLFLASDLSAYLTGAVI  240
            NS++PGLI+TDIT+G + D  R  I+ GIPLGRLG A+DVAN  LFLASDLS+YLTG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

65) PPUBIRD1_0040 in NC_017530


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  253 bits (945),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 220/249 (89%), Positives = 240/249 (97%), Gaps = 0/249 (0%)

Query  1    MLLQGKVaiitgaasargigrataatfaaqgarVVIldldeaaardaaaslGEGHLGLaa  60
            MLLQGK+AIITGAAS RGIGRATA TFA +GARVVILDLDE+AARDAAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   nvadqaqvnqavaqIIEHYGRIDVLVNNAGITQPLKTLDIKHSDYDKVLDVSLRGTLLMS  120
            NVAD++QV+QAVA IIEH+GRIDVLVNNAGITQP+KTLDI+ +DYDKVLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPLMREQRSGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAVIP MR Q SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NAIAPGLIHTDITGGLMQDDRRHAIIDGIPLGRLGEAQDVANAALFLASDLSTYLTGITL  240
            N+IAPGLIHTDITGGLMQD+RRHAII+GIPLGRLG AQDVANAALFLASDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

66) BC1001_5112 in NC_015137


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  252 bits (941),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 175/249 (71%), Positives = 211/249 (85%), Gaps = 0/249 (0%)

Query  1    MLLENKVVIVTGAASPRGIgkatakalaaqgaHVVILDLREEdakaaaadlgaghlglac  60
            MLL+ K+ I+TGAAS RGIG+ATA ++A +GA+VVILDL E  A+ AAA LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   dVTDkaacvkaakaaLERYGRIDGLVNNAGITQPVRTLDISAEGFDAIVDVNLRGTLYMS  120
            +V+D +   +A  + +E++GRID LVNNAGITQP++TLDI + ++D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMKEQKSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLARAMAREFGPDSIRV  180
            QAV+P+M+ Q SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL++AMAREFGPD IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPEMRTDIIKGIPLGRLGDAADVANACLFLVSDLSTYLTGITL  240
            NSI+PGLI+TDITG+ +  E R  II GIPLGRLG A DVANA LFL SDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

67) BUPH_05966 in NC_018672


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  252 bits (942),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 175/250 (70%), Positives = 212/250 (85%), Gaps = 0/250 (0%)

Query  1    MMLLENKVVIVTGAASPRGIgkatakalaaqgaHVVILDLREEdakaaaadlgaghlgla  60
            +MLL+ K+ I+TGAAS RGIG+ATA ++A +GA+VVILDL E  A+ AAA LG GHLGLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  61   cdVTDkaacvkaakaaLERYGRIDGLVNNAGITQPVRTLDISAEGFDAIVDVNLRGTLHM  120
             +V+D +   +A  + +E++GRID LVNNAGITQP++TLDI + ++D ++DV+LRGTL M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  121  SQAVLPAMKEQKSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLARAMAREFGPDSIR  180
            SQAV+P+M+ Q SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL++AMAREFGPD IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  181  VNSITPGLIQTDITGDKLTPEMRTDIIKGIPLGRLGDAADVANACLFLVSDLSTYLTGIT  240
            +NSI+PGLI+TDITG+ +  E R  II GIPLGRLG A DVANA LFL SDLS+YLTGIT
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  241  LDVNGGMLIH  250
            LDVNGGMLIH
Sbjct  283  LDVNGGMLIH  292

68) Pput_5278 in NC_009512


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  252 bits (942),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 221/249 (89%), Positives = 239/249 (96%), Gaps = 0/249 (0%)

Query  1    MLLQGKVaiitgaasargigrataatfaaqgarVVIldldeaaardaaaslGEGHLGLaa  60
            MLLQGK+AIITGAAS RGIGRATA TFA +GARVVILDLDE+AARDAAA+LGEGHLGLAA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   nvadqaqvnqavaqIIEHFGRIDVLVNNAGITQPLKTLDITHSDYDKVLDVSLRGTLLMS  120
            NVAD++QV+QAVA IIEHFGRIDVLVNNAGITQP+KTLDI  +DYDKVLDVSLRGTLLMS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPLMREQRSGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAVIP MR Q SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NAIAPGLIHTDITGGLMQDDRRHAIIDGIPLGRLGEAQDVANAALFLASDLSTYLTGITL  240
            N+IAPGLIHTDITGGLMQD+RRHAII+GIPLGRLG AQDVANAALFLASDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

69) BYI23_D007430 in NC_016626


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  252 bits (942),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 170/249 (69%), Positives = 209/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLENQVVIVTGAASARGIgkatakalaaqgaRIVVLDLKEADAQAAANDLGEGHLGLAC  60
            MLL+ ++ I+TGAAS RGIG+ATA ++A +GAR+V+LDL E+ A+ AA  LGEGHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKAACVAAAHATIEQYGRIDALINNAGITQPIKTLEISADNFDAVIGVNLLGTLYMS  120
            +V+D +    A  + IE++GRID L+NNAGITQPIKTL+I ++++D V++V+L GTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPQMKKQQRGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGGDGIRV  180
            QAVIP M+ Q  GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG D IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPEMRADIIKGIPLARLGDAADIANACLFLSSELSSYLTGVTL  240
            NSI+PGLI+TDITG+ +  E R  II GIPL+RLG A D+ANA LFL+S+LSSYLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

70) BC1003_4375 in NC_014540


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  251 bits (937),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 172/249 (70%), Positives = 212/249 (86%), Gaps = 0/249 (0%)

Query  1    MLLENKVVIVTGAASPRgigkatakalaaqgakVVILDLREEdakaaaadlgaghlglac  60
            MLL+ K+ I+TGAAS RGIG+ATA ++A +GA+VVILDL E  A+ AAA LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   dVTDKAACLKAASATLERYGRIDGLINNAGITQPVRTLDISAEGFDAIVDVNLRGTLYMS  120
            +V+D +   +A ++ +E++GRID L+NNAGITQP++TLDI + ++D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMKEQKSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLARAMAREFGPDSVRV  180
            QAV+P+M+ Q SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL++AMAREFGPD +R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPDMRADIIKGIPLGRLGDAADVANACLFLVSDLSTYLTGITL  240
            NSI+PGLI+TDITG+ +  + R  II GIPLGRLG A DVANA LFL SDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

71) BC1002_6122 in NC_014119


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  250 bits (935),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 172/249 (70%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLENRTIIVTGAASPRGIGKataralaaqgaRVVILDLRREDAQSAAADLGAKHLGLAC  60
            MLL+ +  I+TGAAS RGIG+ATA ++A +GARVVILDL    A+ AAA LG  HLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKDACIAAARETLQRFGRIDGLVNNAGITQPVRTLEIGGKDFDAIVDVNLRGTLYMS  120
            +V+D      A    +++FGRID LVNNAGITQP++TL+I   D+D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMKEQNGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGANHIRV  180
            QAV+P+M+ Q +GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+++IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIHTDITGDKLTPAMRDDIIKGIPLGRLGDAADVANACLFLLSDLSSYLTGITL  240
            NSI+PGLIHTDITG+ +    R+ II GIPLGRLG A DVANA LFL SDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

72) Lcho_0404 in NC_010524


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  247 bits (922),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 158/249 (64%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDKVALITGGAGPNGLGFATARMMAEQGARIVILdlaqadpagaaarlgpQHIGVVA  60
            MLL++K+A+ITG+A+  G+G ATA   A++GAR+VILDL ++ + +AAA LG  H+G+ A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKASCELAARTVLETCGRIDVLVNNAGITQPRKTVDITGADYDAVLDVSLRGTLYMS  120
            +V+D +    A  T++E  GRIDVLVNNAGITQP KT+DI  +DYD VLDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMRAQKGGAIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREYGNDNVRI  180
            QAV+P+MRAQ +G+IVC+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMARE+G D++RI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIATDINKGLIPADRMVGILEQIPLNRIGGPDDVAGCVVFLASDLARYCTGVTL  240
            N ++PGLI TDI  GL+  +R  +I+E IPL R+G+++DVA   +FLASDL+ Y TG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

73) BRPE64_DCDS04570 in NC_021289


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  246 bits (920),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 172/249 (70%), Positives = 213/249 (86%), Gaps = 0/249 (0%)

Query  1    MLLDKQVVIVTGAASARGIgkatakalaaqgaRIVVLDLKEADAQAAANDLGEGHLGLac  60
            MLL+ ++ I+TGAAS RGIG+ATA ++A +GAR+V+LDL E+ A+ AA  LGEGHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   dvtdqaacvaaaqatIEKYGRIDVLINNAGITQPIKTLEISAANFDAVIGVNLRGTLYMS  120
            +V+D++    A  + IE +GRIDVL+NNAGITQPIKTL+I ++++D V++V+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPQMKKQQRGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaRELGADHIRV  180
            QAVIP M+ Q  GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+G+D+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPDMRTDIIKGIPLGRLGDAADIANACLFLASDMSSYLTGVTL  240
            NSI+PGLI+TDITG+ +  + R  II GIPLGRLG A D+ANA LFLASD+SSYLTG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

74) BRPE64_CCDS04470 in NC_021288


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  245 bits (913),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 163/248 (66%), Positives = 205/248 (83%), Gaps = 0/248 (0%)

Query  6    LLEGKVAVISGAASPRGIGMATARMFAKHGAKVAIFDLDEAAAREAASTIGPEHRGYACN  65
            LL+GK+A+I+GAAS RGIG ATA  FA+HGA+V I+DLDE+AAR+AA+T+G  H G A N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  66   VTDRAACDKAVEQVIADFGVIDVLINNAGITQAVKLLDIDAQSWDRVLDVNLRGVLYLSQ  125
            V+D +   +AV  +I +FG IDVL+NNAGITQ++K LDI +   D+VLDV+LRG L +SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  126  AVVPQMKRQGSGSIGCMSSVSAQRGGGILGGPHYSaakagvlglakamaRELGNDGIRVN  185
            AV+P M+ QGSGSI CMSSVSAQRGGGI+GGPHYSAAKAGVLGL+KAMARE+G D IR+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  186  CVTPGLIQTDINAGKISDEKRVEILAGIPLNRLGGPDDVAGAFLFLASPISSYITGAVID  245
             ++PGLI+TDI +G + DE+R  I+ GIPL RLG+++DVA A LFLAS +SSY+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  246  VNGGMLIH  253
            VNGGMLIH
Sbjct  285  VNGGMLIH  292

75) Acry_0716 in NC_009484


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  245 bits (913),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 158/249 (64%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKGKTAVISGGASKKGIGLATARLFAEHGARVAILDLDQEASDEAAASLGAGHLGVAC  60
            MLL+GK A+I+G+AS +GIG ATA  FA+HGARV ILDLD+ A+ +AAA+LG GHLG+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDRAACDEAARRVIGAFGQADILINNAGITEPLRLLEIEARNWERVIDVNLTGVFHLS  120
            +V+D +   +A   +I  FG+ D+L+NNAGIT+P++ L+I + + ++V+DV+L G + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAFLPHMSARGSGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPAGIRV  180
            QA +P M A+GSGSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGP  IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTEITGGKLTDEMRAEILKGIPIGRLGTAEDVARIFLFLASDLSAYVTGAVI  240
            NS++PGLI+T+ITGG + DE R  I+ GIP+GRLG+A+DVA   LFLASDLS+Y+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

76) ACMV_11560 in NC_015186


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  245 bits (913),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 158/249 (64%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKGKTAVISGGASKKGIGLATARLFAEHGARVAILDLDQEASDEAAASLGAGHLGVAC  60
            MLL+GK A+I+G+AS +GIG ATA  FA+HGARV ILDLD+ A+ +AAA+LG GHLG+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDRAACDEAARRVIGAFGQADILINNAGITEPLRLLEIEARNWERVIDVNLTGVFHLS  120
            +V+D +   +A   +I  FG+ D+L+NNAGIT+P++ L+I + + ++V+DV+L G + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAFLPHMSARGSGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPAGIRV  180
            QA +P M A+GSGSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGP  IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTEITGGKLTDEMRAEILKGIPIGRLGTAEDVARIFLFLASDLSAYVTGAVI  240
            NS++PGLI+T+ITGG + DE R  I+ GIP+GRLG+A+DVA   LFLASDLS+Y+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

77) BRADO4765 in NC_009445


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (907),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 166/249 (67%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLSGKTAIISGAASKRGIGLATARRFAAEGAKVAILDIDaaaaaeaaaSLGDGHIGLGC  60
            MLL GK AII+GAAS RGIG ATA  FA +GA+V ILD+D +AA +AAA+LG+GH+GL+ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADKTSCNDAVAQAIRQFGVIDILINNAGITQPVKLLDIKEEDWERIQNVNLKGVLFLS  120
            NVAD +  ++AVA  I +FG ID+L+NNAGITQP+K LDI+  D +++ +V+L+G L++S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPHMRARKSGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGIDGIRV  180
            QAVIP MRA+ SGSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG D IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIGTDITAGKLTDEMKAKILEGIPLNRLGTAEDVAGIYTFLASDLSAYVTGAVI  240
            N ++PGLI TDIT+G + DE +  I+EGIPL RLG+A+DVA    FLASDLS+Y+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

78) SMc00268 in NC_003047


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (907),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 161/248 (65%), Positives = 206/248 (84%), Gaps = 0/248 (0%)

Query  5    LLEGNFAVITGAASRRGLGKATARLFAEHGATVaildldeadareaaaSLGPRHVGMACN  64
            LL+G++A+ITGAAS RG+G+ATA  FA+HGA V ILDLDE+ AR+AAA+LG  H+G+A N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  65   VTDLASVRTVMDALVSQWGRIDILVNNAGITQPLKIMEIAPENYDAVLDVNLRGTLYCSQ  124
            V+D + V+  + +++ + GRID+LVNNAGITQP+K ++I P +YD VLDV+LRGTL  SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  125  AVIPHMRSRKQGKIVNLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMARELAPDNVRVN  184
            AVIP MR++  G IV +SSVSAQRGGGIFGGPHYSAAKAGVLGL KAMARE++PD++R+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  185  AICPGFIATDITGGLLTPEKLEEIKAGIPMGRPGTADDVAGCALFLASDLSAYVTGSEVD  244
            +I PG+I TDITGGL+  E+ + I  GIP+GR G+A+DVA  ALFLASDLS+Y+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  245  VNGGSLIH  252
            VNGG LIH
Sbjct  285  VNGGMLIH  292

79) Sinme_1602 in NC_015590


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (907),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 161/248 (65%), Positives = 206/248 (84%), Gaps = 0/248 (0%)

Query  5    LLEGNFAVITGAASRRGLGKATARLFAEHGATVaildldeadareaaaSLGPRHVGMACN  64
            LL+G++A+ITGAAS RG+G+ATA  FA+HGA V ILDLDE+ AR+AAA+LG  H+G+A N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  65   VTDLASVRTVMDALVSQWGRIDILVNNAGITQPLKIMEIAPENYDAVLDVNLRGTLYCSQ  124
            V+D + V+  + +++ + GRID+LVNNAGITQP+K ++I P +YD VLDV+LRGTL  SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  125  AVIPHMRSRKQGKIVNLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMARELAPDNVRVN  184
            AVIP MR++  G IV +SSVSAQRGGGIFGGPHYSAAKAGVLGL KAMARE++PD++R+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  185  AICPGFIATDITGGLLTPEKLEEIKAGIPMGRPGTADDVAGCALFLASDLSAYVTGSEVD  244
            +I PG+I TDITGGL+  E+ + I  GIP+GR G+A+DVA  ALFLASDLS+Y+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  245  VNGGSLIH  252
            VNGG LIH
Sbjct  285  VNGGMLIH  292

80) SinmeB_1445 in NC_017322


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (907),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 161/248 (65%), Positives = 206/248 (84%), Gaps = 0/248 (0%)

Query  5    LLEGNFAVITGAASRRGLGKATARLFAEHGATVaildldeadareaaaSLGPRHVGMACN  64
            LL+G++A+ITGAAS RG+G+ATA  FA+HGA V ILDLDE+ AR+AAA+LG  H+G+A N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  65   VTDLASVRTVMDALVSQWGRIDILVNNAGITQPLKIMEIAPENYDAVLDVNLRGTLYCSQ  124
            V+D + V+  + +++ + GRID+LVNNAGITQP+K ++I P +YD VLDV+LRGTL  SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  125  AVIPHMRSRKQGKIVNLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMARELAPDNVRVN  184
            AVIP MR++  G IV +SSVSAQRGGGIFGGPHYSAAKAGVLGL KAMARE++PD++R+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  185  AICPGFIATDITGGLLTPEKLEEIKAGIPMGRPGTADDVAGCALFLASDLSAYVTGSEVD  244
            +I PG+I TDITGGL+  E+ + I  GIP+GR G+A+DVA  ALFLASDLS+Y+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  245  VNGGSLIH  252
            VNGG LIH
Sbjct  285  VNGGMLIH  292

81) C770_GR4Chr1738 in NC_019845


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (907),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 161/248 (65%), Positives = 206/248 (84%), Gaps = 0/248 (0%)

Query  5    LLEGNFAVITGAASRRGLGKATARLFAEHGATVaildldeadareaaaSLGPRHVGMACN  64
            LL+G++A+ITGAAS RG+G+ATA  FA+HGA V ILDLDE+ AR+AAA+LG  H+G+A N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  65   VTDLASVRTVMDALVSQWGRIDILVNNAGITQPLKIMEIAPENYDAVLDVNLRGTLYCSQ  124
            V+D + V+  + +++ + GRID+LVNNAGITQP+K ++I P +YD VLDV+LRGTL  SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  125  AVIPHMRSRKQGKIVNLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMARELAPDNVRVN  184
            AVIP MR++  G IV +SSVSAQRGGGIFGGPHYSAAKAGVLGL KAMARE++PD++R+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  185  AICPGFIATDITGGLLTPEKLEEIKAGIPMGRPGTADDVAGCALFLASDLSAYVTGSEVD  244
            +I PG+I TDITGGL+  E+ + I  GIP+GR G+A+DVA  ALFLASDLS+Y+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  245  VNGGSLIH  252
            VNGG LIH
Sbjct  285  VNGGMLIH  292

82) SM11_chr1709 in NC_017325


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (907),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 161/248 (65%), Positives = 206/248 (84%), Gaps = 0/248 (0%)

Query  5    LLEGNFAVITGAASRRGLGKATARLFAEHGATVaildldeadareaaaSLGPRHVGMACN  64
            LL+G++A+ITGAAS RG+G+ATA  FA+HGA V ILDLDE+ AR+AAA+LG  H+G+A N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  65   VTDLASVRTVMDALVSQWGRIDILVNNAGITQPLKIMEIAPENYDAVLDVNLRGTLYCSQ  124
            V+D + V+  + +++ + GRID+LVNNAGITQP+K ++I P +YD VLDV+LRGTL  SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  125  AVIPHMRSRKQGKIVNLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMARELAPDNVRVN  184
            AVIP MR++  G IV +SSVSAQRGGGIFGGPHYSAAKAGVLGL KAMARE++PD++R+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  185  AICPGFIATDITGGLLTPEKLEEIKAGIPMGRPGTADDVAGCALFLASDLSAYVTGSEVD  244
            +I PG+I TDITGGL+  E+ + I  GIP+GR G+A+DVA  ALFLASDLS+Y+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  245  VNGGSLIH  252
            VNGG LIH
Sbjct  285  VNGGMLIH  292

83) Alide2_2567 in NC_015422


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (906),  Expect = 6e-66, Method: Compositional matrix adjust.
 Identities = 154/249 (62%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAVITGGAGINGLGFATARMMGEQGARVaildlaaadpqaaaaRLGEGHMGVVA  60
            MLL++K+A+ITG+A+  G+G ATA   +++GARV ILDL  + ++ AAA LGEGH+G+ A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVTDKasceaaaaavqaRYGRIDILVNNAGVTQPAKFLDITGADYDRILDVSLRGTLYAS  120
            NV+D +    A A++  ++GRID+LVNNAG+TQP K LDI  +DYD++LDVSLRGTL  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMLAQQSGAIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREYGGSNIRV  180
            QAV+P+M AQ SG+IVC+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMARE+G  +IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIATDINKGKIPDDKRQGILDGIPLARIGEPADVAGCVVFLASDLAKYCTGVTL  240
            N ++PGLI TDI  G + D++R++I++GIPL+R+G + DVA   +FLASDL+ Y TG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

84) fabG in NC_016595


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (906),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 174/249 (70%), Positives = 210/249 (85%), Gaps = 0/249 (0%)

Query  1    MLLSNKVCVITGAASQRGIGRATARLFALHGGRAIIldldggqaaeaaaelgeaHRGIAC  60
            MLL  K+ +ITGAAS+RGIGRATA  FA HG+R +ILDLD + A +AAA LGE+H G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKAACVNAAARVVEEFGRIDVLVNNAGITQPLKFMDIEPKNYEAVTDVSLRGTLYMS  120
            +V+D +   +A A ++E+FGRIDVLVNNAGITQP+K +DI P +Y+ V DVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVVPHMRAQKSGSIVCISSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAV+P MRAQ SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITGGKLTPELRADILKGIPLNRLGDAEDVARSCLFLASELSSYVTGATL  240
            NS++PGLI+TDITGG +  E R  I+ GIPL RLG A+DVA + LFLAS+LSSY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

85) SM2011_c00268 in NC_020528


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  243 bits (907),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 161/248 (65%), Positives = 206/248 (84%), Gaps = 0/248 (0%)

Query  31   LLEGNFAVITGAASRRGLGKATARLFAEHGATVaildldeadareaaaSLGPRHVGMACN  90
            LL+G++A+ITGAAS RG+G+ATA  FA+HGA V ILDLDE+ AR+AAA+LG  H+G+A N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  91   VTDLASVRTVMDALVSQWGRIDILVNNAGITQPLKIMEIAPENYDAVLDVNLRGTLYCSQ  150
            V+D + V+  + +++ + GRID+LVNNAGITQP+K ++I P +YD VLDV+LRGTL  SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  151  AVIPHMRSRKQGKIVNLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMARELAPDNVRVN  210
            AVIP MR++  G IV +SSVSAQRGGGIFGGPHYSAAKAGVLGL KAMARE++PD++R+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  211  AICPGFIATDITGGLLTPEKLEEIKAGIPMGRPGTADDVAGCALFLASDLSAYVTGSEVD  270
            +I PG+I TDITGGL+  E+ + I  GIP+GR G+A+DVA  ALFLASDLS+Y+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  271  VNGGSLIH  278
            VNGG LIH
Sbjct  285  VNGGMLIH  292

86) NGR_a02430 in NC_000914


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  241 bits (899),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 156/253 (62%), Positives = 196/253 (78%), Gaps = 4/253 (1%)

Query  1    MLLKGKTAVISGAASKRGIGRATAELFASHGARVAILDINADEAKAAAGDLPPVEHGAHI  60
            MLL+GK A+I+GAAS RGIGRATA  FA HGARV ILD++   A+ AA+ L      +H+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG----EGHL  99

Query  61   GLRCDVADRASCTSASDEVLSAFGVANILINNAGITQPVKTLDISDADWQRIVAVNMTGV  120
            GL  +VAD +    A   ++  FG  ++L+NNAGITQP+KTLDI  +D ++++ V++ G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  LNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPD  180
            L +SQ  IP MR +G+GSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGPD
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  SIRVNCVTPGLIQTDITGDKLSAEMRADIVKGIPLSRLGDARDVANIYLFLASDLSAYVT  240
             IR+N ++PGLI+TDITG+ +  E R  I+ GIPL+RLG A+DVAN  LFLASDLS+Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  241  GAVIDVNGGMLIH  253
            G  +DVNGGMLIH
Sbjct  280  GITLDVNGGMLIH  292

87) Lcho_4270 in NC_010524


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  240 bits (897),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 165/249 (67%), Positives = 204/249 (82%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAVITGGAGLNGLGFATARLMAAQGARVVVldlagaepaaaaaqlgaghlgWVA  60
            MLL++K+A+ITG+A+  G+G ATA   A +GARVV+LDL  + +  AAA LG GHLG  A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKASCDaaaaaVLQAYGRIDVLVNNAGITQPAKTLDITGADYDRILDVSLRGTLYMS  120
            +V+D +    A A++++ +GRIDVLVNNAGITQP KTLDI  +DYD++LDVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMQQQKSGSIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREFGPDGIRI  180
            QAV+P+M+ Q SGSIVC+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMAREFGPD IRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCITPGLIGTDIIKGKLTEEKKAEIAETIPLARLGRADDIGGACVFLASDLSLYCTGITL  240
            N I+PGLI TDI  G + +E++  I E IPL+RLG A+D++ A +FLASDLS Y TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

88) BJ6T_76850 in NC_017249


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  240 bits (894),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 172/253 (68%), Positives = 209/253 (83%), Gaps = 0/253 (0%)

Query  2    REELMLLSGKTAIISGAASPRGIGLATARRFAAEGARVaildidagaatdaaaSLGNSHI  61
            R  LMLL GK AII+GAAS RGIG ATA  FA +GARV ILD+D +AA DAAA+LG++H+
Sbjct  40   RTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL  99

Query  62   GLGCDVADKSSCEQAVARVIESFGGTDVLINNAGITQPVKFLEISAADWDRIQDVNLKGI  121
            GL+ +VAD S   QAVA +IE FG  DVL+NNAGITQP+K L+I ++D D++ DV+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  122  LFLSQAVIPHMRGRKAGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPD  181
            L++SQAVIP MR++ +GSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGPD
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  182  GIRVNCVTPGLIGTDITAGKLTDEMRAKILEGIPLNRLGTAEDVAGIYTFLASDLSAYVT  241
             IR+N ++PGLI TDIT+G + DE R  I+EGIPL RLG+A+DVA    FLASDLS+Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  242  GAVIDVNGGMLIH  254
            G  +DVNGGMLIH
Sbjct  280  GITLDVNGGMLIH  292

89) Bphyt_6140 in NC_010676


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  239 bits (890),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 158/248 (64%), Positives = 198/248 (80%), Gaps = 0/248 (0%)

Query  6    LLDGKVAVISGGASPRGIGMATARKFAAHGARIAIFDLDEKAAVEAAASIGPEHRGYVCN  65
            LL+GK+A+I+G+AS RGIG ATA  FA HGAR+ I+DLDE AA +AAA++G  H G   N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  66   VTDRGACQAAVERTVADFGSIDILINNAGITQAAKFLDIDPESWDRILDVNLRGVLYLSQ  125
            V+D +  + AV   + +FG ID+L+NNAGITQ+ K LDI P   D++LDV+LRG L +SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  126  AVVPQMKKQKSGSIGCMSSVSAQRGGGILGGPHYSaakagvlglakamaRELGNDGIRVN  185
            AV+P M+ Q SGSI CMSSVSAQRGGGI+GGPHYSAAKAGVLGL+KAMARE+G D IR+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  186  CVTPGLIQTDINAGKISDDKRVEILSGIPLNRLGVPDDVAGAFLFLASDLSSYITGAVID  245
             ++PGLI+TDI +G + D++R  I+ GIPL RLG ++DVA A LFLASDLSSY+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  246  VNGGMLIH  253
            VNGGMLIH
Sbjct  285  VNGGMLIH  292

90) OAN307_c00610 in NC_020911


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  238 bits (888),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 160/251 (64%), Positives = 198/251 (79%), Gaps = 1/251 (0%)

Query  1    MKLLRGKTAIITGGASPRGLGKAAAVMFAQHGCRVaildldadaadqaaadlPGAGHVGR  60
            + LL+GK AIITG+AS RG+G+A+AV FAQHG RV ILDLD  AA +AAA L G GH+G 
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGHLGL  101

Query  61   ACDVTNKESCEAIAADLVSAFGQIDILVNIAGITQPLKFMEIEPQNYDDVLDVNLRGTLY  120
            A +V++        A ++  FG+ID+LVN AGITQP+K ++I P +YD VLDV+LRGTL 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  121  MSQALLPHMRDRKGGSIVNMSSVSAQRGGGIFGGPHYSAAKAGILGLTKAMAREVAPDGI  180
            MSQA++P MR + +GSIV MSSVSAQRGGGIFGGPHYSAAKAG+LGL KAMARE +PD I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  RANAICPGFIATDITAGKLTNEMRAQVLDGIPMGRAGTAQDVAGCCLFLASDLSSYVTGS  240
            R N+I PG+I TDIT+G + +E R  +++GIP+GR G+AQDVA   LFLASDLSSY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  241  EVDVNGGSLIH  251
             +DVNGG LIH
Sbjct  282  TLDVNGGMLIH  292

91) Alide_2373 in NC_014910


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  238 bits (886),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 154/249 (62%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLKDKVAVITGGAGINGLGFATARMMAEQGARVaildlaaadpqaaaarlgdGHMGVVA  60
            MLL++K+A+ITG+A+  G+G ATA   A++GARV ILDL  + ++ AAA LG+GH+G+ A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVTDKasceaaaaavqaRYGRIDILVNNAGVTQPAKFLDITGADYDRILDVSLRGTLYAS  120
            NV+D +    A A++  ++GRID+LVNNAG+TQP K LDI  +DYD++LDVSLRGTL  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMLAQQSGAIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREYGGSNIRV  180
            QAV+P+M AQ SG+IVC+SSVSAQRGGGI+GGPHYSAAKAGVLGL++AMARE+G  +IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIATDINKGKIPDDKRQGILDGIPLARIGEPADVAGCVVFLASDLAKYCTGVTL  240
            N ++PGLI TDI  G + D++R++I++GIPL+R+G + DVA   +FLASDL+ Y TG+TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

92) fabG in NC_013855


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  237 bits (885),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 174/249 (70%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLSNKVCVITGAASRRGIGRATAKLFALHGARAIILDLDGSQaaeaaaelgeahrglaC  60
            MLL  K+ +ITGAAS RGIGRATA  FA HGAR +ILDLD S A +AAA LGE+H GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDREACFTAAARVVEEFGRIDVLVNNAGITQPLKLMDIGPKNYEAVTDVSLRGTLYMS  120
            +V+D      A A ++E+FGRIDVLVNNAGITQP+K +DI P +Y+ V DVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QSVIPHMRERKSGSIVCISSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            Q+VIP MR + SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITGDKLTPELRLEILKGIPLNRLGDAEDVARSCLFLASELSSYVTGATL  240
            NS++PGLI+TDITG+ +  E R  I+ GIPL RLG A+DVA + LFLAS+LSSY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

93) blr2167 in NC_004463


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  236 bits (882),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 170/249 (69%), Positives = 207/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLSGKTAIISGAASPRGIGLATARRFAAEGARVaildidagaatdaaaSLGNSHIGLGC  60
            MLL GK AII+GAAS RGIG ATA  FA +GARV ILD+D +AA DAAA+LG++H+GL+ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVADKSSCEQAVARVIESFGGTDVLINNAGITQPVKFLEISAADWDRIQDVNLKGILFLS  120
            +VAD S   QAVA +IE FG  DVL+NNAGITQP+K L+I ++D D++ DV+L+G L++S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPHMRGRKAGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPDGIRV  180
            QAVIP MR++ +GSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGPD IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIGTDITAGKLTDEMRAKILEGIPLNRLGTAEDVAGIYTFLASDLSAYVTGAVI  240
            N ++PGLI TDIT+G + DE R  I+EGIPL RLG+A+DVA    FLASDLS+Y+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

94) fabG2 in NC_016585


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  236 bits (879),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 171/249 (69%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLSNKVCVITGAASRRGIGRATARLFALHGGRAIIldldgaqaaeaaaelgeaHRGYAC  60
            MLL  K+ +ITGAAS RGIGRATA  FA HG+R +ILDLD + A +AAA LGE+H G A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDRDACFAAATRVVEEFGRIDVLVNNAGITQPLKFMEIGPKNYEAVTDVSLRGTLYMS  120
            +V+D      A + ++E+FGRIDVLVNNAGITQP+K ++I P +Y+ V DVSLRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVVPHMRERKSGSIVCISSVSAQRGGGIFGGPHYSaakagvlglakamaRELGPDNVRV  180
            QAV+P MR + SGSIVC+SSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMARE+GPD++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSVTPGLIQTDITGGKLTDELRAEILKGIPLNRLGDAEDVARSCLFLASELSSYITGATL  240
            NS++PGLI+TDITGG + DE R  I+ GIPL RLG A+DVA + LFLAS+LSSY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

95) REMIM1_PF00272 in NC_021911


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  233 bits (867),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 163/253 (65%), Positives = 201/253 (80%), Gaps = 4/253 (1%)

Query  1    MLLIGKTAAISGAASKRGIGRATAQLFAEHGARVaildidadaaaeaaaSLPRVDAGAHL  60
            MLL GK A I+GAAS RGIGRATA  FA+HGARV ILD+D  AA +AAA+L    + +HL
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHL  99

Query  61   GLRCDVADKGSCEDAASKVIASFGSVNALINNAGITQPVKTLDITQAEWERIVAVNMTGV  120
            GL  +VAD +   +A + +I  FG ++ L+NNAGITQP+KTLDI  ++ ++++ V++ G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  LFLSQAFIPHMRDSGGGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPA  180
            L++SQA IP MR  G+GSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGP 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GIRVNSVTPGLIQTDITGGKLTDQMRADIIKGIPLSRLGEAADVANIYLFLASDLSAYVT  240
             IR+NS++PGLI+TDITGG + D+ R  II GIPL+RLG A DVAN  LFLASDLS+Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  241  GAVIDVNGGMLIH  253
            G  +DVNGGMLIH
Sbjct  280  GITLDVNGGMLIH  292

96) Bphy_5875 in NC_010625


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  232 bits (865),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 175/249 (71%), Positives = 209/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLKNQVVIITGAASARGIgkatakamaargarvaILDLKQADAESAARDLGDGHLGLac  60
            MLL+ ++ IITGAAS RGIG+ATA + A +GARV ILDL ++ A  AA  LG+GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   dvtdkaacvaaanavidTYGRIDVLVNNAGITQPIKTLEIARENFDAVIGVSLLGTLYMS  120
            +V+D +    A  ++I+ +GRIDVLVNNAGITQPIKTL+I   ++D V++VSL GTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPWMKKQQSGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADRIRV  180
            QAVIP M+ Q SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+D+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPEMRADIIKGIPLGRLGEANDIANACVFLASDLSTYLTGITL  240
            NSI+PGLI+TDITG+ +  E R  II GIPLGRLG A+D+ANA +FLASDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

97) MDS_1708 in NC_015410


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  232 bits (865),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 166/249 (67%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  5    LLLDGKVAMISGAASARGIGLATARLFASHGATVAIldldegaaieaaaaigPQHRGYAC  64
            +LL+GK+A+I+GAAS RGIG ATA  FA HGA V ILDLDE+AA +AAA++G  H G A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  65   NVADKDACLQATERAIADFGRIDVLINNAGITQPVKTLEIDPASWDRILDVNLRGVLYLS  124
            NVAD     QA    I +FGRIDVL+NNAGITQP+KTL+I P+  D++LDV+LRG L +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  125  QAVIPHMQAQGSGSIACMSSVSAQRGGGILGGPHYSaakagvlglakamaREFGPSNIRV  184
            QAVIP M+AQGSGSI CMSSVSAQRGGGI+GGPHYSAAKAGVLGL+KAMAREFGP +IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  185  NCVTPGLIQTDISAGKLSDQQKAEIAASIPLNRLGNAEEVAGAYLFLASNLSAYITGAVI  244
            N ++PGLI+TDI++G + D+++  I  +IPL RLG A++VA A LFLAS+LS+Y+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  245  DVNGGMLIH  253
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

98) BamMC406_4933 in NC_010552


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  230 bits (858),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 176/249 (71%), Positives = 205/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLDNKTIIVTGAASPRGIGKataralaahgariaildlrredaeaaaaelGTNHLGLAC  60
            MLL+ K  I+TGAAS RGIG+ATA ++A HGAR+ ILDL    A  AAA LG  HLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDRDACVAAARATLEHYGRIDGLVNNAGITQPVRTLDISGRDFDAIVDVNLRGTLYMS  120
            +V+D      A  + +EH+GRID LVNNAGITQP++TLDI   D+D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMKEQRGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADHIRI  180
            QAV+P+M+ Q +GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+D+IRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPEMREEIIKGIPLGRLGDAADVANACLFLLSDLSSYLTGITL  240
            NSI+PGLI+TDITG+ +  E R+ II GIPLGRLG A DVANA LFL SDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

99) Bamb_4414 in NC_008391


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  229 bits (854),  Expect = 7e-62, Method: Compositional matrix adjust.
 Identities = 176/249 (71%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLDNKTIIVTGAASPRGIGKataralaahgariaildlrredaeaaaadlGTGHLGLAC  60
            MLL+ K  I+TGAAS RGIG+ATA ++A HGAR+ ILDL    A  AAA LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDRDACVAAARATLERYGRIDGLVNNAGITQPVRTLDISGRDFDAIVDVNLRGTLYMS  120
            +V+D      A  + +E++GRID LVNNAGITQP++TLDI   D+D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMKEQRGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADHIRI  180
            QAV+P+M+ Q +GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+D+IRI
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPEMREEIIKGIPLGRLGDAADVANACLFLLSDLSSYLTGITL  240
            NSI+PGLI+TDITG+ +  E R+ II GIPLGRLG A DVANA LFL SDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

100) RHECIAT_PC0000768 in NC_010997


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  228 bits (851),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 159/253 (63%), Positives = 200/253 (80%), Gaps = 4/253 (1%)

Query  1    MLLNGKTAVISGAASRRGIGRATAQLFAEHGARVaildidadaaaeaaaalPSVKSGNHV  60
            MLL+GK A+I+GAAS RGIGRATA  FA+HGARV ILD+D  AA +A    ++  +  H+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDA----AATLGEGHL  99

Query  61   GLRCDVAEKSSCADAASKVIASFGSVNALINNAGITQPVTTLDITEADWQRIVAVNMTGV  120
            GL  +VA+ S   +A + +I  FG ++ L+NNAGITQP+ TLDI  +D ++++ V++ G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  LFLSQAFIPYMRDNGGGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPA  180
            L++SQA IP MR +G+GSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGP 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GIRVNSVTPGLIQTDITGGKLTDQMRADIIKGIPLSRLGEAADVANIYLFLASDLSAYVT  240
             IR+NS++PGLI+TDITGG + D+ R  II GIPL+RLG A DVAN  LFLASDLS+Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  241  GAVIDVNGGMLIH  253
            G  +DVNGGMLIH
Sbjct  280  GITLDVNGGMLIH  292

101) Bmul_4988 in NC_010086


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  227 bits (845),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 173/249 (70%), Positives = 210/249 (85%), Gaps = 0/249 (0%)

Query  1    MLLENRIIVVTGAASPRgigkataqalaaqgariaildlreedaraaaadlGSGHLGLAC  60
            MLL+ +I ++TGAAS RGIG+ATA ++A +GAR+ ILDL E  AR AAA LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKAACVAAARATLERYGRIDGLVNNAGITQPVRTLDIGAKDFDAIVDVNLRGTLYMS  120
            +V+D +    A  + +E++GRID LVNNAGITQP++TLDI + D+D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPAMKEQQGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPDRIRV  180
            QAVIP+M+ Q +GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGPD+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NAITPGLIQTDITGDKLTPDMRADIVKGIPLGRLGDAADVANACLFLVSDLSTYLTGITL  240
            N+I+PGLI+TDITG+ +  + R  I+ GIPLGRLG A DVANA LFL SDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

102) fabG in NC_010805


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  227 bits (845),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 173/249 (70%), Positives = 210/249 (85%), Gaps = 0/249 (0%)

Query  1    MLLENRIIVVTGAASPRgigkataqalaaqgariaildlreedaraaaadlGSGHLGLAC  60
            MLL+ +I ++TGAAS RGIG+ATA ++A +GAR+ ILDL E  AR AAA LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   DVTDKAACVAAARATLERYGRIDGLVNNAGITQPVRTLDIGAKDFDAIVDVNLRGTLYMS  120
            +V+D +    A  + +E++GRID LVNNAGITQP++TLDI + D+D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPAMKEQQGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPDRIRV  180
            QAVIP+M+ Q +GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGPD+IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NAITPGLIQTDITGDKLTPDMRADIVKGIPLGRLGDAADVANACLFLVSDLSTYLTGITL  240
            N+I+PGLI+TDITG+ +  + R  I+ GIPLGRLG A DVANA LFL SDLS+YLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

103) Xaut_1541 in NC_009720


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  224 bits (834),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 151/260 (59%), Positives = 203/260 (79%), Gaps = 0/260 (0%)

Query  23   RPTKIGSGGRIVLLKGKTAVISGGAGARGIGFATAKTFAAQGARVAILDLDaagaakaaa  82
            R  K      ++LL+GK A+I+G+A+ RGIG ATA TFA +GARV ILDLD ++A  AAA
Sbjct  33   RTHKNNQRTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA  92

Query  83   ELGPEHVGIGCDVTDKADCARAIGEVLAATGQIDILINNAGITQAIKVWDIDPESWARIQ  142
             LG  H+G++ +V+D ++  +A++ ++   G+ID+L+NNAGITQ+IK  DI P    ++ 
Sbjct  93   TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVL  152

Query  143  DVNLKGVLYLSQAVMPHMRERKAGAIACMSSVSAQRGGGILGGAHYSaakagvlglakam  202
            DV+L+G L +SQAV+P MR + +G+I CMSSVSAQRGGGI+GG+HYSAAKAGVLGL+KAM
Sbjct  153  DVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAM  212

Query  203  aRELGADGIRVNCVTPGLIQTDINAGKISDDARVKILENIPLNRLGVPQDVANIFLFLAS  262
            ARE+G+D IR+N ++PGLI+TDI +G + D+ R  I+E IPL RLG +QDVAN  LFLAS
Sbjct  213  AREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLAS  272

Query  263  DLSAYVTGAVIDVNGGMLIH  282
            DLS+Y+TG  +DVNGGMLIH
Sbjct  273  DLSSYLTGITLDVNGGMLIH  292

104) BYI23_C006660 in NC_016590


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  221 bits (823),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 156/248 (63%), Positives = 202/248 (82%), Gaps = 0/248 (0%)

Query  6    LLEGKVAVISGAASPRGIGMATARMFAKHGAKVaildldeaaareaaGSIGPEHRGYVCN  65
            LL+GK+A+I+GAAS RGIG ATA  FA+HGA+V ILDLDE+AAR+AA+++G  H G   N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  66   VTDRAACDAAVDRIVTDFGAIDILINNAGITQAAKLLDIDSASWDRILDVNLRGVLYLSQ  125
            V+D +    AV  I+ +FG ID+L+NNAGITQ+ K LDI ++  D++LDV+LRG L +SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  126  AVVPVMKKNGGGSIGCMSSVSAQRGGGILGGPHYSaakagvlglakamaREFGIDGIRVN  185
            AV+P M+ +G+GSI CMSSVSAQRGGGI+GGPHYSAAKAGVLGL+KAMAREFG D IR+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  186  CVTPGLIQTDINAGKISDDKRVEILAGIPLNRLGVPDDVAGAFLFLSAPISSYITGAVID  245
             ++PGLI+TDI +G + D++R  I+ GIPL RLG ++DVA A LFL++ +SSY+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  246  VNGGMLIH  253
            VNGGMLIH
Sbjct  285  VNGGMLIH  292

105) BBta_3267 in NC_009485


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  219 bits (815),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 170/249 (69%), Positives = 206/249 (83%), Gaps = 0/249 (0%)

Query  1    MLLSGKTAIISGAASRRGIGLATARRFAAEGARVaildidaaaaadaaatlgaahlglgC  60
            MLL GK AII+GAAS RGIG ATA  FA +GARV ILD+D +AA DAAATLG +HLGL+ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   NVADKSSCNDAVAQVIAKFGVIDILINNAGITQPVKLLDITPDDWERIQDVNLKGVLFLS  120
            NVAD S  ++AVA +I  FG ID+L+NNAGITQP+K LDI P+D +++ DV+L+G L++S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVIPHMRGRKQGSIACMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGPDGIRV  180
            QAVIP MR++  GSI CMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFGPD IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVTPGLIGTDITAGKLTDDMKAKILEGIPLNRLGTADDVAGIYTFLASDLSAYVTGAVI  240
            N ++PGLI TDIT+G + D+ +  I+EGIPL RLG+A+DVA    FLASDLS+Y+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

106) fabG1 in NC_016586


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  216 bits (805),  Expect = 6e-58, Method: Compositional matrix adjust.
 Identities = 160/248 (65%), Positives = 202/248 (82%), Gaps = 0/248 (0%)

Query  6    LLDGKVAVISGAASLRGIGMATARMFAEQGAKiaildldgtaaadaaaligpaHRGYACN  65
            LL+GK+A+I+GAAS RGIG ATA  FA++GA++ ILDLD +AA DAAA +G +H G A N
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  66   VTDRAACQGAVERVLADFGQIDILVNNAGITQPAKTVDIDPESWDRILDVNLRGVLYLSQ  125
            V+D +  + AV  ++ +FG+ID+LVNNAGITQP KT+DI P   D++LDV+LRG L +SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  126  AVIPHMQQRGQGSIACMSSVSAQRGGGILGGPHYSaakagvlglakamaRELGKDGIRVN  185
            AVIP M+ +G GSI CMSSVSAQRGGGI+GGPHYSAAKAGVLGL+KAMARE+G D IR+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  186  CVTPGLIQTDINAGKISDDKKVEILAGIPLNRLGNVQDVAGAFLFLASDLSGYITGAVID  245
             ++PGLI+TDI +G + D+++  I+ GIPL RLG  QDVA A LFLASDLS+Y+TG  +D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  246  VNGGMLIH  253
            VNGGMLIH
Sbjct  285  VNGGMLIH  292

107) Bcen_6425 in NC_008062


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  209 bits (777),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 174/249 (70%), Positives = 208/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLDNRTIIVTGAASPRGIGKataralaahgarvaIldlrrddaeaaaaelgaghlglac  60
            MLL+ +  I+TGAAS RGIG+ATA ++A HGARV ILDL    A  AAA LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   dvtdrdacaaaaratLEHFGRIDGLVNNAGITQPVRTLEISARDFDAIVDVNLRGTLYMS  120
            +V+D      A  + +EHFGRID LVNNAGITQP++TL+I + D+D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMQAQRGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADRVRV  180
            QAV+P+M+AQ +GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+D++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPDMREDIIKGIPLGRLGEAADVAHACLFLLSDLSSYLTGITL  240
            NSI+PGLI+TDITG+ +  + R+ II GIPLGRLG A DVA+A LFL SDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

108) Bcen2424_6660 in NC_008544


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  209 bits (777),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 174/249 (70%), Positives = 208/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLDNRTIIVTGAASPRGIGKataralaahgarvaIldlrrddaeaaaaelgaghlglac  60
            MLL+ +  I+TGAAS RGIG+ATA ++A HGARV ILDL    A  AAA LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   dvtdrdacaaaaratLEHFGRIDGLVNNAGITQPVRTLEISARDFDAIVDVNLRGTLYMS  120
            +V+D      A  + +EHFGRID LVNNAGITQP++TL+I + D+D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMQAQRGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADRVRV  180
            QAV+P+M+AQ +GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+D++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPDMREDIIKGIPLGRLGEAADVAHACLFLLSDLSSYLTGITL  240
            NSI+PGLI+TDITG+ +  + R+ II GIPLGRLG A DVA+A LFL SDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

109) Bcenmc03_6258 in NC_010512


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  207 bits (768),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 173/249 (70%), Positives = 207/249 (84%), Gaps = 0/249 (0%)

Query  1    MLLDNRTIIVTGAASPRGIGKataralaahgarvaIldlrrddaeaaaaelgaghlglac  60
            MLL+ +  I+TGAAS RGIG+ATA ++A HGARV ILDL    A  AAA LG GHLGLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   dvtdrdacaaaaraaLEHFGSIDGLVNNAGITQPVRTLEISARDFDAIVDVNLRGTLYMS  120
            +V+D      A  + +EHFG ID LVNNAGITQP++TL+I + D+D ++DV+LRGTL MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QAVLPAMQAQRGGSIVCMSSVSAQRGGGIFGGPHYSaakagvlglakamaREFGADRVRV  180
            QAV+P+M+AQ +GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL+KAMAREFG+D++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NSITPGLIQTDITGDKLTPDMREDIIKGIPLGRLGEAADVAHACLFLLSDLSSYLTGITL  240
            NSI+PGLI+TDITG+ +  + R+ II GIPLGRLG A DVA+A LFL SDLSSYLTGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGMLIH  249
            DVNGGMLIH
Sbjct  284  DVNGGMLIH  292

110) Gobs_1718 in NC_013757


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  187 bits (695),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 120/253 (48%), Positives = 183/253 (73%), Gaps = 4/253 (1%)

Query  1    MSVSDKTAIVTGAGSKRGIGRATAHTLAAAGWNIAILDLDEGSAKDAAQEIAEQHGVQAV  60
            M + +K AI+TGA+S RGIGRATA T+A  G  + ILDLDE++A+DAA  ++E H    +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  61   GIGCDVTDEASVESALAALDGSAPPVGALVNNAGITSPTPFLEVSGEEWDRIFAVNVRGA  120
            G++ +V+DE+ V  A+A++      ++ LVNNAGIT P   L++   + D+++ V++RG+
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  YNITRRVAPGMAERGFGRIVFLSSVSAERGGGVFGGVAYSAAKAAQLGFTRALARELGPN  180
              +++ V P M  +G G IV +SSVSA+RGGG+FGG  YSAAKA+ LG+ +A+ARE+GP+
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GVTVNAVAPGLIDTDITGGALEGERKQELVAGIPVGRNGRVADVADLITYLCREETGYIT  240
             + +N++APGLI+TDITGG +++ER++ ++ GIP+GR G   DVA+   +L  + ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  241  GATYDVNGGSHIH  253
            G T DVNGG  IH
Sbjct  280  GITLDVNGGMLIH  292

111) MY9_2663 in NC_017743


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  185 bits (685),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 108/246 (44%), Positives = 184/246 (75%), Gaps = 4/246 (1%)

Query  4    LNDQVAIVTGSGSEKGIGRTIALTLAKQGASIVVADMNQTGILKTVEAITESGGRAVGVE  63
            L++++AI+TG++SE+GIGR+ A+T+A++GA +V+ D+++++   +  ++ E+    +G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGLA  102

Query  64   VNVTNKESVDHMIAKTLEEFGRIDILVNNAGISQKVTVQDMTLEDMTRVFNVNMFGLFLC  123
             NV++   V + +A  +E+FGRID+LVNNAGI+Q +   D+   D  +V++V++ G +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  TQAVLETMKKQQYGRIINLSSVSAKRGGGVFGGAHYSASKAAVLGFSKNLAREVGKDGIT  183
            +QAV+ TM+ Q  G I+ +SSVSA+RGGG+FGG+HYSA+KA+VLG++K +ARE G D I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  184  VNCVAPGLINTDIWKSLSEEDAKK-VIDNIPMGRPGETEEIAAAITFLATKEAAYITGEE  242
            +N +APGLI+TDI  +L +++ +  +I+ IP+GR G ++++A A  FLA+  ++Y+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  243  IDINGG  248
            +D+NGG
Sbjct  283  LDVNGG  288

112) BSn5_04075 in NC_014976


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  184 bits (684),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 107/249 (43%), Positives = 184/249 (74%), Gaps = 4/249 (1%)

Query  1    MFTLNNQVAIVTGSGSKKGIGRTIALTLAKQGASIVVADMNQTGIQDTVEAITESGGRAV  60
            +  L+ ++AI+TG++S +GIGR+ A+T+A++GA +V+ D+++++ +D+  ++ E+    +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HL  99

Query  61   GVEVNVTNKESVDHMIAKTLEAFGRIDILVNNAGISQKVTVQDMTLEDMTRVFNVNMFGL  120
            G+  NV++   V + +A  +E FGRID+LVNNAGI+Q +   D+   D  +V++V++ G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  FLCTQAVLETMKKQQYGRIINLSSVSAKRGGGVFGGAHYSASKAAVLGFSKNLAREVGKD  180
            +L +QAV+ TM+ Q  G I+ +SSVSA+RGGG+FGG+HYSA+KA+VLG++K +ARE G D
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GITVNCVAPGLVNTDIWKSLSEEDAKK-VIDNIPVGRPGETKEIAAAITFLAAKEAAYIT  239
             I +N +APGL++TDI  +L +++ +  +I+ IP+GR G ++++A A  FLA+  ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  240  GEEIDINGG  248
            G  +D+NGG
Sbjct  280  GITLDVNGG  288

113) BSUW23_12920 in NC_014479


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  183 bits (677),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 109/249 (44%), Positives = 184/249 (74%), Gaps = 4/249 (1%)

Query  1    MFTLNNQVAIVTGSGSEKGIGRTIALTLAKQGASIIVADINQGGIQDTVEAITKNGGKAI  60
            +  L+ ++AI+TG++SE+GIGR+ A+T+A++GA +++ D+++++ +D+  ++   G   +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHL  99

Query  61   GVEVNVTNKESIDQMVAKTLEAFGRIDILVNNAGISQKVTVQDMTLEDMTKVFNVNMFGL  120
            G+  NV++   + Q VA  +E FGRID+LVNNAGI+Q +   D+   D  KV++V++ G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  FLCTQSVLETMKKQQYGRIINLSSVSAKRGGGVFGGAHYSASKAAVLGFSKNLAREVGKD  180
            +L +Q+V+ TM+ Q  G I+ +SSVSA+RGGG+FGG+HYSA+KA+VLG++K +ARE G D
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GITVNCVAPGLVNTDIWRSLPKEDAAK-VIDSIPMGRPGETKEIAAAITFLATKEASYIT  239
             I +N +APGL++TDI  +L +++    +I++IP+GR G ++++A A  FLA+  +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  240  GEEIDINGG  248
            G  +D+NGG
Sbjct  280  GITLDVNGG  288

114) B1NLA3E_07275 in NC_021171


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  180 bits (668),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 108/246 (44%), Positives = 179/246 (73%), Gaps = 4/246 (1%)

Query  4    LQDRVAIVTGSGSQKGIGRTIALTLAKQGAAVIIADINLEGVQDTVNAITEAGGKALGVE  63
            LQ+++AI+TG++S++GIGR+ A+T+A++GA V+I D++  + +D+  ++ E+    LG+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGLA  102

Query  64   LNVTSKESCDAMVEKTLATFGRIDILVNNAGISQKVTVQDMTLEDITRIFSVNMFGLFLC  123
             NV+        V   +  FGRID+LVNNAGI+Q +   D+   D  +++ V++ G +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  TQSVLETMKKQKFGRIISLSSVSAKRGGGVFGGPHYSASKAAVLGFSKNLAREVALDGIT  183
            +Q+V+ TM+ Q  G I+ +SSVSA+RGGG+FGGPHYSA+KA+VLG++K +ARE + D I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  184  VNCVAPGLVNTEIWKSLPEEDAK-AVIAGIPMGRPGETTEIASTIAFLASEEASYITGEE  242
            +N +APGL++T+I  +L +++ + A+I GIP+GR G + ++A++  FLAS+ +SY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  243  IDINGG  248
            +D+NGG
Sbjct  283  LDVNGG  288

115) Pden_0196 in NC_008686


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  179 bits (665),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 114/255 (45%), Positives = 182/255 (72%), Gaps = 8/255 (3%)

Query  19   LDGKVCVIVGVASLRGIGYATAELFARHGAKLVVVDLMMDDTIAADVSQAIATRNGEAPE  78
            L+GK+ +I G AS RGIG ATA  FA+HGA++V++DL  D++ A D + ++    GE+  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAATL----GEGH-  98

Query  79   LLGLRCDIGRAADCQGVIDQAVARFGRIDCLVNTAAIVKSDGLLAISGDDLDLILNVNLK  138
             LGL  +++  ++ +  +   + +FGRID LVN A+I ++   L I  +D D +L+V+L+
Sbjct  99   -LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  139  GAFNLCQNALRVFEEQGSGTIVNIASVAAQRGGGLVGGAHYAASKGGVISLTRSIAREFG  198
            G++ + Q  +     QGSG+IV ++SV+AQRGGG+ GG+HY+A+K+GV++L +++AREFG
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  199  PKGIRANAICPSMTETGMLDGNVTEAQFAQIVDAIPLKRAGRPEDIANACLYLASDLSAY  258
            P  IR N+I P++ +T++ +G + + +   I+++IPL R G ++D+ANA L+LASDLS+Y
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  259  VTGTTLDVNGGSHIH  273
            +TG TLDVNGG  IH
Sbjct  278  LTGITLDVNGGMLIH  292

116) VAPA_1c06630 in NC_022247


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  178 bits (659),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 114/258 (45%), Positives = 185/258 (72%), Gaps = 11/258 (4%)

Query  1    MLLKDKVCIVAGAASTCGIGYATAELFVEHGAKVVIVDVAIDERSGAALEASIRQATRS-  59
            MLL++K+ I++GAAS  GIG ATA  F +HGA+VVI+D+          E++ R+A+ + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLD---------ESAARDAAATL  94

Query  60   DAEVLAVRCDIANAADCDQMVSAAIKRFGTVDCLVNSAGIVRAKPLVEISEQEYDLVVDV  119
            +   L++  ++A+ ++  Q V++ I +FG +D LVN+AGI ++   ++I   +YD V+DV
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDV  154

Query  120  NLKGAFNLCKSVLNFFLQKQNGVIVNVASAAAQRGGGLVGGAHYAAAKGGVISLTRTIAR  179
            +L+G++ + ++V+     + +G IV ++S +AQRGGG+ GG+HY+AAK+GV++L +++AR
Sbjct  155  SLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAR  214

Query  180  EYGAQGIRANVICPAMIETTMLDGL-SDERLLGIIDGIPLRRTGTTREAAGVCLFLASDL  238
            E+G++ IR N I P++I+T + +GL  DER  +II+GIPL R G++++ A   LFLASDL
Sbjct  215  EFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  239  SAYVTGATLDVNGGSHIH  256
            S+Y+TG TLDVNGG  IH
Sbjct  275  SSYLTGITLDVNGGMLIH  292

117) SACE_4767 in NC_009142


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  177 bits (656),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 125/249 (51%), Positives = 185/249 (75%), Gaps = 5/249 (2%)

Query  5    RTAVITGAGSERGIGRETALHLADAGFAVAVLDIDgeaaertaaaagergaVPALGLAAD  64
            + A+ITGA+SERGIGR TA+ +A+ G  V +LD+D  AA  +AA+ GE      LGLAA+
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----LGLAAN  104

Query  65   VTDAASVGRAVGELESSDLPPVAALVNNAGITRPTRFLDIEQAEWDLVFSVNVTGTYLVT  124
            V+D + V +AV+ +   ++  +  LVNNAGIT+P + LDI  ++ D V+ V++ GT L++
Sbjct  105  VADESQVKQAVATI-IEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  125  RRVLPGMIERGYGRIVNLSSVSAERGGGVFGGSHYSAAKAAVLGLTRALAREAGPHGVVV  184
            + V+P M  +G G IV +SSVSA+RGGG+FGG+HYSAAKA+VLGL +A+ARE GP+ + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  185  NAVAPGLIDTDITGGALAGERKAKLIADIPVGRNGRTEDVAATVTFLAGEHVGYITGATF  244
            N++APGLI+TDITGG + +ER+  +I +IP+GR G ++DVA +  FLA++  +Y+TG T+
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  245  DINGGSHIQ  253
            D+NGG  I+
Sbjct  284  DVNGGMLIH  292

118) Lcho_0824 in NC_010524


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  170 bits (630),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 113/258 (44%), Positives = 182/258 (71%), Gaps = 11/258 (4%)

Query  1    MLLKDKVCVIAGAASLRSIGYATAELFVEHGAKVVVTDLMMDEQVLAGIRSSI-ESQLKR  59
            MLL++K+ +I+GAAS R+IG ATA  F +HGA+VV+ DL  DE    +  +++ E++L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAATLGEGHL--  99

Query  60   PVEIHGLRCDVSKADDCDQLVRQVLDLHGTIDCLVNSAGIVKSTPLLDIGAQELDLMFDV  119
                 GL  +V+   +  Q V  +++  G ID LVN+AGI ++   LDI + + D ++DV
Sbjct  100  -----GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDV  154

Query  120  NLKGAFFLCQSVLRVFVERRAGTIVNVASLAAQRGGGLVGGPHYAASKGGMLSLTRSIAR  179
            +L+G++++ Q+V+     + +G+IV ++S++AQRGGG+ GGPHY+A+K+G+L+L +++AR
Sbjct  155  SLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAR  214

Query  180  EFGPMGIRANAICPAMIDTPMLDGL-PADRLSGIIDAIPLKRTGTRREAAGACLFLACEL  238
            EFGP  IR N+I P++I+T + +GL   +R  +II++IPL R G+ ++ A A LFLA +L
Sbjct  215  EFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  239  SGFVTGATLDVNGGTHIH  256
            S+++TG TLDVNGG  IH
Sbjct  275  SSYLTGITLDVNGGMLIH  292

119) KNP414_03122 in NC_015690


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  165 bits (610),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 111/246 (46%), Positives = 181/246 (74%), Gaps = 4/246 (1%)

Query  4    LTGRVAIVTGSGSARGIGRTIAFTLAEQEAKVVIADMNKEGIEETVRAIREAGGEAIGVE  63
            L G++AI+TG++S RGIGR+ A T+A++ A+VVI D++  +  ++  ++   G   +G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLGLA  102

Query  64   VNVTDKASVDAMVEEVLAVYGRIDILVNNAGISQKVTVQDMTLADMNKIFNVNMYGLFLC  123
             NV+D + V   V  ++  +GRID+LVNNAGI+Q +   D+  +D +K+++V++ G +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  SQAVLEPMKSRQYGRIVNISSVSAKRGGGVFGGAHYSASKAAVLGFSKNLAREVAKDGIT  183
            SQAV+  M+++  G IV +SSVSA+RGGG+FGG+HYSA+KA+VLG++K +ARE + D I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  184  VNSVAPGLVNTDIWKSL-DEQSAASVIAGIPMGRPGETReiaaaiaflaseeasYITGEE  242
            +NS+APGL++TDI  +L +++   ++I GIP+GR G ++++A A  FLAS+ +SY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  243  IDINGG  248
            +D+NGG
Sbjct  283  LDVNGG  288

120) PM3016_3349 in NC_016935


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  165 bits (610),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 111/246 (46%), Positives = 181/246 (74%), Gaps = 4/246 (1%)

Query  4    LTGRVAIVTGSGSARGIGRTIAFTLAEQEAKVVIADMNKEGIEETVRAIREAGGEAIGVE  63
            L G++AI+TG++S RGIGR+ A T+A++ A+VVI D++  +  ++  ++   G   +G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLGLA  102

Query  64   VNVTDKASVDAMVEQVLAVYGRIDILVNNAGISQKVTVQDMTLADMNKIFNVNMYGLFLC  123
             NV+D + V   V  ++  +GRID+LVNNAGI+Q +   D+  +D +K+++V++ G +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  SQAVLEPMKSRQYGRIVNISSVSAKRGGGVFGGAHYSASKAAVLGFSKNLAREVAKDGIT  183
            SQAV+  M+++  G IV +SSVSA+RGGG+FGG+HYSA+KA+VLG++K +ARE + D I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  184  VNSVAPGLVNTDIWKSL-DEQSAASVIAGIPMGRPGETReiaaaiaflaseeasYITGEE  242
            +NS+APGL++TDI  +L +++   ++I GIP+GR G ++++A A  FLAS+ +SY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  243  IDINGG  248
            +D+NGG
Sbjct  283  LDVNGG  288

121) B2K_17350 in NC_017672


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  165 bits (610),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 111/246 (46%), Positives = 181/246 (74%), Gaps = 4/246 (1%)

Query  4    LTGRVAIVTGSGSARGIGRTIAFTLAEQEAKVVIADMNKEGIEETVRAIREAGGEAIGVE  63
            L G++AI+TG++S RGIGR+ A T+A++ A+VVI D++  +  ++  ++   G   +G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLGLA  102

Query  64   VNVTDKASVDAMVEQVLAVYGRIDILVNNAGISQKVTVQDMTLADMNKIFNVNMYGLFLC  123
             NV+D + V   V  ++  +GRID+LVNNAGI+Q +   D+  +D +K+++V++ G +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  SQAVLEPMKSRQYGRIVNISSVSAKRGGGVFGGAHYSASKAAVLGFSKNLAREVAKDGIT  183
            SQAV+  M+++  G IV +SSVSA+RGGG+FGG+HYSA+KA+VLG++K +ARE + D I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  184  VNSVAPGLVNTDIWKSL-DEQSAASVIAGIPMGRPGETReiaaaiaflaseeasYITGEE  242
            +NS+APGL++TDI  +L +++   ++I GIP+GR G ++++A A  FLAS+ +SY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  243  IDINGG  248
            +D+NGG
Sbjct  283  LDVNGG  288

122) Calkr_1139 in NC_014721


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  163 bits (601),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 178/251 (71%), Gaps = 9/251 (3%)

Query  3    LLKDKVVLITGAS--RGIGRAIALKFAQNGANVIINYSSSQSQAEELKEEIEKIGTKAMI  60
            LL++K+ +ITGA+  RGIGRA A+ FAQ+GA V+I     + +    ++    +G   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  61   IKCDVSNADEVSQMFSQVEKEFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAF  120
            +  +V++  +V Q  + +  +FGR+D+LVNNAGIT+    L +   D+DKV+ ++L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LCARAAAKMMVKQRSGNIINISSVVGIAGN--IGQANYAASKAGIIGLTKSLAKELASRN  178
            L ++A    M  Q SG+I+ +SSV +  G   +G ++Y+A+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNAIAPGFIKTDMT-EVLSDKVKEAMLSSIPLGRFGEADEVANVALFLASNLSSYITG  237
            IR+N+IAPG+I TD+T  ++ D  ++A++ +IPLGR+G A++VAN ALFLAS+LSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIVVDGGMIM  248
              + V+GGM++
Sbjct  281  ITLDVNGGMLI  291

123) Asphe3_20030 in NC_015145


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  162 bits (599),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 106/248 (43%), Positives = 174/248 (71%), Gaps = 4/248 (1%)

Query  8    RTAIITGAVSERGIGRATANYLAAQGWNIGIIDLDDALCKATAKELASQYGVQAHGAGAN  67
            + AIITGA SERGIGRATA  +A +G  + I+DLD++    +A++ A+  G    G +AN
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDES----AARDAAATLGEGHLGLAAN  104

Query  68   VADEASVRAAIDSIEAELPQVVALANVAGVSSPVPYLELDAAEWNRVLDINLNGVHYATK  127
            VADE+ V+ A+ +I  ++ ++  L N AG++ P+  L++ +++ ++VLD++L G    ++
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  128  RVAESMARNRIGRIVNISSVSAQRGGGTFSKTPYSAAKAGVIGLTRATARELGEYDITVN  187
             V  +M  +  G IV +SSVSAQRGGG F+   YSAAKAGV+GL +A ARE+G  +I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  188  AISPGPIDTDIMGGTLSEERKEELTKDLVVNRVGSTRDIAAAIAFLFSEDAGYISGQTLN  247
            +I+PG I+TDI GG + +ER++ +  ++ + R+G+++D+A A  FL S+ ++Y++G TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  248  VDGGLYMH  255
            V+GG+ +H
Sbjct  285  VNGGMLIH  292

124) Athe_1156 in NC_012034


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  162 bits (599),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 178/251 (71%), Gaps = 9/251 (3%)

Query  3    LLKDKVALITGAS--RGIGRAIALKFAQNGANVVINYSSSQSQAENLKEEIEKIGTKTMI  60
            LL++K+A+ITGA+  RGIGRA A+ FAQ+GA VVI     + +    ++    +G   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  61   IKCDVSNPDEVNQMFSQVENEFGRLDILVNNAGITKDGLILRINEEDFDKVISINLKGAF  120
            +  +V++  +V+Q  + + ++FGR+D+LVNNAGIT+    L I   D+DKV+ ++L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LCARAAAKMMVKQRFGNIINISSVVGIAGNV--GQANYAASKAGIIGLTKSLAKELASRN  178
            L ++A    M  Q  G+I+ +SSV +  G    G ++Y+A+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNAIAPGFIKTDMT-EVLSDKVKEAMLSSIPLGRFGEADEIANVALFLASSLSSYITG  237
            IR+N+IAPG+I TD+T  ++ D  ++A++ +IPLGR+G A+++AN ALFLAS LSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIVVDGGMIM  248
              + V+GGM++
Sbjct  281  ITLDVNGGMLI  291

125) Calla_0568 in NC_015949


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  162 bits (599),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 178/251 (71%), Gaps = 9/251 (3%)

Query  3    LLKDKVALITGAS--RGIGRAIALKFAQNGANVIINYSSSQSQAEELKEEIEKIGTKAMI  60
            LL++K+A+ITGA+  RGIGRA A+ FAQ+GA V+I     + +    ++    +G   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  61   IKCDVSNADEVSQMFSQVEKEFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAF  120
            +  +V++  +V Q  + +  +FGR+D+LVNNAGIT+    L +   D+DKV+ ++L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LCARAAAKMMVKQRSGNIINISSVVGIAGN--IGQANYAASKAGIIGLTKSLAKELASRN  178
            L ++A    M  Q SG+I+ +SSV +  G   +G ++Y+A+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNAIAPGFIKTDMT-EVLSDKVKEVMLSSIPLGRFGKADEVANVALFLASNLSSYITG  237
            IR+N+IAPG+I TD+T  ++ D  ++ ++ +IPLGR+G A++VAN ALFLAS+LSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIVVDGGMIM  248
              + V+GGM++
Sbjct  281  ITLDVNGGMLI  291

126) COB47_1376 in NC_014392


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  162 bits (597),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 178/251 (71%), Gaps = 9/251 (3%)

Query  3    LLKDKVALITGAS--RGIGRAIALKFAQNGANVIINYSSSQSQAENLKEEIEKIGTKAMI  60
            LL++K+A+ITGA+  RGIGRA A+ FAQ+GA V+I     + +    ++    +G   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  61   IKCDVSNSDEVNQMFSQIEKEFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAF  120
            +  +V++  +V+Q  + I  +FGR+D+LVNNAGIT+    L +   D+DKV+ ++L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LCAKAAAKMMVKQRFGNIINISSVVGITGN--IGQANYAASKAGIIGLTKSLAKELASRN  178
            L ++A    M  Q  G+I+ +SSV +  G   +G ++Y+A+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNAIAPGFIKTDMT-EVLSDKVKETMLSSIPLGRFGEADEVANVALFLASSLSSYITG  237
            IR+N+IAPG+I TD+T  ++ D  +++++ +IPLGR+G A++VAN ALFLAS LSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIVVDGGMIM  248
              + V+GGM++
Sbjct  281  ITLDVNGGMLI  291

127) Calhy_1578 in NC_014652


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  160 bits (592),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 176/251 (71%), Gaps = 9/251 (3%)

Query  3    LLKDKVALITGAS--RGIGRAIALKFAQNGANVIINYSSSQSQAENLKEEIEKIGTKTMI  60
            LL++K+A+ITGA+  RGIGRA A+ FAQ+GA V+I     + +    ++    +G   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  61   IKCDVSSADEVNQMFSQVEKEFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAF  120
            +  +V+   +V+Q  + +  +FGR+D+LVNNAGIT+    L +   D+DKV+ ++L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LCARAAARMMVKQRFGNIINISSVVGIAGNV--GQANYAASKAGIIGLTKSLAKELASRN  178
            L ++A    M  Q  G+I+ +SSV +  G    G ++Y+A+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNAIAPGFIKTDMT-EVLSDKVKEAMLSSIPLGRFGEADEVANVALFLASSLSSYITG  237
            IR+N+IAPG+I TD+T  ++ D  ++A++ +IPLGR+G A++VAN ALFLAS LSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIVVDGGMIM  248
              + V+GGM++
Sbjct  281  ITLDVNGGMLI  291

128) Calow_0969 in NC_014657


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  160 bits (591),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 177/251 (71%), Gaps = 9/251 (3%)

Query  3    LLKDKVALITGAS--RGIGRAIALKFAQNGANVIINYSSSQSQAENLKEEIEKIGTKAMI  60
            LL++K+A+ITGA+  RGIGRA A+ FAQ+GA V+I     + +    ++    +G   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  61   IKCDVSNSDEVNQMFFQVEKEFGRIDILVNNAGITKDGLILRMNDEDFDRVIAINLRGAF  120
            +  +V++  +V+Q    +  +FGRID+LVNNAGIT+    L +   D+D+V+ ++LRG++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LCAKAAAKMMVKQRFGNIINISSVVGIAGN--IGQANYAASKAGIIGLTKSLAKELASRN  178
            L ++A    M  Q  G+I+ +SSV +  G   +G ++Y+A+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNAIAPGFIKTDMT-EVLSDKVKEAMLSSIPLGRFGEADEVANVALFLASSLSSYITG  237
            IR+N+IAPG+I TD+T  ++ D  ++A++ +IPLGR+G A++VAN ALFLAS LSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIVVDGGMIM  248
              + V+GGM++
Sbjct  281  ITLDVNGGMLI  291

129) Calkro_1540 in NC_014720


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  159 bits (588),  Expect = 9e-41, Method: Compositional matrix adjust.
 Identities = 104/251 (42%), Positives = 176/251 (71%), Gaps = 9/251 (3%)

Query  3    LLKDKVALITGAS--RGIGRAIALKFAQNGANVVINYSSSQSQAENLKEEIEKIGTKTMI  60
            LL++K+A+ITGA+  RGIGRA A+ FAQ+GA VVI     + +    ++    +G   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  61   IKCDVSNPDEVSHMFSQVEKEFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAF  120
            +  +V++  +V +  + +  +FGR+D+LVNNAGIT+    L +   D+DKV+ ++L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LCARAAAKMMVKQRFGNIINISSVVGIAGNV--GQANYAASKAGIIGLTKSLAKELASRN  178
            L ++A    M  Q  G+I+ +SSV +  G    G ++Y+A+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNAIAPGFIKTDMT-EVLSDKVKEAMLSSIPLGRFGEADEIANVALFLASSLSSYITG  237
            IR+N+IAPG+I TD+T  ++ D  ++A++ +IPLGR+G A+++AN ALFLAS LSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIVVDGGMIM  248
              + V+GGM++
Sbjct  281  ITLDVNGGMLI  291

130) BMQ_1645 in NC_014019


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  158 bits (585),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 98/225 (44%), Positives = 160/225 (72%), Gaps = 4/225 (1%)

Query  25   ALTLAEQGAAVVIADINFDGVQDTVNEIKEAGGKALGIELNVTSKDSCDAMVKKTLEEFG  84
            A+T+A++GA VVI D++  + +D+   + E+    LG+  NV+        V   +E+FG
Sbjct  67   AVTFAQHGARVVILDLDESAARDAAATLGEG---HLGLAANVADESQVKQAVATIIEHFG  123

Query  85   RIDILINNAGISQKVTVQDMTLEDITRVFNVNMFGLFLCTQAVLETMKDQKYGRIISLSS  144
            RID+L+NNAGI+Q +   D+   D  +V++V++ G +L +QAV+ TM+ Q  G I+ +SS
Sbjct  124  RIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSS  183

Query  145  VSAKRGGGVFGGPHYSASKAAVLGFSKNLAREVALDGITVNCVAPGLVNTEIWKSLPEED  204
            VSA+RGGG+FGGPHYSA+KA+VLG++K +ARE + D I +N +APGL++T+I  +L +++
Sbjct  184  VSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDE  243

Query  205  AK-SVIDSIPMGRPGEVKEIAATIAFLASKEASYITGEEIDINGG  248
             + ++I++IP+GR G  +++A +  FLAS  +SY+TG  +D+NGG
Sbjct  244  RRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGG  288

131) TherJR_2074 in NC_014152


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  158 bits (583),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 109/252 (44%), Positives = 181/252 (72%), Gaps = 8/252 (3%)

Query  1    MVLRDKIAIVTGGS--RGIGKAICEALARQGARVVIFDVNAAELQNCVTELKAAGFDAEG  58
            M+L++KIAI+TG++  RGIG+A   ++A++GARVVI+D++ +  ++  + L  + +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   YEVNVAQADKVEEAVAGVIDNLGRIDILVNNAGITRDTLLMRMKEEDWDAVLAVNLKGVF  118
               NVA+  +V +AVA +I+++GRID+LVNNAGIT+    + ++  D D VL V+L+G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCTKAVSRPMMKQRSGVIINISSVVGLMGNA--GQANYAASKAGIIGFTKSVARELASRG  176
              ++AV   M  Q SG I+ +SSV +  G +  G ++Y+A+KAG++G+ K++ARE+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRANAIAPGFIVTQMT-DVLSDEIKGELQKQIPLGRLGQPEDVANLVVFLASDNASYITG  235
            +R N+IAPG+I T++T +++ DE +  +   IPLGRLG ++DVAN  +FLASD +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  QTIAVDGGMVMH  247
             T+ V+GGM++H
Sbjct  281  ITLDVNGGMLIH  292

132) AciPR4_0689 in NC_014963


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  158 bits (583),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 174/247 (71%), Gaps = 8/247 (3%)

Query  4    LTGKTALITGAS--QGIGRAIALQLAADGVQIALAARNESKLTEVKAEIEAAGGTALTFA  61
            L GK A+ITGA+  +GIGRA A+ +A +G ++ +   +ES     +    + G   L +A
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDES---AARDAAATLGEGHLGLA  102

Query  62   LDVSSEDSIKSTAKAVIAHFGKLDILVNNAGITKDGLVLRMKLADFEDVLRTNLTGAFLL  121
             +V+ E  +K +  ++I HFG++D+LVNNAGIT+    L ++ +D++ VL  +L G++L+
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  122  TQAVLSSMMKARSGRIINITSVVGEVGAA--GQANYAASKAGMIGLTKSLAREFASRNIT  179
            +QAV+++M    SG I+ ++SV ++ G++  G ++Y+A+KAG++GL K++AREF++ +I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  180  VNAIAPGFIESPMT-HVLTDEQKSAILAQIPLARYGRDADIAHAVSFLASDAAGYITGHT  238
            +N+IAPG+I++ +T  ++ DE++ AI+  IPL+R G   D+A+A  FLASD ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  239  LDINGGM  245
            LD+NGGM
Sbjct  283  LDVNGGM  289

133) M493_17165 in NC_022080


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  157 bits (580),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 109/246 (45%), Positives = 181/246 (74%), Gaps = 4/246 (1%)

Query  4    LDDRVAIVTGSGSKRGIGRTIALTLAKQGAIVVVADLNWDGVQETVNAITEAGGKALGVE  63
            L++++AI+TG++S RGIGR+ A+T+A++GA VV+ DL+  + +++  ++ E+    LG+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGLA  102

Query  64   LDVTSKQSNEAMVEKVLETYGRIDILVNNAGISQKVTVEDMQLEDMVRIFNVNMFGLFLC  123
             +V+        V  ++E +GRID+LVNNAGI+Q +   D++  D  ++++V++ G +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  TQAVLGQMKKQKYGRIINVSSVSAKRGGGIFGGAHYSASKAAVLGFSKNLAREVALDGIT  183
            +QAV+  M+ Q  G I+ +SSVSA+RGGGIFGG+HYSA+KA+VLG++K +ARE + D I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  184  VNCVAPGLIDTDIWKSLPEEQAKE-VIAGIPMGRPGQTeeiaaaiaflaseeasYITGEE  242
            +N +APGLI+TDI  +L +++ ++ +I GIP+GR G ++++A A  FLAS+ +SY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  243  IDINGG  248
            +D+NGG
Sbjct  283  LDVNGG  288

134) yxbG in NC_020210


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  157 bits (580),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 108/252 (43%), Positives = 180/252 (72%), Gaps = 9/252 (3%)

Query  1    MRLNGKSAIVTGGGS--GIGRATAVRFAEEGAKVAVSDIDEAGGEETVRRIREKGGEAIF  58
            M L+GK AI+TG++S  GIGRATAV FA++GA+V + D+DE+++ ++   +   G   + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VKADVSDSGQVKQLVQTAVEAFGGLHILFNNAGIGHSEVRSTDLSEEEWDRVIDVNLKGV  118
            + A+V+D +QVKQ V T +E FG +++L NNAGI ++ +++ D+   + D+V+DV+L+G 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLGIKYAVPALKESGGGAIVNTSSLLGIKGKK-YESA-YNASKAGVILLTKNAALEYGKF  176
            +L  +  +P+++  G+G+IV  SS+ + +G   + ++ Y+A+KAGV+ L K  A E+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAIAPGVIDTNIITPWKQDARKWPIISKANALGRIGTPEEVANAVLFLVSDEASFI  236
            +IR+N+IAPG+I+T+I     QD R+ +II  + +LGR+G++++VANA LFL SD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAII-EGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  TGATLSVDGGGL  248
            TG TL V+GG L
Sbjct  279  TGITLDVNGGML  290

135) Ilyop_1509 in NC_014632


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  157 bits (579),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 175/251 (70%), Gaps = 9/251 (3%)

Query  4    LKGKVAVITGSA--RGIGRAVAEKLAQAGANLVITDILAEIGEKTAKEISEKYGIEAIFV  61
            L+GK+A+ITG+A  RGIGRA A  +AQ GA +VI D+    +E +A++ +   G   + +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL----DESAARDAAATLGEGHLGL  101

Query  62   PGNVVSSESMAELASKTLEKFGKIDILVNNAGITRDTLFMRMKEEDFDLVMNINLKGTYN  121
            ++NV     + +  +  +E FG+ID+LVNNAGIT+    + ++  D+D V++++L+GT  
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  CTQAFFKTMVKQRFGSIINMASVVGLMGNA--GQVNYSASKAGMIGMTKSLAKEVGKRGV  179
             +QA + TM  Q  GSI+ M+SV +  G +  G  +YSA+KAG++G+ K++A+E G   +
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  RVNAVAPGYIQSEMTDVLSEDVKKE-FAKNIPMGSMGTPEDIANAVLFLSSDLSSYITGQ  238
            R+N++APG I++++T+ L +D +++ +   IP+G +G+++D+ANA LFL+SDLSSY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLSVNGGMLMP  249
            TL VNGGML+ 
Sbjct  282  TLDVNGGMLIH  292

136) CCALI_00238 in NC_021487


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  157 bits (578),  Expect = 5e-40, Method: Compositional matrix adjust.
 Identities = 109/250 (44%), Positives = 181/250 (73%), Gaps = 9/250 (3%)

Query  1    MKLQNRVAIVTGAS--RGIGKAIALELAAEGAKVVINYNRNAASAEETARVLLESGKEAF  58
            M LQ ++AI+TGA+  RGIG+A A+ +A +GA+VVI  + + ++A ++A  L   G   +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATL---GEGHL  99

Query  59   AFQADVADASQVEKLVQSTIERFGRVDILINNAGVTRDKLVMRMSEEDWDAVLNTNLKGA  118
            ++ A+VAD SQV + V + IE+FGR+D+L+NNAG+T+    + +   D D VL+ +L+G+
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCSRAVTPIFLRQRSGVIVNISSVIGKVGGP--GQANYSASKAGLIGLTKSLAKELGSR  176
            +L S+AV P    Q SG IV +SSV ++ GG   G ++YSA+KAG++GL K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAIAPGFIETEMTDVLKPEQ-REAALKQIPLARFGGSREVARVAVFLCSDDASYIH  235
            +IR+N+IAPG+I+T++T+ L  ++ R+A +  IPL+R+G++++VA  A+FL SD +SY+ 
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GEVITVDGGL  245
            G  + V+GG+
Sbjct  280  GITLDVNGGM  289

137) ZPR_2378 in NC_014041


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 108/252 (43%), Positives = 177/252 (71%), Gaps = 9/252 (3%)

Query  1    MKLLEGKNAIVTGGS--RGIGRGIAKVFAAHGANVAFTYNSSEEAAKELEQELSESGVKA  58
            + LL+GK AI+TG++  RGIGR+ A  FA HGA V +  +  E AA++    L+E+ +  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATLGEGHL--  99

Query  59   KGYKSNAADFEQAQELIKNVAEDFGAIDILVNNAGITKDNLLMRMSEEDFDRVIEVNLKS  118
             G  +N AD  Q ++ +  + E+FG ID+LVNNAGIT+    + +   D+D+V++V+L++
Sbjct  100  -GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  IFNMTKAVQRTMLKQRKGSIINMSSVVGVKGNA--GQANYAASKAGIIGFSKSMALELGS  176
             + M++AV  TM  Q  GSI+ MSSV + +G +  G ++Y+A+KAG++G++K+MA E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RNIRTNVIAPGFIETEMTEKL-DEKVVQGWRDNIPLKRGGTPEDIANACVYLGSDLSAYV  235
             +IR N IAPG+I+T++T  L ++   ++  + IPL R G+++D+ANA ++L+SDLS+Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVLNVDGGML  247
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

138) Palpr_0380 in NC_014734


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  156 bits (577),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 112/253 (45%), Positives = 180/253 (72%), Gaps = 13/253 (5%)

Query  1    MKLLEGKVAIVTGAA--RGIGKAIALKLASEGAAIAFTDLNIDENALNTQKEIEALGVKA  58
            + LL+GK+AI+TGAA  RGIG+A A+ +A +GA + +  L++DE+A  ++    +LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI--LDLDESA--ARDAAATLGEGH  98

Query  59   KGYASNAANFDETHTVVAEIAKEFGRIDVLVNNAGITKDGLMMRMSEGQWDAVINVNLKS  118
             G A+N A+  +    VA I  +FGRIDVLVNNAGIT+    + +  G+ D V++V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNFIHAVTPIMMKQKAGSIINMSSVVGVSGNA--GQSNYSASKAGMIGLAKSVAKELGS  176
            ++   +AV P M  Q +GSI+ MSSV +  G +  G ++YSA+KAG++GL+K++A+E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGIRANAIAPGFIETEMTHALTEEQRAKWN---ETIPLRRGGSPDEVAKVTLFLASDLSS  233
              IR N+IAPG+I+T++T +L +++R  ++   E IPL R G++++VA+ +LFLASDLSS
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDER--RHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  234  YVSGQVINVCGGM  246
            Y++G  ++V GGM
Sbjct  277  YLTGITLDVNGGM  289

139) KTR9_1095 in NC_018581


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  155 bits (570),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 111/253 (44%), Positives = 172/253 (68%), Gaps = 10/253 (3%)

Query  5    RTAIVTGAASETGLGRATAARYAEDGWAVVVLDLDGEASAKVAAEIGNAYDVPAFGTAID  64
            + AI+TGAASE G+GRATA  +A++G  VV+LDLD  A+   AA +G++     +G A +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----LGLAAN  104

Query  65   VADESSVTRAHTAIAAEVASGALPAVGALANIAGITSPVPFLETTLDLWNRVMAVNATGT  124
            VADES V +A ++I  + +      ++ L N AGIT P+  L+   +  ++V+ V+  GT
Sbjct  105  VADESQVKQAVATIIEHFGR-----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  125  YLVTKAFLPDMIDNGWGRIVNMSSVSAERGGGVFGKVPYSSAKAAVLGFTKSLARELGDC  184
             L+++A +P M  +G G IV MSSVSA+RGGG+FG   YS+AKA+VLG+ K++ARE+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  185  GVTVNAVAPGAADTAIRVG-STAEQEAAIAASIPLGRVATTREVASVITFLSSEDAAYLT  243
             + +N++APG  +T I  G    E+  AI  +IPLGR++++++VA+   FL+S+ ++YLT
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  244  GTTIDINGGSHMH  256
            G T+D+NGG  +H
Sbjct  280  GITLDVNGGMLIH  292

140) fabG in NC_021351


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 173/247 (71%), Gaps = 8/247 (3%)

Query  3    LLNGQVAIVTGGS--QGIGREIGQVFAEQGATVVISDINEQGAEAAAKELRDAGFNAKSI  60
            LL+G++AI+TG++  +GIGR  +  FA++GA VVI D++E +A  AA  L ++ +   ++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GL  101

Query  61   KCDVTEAADVENLVSQTMNEFGRLDVMVNNAGITRDATMRKMTIEEFNQVIQVHLLGCWL  120
              +V++ ++V + V+  +++FGR+DV+VNNAGIT+      +   ++++V++V L G  L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  121  GTKTAADYMREQGSGSIVNLSSISGKVGN--IGQTNYAAAKAGIVGLTKSAAKEVGFKGV  178
             +++    MR QGSGSIV +SS+S++ G   +G  +Y+AAKAG++GL K+ A+E G   +
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  179  RVNAIQPGLIKTAMTAA-MPADIFAAREKEIPLGRAGDPRDIANAALFLGSELSSYITGV  237
            R+N+I PGLI T +T++ M  +   A    IPLGR G ++D+ANAALFL+S+LSSY+TG+
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  238  VLEVAGG  244
             L+V GG
Sbjct  282  TLDVNGG  288

141) fabG in NC_021352


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 173/247 (71%), Gaps = 8/247 (3%)

Query  3    LLNGQVAIVTGGS--QGIGREIGQVFAEQGATVVISDINEQGAEAAAKELRDAGFNAKSI  60
            LL+G++AI+TG++  +GIGR  +  FA++GA VVI D++E +A  AA  L ++ +   ++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GL  101

Query  61   KCDVTEAADVENLVSQTMNEFGRLDVMVNNAGITRDATMRKMTIEEFNQVIQVHLLGCWL  120
              +V++ ++V + V+  +++FGR+DV+VNNAGIT+      +   ++++V++V L G  L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  121  GTKTAADYMREQGSGSIVNLSSISGKVGN--IGQTNYAAAKAGIVGLTKSAAKEVGFKGV  178
             +++    MR QGSGSIV +SS+S++ G   +G  +Y+AAKAG++GL K+ A+E G   +
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  179  RVNAIQPGLIKTAMTAA-MPADIFAAREKEIPLGRAGDPRDIANAALFLGSELSSYITGV  237
            R+N+I PGLI T +T++ M  +   A    IPLGR G ++D+ANAALFL+S+LSSY+TG+
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  238  VLEVAGG  244
             L+V GG
Sbjct  282  TLDVNGG  288

142) M493_08660 in NC_022080


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 179/252 (72%), Gaps = 9/252 (3%)

Query  1    MRLNGKAAIVTGGGS--GIGRATAVRFAEEGAKVAVSDIDEAGGEETVRRIREKGGEAIF  58
            M L+GK AI+TG++S  GIGRATAV FA++GA+V + D+DE+++ ++   +   G   + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VKADVSDSGQMKRLVQTAVAAFGGLHILFNNAGIGHSEVRSTDLSEEEWDRVIDVNLKGV  118
            + A+V+D +Q+K+ V T +  FG +++L NNAGI ++ +++ D+   + D+V+DV+L+G 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLGIKYAVPALKESGGGAIVNTSSLLGIKGKKY--ESAYNASKAGVILLTKNAALEYGKF  176
            +L  +  +P+++  G+G+IV  SS+ + +G      + Y+A+KAGV+ L K  A E+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAIAPGVIDTNIIAPWKQDARKWPIISKANALGRIGTPEEVANAVLFLASDEASFI  236
            +IR+N+IAPG+I+T+I +   QD R+ +II  + +LGR+G++++VANA LFLASD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAII-EGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  TGATLSVDGGGL  248
            TG TL V+GG L
Sbjct  279  TGITLDVNGGML  290

143) fabG in NC_013891


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  155 bits (570),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 175/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAEEGANIFFNYNGSPDAAEETAKLVAAHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L  +H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVTRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTEMTDKL-DEKTKETMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I T++T+ L ++  +++++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

144) BDI_1496 in NC_009615


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  154 bits (569),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 116/251 (47%), Positives = 176/251 (71%), Gaps = 9/251 (3%)

Query  1    MKLLEGKVAVVTGAA--RGIGKAIALKFAQEGANIAFTDLVIDENGLATQAEIEALGVKA  58
            + LL+GK+A++TGAA  RGIG+A A+ FAQ+GA + + DL  DE+  A++    +LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DES--AARDAAATLGEGH  98

Query  59   KGYASNAANFEETHNVVAEIVKDFGRIDILVNNAGITKDGLMMRMSEGQWDAVLNVNLKS  118
             G A+N A+  +  + VA I+ +FGRID+LVNNAGIT+    + +  G+ D VL+V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNFIHACTPVMMKQRAGSIINMSSVVGVHGNA--GQANYSASKAGMIGLAKSVAQELGS  176
            ++   +A  P M  Q +GSI+ MSSV + +G +  G ++YSA+KAG++GL+K++A+E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGIRANAIAPGFIITDMTAQL-SDEVRAEWCKKIPLRRGGTVEDVANIATFLASDMSSYV  235
              IR N+IAPG+I TD+T+ L  DE R      IPL R G+ +DVAN A FLASD+SSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  SGQVIQVDGGM  246
            +G  ++V+GGM
Sbjct  279  TGITLDVNGGM  289

145) Clole_3051 in NC_015275


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  154 bits (568),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 173/252 (69%), Gaps = 14/252 (5%)

Query  1    MLKDKVAVITGSV--RGIGRAIAMCFAKQGANVVI-NYSSEKRKEEADQVVTEIKALGGK  57
            +L++K+A+ITG+   RGIGRA A+ FA++GA VVI +      ++ A        +LG  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA-------TLGEG  97

Query  58   AIALCANVANSEEAKGLIEGTIAAFGKIDILVNNAGITKDMLLLRMTEKEFQEVLDVNLK  117
             ++L ANVA+  + K  +   I  FG+ID+LVNNAGIT+ +  L +   +++ VLDV+L+
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  118  GVFNCSKHGAKAMMKTG-GSIINMTSVVGINGNA--GQSNYAASKAGVIGFTKSVAKEFA  174
            G +  S+    +M   G GSI+ M+SV +  G +  G ++Y+A+KAGV+G+ K++A+EF+
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  175  GKNIRVNAIAPGFITTDMT-DILPERVKESVMTSIPMKCFGVSEEIANVAVFLASDLSSY  233
              +IR+N+IAPG+I TD+T +++ +  +++++ +IP+  +G ++++AN A+FLASDLSSY
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  234  ITGEVIKVDGGM  245
            +TG  + V+GGM
Sbjct  278  LTGITLDVNGGM  289

146) AL1_05010 in NC_021030


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  154 bits (567),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 113/251 (46%), Positives = 172/251 (69%), Gaps = 9/251 (3%)

Query  1    MKLLDGKVAVVTGAA--RGIGKAIALEFAKEGANVAFTDLAIDENGKATEAEIAALGVKA  58
            + LL+GK+A++TGAA  RGIG+A A+ FA++GA V + DL    +  A+    A+LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL----DESAARDAAATLGEGH  98

Query  59   KGYASNAANFEETHAVIDQIIKDFGRIDILVNNAGITKDGLMMRMSEAQWDAVLTVNLKS  118
             G A+N A+  +    +  II +FGRID+LVNNAGIT+    + +  ++ D VL V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNFIHAVVPVMARQKSGSIINMSSVVGVSGNA--GQCNYSASKAGMIGLAKSIAKEMGP  176
            ++   +AV+P M  Q SGSI+ MSSV +  G +  G  +YSA+KAG++GL+K++A+E GP
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGIRANAIAPGFIMTEMTDKL-PDEVKEGWYKQIPLRRGGTPEDVAKVALFLASDLSSYV  235
              IR N+IAPG+I T++T+ L  DE +++    IPL R G+++DVA+ ALFLASDLSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  SGQVIHCCGAM  246
            +G  ++  G+M
Sbjct  279  TGITLDVNGGM  289

147) fabG in NC_016011


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  154 bits (567),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 175/253 (70%), Gaps = 11/253 (4%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPDAAEETAKLVAEH-GVEV  57
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  58   EIVKANVAISEDVDAFFKQAIERFGRIDILVNNAGVTRDNLLMRMKEEEWDDVININLKG  117
            ++   +  + + V ++    IE+FGRID+LVNNAG+T+    + ++  + D V++++L+G
Sbjct  104  NVADES-QVKQAVATI----IEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  118  TFLCTKAVTRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAP  175
            T+L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RGINVNAIAPGFITTEMTDKL-DDKTKEAMLAQIPLGEYGTTEDIANAVLFLASDAAKYI  234
              I +N+IAPG+I T++T+ L +D  ++A++  IPLG  G+++D+ANA LFLASD + Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQTLSVDGGMVM  247
            TG TL V+GGM++
Sbjct  279  TGITLDVNGGMLI  291

148) Clos_0257 in NC_009922


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 166/249 (67%), Gaps = 8/249 (3%)

Query  1    MRLDGKVAVVTGSTS--GIGKATIVRFAEEGAKVVVWGITEAEVNPVVAELEEKGAEVLG  58
            M L+GK+A++TG++S  GIG+AT V FA++GA+VV+ ++ E+      A L   G   LG
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VVANVTDYEEVNRTMDQIKEHFGKIDIIVNNAGITADAQILKMTEEQFDKVISVNLKGVF  118
            + ANV+D  +V++++  I EHFG+ID++VNNAGIT   + L +   ++DKV+ V+L+G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NTGQAAAKIMAEQGFGVILSTSSVVGLYGN--FGQTNYAATKFAVIGMTKTWAKELGRKG  176
              +QA    M  QG G I+  SSV +  G   FG  +Y+A+K +V+G+ K+ A+E+G   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRANAVAPGFIATEMTAK-MPENVLTMMKEKSPLKALGEPRDIANAFLFLASDEAKYISG  235
            +R N++APG+I T++T+  M ++    + E  PL  LG ++D+ANA LFLASD + Y++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  AVLSVDGAV  244
              L V+G++
Sbjct  281  ITLDVNGGM  289

149) lin1921 in NC_003212


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 108/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRIDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGRID+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTEMTDKL-DDKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I T++T+ L +D  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

150) LMRG_00954 in NC_017544


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

151) fabG in NC_003210


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

152) LMKG_00531 in NC_017546


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

153) fabG in NC_011660


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGDYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

154) BN418_2172 in NC_020557


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

155) fabG in NC_017537


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGDYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

156) BN419_2171 in NC_020558


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

157) fabG in NC_017529


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGDYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

158) fabG in NC_018588


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

159) fabG in NC_018589


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

160) fabG in NC_018592


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

161) MUO_09280 in NC_017728


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

162) LM5923_1960 in NC_013768


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

163) fabG in NC_018584


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

164) fabG in NC_012488


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

165) LMLG_2050 in NC_017547


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

166) LMOG_01433 in NC_017545


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

167) LM220_09020 in NC_021830


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

168) LM1816_11202 in NC_021829


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

169) fabG in NC_018642


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

170) fabG in NC_018587


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

171) fabG in NC_002973


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

172) fabG in NC_019556


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

173) fabG in NC_018591


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

174) fabG in NC_018590


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

175) fabG in NC_018585


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

176) fabG in NC_018586


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

177) fabG in NC_018593


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

178) M642_07130 in NC_021823


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

179) M640_08140 in NC_021839


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

180) M644_06780 in NC_021827


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

181) M645_14820 in NC_021840


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

182) M639_08140 in NC_021837


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

183) M637_12155 in NC_021824


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

184) M638_11900 in NC_021825


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

185) M643_04360 in NC_021826


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

186) M641_12920 in NC_021838


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

187) LM5578_2009 in NC_013766


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGGS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVE  58
            M LQGK+A++TG++  RGIGR  A+ +A++GA + +   + + A + +A L   H     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTDMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I TD+T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

188) Pnuc_0214 in NC_009379


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  153 bits (563),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 107/244 (44%), Positives = 177/244 (73%), Gaps = 6/244 (2%)

Query  6    LKDKIAIVTGAA--KGIGFATALRFAQEGAKVMIADINLEAVKGAAAKIPNAE-AYAMNV  62
            L++KIAI+TGAA  +GIG ATA+ FAQ+GA+V+I D++  A ++AAA + +++ + A NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  63   TDRASIQATVGEIMQRHGRIDILINNAGITQDARLIKMTEAQFDTVIDVNLKGVFNCTQL  122
            +D + ++ +V+ I+++ GRID+L+NNAGITQ  + + +  +++D V+DV+L+G +  +Q 
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  123  VVPHMLEAGSGAIVNASSVVGLYGN--FGQTNYSATKFGVIGFTKTWARELGPKGIRVNA  180
            V+P M   GSG+IV  SSV +  G   FG  +YSA+K GV+G+ K+ ARE+GP  IR+N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  181  VCPGFIATEMVKA-MPENILQDIERRSWLGRLGTPEEMANVYLFLASDEASYVNGVALEA  239
            + PG+I T++  + M ++  + I     LGRLG+++++AN  LFLASD +SY+ G++L+ 
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  240  SGGI  243
            +GG+
Sbjct  286  NGGM  289

189) Arth_3954 in NC_008541


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 112/253 (45%), Positives = 171/253 (68%), Gaps = 10/253 (3%)

Query  7    RTAVLTGATSDRGIGITTARRYANQGWAVVILDLDGEKSAKVAAEIGNEFNVPAFGHEID  66
            + A++TGA+S+RGIG +TA  +A++G  VVILDLD   +   AA +G+      +G   +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HLGLAAN  104

Query  67   VANEGSvnaayaavaaevaaGNLPPVGALANIAGITSPVPFLETTLELWHKVMDVNATGT  126
            VA+E+ V+ A A++       ++  ++ L N AGIT P+  L+      +KV+DV+  GT
Sbjct  105  VADESQVKQAVATII-----EHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  127  YLVTKAFLPDMIASGWGRIVNMSSVSAQRGGGVFGKVPYSAAKAAILGFTKALAREIGAT  186
             L+++A +P M A G G IV MSSVSAQRGGG+FG   YSAAKA++LG+ KA+ARE+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  187  GVTVNAITPGAVDTNIRVG-STEEQEAAINAGIPLGRNATTEEIAAVITFLSSEESAYLT  245
             + +N+I+PG ++T+I  G   +E+  AI  GIPLGR ++++++A    FL+S+ S+YLT
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  246  GTTIDINGGSHIH  258
            G T+D+NGG  IH
Sbjct  280  GITLDVNGGMLIH  292

190) Krodi_2550 in NC_015496


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (562),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 111/255 (44%), Positives = 176/255 (70%), Gaps = 15/255 (5%)

Query  1    MKLLEGKTAIITGAS--RGIGKGIAEVFAQHGANVAFTYSSSSAAADELEKSLESTGVKI  58
            + LL+GK AIITGA+  RGIG++ A  FAQHGA V +      +AA +   +L    +  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATLGEGHL--  99

Query  59   KGYKSNAADFEQAQELVKNVLEDFGTIDILVNNAGITKDNLLMRMSEEDFDNVIEVNLKS  118
             G  +N AD  Q ++ V  ++E+FG ID+LVNNAGIT+    + +   D+D+V++V+L++
Sbjct  100  -GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  IFNMTKAVQRTMLKARKGSIINMSSVVGVKGNA--GQANYAASKAGMIGFSKSMALELGS  176
             + M++AV  TM     GSI+ MSSV + +G +  G ++Y+A+KAG++G++K+MA E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RNIRTNVIAPGFIETEMTGKLDEATVDGWRQS----IPLKRGGSPEDIANACVFLASDMS  232
             +IR N IAPG+I+T++TG L +   D +R++    IPL R G+++D+ANA +FLASD+S
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQ---DERRHAIIEGIPLGRLGAAQDVANAALFLASDLS  275

Query  233  AYITGQVINVDGGML  247
            +Y+TG  ++V+GGML
Sbjct  276  SYLTGITLDVNGGML  290

191) Mycsm_02092 in NC_019966


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 107/248 (44%), Positives = 172/248 (70%), Gaps = 7/248 (2%)

Query  1    MSLLTGQTAVVTGGA--QGLGYAIAEQFIAEGARVVLGDLDLGATEAAAKQLGGDDVALA  58
            + LL G+ A++TG+A  +G+G A A  F  +GARVV+ DLD +A+  AA  LG ++++LA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   VRCDVTRTDEVDALVAAAIEHFGGLDIMVNNAGITRDATLRKMTEDQFDQVIAVHLKGTW  118
               +V+   +V   VA+ IEHFG +D++VNNAGIT+      +  +++D+V+ V L+GT 
Sbjct  103  A--NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NGTKAAAGIMRENKRGAIVNMSSISGK--VGLIGQTNYSAAKAGIVGMTKAAAKELAHLG  176
              ++A    MR +  G+IV MSS+S++   G++G  +YSAAKAG++G+ KA A+E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAIQPGLIRSAMTEAMPQHIWDQKLAE-VPMGRAGEPSEVAKVALFLASDLSSYMTG  235
            +R+N+I PGLI++ +T ++ Q+ + + + E +P+GR G + +VA+ ALFLASDLSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  TVLEVTGG  243
              L+V GG
Sbjct  281  ITLDVNGG  288

192) AAur_1105 in NC_008711


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (562),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 105/249 (43%), Positives = 174/249 (70%), Gaps = 6/249 (2%)

Query  7    RTAIVTGAVSERGIGRATVNYLAAQGWNIGIIDLddaackiaakeiaaeYGVQAH-GVGA  65
            + AI+TGA SERGIGRAT   +A +G  + I+DLD++A + AA  ++     ++H G++A
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-----EGHLGLAA  103

Query  66   NVASEAEVRAAIDELEAELPQIVALANVAGVSSPVGYLELEPAEWDRVLNINLNGVHYAT  125
            NVA E++V+ A+  +  ++ +I  L N AG++ P+  L++ P++ D+VL+++L G    +
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  126  RRVTESMVKNRIGRIVNISSVSAQRGGGTFSKTPYSVAKAGVIGLTRATARELGEYDITV  185
            + V  +M  +  G IV +SSVSAQRGGG F+   YS AKAGV+GL +A ARE+G  +I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  186  NAISPGPIDTDIMGGTLSQERKDELTKDLVVNRVGSTRDIAAAIAFLISEDSGYISGQTL  245
            N+I+PG I+TDI GG + +ER++ +  ++ + R+G+++D+A A  FL S+ S+Y++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  246  NVDGGLYMH  254
            +V+GG+ +H
Sbjct  284  DVNGGMLIH  292

193) ARUE_c10580 in NC_018531


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 105/249 (43%), Positives = 174/249 (70%), Gaps = 6/249 (2%)

Query  7    RTAIVTGAVSERGIGRATVNYLAAQGWNIGIIDLddaackiaakeiaaeYGVQAH-GVGA  65
            + AI+TGA SERGIGRAT   +A +G  + I+DLD++A + AA  ++     ++H G++A
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-----EGHLGLAA  103

Query  66   NVASEAEVRAAIDELEAELPQIVALANVAGVSSPVGYLELEPAEWDRVLNINLNGVHYAT  125
            NVA E++V+ A+  +  ++ +I  L N AG++ P+  L++ P++ D+VL+++L G    +
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  126  RRVAESMVKNRIGRIVNISSVSAQRGGGTFSKTPYSVAKAGVIGLTRATARELGEYDITV  185
            + V  +M  +  G IV +SSVSAQRGGG F+   YS AKAGV+GL +A ARE+G  +I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  186  NAISPGPIDTDIMGGTLSQERKDELTKDLVVNRVGSTRDIAAAIAFLISEDSGYISGQTL  245
            N+I+PG I+TDI GG + +ER++ +  ++ + R+G+++D+A A  FL S+ S+Y++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  246  NVDGGLYMH  254
            +V+GG+ +H
Sbjct  284  DVNGGMLIH  292

194) Tola_2192 in NC_012691


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 103/248 (42%), Positives = 173/248 (70%), Gaps = 5/248 (2%)

Query  1    MNFQGKVVLVTGAT--RGIGKAIAQTFVSRGATVVGTATSESGAAAISEYLGEAGTGLVL  58
            M +QGK+ ++TGA+  RGIG+A A TF  +GA VV     ES+A   +  LGE+  GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTEQASIDALFAAIKAKYGEVDILVNNAGITRDNLLMRMKDDEWDDIIQTNLSSVYRLS  118
            NV++++ +    A+I   +G +D+LVNNAGIT+    + ++ ++ D +++ +L +   +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRSMMKKRHGRIISIGSVVGTMGNA--GQTNYAAAKAGLLGFTKSLAREVGSRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAG+LG+ K++ARE G+  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NAVAPGFIETDMT-HVLNDEQRNGILSQVPAGRLGSAQEIASAVAFLASDEAAYITGETL  235
            N++APG+I+TD+T  +++DE+R++I+  +P GRLG+AQ++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGMYM  243
            +VNGGM +
Sbjct  284  DVNGGMLI  291

195) Alfi_3068 in NC_018011


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 111/251 (45%), Positives = 172/251 (69%), Gaps = 9/251 (3%)

Query  1    MKLLEGKVAVVTGAA--RGIGKAIALEFAKEGADVAFTDLVIDDNGKATEAEIAALGVKA  58
            + LL+GK+A++TGAA  RGIG+A A+ FA++GA V + DL    +  A+    A+LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL----DESAARDAAATLGEGH  98

Query  59   KGYASNAANFEETHKVIEEIVKDFGRIDILVNNAGITKDGLMMRMSEAQWDAVLTVNLKS  118
             G A+N A+  +  + +  I+ +FGRID+LVNNAGIT+    + +  ++ D VL V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNFIHAVTPVMARQKGGSIINMSSVVGVSGNA--GQCNYSASKAGMIGLAKSIAKEMGP  176
            ++   +AV P M  Q +GSI+ MSSV +  G +  G  +YSA+KAG++GL+K++A+E GP
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGIRANAIAPGFIMTEMTDKL-PDEVKEGWYKQIPLRRGGTPEDVAKVALFLASDLSSYV  235
              IR N+IAPG+I T++T+ L  DE +++    IPL R G+++DVA+ ALFLASDLSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  SGQVIHCCGAM  246
            +G  ++  G+M
Sbjct  279  TGITLDVNGGM  289

196) NT01EI_2369 in NC_012779


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 104/246 (43%), Positives = 174/246 (71%), Gaps = 5/246 (2%)

Query  1    MSLEGKIALVTGAS--RGIGRAIAETLAARGARVIGTATSDKGAEAISAYLGDNGMGMAL  58
            M L+GKIA++TGA+  RGIGRA A T+A +GARV+     + +A   +A LG+  +G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASIDSMLERVRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + +   +  +  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDEQRSGILAAVPAARLGDAKEIAYAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  DE+R +I+ ++P +RLG A+++A A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

197) fabG in NC_006510


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 171/252 (68%), Gaps = 11/252 (4%)

Query  1    MLEGKIALVTGAS--RGIGRAVALELARQGANVAV-NYAGSEAKANEVVEAIRSLGREAI  57
            +L+GKIA++TGA+  RGIGRA A+ +A++GA V + +   S A+     +A  +LG   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQADVARAEDVERMVKTTIDHFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGV  117
            ++ A+VA   +V + V T I+HFGR+D+LVNNAGIT+    + ++  + D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAATRPMMKQRYGRIVNIASVVGVIGNP--GQANYVAAKAGVIGLTKTAAREFASR  175
            +L ++A    M  Q  G IV ++SV +  G    G ++Y AAKAGV+GL K+ AREF++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFITTDMTEAL-SPELKAEMLKQIPLARFGEPDDVARVVAFLASDAASYMT  234
            +I +N++APG+I TD+T +L   E +  ++  IPL+R+G ++DVA    FLASD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

198) GTNG_1527 in NC_009328


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 178/252 (71%), Gaps = 9/252 (3%)

Query  1    MRLNGKAAIVTGGAS--GIGRATAVRFAAEGAKVAVSDIDEVGGEETVRLIRERGGEAIF  58
            M L+GK AI+TG+AS  GIGRATAV FA +GA+V + D+DE ++ ++   +   G   + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VKTDVSDSKGVNDLVQTTVNAFGGLHILFNNAGIGHSEVRSTDLSEEEWDRVIDVNLKGV  118
            + ++V+D   V++ V T ++ FG +++L NNAGI ++ +++ D+   + D+V+DV+L+G 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLGIKYAVPAMKTSGGGAIVNTSSLLGMKGKK-YESA-YNASKAGVILLTKNAALEYGKF  176
            +L  +  +P+M++ G+G+IV  SS+ + +G   + ++ Y+A+KAGV+ L K  A E+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAVAPGVIDTNIITPWKQDARKWPIISKANALGRIGTPEEVANAVLFLASDEASFI  236
            +IR+N++APG+I+T+I     QD R+ +II  + +LGR+G++++VANA LFLASD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAII-EGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  TGATLSVDGGGL  248
            TG TL V+GG L
Sbjct  279  TGITLDVNGGML  290

199) GYMC52_1645 in NC_014915


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 180/252 (72%), Gaps = 9/252 (3%)

Query  1    MRLKGKAAIVTGGAS--GIGRATAIRFAEEGAKVAVSDINEEGGEETVRLIREKGGEAIF  58
            M L+GK AI+TG+AS  GIGRATA+ FA++GA+V + D++E ++ ++   +   G   + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VQTDVADSKQVSRLVQTAVDAFGGLHILFNNAGIGHSEVRSTDLSEEEWDRVINVNLKGV  118
            + ++VAD  QV + V T ++ FG +++L NNAGI ++ +++ D+   + D+V++V+L+G 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLGIKYAVPALKASGGGAIVNTASLLGLKGKK-YQAA-YNASKAGVILLTQNAALEYGKF  176
            +L  +  +P+++A G+G+IV  +S+ + +G   + ++ Y+A+KAGV+ L +  A E+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAIAPGVIDTNIITPWKQDERKWPIISKANALGRIGTPEEVANAVLFLASDEASFI  236
            +IR+N+IAPG+I+T+I     QDER+ +II  + +LGR+G++++VANA LFLASD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAII-EGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  TGATLSVDGGGL  248
            TG TL V+GG L
Sbjct  279  TGITLDVNGGML  290

200) GYMC61_2515 in NC_013411


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 180/252 (72%), Gaps = 9/252 (3%)

Query  1    MRLKGKAAIVTGGAS--GIGRATAIRFAEEGAKVAVSDINEEGGEETVRLIREKGGEAIF  58
            M L+GK AI+TG+AS  GIGRATA+ FA++GA+V + D++E ++ ++   +   G   + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VQTDVADSKQVSRLVQTAVDAFGGLHILFNNAGIGHSEVRSTDLSEEEWDRVINVNLKGV  118
            + ++VAD  QV + V T ++ FG +++L NNAGI ++ +++ D+   + D+V++V+L+G 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLGIKYAVPALKASGGGAIVNTASLLGLKGKK-YQAA-YNASKAGVILLTQNAALEYGKF  176
            +L  +  +P+++A G+G+IV  +S+ + +G   + ++ Y+A+KAGV+ L +  A E+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAIAPGVIDTNIITPWKQDERKWPIISKANALGRIGTPEEVANAVLFLASDEASFI  236
            +IR+N+IAPG+I+T+I     QDER+ +II  + +LGR+G++++VANA LFLASD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAII-EGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  TGATLSVDGGGL  248
            TG TL V+GG L
Sbjct  279  TGITLDVNGGML  290

201) FP0964 in NC_009613


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (562),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 113/252 (45%), Positives = 177/252 (71%), Gaps = 9/252 (3%)

Query  1    MKLLEGKVAIITGAS--RGIGSGIAKVFAQHGANVAFTYSSSVESAMALETELNALGIKA  58
            + LL+GK+AIITGA+  RGIG + A  FAQHGA V +     ++ + A ++   +LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAA-ATLGEGH  98

Query  59   KGYQSNAADFNEAQTFVDAVIAEFGTIDILINNAGITKDNLLMRMSEEDFDKVINVNLKS  118
             G  +N AD ++ +  V ++I +FG ID+L+NNAGIT+    + +   D+DKV++V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFNMTKAIQKTFLKQRSGSIINMSSVVGIKGNP--GQTNYAASKAGVIGFTKSVALELGS  176
             + M++A+  T   Q SGSI+ MSSV + +G    G  +Y+A+KAGV+G+ K++A E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RNIRCNAIAPGFIETEMTAKL-NEEVVQTWRETIPLRRGGTPEDVANACLFLASDLSAYV  235
             +IR N+IAPG+I+T++T+ L ++E  ++  E IPL R G+++DVANA LFLASDLS+Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVLNVDGGML  247
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

202) fabG in NC_008555


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (562),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 175/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLQGKVAVVTGAS--RGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAAEGVEVE  58
            M LQGK+A++TGA+  RGIGR  A+ +A++GA + +   + + A + +A L  ++     
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----L  99

Query  59   AMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGT  118
            ++ ANVA   +V       IE+FGR+D+LVNNAGIT+    + ++ ++ D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVTRTMMKQRAGKIINMASVVGLIGNA--GQANYVASKAGVIGLTKTTARELAPR  176
            +L ++AV  TM  Q +G I+ M+SV +  G +  G ++Y A+KAGV+GL K+ ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GINVNAVAPGFITTEMTDKL-DEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYIT  235
             I +N++APG+I T++T+ L ++  ++A++  IPLG  G+++D+ANA LFLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGMVM  247
            G TL V+GGM++
Sbjct  280  GITLDVNGGMLI  291

203) AZOBR_p410035 in NC_016596


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  152 bits (562),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 178/247 (73%), Gaps = 8/247 (3%)

Query  5    LDGKVALITGAA--QGLGLAMAETFVREGGRVAVVDINGDAAKAVAERLGESAIGIAANV  62
            L+GK+A+ITGAA  +G+G A A TF ++G+RV ++D++  AA+  A  LGE+ +G+AANV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  63   TRMADVEMTIAATVEKFGRLDILVNNAGSTHANGPFENVTEEEFDRVFALNVKSIYLYSK  122
            +  ++V  ++A+ +E FGR+D+LVNNAG T++   ++ +   ++D+V+ +++++  L S+
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD-IRPGDYDKVLDVSLRGTLLMSQ  164

Query  123  AVVATMRAQKSGVILNLGSTAGLRPRP--GLVWYNATKGAVHNITKSLALELAPDNIRVC  180
            AV++TMRAQ SG I+ ++S ++ R     G   Y+A+K++V  + K++A E++PD+IR+ 
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  181  ALAPVATETPLLATFMGGDTPEKRARMMGIVPLGRLGQPTDVANAALYLASDEAAFLTGV  240
            ++AP   +T + + +M     E+R  ++  +PLGRLG + DVANAAL+LASD +++LTG+
Sbjct  225  SIAPGLIHTDITGGLM---QDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  241  VLEIDGG  247
             L+++GG
Sbjct  282  TLDVNGG  288

204) MYSTI_05228 in NC_020126


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 110/251 (44%), Positives = 176/251 (71%), Gaps = 10/251 (3%)

Query  1    MSFKDKVVLVTGGS--RGIGRACAVAFAKAGASTVVISYAGNEAAAQESVALIQAEGAKA  58
            M +++K+ ++TG++  RGIGRA AV+FA+ GA  V++    +E+AA+++ A +   G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAATL---GEGH  98

Query  59   EALRFDVADTAACASAVEGILKAHGRLDVLVNNAGVAVDGLVMRVKDEDWDKQLDTNLKG  118
             +L  +VAD +    AV  I+   GR+DVLVNNAG++     + ++  D DK LD +L+G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFALIRAVSRPMMKQRSGAIVNVTSVVGDMGNG--GQVAYSASKAGLVGLTKSVARELSS  176
            ++ + +AV   M  Q SG+IV ++SV ++ G G  G   YSA+KAG++GL K++ARE+++
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGIRVNAVSPGFIGTDMTSHL-NDDLRQKMLEGIPLGRLGNPEEVAQAVLFLSGDASSYI  235
              IR+N+++PG+I TD+T+ L +D+ R+ ++EGIPLGRLG +++VA+A LFL++D SSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGEVLKVNGGM  246
            TG  L VNGGM
Sbjct  279  TGITLDVNGGM  289

205) Aeqsu_2655 in NC_018013


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 108/255 (43%), Positives = 179/255 (71%), Gaps = 15/255 (5%)

Query  1    MKLLEGKTAIITGGS--RGIGKGIVEIFAQHGANV---AFTYSSSAEAANALADEVSKTG  55
            + LL+GK AIITG++  RGIG++    FAQHGA V    +  S++ +AA +L++  +  G
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLG  100

Query  56   VKAKAYQSDAANYEESQKLIEEVLKDFGSIDILVNNAGITKDNLLMRISEADFDKVIEVN  115
            + A     + A+  + ++ +  ++ +FG ID+LVNNAGIT+    + I  +D+DKV++V+
Sbjct  101  LAA-----NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVS  155

Query  116  LKSVFNMTKAVQRAMLKQRKGSIINMSSVVGVKGNA--GQTNYAASKAGIIGFTKSVALE  173
            L++ + M++AV  +M  Q  GSI+ MSSV + +G +  G  +Y+A+KAG++G+ K++A E
Sbjct  156  LRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE  215

Query  174  LGSRDIRCNAIAPGFIETEMTGKL-DEATVKGWREAIPLKRGGTPEDIANACVFLASDLS  232
            +G+ +IR N+IAPG+I+T++TG L ++    +  E+IPL R G+++D+ANA +FLASDLS
Sbjct  216  FGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLS  275

Query  233  AYVTGQVLNVDGGML  247
            +Y+TG  L+V+GGML
Sbjct  276  SYLTGITLDVNGGML  290

206) GK1683 in NC_006510


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  151 bits (557),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 178/252 (71%), Gaps = 9/252 (3%)

Query  1    MRLKGKAAIVTGGAS--GIGRATAIRFAEEGAKVAVSDINEEGGEETVRLIREKGGEAIF  58
            M L+GK AI+TG+AS  GIGRATA+ FA++GA+V + D++E ++ ++   +   G   + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VQTDVADSKQVSRLVQTAVDAFGGLHILFNNAGIGHSEVRSTDLSEEEWDRVINVNLKGV  118
            + ++VAD  QV + V T ++ FG +++L NNAGI ++ +++ D+   + D+V++V+L+G 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLGIKYAVPVMKQCGGGAIVNTSSLLGIKGKK-YESA-YNASKAGVILLTKNAALEYGKF  176
            +L  +  +P M+  G+G+IV  SS+ + +G   + ++ Y+A+KAGV+ L K  A E+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAIAPGVIDTNIITPWKQDERKWPIISKANALGRIGTPEEVANAVLFLASDEASFI  236
            +IR+N+IAPG+I+T+I     QDER+ +II  + +LGR+G++++VANA LFLASD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAII-EGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  TGATLSVDGGGL  248
            TG TL V+GG L
Sbjct  279  TGITLDVNGGML  290

207) GTCCBUS3UF5_19440 in NC_016593


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  151 bits (557),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 178/252 (71%), Gaps = 9/252 (3%)

Query  1    MRLKGKAAIVTGGAS--GIGRATAIRFAEEGAKVAVSDINEEGGEETVRLIREKGGEAIF  58
            M L+GK AI+TG+AS  GIGRATA+ FA++GA+V + D++E ++ ++   +   G   + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VQTDVADSKQVSRLVQTAVDAFGGLHILFNNAGIGHSEVRSTDLSEEEWDRVINVNLKGV  118
            + ++VAD  QV + V T ++ FG +++L NNAGI ++ +++ D+   + D+V++V+L+G 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLGIKYAVPVMKQCGGGAIVNTSSLLGIKGKK-YESA-YNASKAGVILLTKNAALEYGKF  176
            +L  +  +P M+  G+G+IV  SS+ + +G   + ++ Y+A+KAGV+ L K  A E+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAIAPGVIDTNIITPWKQDERKWPIISKANALGRIGTPEEVANAVLFLASDEASFI  236
            +IR+N+IAPG+I+T+I     QDER+ +II  + +LGR+G++++VANA LFLASD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAII-EGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  TGATLSVDGGGL  248
            TG TL V+GG L
Sbjct  279  TGITLDVNGGML  290

208) B1NLA3E_04220 in NC_021171


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  151 bits (556),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 105/254 (42%), Positives = 174/254 (69%), Gaps = 14/254 (5%)

Query  1    MRLSGKVAIITGAAN--GLGLSAAEIFAREGASVAIADFNEEVGNAKAQELADKGYRVDF  58
            M L GK+AIITGAA+  G+G ++A  FA++GA V I D++E  +   A  L++   ++++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG--HLGL  101

Query  59   FQVDVADQASVNAMVKNVLDTFGRIDILVNNAGITRDAMLAKMTLENFEKVIDVNLTGVF  118
               +VAD++ V+  V  +++ FGRID+LVNNAGIT+      +   +++KV+DV+L G +
Sbjct  102  -AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  LCAQAVVPTMVAQGWGKIINTSSVS-----GVYGNIGQTNYAATKAGVVGMTKTWAKELG  173
            L +QAV+PTM AQG G I+  SSVS     G++G     +Y+A+KAGV+G+ K+ A+E+G
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMAREFG  217

Query  174  RKGIRVNAVVPGFMETSMTATV-PEKILDQLRTTIPLGQLGKPHDIANAYLYLASNESDY  232
               IR+N++ PG+++T +T+ +  +   + +   IPLG+LG ++D+ANA L+LAS+ S Y
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  233  VNGTVLHVDGGIMM  246
            + G  L+V+GG+++
Sbjct  278  LTGITLDVNGGMLI  291

209) GC56T3_1835 in NC_014206


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  151 bits (555),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 179/252 (72%), Gaps = 9/252 (3%)

Query  1    MRLQGKAAIVTGGAS--GIGRATAIRFAEEGAKVAVSDINEEGGEETVHLIREKGGEAIF  58
            M LQGK AI+TG+AS  GIGRATA+ FA++GA+V + D++E ++ ++   +   G   + 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   VQTDVADSKQVSRLVQTAVDVFGGLHILFNNAGIGHSEVRSTDLSEEEWDRVIDVNLKGV  118
            + ++VAD  QV + V T ++ FG +++L NNAGI ++ +++ D+   + D+V+DV+L+G 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLGIKYAVPALKASGGGAIVNTASLLGLKGKK-YQAA-YNASKAGVILLTQNAALEYGKF  176
            +L  +  +P+++A G+G+IV  +S+ + +G   + ++ Y+A+KAGV+ L +  A E+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NIRVNAIAPGVIDTNIITPWKQDERKWPIISKANALGRIGTPEEVANAVMFLASDEASFI  236
            +IR+N+IAPG+I+T+I     QDER+ +II  + +LGR+G++++VANA +FLASD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAII-EGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  TGAILSVDGGGL  248
            TG  L V+GG L
Sbjct  279  TGITLDVNGGML  290

210) fabG in NC_012225


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  151 bits (555),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 161/248 (65%), Gaps = 9/248 (3%)

Query  5    LKNKTAIVTGSS--RGIGKKIAETLAKEGVNVVITATNFEKASQVAEEIKSSFNVETLAL  62
            L+ K AI+TG++  RGIG+  A T+A++G  VVI    ++     A +  +++    L+L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLGL  101

Query  63   QHDAKSSESCKEVIAKTIEKFGSIDILVNNAGITKDMLVLQMEDNAWNDVISTNLSGTFY  122
              +       K+ +A  IE FG ID+LVNNAGIT+ +  L++     + V+  +L GT+ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  MSREAAKSMLRARKGKIINISSVIGKMGNA--GQVNYSAAKAGIIGMTKSMAKEFAPRNI  180
            MS+    +M     G I+ +SSV ++ G +  G  +YSAAKAG++G+ K+MA+EF+P +I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  CVNAIAPGFIQTDMT-GVLPEDTVKGIMSITPLKRLGTPEDVSNLVLFLASDMSSYITGE  239
             +N+IAPG+I+TD+T G++ ++   +I+   PL RLG+++DV+N  LFLASD+SSY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  VIAVDGGM  247
             + V+GGM
Sbjct  282  TLDVNGGM  289

211) fabG in NC_008595


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  150 bits (554),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 115/251 (46%), Positives = 176/251 (71%), Gaps = 16/251 (6%)

Query  5    LLLGKVAVVTGAG--QGIGREIARALHRHGARVVLADLDGSAARSAAAQIDDSGANCTGL  62
            LL GK+A++TGA+  +GIGR  A ++ +HGARVV+ DLD SAAR AAA ++++     GL
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH---LGL  101

Query  63   ACDVTSEEQVGALVAGTVREHGGLDVFVNNAGITRDASLKRMTV--ADFDAVIAVHLRGT  120
            A +V+ E QV   VA  + + G +DV+VNNAGIT+  ++K + +  +D+D V+ V LRGT
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQ--PIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  WLGVREAAAVMRERKTGSIVNMSSLSGKAGNP--GQTNYSAAKAGIVGLTKAAAKELAHH  178
             L  +   + MR + +GSIV MSS+S++ G    G  +YSAAKAG++GL KA A+E++ +
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  179  NVRVNAIQPGLIRTPMTAAMPPDVFAEREA---AVPMKRAGEPEEVAGAVVFLASELSSY  235
            ++R+N+I PGLI+T +T+++  D    R+A   ++P+ R G +++VA A +FLAS+LSSY
Sbjct  220  QIRINSIAPGLIHTDITGGLMQD--ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  236  ITGTVLGVGGG  246
            +TG  L+V GG
Sbjct  278  LTGITLDVNGG  288

212) Noca_4297 in NC_008699


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  150 bits (554),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 103/244 (43%), Positives = 175/244 (72%), Gaps = 4/244 (1%)

Query  4    LDSKIAVVTGAG--QGIGKAIATKLAAEGATVVVTDVDHQAAKETAAALDHGAIGLHADV  61
            L++KIA++TGA+  +GIG+A A  +A +GA VV+ D+D+ AA+++AA+L++G +GL A+V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   TDRTSVDAMVDEVVATFGRIDVLVNNAGWDKGEAFVDSEPETWDRIIGINLYGVLNTSKK  121
            +D + V   V  ++  FGRIDVLVNNAG  +    +D  P   D++++++L G L  S+ 
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  122  VLPIMAAQGSGSVVNIGSDAGRVGSS--GEAVYSAAKGGVIAFSKATAREMARSQVNVNC  179
            V+P M AQGSGS+V ++S +++ G++  G + YSAAK+GV++++KA ARE +  Q+ +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  180  VCPGPTDTALFASMGGDKLREALVKAIPFRRLGQPEDLANVVAFLASDEAGFVTGQTVSV  239
            + PG  +T + +++  D  R+A++ +IP+ RLG ++D+AN   FLASD ++++TG T+ V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  240  SGGL  243
            +GG+
Sbjct  286  NGGM  289

213) Csac_1605 in NC_009437


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  150 bits (554),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 172/251 (69%), Gaps = 9/251 (3%)

Query  3    LLKDKVALITGAS--RGIGRAIALKFGQNGANVVINYSSSEFQAQTLKEEIEKLGVKALT  60
            LL++K+A+ITGA+  RGIGRA A+ F+Q+GA VVI     +++  + ++    LG   L 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  61   IKCDVSNSEEVNAMFSQIEKEFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAF  120
            +  +V++  +V+   + I  +FGR+D+LVNNAGIT+    L +   D+DKV+ ++L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LCAKAASKIMVKQREgnii--nissvvgiignvgQTNYAASKAGIIGLTKSLAKELSSRN  178
            L ++A    M  Q  G+I+  +  S     G  G  +Y+A+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNAIAPGFIKTDMTEVL-SDKVKEMMLSSIPLGRFGEAEEVANVALFLASSLSSYITG  237
            IR+N+IAPG+I TD+T  L  D  ++ ++ +IPLGR+G A++VAN ALFLAS LSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIVVDGGMVM  248
              + V+GGM++
Sbjct  281  ITLDVNGGMLI  291

214) fabG in NC_020156


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  150 bits (553),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 109/252 (44%), Positives = 179/252 (72%), Gaps = 9/252 (3%)

Query  1    MKLLEGKNVIITGGS--RGIGKGIAEVFAKHGANVAFTYASSEGPAlelekelssleIKA  58
            + LL+GK  IITG++  RGIG++ A  FA+HGA V +     E++A +    L+  ++  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATLGEGHLGL  101

Query  59   KAYKSNAADFKEAQELIDQVTKDFDSIDVLINNAGITKDNLLMRISEEDFDKVIEVNLKS  118
             A  ++ ++ K+A   +  +  +F+ IDVL+NNAGIT+    + I   D+DKV++V+L++
Sbjct  102  AANVADESQVKQA---VATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFNMTKAVQRTMLKQRSGSIINMSSVVGVKGNA--GQTNYAASKAGIIGFSKSVALELGS  176
             + M++AV  TM  Q SGSI+ MSSV + +G +  G  +Y+A+KAG++G++K++A E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RNIRCNSIAPGFIETEMTGAL-NEATVQGWRDAIPLKRGGTPEDVANACVFLASDLSTYV  235
             +IR NSIAPG+I+T++TG+L ++   ++  ++IPL R G+++DVANA +FLASDLS+Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQTLNVDGGML  247
            TG TL+V+GGML
Sbjct  279  TGITLDVNGGML  290

215) MycrhN_6081 in NC_016604


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  150 bits (553),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 171/248 (69%), Gaps = 7/248 (2%)

Query  1    MSLLTGQTAVVTGGA--QGLGYAIAEQFIAEGARVVLGDLDLAATEAAAKQLGGDQVAQA  58
            + LL G+ A++TG+A  +G+G A A  F  +GARVV+ DLD +A+  AA  LG ++++ A
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   VRCDVTKADEVDALVAAAIEAFGGLDIMVNNAGITRDATLRKMTEEQFDQVIAVHLKGTW  118
               +V+   +V   VA+ IE FG +D++VNNAGIT+      +   ++D+V+ V L+GT 
Sbjct  103  A--NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NGTKAAAAIMRENKSGAIVNMSSISGK--VGLIGQTNYSAAKAGIVGMTKAAAKELAHLG  176
              ++A  + MR + SG+IV MSS+S++   G++G  +YSAAKAG++G+ KA A+E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAIQPGLIRSAMTEA-MPQHIWDQKLNEVPMGRAGEPAEVAKVALFLASDLSSYMTG  235
            +R+N+I PGLI++ +T + M ++ ++  ++ +P+GR G + +VA+ ALFLASDLSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  TVLEVTGG  243
              L+V GG
Sbjct  281  ITLDVNGG  288

216) M493_06045 in NC_022080


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  150 bits (552),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 174/252 (70%), Gaps = 11/252 (4%)

Query  1    MLEGKVALVTGAS--RGIGRAIALELARQGANVAV-NYDGNEAKANEVVETIRSLGREAF  57
            +L+GK+A++TGA+  RGIGRA A+ +A++GA V + + D + A+     ++  +LG   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQADVACAEDVERMVKTVLDQFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGV  117
            ++ A+VA   +V + V T++++FGR+D+LVNNAGIT+    + ++  + D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAATRTMMKQRYGRIINVASVVGVIGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +L ++A   TM  Q  G I+ ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAIAPGFITTDMTEGL-SEELKADMLKQIPLARFGEPDDVARVVAFLASDAACYMT  234
            +I +N+IAPG+I TD+T GL  +E +  ++  IPL+R+G ++DVA    FLASD + Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

217) Arth_0887 in NC_008541


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  150 bits (551),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 4/248 (1%)

Query  8    RTAIVTGAVSERGIGRATVNYLAAQGWNIGIIdlddalckaaakelaaQYGVRALGVGAN  67
            + AI+TGA SERGIGRAT   +A +G  + I+DLD++  + AA       G   LG++AN
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT----LGEGHLGLAAN  104

Query  68   VADETSVRNAIDEIEAELPQIVALANVAGVSSPVPYLELDAAEWDRVLNINLNGVHYATR  127
            VADE+ V++A+  I  ++ +I  L N AG++ P+  L++ +++ D+VL+++L G    ++
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  128  RVAESMVKNRIGRIVNISSVSAQRGGGTFSKTPYSVAKAGVIGLTRSTARELGEYDITVN  187
             V  +M  +  G IV +SSVSAQRGGG F+   YS AKAGV+GL ++ ARE+G  +I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  188  AISPGPIDTDIMGGTLSQERKDELTKDLVVNRVGSTRDIAAAIAFLISEDAGYISGQTLN  247
            +I+PG I+TDI GG + +ER++ +  ++ + R+G+++D+A A  FL S+ ++Y++G TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  248  VDGGLYMH  255
            V+GG+ +H
Sbjct  285  VNGGMLIH  292

218) fabG in NC_014033


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 107/247 (44%), Positives = 172/247 (70%), Gaps = 8/247 (3%)

Query  3    LLEGKTALITGAA--RGIGKAIALKYASEGCNIAFTDLEVNEETEKEIAA-LGVKAKSYA  59
            LL+GK A+ITGAA  RGIG+A A+ +A +G  + +  L+++E + ++ AA LG    + A
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI--LDLDESAARDAAATLGEGHLGLA  102

Query  60   SNAADFAQTEEVVKAVKEEFGSIDILVNNAGITKDGLMLRMTEQQWDAVIAVNLKSAFNF  119
            +N AD +Q  + V ++ E+FG ID+LVNNAGIT+    L +   + D V+ V+L++++  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  120  IHACVPVMMRQRGGSIINMASVVGVHGNA--GQANYAASKAGLIALAKSIGQEMGPKGIR  177
             +A +P M  Q +GSI+ M+SV + +G +  G ++Y+A+KAG+++L+K++++E GP  IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  178  ANAIAPGFIDTAMTQAL-PDDIRKEWINKIPLRRGGQVEDIANVATFLASDLSSYVSGQV  236
             N+IAPG+I+T +T +L  D+ R   I+ IPL R G  +D+AN A FLASDLSSY++G  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  237  IQVDGGM  243
            ++V+GGM
Sbjct  283  LDVNGGM  289

219) Lacal_2426 in NC_015638


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  149 bits (547),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 107/253 (43%), Positives = 176/253 (70%), Gaps = 11/253 (4%)

Query  1    MKLLEGKTAIITGAS--RGIGKGIAQVFAQHGANVAFTYSSSVEAANELEKELN-TLGIK  57
            + LL+GK AIITGA+  RGIG++ A  FAQHGA V +     ++  +   ++   TLG  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-----LDLDESAARDAAATLGEG  97

Query  58   AKGYKSNAANFNEAQTLAEDVLKEFGAIDVLINNAGITKDNLLMRMGEEDFDKVIEVNLK  117
              G  +N A+ ++ +     ++ +FG IDVL+NNAGIT+    + +   D+DKV++V+L+
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  118  SVFNMTKAVQRTMLKQRKGSIINMSSVVGVKGNA--GQTNYAASKAGIIGFSKSVALELG  175
            + + M++AV  TM  Q  GSI+ MSSV + +G +  G  +Y+A+KAG++G++K++A E+G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  SRNIRSNVIAPGFIETEMTAKL-DEDTVKGWRNAIPLKRGGTPEDIANACVFLASDMSAY  234
            + +IR N IAPG+I+T++T+ L +++   +  ++IPL R G+++D+ANA +FLASD+S+Y
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VTGQTLNVDGGML  247
            +TG TL+V+GGML
Sbjct  278  LTGITLDVNGGML  290

220) fabG in NC_015311


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 107/251 (43%), Positives = 176/251 (71%), Gaps = 9/251 (3%)

Query  1    MKLLEGKTALITGAA--RGIGKSIALKFAEEGANIAFTDLVIDEKGKATEAEIAAKGVKA  58
            + LL+GK A+ITGAA  RGIG++ A+ FA++GA + + DL  +  ++ + A ++   +  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLD-ESAARDAAATLGEGHL--  99

Query  59   KGYASNAADFAQTEEVVRQVKEEFGSIDILVNNAGITKDGLMLRMTEQQWDAVIAVNLKS  118
             G A+N AD +Q  + V  + E+FG ID+LVNNAGIT+    L +   + D V+ V+L++
Sbjct  100  -GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNFIHACIPVMMRQRSGSIINMASVVGVHGNA--GQANYAASKAGLIALAKSIGQEMGP  176
            ++   +A IP M  Q SGSI+ M+SV + +G +  G ++Y+A+KAG+++L+K++++E GP
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  KGIRANAIAPGFIDTAMTQALPQNIRKE-WISKIPLRRGGTVDDIANTAVYLASDLSSYV  235
              IR N+IAPG+I+T +T +L Q+ R++  I  IPL R G+ +D+AN+A++LASDLSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  SGQVIQVDGGM  246
            +G  ++V+GGM
Sbjct  279  TGITLDVNGGM  289

221) VEA_002996 in NC_013456


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  149 bits (547),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 105/247 (43%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSESGAAAISEYLGDNGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     ES+A   +  LG+   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVESIEATLKTINEEFGVIDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTPIYRM  118
             NV+D   +  ++ TI E+FG ID+LVNNAGIT+    + ++ ++ + ++D +L     M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRAGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDEQRAATLSNVPAGRLGDPREIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +DE+R A +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

222) fabG_2 in NC_016610


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  149 bits (547),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 177/252 (71%), Gaps = 11/252 (4%)

Query  1    MKLLEGKTALVTGAA--RGIGKAIALKFASEGANIAFTDLAIDENAQATGKEIAA-LGVK  57
            + LL+GK A++TGAA  RGIG+A A+ FA +GA + + DL      ++++++ AA LG  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLD-----ESAARDAAATLGEG  97

Query  58   VKGYASNAANFDETHQVVEEIVKDFGGVDILVNNAGITKDGLMLRMSEAQWDAVIAVNLK  117
              G A+N A+  +  Q V  I+ +FG +D+LVNNAGIT+    L +  ++ D V+ V+L+
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  118  SAFNFVHACLPVMMRRRSGNIINMASVVGVHGNA--SQANYAASKAGMIAMAKSIAQEMG  175
            +++   +A +P M  + SG+I+ M+SV + +G +  + ++Y+A+KAG+++++K++A+E G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  PKGIRANAIAPGFIETAMTAAL-PENIREEWIKKIPLRRGGTPEDVANIAVFLASDMSSY  234
            P  IR N+IAPG+I+T +T++L  ++ R+  I  IPL R G+++DVAN A+FLASD+SSY
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VSGQVLQVDGGM  246
            ++G  L+V+GGM
Sbjct  278  LTGITLDVNGGM  289

223) fabG in NC_009328


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  149 bits (547),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 172/252 (69%), Gaps = 11/252 (4%)

Query  1    MLEGKIALVTGAS--RGIGRAVALELARQGANVAV-NYAGSEAKANEVVDMIRSLGREAF  57
            +L+GKIA++TGA+  RGIGRA A+ +A++GA V + +   S A+         +LG   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA-----TLGEGHL  99

Query  58   AVQADVARAEDVERMVKTVLDQFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGV  117
            ++ A+VA   +V + V T++++FGR+D+LVNNAGIT+    + ++  + D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAVTRPMMKQRYGRIINVASVVGVIGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +L ++AV   M  Q  G I+ ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAIAPGFITTDMTEAL-SAELKEEMLKQIPLARFGEPDDVARVVAFLASDAAGYMT  234
            +I +N+IAPG+I TD+T +L   E ++ ++  IPL+R+G ++DVA    FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

224) GYMC10_6087 in NC_013406


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  149 bits (550),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 104/247 (43%), Positives = 168/247 (69%), Gaps = 8/247 (3%)

Query  4    LDNKVAIITGAAG--GMGKADALLFAQEGAKVAITDLQEDKIKDVVAEIEALGGEALGIK  61
            L+ K+AIITGAA+  G+G+A A+ FAQ+GA+V I DL+E   +D  A   +LG   LG+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLGLA  102

Query  62   HNVASEEDWVRVVDETVQKFGKIDILVNNAGVSNATPFMDLTVEGWEKTMSINVTSIFLG  121
             NVA E +  + V   ++ FG+ID+LVNNAG++++   +D+   + +K + +++ + +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  122  QKYVIPHMIEAGGGSIVNISSIAGLTGGS--GAGPYTASKGAVRMLTKATAVDFAKHNIR  179
             + VIP M   G+GSIV +SS+++  GG+  G+  Y+A+K++V  L KA A +F+ ++IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  180  CNSVHPGYIETPMTVDLFKDEKMMQWFQSQTPLPRLGKAEDIARGVLFLASDESSYITGV  239
             NS+ PG I+T +T +L +DE+    +++  PL RLG A+D+A + LFLASD SSY+TG+
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  ELPIDGG  246
             L ++GG
Sbjct  282  TLDVNGG  288

225) fabG in NC_017481


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  149 bits (550),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 176/251 (71%), Gaps = 11/251 (4%)

Query  1    MKLKEKVVLVTGSS--RGIGAEIALAFARKGSTVV-LNGRHQIPNDMISKMEEIGCNYDV  57
            M L+ K+ ++TG++  RGIG   A++FA+ G+ VV L+  +  + D  + + E       
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE---GHLG  100

Query  58   ILGDISIESDVKRIVKEVIEKFGRIDILINNAGITNDKLLIGMKPADFKSVIDVNLIGTF  117
            + ++++ ES+VK+ V  +IE FGRID+L+NNAGIT+    ++++P+D+  V+DV+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  QMTQAVVKKMYKQRSGVIINLASVIGQHGN--IGQANYAASKAGVIGLTKSVAKEGAMRN  175
             M+QAV+  M  Q SG I+ ++SV +Q+G   +G ++Y+A+KAGV+GL K++A+E +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  IRVNAIAPGMIVSDMT-DVLSDKVKENILTTIPLNRFGKAEEVAQTAVFLAEN--DYITG  232
            IR+N+IAPG+I +D+T +++ D  ++ I+  IPL R+G A++VA++A+FLA +   Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVITVDGGMTI  243
              + V+GGM I
Sbjct  281  ITLDVNGGMLI  291

226) Namu_3349 in NC_013235


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 112/247 (46%), Positives = 169/247 (69%), Gaps = 9/247 (3%)

Query  9    RTAVITGVGAERGIGRATAHRFARDGWAIVGLDLDGDAAEKLAAELTERYGVPAFGAAVD  68
            + A+ITG ++ERGIGRATA  FA++G  +V LDLD  AA   AA L E      +G A +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE----GHLGLAAN  104

Query  69   VADEASVLAVRDAVAA--ANLPTVGAVLNIAGITSPVPFLDTTVELWNRIFAVNVTGTYL  126
            VADE+ V   ++AVA+   ++  ++ ++N AGIT P+  LD      ++++ V++ GT L
Sbjct  105  VADESQV---KQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  127  VTKAFLPDMIAGGYGRVLNMSSVSAQQGGGVFGKTPYSSAKAAVLGFTKALARELGPTGI  186
            +++A +P M A G G ++ MSSVSAQ+GGG+FG   YS+AKA+VLG+ KA+ARE+GP  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  187  TVNALTPGAVDTDIRVHGTTPEIEEAIVKSIPLGRQASVDDVTSLFAFLASEEAGYLTGT  246
             +N+++PG ++TDI       E  +AI+ +IPLGR ++ +DV++   FLAS+ ++YLTG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  247  TQNVNGG  253
            T +VNGG
Sbjct  282  TLDVNGG  288

227) Coch_1503 in NC_013162


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 108/256 (43%), Positives = 179/256 (70%), Gaps = 17/256 (6%)

Query  1    MKLLEGKTAIITGAS--RGIGRGIAKVFASHGANI---AFSYSSSVDAAMAL-EKELATK  54
            + LL+GK AIITGA+  RGIGR+ A  FA HGA +    +  S++ DAA +L E +L   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---  99

Query  55   GVKVKGYQSDASNFAQSQEFVDAVVAEFGTVDILVNNAGITKDNLLMRISEEDFDKVIEV  114
                 G  ++ ++ +Q ++ V +++ +FG +D+LVNNAGIT+    + I   D+DKV++V
Sbjct  100  -----GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDV  154

Query  115  NLKSVFNMTKAVQRIMLKQRKGSIINMSSVVGVKGNA--GQSNYAASKAGIIGFTKSIAL  172
            +L++ + M++AV   M  Q  GSI+ MSSV + +G +  G ++Y+A+KAG++G+ K++A 
Sbjct  155  SLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAR  214

Query  173  ELGSRNIRCNAIAPGFIETEMT-AVLDEKVVQGWRDVIPLKRGGQPEDVANACVFLASDM  231
            E+G+ +IR N+IAPG+I+T++T +++++   ++  + IPL R G ++DVANA +FLASD+
Sbjct  215  EFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  232  SAYITGQVLNVDGGML  247
            S+Y+TG  L+V+GGML
Sbjct  275  SSYLTGITLDVNGGML  290

228) fabG2 in NC_020210


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 171/252 (68%), Gaps = 11/252 (4%)

Query  1    MLEGKIALVTGAS--RGIGRAVALELARQGANVAV-NYAGSEAKANEVVEAIRSLGREAI  57
            +L+GKIA++TGA+  RGIGRA A+ +A++GA V + +   S A+     +A  +LG   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQADVARAEDVERMVKTTIDHFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGV  117
            ++ A+VA   +V + V T I+HFGR+D+LVNNAGIT+    + ++  + D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAATRPMMKQRYGRIVNIASVVGVIGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +L ++A    M  Q  G IV ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFITTDMTEAL-SPELKAEMLKQIPLARFGEPDDVARVVAFLASDAASYMT  234
            +I +N++APG+I TD+T +L   E +  ++  IPL+R+G ++DVA    FLASD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

229) GYMC52_1095 in NC_014915


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 171/252 (68%), Gaps = 11/252 (4%)

Query  1    MLEGKIALVTGAS--RGIGRAVALELARQGANVAV-NYAGSEAKANEVVEAIRSLGREAI  57
            +L+GKIA++TGA+  RGIGRA A+ +A++GA V + +   S A+     +A  +LG   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQADVARAEDVERMVKTTIDHFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGV  117
            ++ A+VA   +V + V T I+HFGR+D+LVNNAGIT+    + ++  + D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAATRPMMKQRYGRIVNIASVVGVIGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +L ++A    M  Q  G IV ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFITTDMTEAL-SPELKAEMLKQIPLARFGEPDDVARVVAFLASDAASYMT  234
            +I +N++APG+I TD+T +L   E +  ++  IPL+R+G ++DVA    FLASD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

230) fabG in NC_013411


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 171/252 (68%), Gaps = 11/252 (4%)

Query  1    MLEGKIALVTGAS--RGIGRAVALELARQGANVAV-NYAGSEAKANEVVEAIRSLGREAI  57
            +L+GKIA++TGA+  RGIGRA A+ +A++GA V + +   S A+     +A  +LG   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQADVARAEDVERMVKTTIDHFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGV  117
            ++ A+VA   +V + V T I+HFGR+D+LVNNAGIT+    + ++  + D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAATRPMMKQRYGRIVNIASVVGVIGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +L ++A    M  Q  G IV ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFITTDMTEAL-SPELKAEMLKQIPLARFGEPDDVARVVAFLASDAASYMT  234
            +I +N++APG+I TD+T +L   E +  ++  IPL+R+G ++DVA    FLASD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

231) fabG in NC_010612


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 106/249 (43%), Positives = 170/249 (69%), Gaps = 7/249 (2%)

Query  5    LLNGQIAVVTGGA--QGLGLAIAERFVSEGARVVLGDVNLEATEAAAKQLGGGEVAVAVR  62
            LL+G+IA++TG+A  +G+G A A  F  +GARVV+ D++  A+  AA  LG G++++A  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  63   CDVTKADEVETLLQTALERFGGLDIMVNNAGITRDATMRKMTEEQFDQVIDVHLKGTWNG  122
             +V+   +V   + T +E+FG +D++VNNAGIT+      +   ++D+V+DV L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  IRLAAAIMRENKRGAIVNMSSVSGK--VGMVGQTNYSAAKAGIVGMTKAAAKELAHVGVR  180
             +   + MR +  G+IV MSSVS++   G+ G  +YSAAKAG++G+ KA A+E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  181  VNAIAPGLIRSAMTEAMPQRIWDQKLAE-VPMGRAGEPSEVASVALFLACDLSSYMTGTV  239
            +N+IAPGLI++ +T ++ Q  + + + E +P+GR G + +VA+ ALFLA DLSSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  240  LDVTGGRFI  248
            LDV GG +I
Sbjct  283  LDVNGGMLI  291

232) fabG in NC_017626


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

233) fabG in NC_008253


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

234) fabG in NC_011748


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

235) fabG in NC_017631


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

236) fabG in NC_008563


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

237) fabG in NC_020163


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

238) fabG in NC_010468


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

239) fabG in NC_012759


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

240) i14_1247 in NC_017652


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

241) i02_1247 in NC_017651


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

242) EcDH1_2554 in NC_017625


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

243) fabG in NC_017638


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

244) fabG in NC_009801


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

245) fabG in NC_011745


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

246) ETEC_1158 in NC_017633


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

247) fabG in NC_009800


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

248) fabG in NC_011741


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNEIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

249) fabG in NC_011750


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

250) fabG in NC_017628


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

251) fabG in NC_010473


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

252) fabG in NC_020518


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

253) fabG in NC_000913


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

254) fabG in NC_007779


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

255) fabG in NC_017660


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

256) EKO11_2741 in NC_016902


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

257) fabG in NC_011993


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAITDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

258) fabG in NC_022364


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

259) fabG in NC_017644


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

260) fabG in NC_013353


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

261) fabG in NC_018650


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

262) fabG in NC_018661


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

263) fabG in NC_018658


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

264) fabG in NC_013364


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNEIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

265) fabG in NC_011601


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

266) fabG in NC_013361


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNEIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

267) fabG in NC_013941


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

268) fabG in NC_017656


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

269) fabG in NC_017646


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

270) fabG in NC_017634


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAITDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

271) fabG in NC_017663


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

272) fabG_1 in NC_022370


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

273) fabG in NC_011742


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

274) fabG in NC_011415


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

275) ECSF_0992 in NC_013654


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

276) fabG in NC_010498


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

277) fabG in NC_017632


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

278) fabG in NC_011751


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

279) fabG in NC_017641


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

280) fabG in NC_007946


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

281) fabG in NC_017635


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

282) fabG in NC_017664


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

283) GTCCBUS3UF5_13790 in NC_016593


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 171/252 (68%), Gaps = 11/252 (4%)

Query  1    MLEGKIALVTGAS--RGIGRAVALELARQGANVAV-NYAGNEAKANEVVEAIRSLGREAI  57
            +L+GKIA++TGA+  RGIGRA A+ +A++GA V + +   + A+     +A  +LG   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQADVARAEDVERMVKTTIDHFGRLDILVNNAGITRDNLLMRMKEEEWDAVMNTNLKGV  117
            ++ A+VA   +V + V T I+HFGR+D+LVNNAGIT+    + ++  + D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAATRPMMKQRYGRIVNIASVVGVIGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +L ++A    M  Q  G IV ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFITTDMTEAL-SPELKGEMLKQIPLARFGEPDDVARVVAFLASDAASYMT  234
            +I +N++APG+I TD+T +L   E +  ++  IPL+R+G ++DVA    FLASD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

284) fabG in NC_010102


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 173/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMGNA--GQANYSAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G ++YSAAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

285) fabG in NC_010658


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

286) fabG in NC_007613


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

287) fabG in NC_017328


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

288) fabG in NC_004741


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

289) fabG in NC_004337


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

290) fabG in NC_008258


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

291) fabG in NC_016822


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

292) fabG in NC_007384


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

293) VPBB_1888 in NC_019955


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 103/247 (42%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSESGAAAISEYLGENGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     ES+A   +  LGE   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVESIEATLKTINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRM  118
             NV+D   +  ++ TI ++FG ID+LVNNAGIT+    + ++ ++ + +++ +L     M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRAGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRAATLANVPAGRLGDPREIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

294) M636_11560 in NC_021848


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 103/247 (42%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSESGAAAISEYLGENGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     ES+A   +  LGE   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVESIEATLKTINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRM  118
             NV+D   +  ++ TI ++FG ID+LVNNAGIT+    + ++ ++ + +++ +L     M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRAGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRAATLANVPAGRLGDPREIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

295) M634_12470 in NC_021847


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     E++A   +  LGE   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVESIEATLKTINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRM  118
             NV+D   +  ++ TI ++FG ID+LVNNAGIT+    + ++ ++ + +++ +L     M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRAGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRAATLANVPAGRLGDPREIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

296) fabG in NC_006370


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSLEGKVALVTGAS--RGIGRAIAEILVERGATVIGTATSESGAEAISAYLGDKGKGLAL  58
            M L+GK+A++TGA+  RGIGRA A  + ++GA V+     ES+A   +A LG+   GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTSPDSIADTLKQIKDQFGDIDILVNNAGITRDNLLMRMKDDEWQDIMDTNLTSVFRLS  118
            NV+    + +++  I ++FG ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRAMMKKRNGRIISIGSVVGMMGNA--GQTNYAAAKAGLIGFTKSLAREVASRGITV  176
            +AV+ +M  + +G I+ ++SV +  G +  G  +Y+AAKAG++G+ K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NAVAPGFIETDMTKAL-NDEQRAATLANVPAGRLGDPREIAAAVAFLASEDAAYVTGETL  235
            N++APG+I+TD+T +L +DE+R A +  +P GRLG ++++A A  FLAS+ ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

297) fabG in NC_014623


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 177/249 (72%), Gaps = 10/249 (4%)

Query  4    FKDKVVLVTGGS--RGIGRACAVAFAKAGASTVVISYAGNEGAAQETLGLIQAAGAKGEA  61
            +++K+ ++TG++  RGIGRA AV+FA+ GA  V++    +E+AA+++ + + + G  G A
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAATL-GEGHLGLA  102

Query  62   IRFDVSDSEACSSAIEGLIKAHGRLDVLVNNAGVAVDALVMRVKDEDWDKQLDTNLKGAF  121
               +V+D      A+  +I   GR+DVLVNNAG++     + ++  D DK LD +L+G++
Sbjct  103  A--NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  ALIRAVSRPMMKQRGGAIINLTSIVGETGNG--GQVAYSASKAGLIGLTKSVAKELASRN  179
             + +AV   M  Q +G+I+ ++S+ ++ G G  G   YSA+KAG++GL K++A+E+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNAVSPGFIGTDMTATLNEEMRKR-MVDSIPLARLGAPEEVAQSVLFLASDAASYITG  238
            IR+N+++PG+I TD+T+ L ++ R++ ++++IPL+RLGA+++VA++ LFLASD +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  EVLKVNGGM  247
              L VNGGM
Sbjct  281  ITLDVNGGM  289

298) fabG2 in NC_012559


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 105/249 (43%), Positives = 170/249 (69%), Gaps = 8/249 (3%)

Query  1    MRLQGKVSIITGAAS--GIGRATALKFAREGAIVAVCDLNQGAIDEVVAEIKAAGGQAVG  58
            M LQGK++IITGAAS  GIGRATA+ FA++GA V + DL+++A  +  A +   G   +G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   YIVNVTDKAQIADMVGGLKGQFGRIDVLVNNAGIVQDAQLIKMTEDQFDKVIDINLKGVY  118
               NV+D +Q+ + V+ +  +FGRIDVLVNNAGI Q  + + +  +++DKV+D++L+G  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCTRAVVDTMVEQGSGVILNASSVVGVYGN--FGQTNYAATKFGVIGFVKTWAKELGKKG  176
              ++AV+ TM  QGSG I+  SSV +  G   FG  +Y+A+K GV+G+ K+ A+E+G   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  IRANAVCPGFVATPILKA-MPEKVIQAMEDKVPMKRMAAPEEIANVYAFLASDEASYING  235
            IR N++ PG++ T I  + M +   +A+ + +P+ R++A++++AN   FLASD +SY+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  AAIEVTGGL  244
             +++V GG+
Sbjct  281  ITLDVNGGM  289

299) N646_1130 in NC_022349


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 104/247 (43%), Positives = 170/247 (69%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSESGAAAISEYLGDNGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     ES+A   +  LG+   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVESIEATLKTINEEFGVIDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTPIYRM  118
             NV+D   +  ++ TI E+FG ID+LVNNAGIT+    + ++ ++ + ++D +L     M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRAGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRAATLSNVPAGRLGDPSEIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A +  +P GRLG + ++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

300) Pse7367_0369 in NC_019701


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 106/255 (42%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  1    MKLLENKVALITGAS--RGIGRATAIALAEQGAKVVINYARSSAAAEELVKEIESSGGEA  58
            + LL+ K+A+ITGA+  RGIGRATA+++A++GA+VVI         E   ++  ++ GE+
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-----LDLDESAARDAAATLGEG  97

Query  59   -IALQADVSQADQVDALVKAAMDKWGQIDVLVNNAGITKDTLLLRMKPEDWQAVINLNLT  117
             ++L A+V++  QV   V + ++  G+IDVLVNNAGIT+    L ++P D + V++++L 
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  118  GVFLCTRAIAKIMLKQKSGRIINIASVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELA  175
            G +L ++A+   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E++
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  PRGITVNAVSPGFIATDMTADLKADK----ILEFIPLGRYGDPTEVAGTIRFLAADPAAS  231
            P  I +N+++PG+I TD+T++L  D     I+E IPLGR G + +VA +  FLA+D  +S
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSS  276

Query  232  YITGQVFNVDGGMVM  246
            Y+TG  ++V+GGM++
Sbjct  277  YLTGITLDVNGGMLI  291

301) ARUE_c42620 in NC_018531


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (543),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 112/253 (45%), Positives = 170/253 (68%), Gaps = 10/253 (3%)

Query  6    RTAVLTGATSDRGIGLTTARRYANQGWGIVILDLDGEKSAKVAAEIANEFNVPAFGYEID  65
            + A++TGA+S+RGIG +TA  +A++G  +VILDLD   +   AA +++      +G   +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HLGLAAN  104

Query  66   VANeasvttaqaavaaevaaGNLPPVGALANIAGITSPVPFLETTLELWHKVMDVNATGT  125
            VA+E+ V  A A++       ++  ++ L N AGIT P+  L+      +KV+DV+  GT
Sbjct  105  VADESQVKQAVATII-----EHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  126  YLVTKAFLPDMIANGWGRIVNMSSVSAQRGGGVFGKVPYSAAKAAILGFTKALAREIGET  185
             L+++A +P M A+G G IV MSSVSAQRGGG+FG   YSAAKA++LG+ KA+ARE+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  186  GVTVNAITPGAVDTNIRVG-STDEQEAAINAGIPLGRNATTEEVAAVITFLSSEDSAYLT  244
             + +N+I+PG ++T+I  G   DE+  AI  GIPLGR +++++VA    FL+S+ S+YLT
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  245  GTTIDINGGSHIH  257
            G T+D+NGG  IH
Sbjct  280  GITLDVNGGMLIH  292

302) fabG in NC_002570


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (543),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 111/251 (45%), Positives = 168/251 (67%), Gaps = 9/251 (3%)

Query  1    MLQGKTAIVTGAS--RGIGRATAMELARHGANVVVNYAGNkekaekvvaeikeLGVEAIA  58
            +LQGK AI+TGA+  RGIGRATA+ +A+HGA VV+                  LG   ++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL----DLDESAARDAAATLGEGHLG  100

Query  59   IQADVADSESVQAMVKETIDTFGAVDILVNNAGITRDNLFMRMKEEDWDAVIDTNLKGVF  118
            + A+VAD   V+  V   I+ FG +D+LVNNAGIT+    + ++  D D V+D +L+G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  HCSKAVTRPMMKQRFGRIINVSSVVGAIGNA--GQANYVAAKAGVIGLTKTLARELANRN  176
              S+AV   M  Q  G I+ +SSV +  G +  G ++Y AAKAGV+GL K++ARE++  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVAPGFIETDMTGELPEDVKAQ-MLGQIPLARLGQPEEVAKAVRFLASDDASYLTG  235
            I +N++APG+I+TD+TG L +D + + ++  IPL+RLG +++VA+A  FLASD +SYLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  QTIHVNGGMVM  246
             T++VNGGM++
Sbjct  281  ITLDVNGGMLI  291

303) MULP_04198 in NC_020133


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (543),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 105/249 (43%), Positives = 170/249 (69%), Gaps = 7/249 (2%)

Query  5    LLNGQIAVVTGGA--QGLGLAIAERFVSEGARVVLGDVNLEATEAAAKQLGGGEVAVAVR  62
            LL+G+IA++TG+A  +G+G A A  F  +GARVV+ D++  A+  AA  LG G++++A  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  63   CDVTKADEVETLLQAALERFGGLDIMVNNAGITRDATMRKMTEEQFDQVIDVHLKGTWNG  122
             +V+   +V   + + +E+FG +D++VNNAGIT+      +   ++D+V+DV L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  IRLAAAIMRENKRGAIVNMSSVSGK--VGMVGQTNYSAAKAGIVGMTKAAAKELAHVGVR  180
             +   + MR +  G+IV MSSVS++   G+ G  +YSAAKAG++G+ KA A+E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  181  VNAIAPGLIRSAMTEAMPQRIWDQKLAE-VPMGRAGEPSEVASVALFLACDLSSYMTGTV  239
            +N+IAPGLI++ +T ++ Q  + + + E +P+GR G + +VA+ ALFLA DLSSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  240  LDVTGGRFI  248
            LDV GG +I
Sbjct  283  LDVNGGMLI  291

304) Selsp_1727 in NC_015437


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (543),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 173/252 (69%), Gaps = 9/252 (3%)

Query  1    MLLDGKTALVTGAS--RGIGRAIALCLAAEGARVAINYAGNVKAAEEVKASIEAAGGTAI  58
            MLL+GK A++TGA+  RGIGRA A+ +A +GARV I    ++  +    A+   + G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  59   LCQADIADSAAVEAMIADVVKEFGAIDILVNNAGITRDTLLMRMKDEDFAKVLDTNLKGV  118
            L  A++AD + V   +A ++ +FG ID+LVNNAGIT+    + ++  D+ KVLD +L+G 
Sbjct  101  L-AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FYCTKAVSKLMMKKRAGRIINMASVVGLVGNA--GQTNYAAAKAGVIGFSKSAAKELASR  176
            +  ++AV   M  + +G I+ M+SV +  G +  G  +Y+AAKAGV+G++K+ A+E+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GITVNVVAPGFIGTDMTAGL-PESVKEKMLTDIPLGRMGEPEDVANAVLFLASDQASYIT  235
             I +N +APG+I TD+T+GL  +  ++ ++ +IPLGR+G ++DVANA LFLASD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQVVNVDGGMVM  247
            G  ++V+GGM++
Sbjct  280  GITLDVNGGMLI  291

305) GC56T3_2363 in NC_014206


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (542),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 171/252 (68%), Gaps = 11/252 (4%)

Query  1    MLEGKMALVTGAS--RGIGRAVALELARQGANVAV-NYAGSEAKANEVVEAIRSLGREAI  57
            +L+GK+A++TGA+  RGIGRA A+ +A++GA V + +   S A+     +A  +LG   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQADVARAEDVERMVKTTIDHFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGV  117
            ++ A+VA   +V + V T I+HFGR+D+LVNNAGIT+    + ++  + D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAATRPMMKQRYGRIVNIASVVGVIGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +L ++A    M  Q  G IV ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFITTDMTEAL-SPELKAEMLKQIPLARFGEPDDVARVVAFLASDAASYMT  234
            +I +N++APG+I TD+T +L   E +  ++  IPL+R+G ++DVA    FLASD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

306) fabG in NC_021491


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (543),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 166/246 (68%), Gaps = 5/246 (2%)

Query  1    MKLANKVALITGAG--QGMGRAIAQRFAEAGARVVAVDINLQAAEQTIEGLGEHALALAC  58
            M L  K+A+ITGA+  +G+GRA A  FA+ GARVV +D++  AA ++   LGE  L+LA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVADSDSVAAAMHRLEARFGALDILVNNAGVGSVDSFVDTPDAHWQRVIGVNLTGTFLCS  118
            NVAD   V  A+  +  +FG +D+LVNNAG+      +D   ++ ++V++V+L GT+L S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  REAVRLMQKHAIQGVVINISSTAAMTGE--GPSHYCAAKAGVMGLTRSMARELAASGIRV  176
            +  +  M+ ++  ++V   S +A   G   G +HY AAKAGV+GL ++MARE+++  IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NTLVPGPTNTPMMADI-PDEWLQGMLKAIPLGRMGEVDEIARAAVFLASSDASFITGQNL  235
            N++ PG  +T + +++  DE+ ++++ +IPLGR+G  +++A AA+FLAS  +S++TG  L
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  AVNGGM  241
             VNGGM
Sbjct  284  DVNGGM  289

307) fabG in NC_007929


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (542),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 175/251 (70%), Gaps = 11/251 (4%)

Query  1    MELKEKVVLVTGSS--RGIGAEIALAFARKGSTVV-LNGRHQIPNDMISKMEEIGCNYDV  57
            M L+ K+ ++TG++  RGIG   A++FA+ G+ VV L+  +  + D  + + E       
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE---GHLG  100

Query  58   ILGDISIESDVKRIVKEAIEKFGRIDILINNAGITNDKLLIGMKPADFKSVIDVNLIGTF  117
            + ++++ ES+VK+ V   IE FGRID+L+NNAGIT+    ++++P+D+  V+DV+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  QMTQAVVKKMYKQRSGVIINLASVIGQHGN--IGQANYAASKAGVIGLTKSVAKEGAMRN  175
             M+QAV+  M  Q SG I+ ++SV +Q+G   +G ++Y+A+KAGV+GL K++A+E +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  IRVNAIAPGMIVSDMT-DVLSDKVKENILTTIPLNRFGKAEEVAQTAVFLAEN--DYITG  232
            IR+N+IAPG+I +D+T +++ D  ++ I+  IPL R+G A++VA++A+FLA +   Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVITVDGGMTI  243
              + V+GGM I
Sbjct  281  ITLDVNGGMLI  291

308) Poras_1696 in NC_015501


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 112/253 (45%), Positives = 172/253 (68%), Gaps = 12/253 (4%)

Query  1    MKLLQDKVALITGAA--RGIGKAIATKYAEAGCHVAISDLKVADEAKDYYTQLAQEC-GV  57
            + LLQ+K+A+ITGAA  RGIG+A A  +A+ G +V I DL     A+D  + L++   G+
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLD-ESAARDAAATLGEGHLGL  101

Query  58   TIRTYESNAADFEAAHQLVEQIVADFGKLDILVNNAGITRDGLLLRMSEQQWDAVINVNL  117
            +     +N AD     Q V  I+ +FG++D+LVNNAGIT+    L +   + D V++V+L
Sbjct  102  A-----ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  118  KSAFNMTHAVAPVMMKQRQGSIINMASVVGVSGNA--GQVNYSASKAGMIALAKSVAKEL  175
            ++++ M++AV P M  Q  GSI+ M+SV +  G +  G  +YSA+KAG+++L+K++A+E+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  176  GSRGIRANSIAPGFIESDMTAVLSEEVRKEWAKQ-IPLRRGGKPEDVANVALFLASDLSS  234
            G+  IR NSIAPG+I++D+T+ L ++ R++   + IPL R G ++DVAN ALFLASDLSS
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  235  YMTGQVLSCCGGM  247
            Y+TG  L   GGM
Sbjct  277  YLTGITLDVNGGM  289

309) Ccan_14700 in NC_015846


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (540),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 171/252 (68%), Gaps = 9/252 (3%)

Query  1    MKLLTGKTAIITGAS--RGIGRGIAQIFAKHGANIAFTYSASVEAANELEKELNQEGIKA  58
            + LL GK AIITGA+  RGIGR+ A  FA+HGA + +       AA +    L +  +  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATLGEGHL--  99

Query  59   KGYKSNAADFQEAQKLADEVLAEFGSIDILINNAGITKDNLLMRISEEDFDKVIEVNLKS  118
             G  +N AD  + ++    ++ +FG ID+L+NNAGIT+    + I   D+DKV++V+L++
Sbjct  100  -GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFNMTKAVQRTMLKQRKGSIINISSVVGVKGNA--GQSNYAASKAGMLGFTKSIALELGS  176
             + M++AV  TM  Q  GSI+ +SSV + +G +  G ++Y+A+KAG+LG+ K++A E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RNIRCNAIAPGFIETEMTAKL-DEKVIQGWRDNIPLKRGGTPEDVANACVFLASDMSDYI  235
             +IR N+IAPG+I+T++T+ L ++   ++  + IPL R G+++DVANA +FLASD+S Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVLNVDGGML  247
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

310) fabG in NC_002620


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (540),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKAAIVTGGS--RGIGFGIAKLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVSF  61
            LL  K AI+TG++  RGIG + A  FA+HGA V I +++E A++ AA  L++   + +++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE---GHLGL  101

Query  62   ALVDVSKNDMVSAQVQKFLAEYGTIDVVVNNAGITRDSLLMRMSEEEWSSVIDTNLGSIY  121
            A  +V+ +  V   V  ++ ++G IDV+VNNAGIT+    + +   +   V+D +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIVNISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+IV +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKGL-SDNLKNEWLKGVPLGRVGTPEEIAMAALFLASNQSSYITG  238
            IR+N IAPG+I+TD+T GL  D+ ++  + G+PLGR+G+++++A AALFLAS+ SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

311) fabG in NC_011353


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (540),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILVQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

312) fabG in NC_002655


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (540),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILVQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

313) fabG in NC_002695


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (540),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILVQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

314) fabG in NC_013008


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (540),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILVQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

315) fabG in NC_017906


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  147 bits (540),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILVQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

316) Spea_2494 in NC_009901


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 106/244 (44%), Positives = 166/244 (69%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAVAETLVSAGAVVIGTATSERGAEAIQAYLGDKGHGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+   GA V+     E +A    A LG+   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDADSVKALFETIKQRAGDVDILVNNAGITRDNLLMRMKDDEWNDILDTNLTSIFRTSKA  124
            +D   VK    TI ++ G +D+LVNNAGIT+    + ++ ++ + +LD +L + +  S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRPMMKKRHGRIINIGSVVGTMGNA--GQTNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+  M  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQ-QQAIMSQVPMERLGQAQEIAHAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+ ++AI+  +P+ RLG AQ++A+A LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

317) Pnap_2307 in NC_008781


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 106/249 (43%), Positives = 170/249 (69%), Gaps = 8/249 (3%)

Query  4    LQNKVSLITGAA--QGIGLATALKFASEGAIVIVCDIRQSAIDEAVRQCQALGAQAAGYV  61
            LQ K+++ITGAA  +GIG ATA+ FA +GA V++ D+ +SA  +A     +LG    G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA---ATLGEGHLGLA  102

Query  62   MDVTQRDRVDAVVGQVMEQFGRIDVLVNNAGITQDARLQKMTLEQFDRVIDVNLRGVFHC  121
             +V++  +V   V+ ++E+FGRIDVLVNNAGITQ  +   +   ++D+V+DV+LRG +  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  122  AQAVTDSMVAQGSGVILNASSVVGIYGN--FGQTNYAASKFGVIGFTKTWSRELGPKGIR  179
            +QAV  +M AQGSG I+  SSV +  G   FG  +Y+A+K GV+G+ K+ +RE+GP  IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  180  VNAVAPGFVTTPILATIPENVLKE-MEHRVPLKRLGRPEEIANVYAFLASDEASYINGAV  238
            +N++APG++ T I + + ++  ++ + + +PL RLG ++++AN   FLASD +SY+ G  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  239  IEVSGGMTV  247
            ++V+GGM +
Sbjct  283  LDVNGGMLI  291

318) Marpi_0090 in NC_016751


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MKLENKICVVTGA--NRGIGKKISEVFVSEGATVLGFARNLDALKKVEEELNEKGPGKFI  58
            M L+ KI ++TGA  +RGIG+  +  F  +GA V+ +  +  A +     L E      +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HL  99

Query  59   GYKVDVSNSDEINNTVKTIAKEFKRIDVLVNNAGVTKDMLLLLMKEEDFDFVINVNLKGV  118
            G   +V++  +++++V TI  +F RIDVLVNNAG+T+ +  L ++  D+D V++V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLVTKAVAKVMRKQKEGSIINISSVVGLEGN--IGQTNYSASKAGVIGMTKTWAKELTMK  176
            +L+++AV   MR Q  GSI+ +SSV +  G   +G  +YSA+KAGV+G+ K+ A+E+   
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG--  217

Query  177  GEQIRVNAVAPGFIETDMTKEL-NEDFKKAALERILLKRMGSAEEVAKVVLFLASDDSSY  235
             +QIR+N++APG+I+TD+T  L +++ + A +E I L R+G+A++VA+  LFLASD SSY
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  236  ITGQVIRVDGGI  247
            +TG  + V+GG+
Sbjct  278  LTGITLDVNGGM  289

319) MAP4_1415 in NC_021200


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 169/246 (69%), Gaps = 7/246 (2%)

Query  6    LLSGQTAVITGGA--QGLGFAIAERFVAEGARVVLGDVNLEATQTAAKQLGGDQVALAVR  63
            LL G+ A+ITG+A  +G+G A A  F  +GARVV+ D++  A++ AA  LG ++++LA  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  64   CDVTKSSEVETLIQTAVERFGGLDIMVNNAGITRDATMRKMTEEQFDQVIAVHLKGTWNG  123
             +V+  S+V   + T +E+FG +D++VNNAGIT+      +   ++D+V+ V L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  TRLAAAIMRENKRGAIINMSSVSGK--VGMVGQTNYSAAKAGIVGMTKAAAKELAYLGVR  181
            ++   + MR +  G+I+ MSSVS++   G+ G  +YSAAKAG++G+ KA A+E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  182  VNAIAPGLIRSAMTEA-MPQRIWDSKVAEVPMGRAGEPSEVASVALFLASDMSSYMTGTV  240
            +N+IAPGLI++ +T + M +  +++ +  +P+GR G + +VA+ ALFLASD+SSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  241  MEITGG  246
            +++ GG
Sbjct  283  LDVNGG  288

320) fabG in NC_008596


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 167/246 (68%), Gaps = 7/246 (2%)

Query  1    MLTGQTAVVTGGA--QGLGLAIAKRFISEGARVVLGDLNSEATEAAVEELGGSEVAAAVR  58
            +L G+ A++TG+A  +G+G A A  F  +GARVV+ DL+  A+  A   LG ++++ A  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  59   CDVTSSADVDALVQAAVERFGGLDIMVNNAGITRDATLRKMTEEQFDQVIAVHLKGTWNG  118
             +V+  ++V   V + +E+FG +D++VNNAGIT+      +   ++D+V+ V L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  TKAAAAIMRENKRGAIVNMSSISGK--VGLIGQTNYSAAKAGIVGMTKAAAKELAYLGVR  176
            ++A  + MR +  G+IV MSS+S++   G++G  +YSAAKAG++G+ KA A+E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNAIQPGLIRSAMTEA-MPQRIWDEKLAEIPMGRAGEPDEVAKVALFLASDLSSYMTGTV  235
            +N+I PGLI++ +T + M +  ++  +  IP+GR G +++VA+ ALFLASDLSSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LEVTGG  241
            L+V GG
Sbjct  283  LDVNGG  288

321) fabG in NC_007606


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (539),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDLASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

322) fabG2 in NC_018289


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (539),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 168/248 (68%), Gaps = 7/248 (2%)

Query  1    MSLLTGQTAVVTGGA--QGLGLAIAKRFISEGARVVLGDLNSEATEAAVEELGGSEVAAA  58
            + LL G+ A++TG+A  +G+G A A  F  +GARVV+ DL+  A+  A   LG ++++ A
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   VRCDVTSSADVDALVQAAVERFGGLDIMVNNAGITRDATLRKMTEEQFDQVIAVHLKGTW  118
               +V+  ++V   V + +E+FG +D++VNNAGIT+      +   ++D+V+ V L+GT 
Sbjct  103  A--NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NGTKAAAAIMRENKRGAIVNMSSISGK--VGLIGQTNYSAAKAGIVGMTKAAAKELAYLG  176
              ++A  + MR +  G+IV MSS+S++   G++G  +YSAAKAG++G+ KA A+E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAIQPGLIRSAMTEA-MPQRIWDEKLAEIPMGRAGEPDEVAKVALFLASDLSSYMTG  235
            +R+N+I PGLI++ +T + M +  ++  +  IP+GR G +++VA+ ALFLASDLSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  TVLEVTGG  243
              L+V GG
Sbjct  281  ITLDVNGG  288

323) PP4_27020 in NC_021505


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (538),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 165/246 (68%), Gaps = 5/246 (2%)

Query  1    MKLANKVALITGAG--QGMGRAIAQRFAEAGARVVAADINLQAAEQTIEGLGEHALALAC  58
            M L  K+A+ITGA+  +G+GRA A  FA+ GARVV  D++  AA ++   LGE  L+LA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVADSDSVAAAMHRLEARFGALDILVNNAGVGSVDTFVDTPDAHWQRVIGVNLTGTFLCS  118
            NVAD   V  A+  +  +FG +D+LVNNAG+      +D   ++ ++V++V+L GT+L S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  REAVRLMQKHAIQGVVINISSTAAMTGE--GPSHYCAAKAGVMGLTRSMARELAASGIRV  176
            +  +  M+ ++  ++V   S +A   G   G +HY AAKAGV+GL ++MARE+++  IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NTLVPGPTNTPMMADI-PDEWLQGMLKAIPLGRMGEVDEIARAAVFLASSDASFITGQNL  235
            N++ PG  +T + +++  DE+ ++++ +IPLGR+G  +++A AA+FLAS  +S++TG  L
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  AVNGGM  241
             VNGGM
Sbjct  284  DVNGGM  289

324) Sput200_1599 in NC_017566


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

325) Sputcn32_1582 in NC_009438


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

326) Sputw3181_2440 in NC_008750


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

327) Rfer_4047 in NC_007908


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (538),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 105/247 (43%), Positives = 167/247 (68%), Gaps = 8/247 (3%)

Query  6    LLNKVSLITGAA--QGIGLATALKFAAEGAIVIVCDIKQAGVDEAVAQCRALGATAAGFV  63
            L  K+++ITGAA  +GIG ATA+ FA +GA V++ D+ +++  +A A   +LG    G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLGLA  102

Query  64   ADVTQRTTIDALVASVKAQFGRIDVLVNNAGITQDARLQKMTLEQFDRVIDVNLRGVFHC  123
            A+V++ + +   VA++  +FGRIDVLVNNAGITQ  +   +   ++D+V+DV+LRG +  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  AQAVADLMVAQGSGVILNASSVVGIYGN--FGQTNYAATKFGVIGFTKTWSRELGPKGIR  181
            +QAV   M AQGSG I+  SSV +  G   FG  +Y+A+K GV+G+ K+ +RE+GP  IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  182  VNAVAPGFITTPMVAA-MPEKVLQDLQAKVPLKRLGKPEEIANVYAFLASDEASYINGAV  240
            +N++APG+I T + ++ M +   + +   +PL RLG ++++AN   FLASD +SY+ G  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  241  IEVSGGM  247
            ++V+GGM
Sbjct  283  LDVNGGM  289

328) Slin_0401 in NC_013730


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (538),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 104/247 (43%), Positives = 166/247 (68%), Gaps = 7/247 (2%)

Query  1    MRLQNKVAIITGAA--RGIGQAAAEVFCREGATVIIWDLLNEGEATAQSLRNQGFACTFQ  58
            M LQ K+AIITGAA  RGIG+A+A  F ++GA V+I DL + +   A +   +G      
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   HVSTTDVPGIEAAARSVHEQYGRIDILINNAGITRDKTLLKMSFADWQQVIDVNLTGVFN  118
            +V  +D + +  A  ++ E++GRID+L+NNAGIT+    L +  +D ++V+DV+L G + 
Sbjct  104  NV--ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CTKVVAPYMVEQKYGRIICTSSINGVHGA--FGQTNYAAAKAGIIGMVRSWAKELGPKGI  176
             ++ V P M  Q  G I+C SS+++ +G+  FG  +Y+AAKAG++G+ ++ A+E+GP  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  177  TANAVAPGFIQTAMTDA-MPDEVRNQAVATIPVRRIGKPEDIANAYLFLASDEASFVNGH  235
              N++APG+I+T +T++ M DE R+  +  IP+ R+G ++D+ANA LFLASD +S++ G 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  236  VLSVNGG  242
             L VNGG
Sbjct  282  TLDVNGG  288

329) HPL003_10165 in NC_016641


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (538),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 106/257 (42%), Positives = 170/257 (67%), Gaps = 23/257 (8%)

Query  1    MMLLEGRVAVVTGAS--RGIGKSIALTLAKQGASLVINGTREDLLLDLAA-----EVNAL  53
            +MLL+G++A++TGA+  RGIG++ A+T+A++GA +VI        LDL          +L
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI--------LDLDESAARDAAATL  94

Query  54   GQTCVVCAGDVSDKEIAQQVVRTTIEHFGCIDILVNNAGINMRTSTLAMDTKDWEKVLDV  113
            G+  +  A++V+D    +Q V T IEHFG ID+LVNNAGI     TL +   D +KVLDV
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDV  154

Query  114  NLNGTLYLCMAVLPHMIEKNYGKIVNVTSTTAKTPHRN----AAPSYGASKAGVNYLTQH  169
            +L GTL +  AV+P M  +  G IV ++S +A   +R     ++P Y+A+KAGV  L + 
Sbjct  155  SLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSA---QRGGGIFGGPHYSAAKAGVLGLGKA  211

Query  170  LALEMAKHNIYVNAVCPGPIDTDMSKQWTQEYRQEAIAR-IPLGKLGTPENVADTVLFLA  228
            +A E + ++I +N++ PG I+TD++    Q+ R++AI   IPLG+LG++++VA++ LFLA
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLA  271

Query  229  SKMSDFITGESININGG  245
            S +S ++TG ++++NGG
Sbjct  272  SDLSSYLTGITLDVNGG  288

330) fabG in NC_006840


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (538),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRSIAELLVSRGATVIGTATSEGGAAAISEYLGENGKGLA  58
            +M L+GKIA++TGA+  RGIGR+ A  +  +GA V+     E++A   +  LGE   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVESIESVLKSINDEFGAIDILVNNAGITRDNLLMRMKDDEWTDIMDTNLTSIFRL  118
             NV+D   +   + +I ++FG ID+LVNNAGIT+    + ++ ++   ++D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRNGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRAATLSAVPAGRLGDPKEIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A + ++P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

331) fabG in NC_014355


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 107/251 (43%), Positives = 174/251 (70%), Gaps = 8/251 (3%)

Query  1    MSLQGKVAIVTGGA--QGIGRAIAEALAEDGADIAVADLDPARSQDAVAAIQKLGRRALS  58
            M LQGK+AI+TG+A  +GIGRA A ++A++GA + + DLD + ++DA A+   LG   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT---LGEGHLG  100

Query  59   VKVNVADWNDAKAMADQVMQEWGKIDILVNNAGITRDGLLLRMKEEDWNLVLQVNLNGTF  118
            +  NVAD ++ K     ++++ G+ID+LVNNAGIT+    L ++  D + VL+V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  HCTKAVLLPMTKQRYGRIVNIASIVGAMGN--VGQANYAASKAAVIGFTKTVAREYASRA  176
              ++AV+  M  Q  G IV ++S+ +  G    G ++Y+A+KA+V+G+ K++ARE+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VTVNAVAPGFIDTAMTQGLSPEV-KEALQKQIPLGRLGLPSDIAAAVRFLVSDAASYITG  235
            + +N++APG+I+T +T GL  +  ++A+   IPLGRLG + D+A A  FL SD +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  QVLHVNGGMLM  246
              L+VNGGML+
Sbjct  281  ITLDVNGGMLI  291

332) Sbal175_2621 in NC_017571


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEEQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +++++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

333) Sbal117_1832 in NC_017579


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEEQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +++++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

334) Sbal_1719 in NC_009052


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEEQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +++++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

335) Shew185_1716 in NC_009665


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEEQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +++++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

336) Sbal195_1759 in NC_009997


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEEQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +++++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

337) Sbal223_2573 in NC_011663


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEEQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +++++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

338) Sbal678_1798 in NC_016901


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESVTHLFASIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSLFRLSKP  124
            +D   V +  A+I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEEQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +++++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

339) fabG in NC_008726


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 7/246 (2%)

Query  9    LLTGQTAVITGGA--QGLGFAIAQRFVEEGARVVLGDVNLDATVAAAEKLGGEDVARAVR  66
            LL G+ A+ITG+A  +G+G A A  F ++GARVV+ D++  A+  AA  LG  +++ A  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  67   CDVTDSAEVDALIAAAVDGFGSLDIMVNNAGITRDATMRKMTEEQFDQVIAVHLKGTWNG  126
             +V+D ++V   +A+ ++ FG +D++VNNAGIT+      +   ++D+V+ V L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  127  LRAAAAVMREQKRGAIVNMSSISGK--VGMVGQTNYSAAKAGIVGMTKAASKELAYLGVR  184
             +A  + MR Q  G+IV MSS+S++   G+ G  +YSAAKAG++G+ KA ++E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  185  VNAIQPGLIRSAMTEA-MPQRIWDSKVAEVPMGRAGEPEEVANVALFLASDLSSYMTGTV  243
            +N+I PGLI++ +T + M +  +++ +  +P+GR G +++VAN ALFLASDLSSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  244  LEVTGG  249
            L+V GG
Sbjct  283  LDVNGG  288

340) fabG in NC_004603


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 170/246 (70%), Gaps = 5/246 (2%)

Query  1    MNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLAL  58
            M L+GKIA++TGA+  RGIGRA A  + ++GA V+     E++A   +  LGE   GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDVESIEATLKAINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRMS  118
            NV+D   +  ++ +I ++FG ID+LVNNAGIT+    + ++ ++ + +++ +L     MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRGMMKKRAGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVTV  176
            +AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NTVAPGFIETDMTKAL-NDDQRAATLANVPAGRLGDPREIASAVVFLASPEAAYITGETL  235
            N++APG+I+TD+T +L +D++R A +  +P GRLG ++++A+A +FLAS  ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

341) MAV_1572 in NC_008595


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  146 bits (537),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 170/248 (69%), Gaps = 7/248 (2%)

Query  1    MSLLSGQTAVITGGA--QGLGFAIAERFVAEGARVVLGDVNLEATQTAAKQLGGDQVALA  58
            + LL G+ A+ITG+A  +G+G A A  F  +GARVV+ D++  A++ AA  LG ++++LA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   VRCDVTKSSEVETLIQTAVERFGGLDIMVNNAGITRDATMRKMTEEQFDQVIAVHLKGTW  118
               +V+  S+V   + T +E+FG +D++VNNAGIT+      +   ++D+V+ V L+GT 
Sbjct  103  A--NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NGTRLAAAIMRENKRGAIINMSSVSGK--VGMVGQTNYSAAKAGIVGMTKAAAKELAYLG  176
              ++   + MR +  G+I+ MSSVS++   G+ G  +YSAAKAG++G+ KA A+E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAIAPGLIRSAMTEA-MPQRIWDSKVAEVPMGRAGEPSEVASVALFLASDMSSYMTG  235
            +R+N+IAPGLI++ +T + M +  +++ +  +P+GR G + +VA+ ALFLASD+SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  TVMEITGG  243
              +++ GG
Sbjct  281  ITLDVNGG  288

342) Shewana3_2558 in NC_008577


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 168/244 (69%), Gaps = 5/244 (2%)

Query  7    LAGKVALVTGAS--RGIGRAIAETLVEAGAIVVGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA VV     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSQSVTDLFDSIKEKAGDVDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTSLFRLSKP  124
            +D   V +   +I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

343) Shewmr4_2396 in NC_008321


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 168/244 (69%), Gaps = 5/244 (2%)

Query  7    LAGKVALVTGAS--RGIGRAIAETLVEAGAIVVGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA VV     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSQSVTDLFDSIKEKAGDVDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTSLFRLSKP  124
            +D   V +   +I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

344) Shewmr7_2466 in NC_008322


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 168/244 (69%), Gaps = 5/244 (2%)

Query  7    LAGKVALVTGAS--RGIGRAIAETLVEAGAIVVGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA VV     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSQSVTDLFDSIKEKAGDVDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTSLFRLSKP  124
            +D   V +   +I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

345) Hhal_1233 in NC_008789


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (534),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 103/247 (42%), Positives = 171/247 (70%), Gaps = 8/247 (3%)

Query  7    LQGQIALVTGAS--RGIGRAVLEALGQAGATVIGTATSDQGAEAIRQRLAEAGLQGTGMA  64
            LQG+IA++TGA+  RGIGRA   +++Q GA V+     + +A      L+E+ L   G+A
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  65   LDVTDSEQVGEVVTAIGRDFGAPTILVNNAGITRDNLLMRMKDDEWDQIIDTNLSSVYRM  124
             +V+D  QV + V++I  +FG   +LVNNAGIT+    + ++ ++ D+++D +L +   M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  125  SKACLRGMMKARGGRIINIGSVVGAMGNA--GQANYSAAKAGIMGLTKSMARELGARNIT  182
            S+A +  M    +G I+ ++SV +  G +  G ++YSAAKAG++GL K+MARE+G+ +I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  183  VNTVAPGFIETDMTAA-MSEDQRAALIGNVPLERLGSPEDIAAAVTFLASPSAGYITGET  241
            +N++APG+I+TD+T++ M +++R A+I  +PL RLG+++D+A A  FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  242  LHVNGGM  248
            L+VNGGM
Sbjct  283  LDVNGGM  289

346) fabG in NC_016776


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (532),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 109/250 (44%), Positives = 172/250 (69%), Gaps = 11/250 (4%)

Query  3    LLDGKTAIVTGAA--RGIGKAIALKFASEGANIAFTDLVIDENAQNTAKEIEA-MGVKAK  59
            LL+GK AI+TGAA  RGIG+A A+ FA +GA + + DL      +++A++  A +G    
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL-----DESAARDAAATLGEGHL  99

Query  60   GYASNAANFEDTAKVVEEIHKDFGRIDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSA  119
            G A+N A+  +  + V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L+++
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  FNFVHACTPIMMRQKAGSIINMASVVGVHGNA--GQANYSASKAGMIGLAKSIAQELGSR  177
            +   +A  P M  Q +GSI+ M+SV + +G +  G ++YSA+KAG++GL+K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GIRANAIAPGFIITDMTAGL-SEEVKTEWAKKIPLRRGGTPEDVANIATFLASDMSSYVS  236
             IR N+IAPG+I TD+T+GL  +E +      IPL R G+++DVAN A FLASD+SSY++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIQVDGGM  246
            G  ++V+GGM
Sbjct  280  GITLDVNGGM  289

347) fabG in NC_003228


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (532),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 109/250 (44%), Positives = 172/250 (69%), Gaps = 11/250 (4%)

Query  3    LLDGKTAIVTGAA--RGIGKAIALKFASEGANIAFTDLVIDENAQNTAKEIEA-MGVKAK  59
            LL+GK AI+TGAA  RGIG+A A+ FA +GA + + DL      +++A++  A +G    
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL-----DESAARDAAATLGEGHL  99

Query  60   GYASNAANFEDTAKVVEEIHKDFGRIDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSA  119
            G A+N A+  +  + V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L+++
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  FNFVHACTPIMMRQKAGSIINMASVVGVHGNA--GQANYSASKAGMIGLAKSIAQELGSR  177
            +   +A  P M  Q +GSI+ M+SV + +G +  G ++YSA+KAG++GL+K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GIRANAIAPGFIITDMTAGL-SEEVKTEWAKKIPLRRGGTPEDVANIATFLASDMSSYVS  236
             IR N+IAPG+I TD+T+GL  +E +      IPL R G+++DVAN A FLASD+SSY++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIQVDGGM  246
            G  ++V+GGM
Sbjct  280  GITLDVNGGM  289

348) BF4118 in NC_006347


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (532),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 109/250 (44%), Positives = 172/250 (69%), Gaps = 11/250 (4%)

Query  3    LLDGKTAIVTGAA--RGIGKAIALKFASEGANIAFTDLVIDENAQNTAKEIEA-MGVKAK  59
            LL+GK AI+TGAA  RGIG+A A+ FA +GA + + DL      +++A++  A +G    
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL-----DESAARDAAATLGEGHL  99

Query  60   GYASNAANFEDTAKVVEEIHKDFGRIDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSA  119
            G A+N A+  +  + V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L+++
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  FNFVHACTPIMMRQKAGSIINMASVVGVHGNA--GQANYSASKAGMIGLAKSIAQELGSR  177
            +   +A  P M  Q +GSI+ M+SV + +G +  G ++YSA+KAG++GL+K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GIRANAIAPGFIITDMTAGL-SEEVKTEWAKKIPLRRGGTPEDVANIATFLASDMSSYVS  236
             IR N+IAPG+I TD+T+GL  +E +      IPL R G+++DVAN A FLASD+SSY++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIQVDGGM  246
            G  ++V+GGM
Sbjct  280  GITLDVNGGM  289

349) fabG in NC_011312


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 105/247 (43%), Positives = 169/247 (69%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAEQLVSCGATVIGTATSENGAAAIGDYLGENGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  +   GA V+     E++A   +  LGE   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDAESIAAVLKTINDEFGAIDILVNNAGITRDNLLMRMKDDEWMDILDTNLTSIFRL  118
             NV+D   +   + TI ++FG ID+LVNNAGIT+    + ++ ++   +LD +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRNGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGIT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDEQRAATLSSVPAGRLGDPKEIAAAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +DE+R A + ++P GRLG ++++A A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

350) fabG in NC_004347


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 168/244 (69%), Gaps = 5/244 (2%)

Query  7    LAGKVALVTGAS--RGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSQSVTDLFDSIKEKAGDVDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTSLFRLSKP  124
            +D   V +   +I E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIINIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQQK-AIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+++ AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

351) fabG in NC_005824


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 176/248 (71%), Gaps = 10/248 (4%)

Query  4    LKGKNAVVTGAA--RGIGKSTALTLAKAGANLVIADLNEESSKATADEISKQTGVKAIGI  61
            L+GK A++TGAA  RGIG++TA+T+A+ GA +VI DL+E +++ +A  +    G   +G+
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  62   GTNVSDVDSAAKAIQACVDEFGSVDILVNNAGITKDTLLMRMKKEQWDAVIAVNLTGTFN  121
            ++NV+D     +A+ + +++FG +D+LVNNAGIT+    + ++  + D V+ V+L GT+ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  CTQAAIKFMMKNPNGGSIINLSSIAGVNGN--IGQTNYSASKAGVIGFTKAVALEMASRK  179
             +QA I   M+   +GSI+ +SS+++  G   +G  +YSA+KAGV+G+ KA+A E ++ +
Sbjct  162  MSQAVIP-TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  VRCNAIAPGFIATEMTDAI-PEKIRTAMVAAIPLKRAGQPEDIANTIAFLASDISSFITG  238
            +R N+IAPG+I T++T+++  +  R A++ +IPL R G ++D+AN+  FLASD+SS++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVIEVNGG  246
              ++VNGG
Sbjct  281  ITLDVNGG  288

352) LB_082 in NC_004343


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 176/248 (71%), Gaps = 10/248 (4%)

Query  4    LKGKNAVVTGAA--RGIGKSTALTLAKAGANLVIADLNEESSKATADEISKQTGVKAIGI  61
            L+GK A++TGAA  RGIG++TA+T+A+ GA +VI DL+E +++ +A  +    G   +G+
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  62   GTNVSDVDSAAKAIQACVDEFGSVDILVNNAGITKDTLLMRMKKEQWDAVIAVNLTGTFN  121
            ++NV+D     +A+ + +++FG +D+LVNNAGIT+    + ++  + D V+ V+L GT+ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  CTQAAIKFMMKNPNGGSIINLSSIAGVNGN--IGQTNYSASKAGVIGFTKAVALEMASRK  179
             +QA I   M+   +GSI+ +SS+++  G   +G  +YSA+KAGV+G+ KA+A E ++ +
Sbjct  162  MSQAVIP-TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  VRCNAIAPGFIATEMTDAI-PEKIRTAMVAAIPLKRAGQPEDIANTIAFLASDISSFITG  238
            +R N+IAPG+I T++T+++  +  R A++ +IPL R G ++D+AN+  FLASD+SS++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVIEVNGG  246
              ++VNGG
Sbjct  281  ITLDVNGG  288

353) fabG in NC_017552


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 176/248 (71%), Gaps = 10/248 (4%)

Query  4    LKGKNAVVTGAA--RGIGKSTALTLAKAGANLVIADLNEESSKATADEISKQTGVKAIGI  61
            L+GK A++TGAA  RGIG++TA+T+A+ GA +VI DL+E +++ +A  +    G   +G+
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  62   GTNVSDVDSAAKAIQACVDEFGSVDILVNNAGITKDTLLMRMKKEQWDAVIAVNLTGTFN  121
            ++NV+D     +A+ + +++FG +D+LVNNAGIT+    + ++  + D V+ V+L GT+ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  CTQAAIKFMMKNPNGGSIINLSSIAGVNGN--IGQTNYSASKAGVIGFTKAVALEMASRK  179
             +QA I   M+   +GSI+ +SS+++  G   +G  +YSA+KAGV+G+ KA+A E ++ +
Sbjct  162  MSQAVIP-TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  VRCNAIAPGFIATEMTDAI-PEKIRTAMVAAIPLKRAGQPEDIANTIAFLASDISSFITG  238
            +R N+IAPG+I T++T+++  +  R A++ +IPL R G ++D+AN+  FLASD+SS++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVIEVNGG  246
              ++VNGG
Sbjct  281  ITLDVNGG  288

354) fabG in NC_014103


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  145 bits (532),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 103/254 (41%), Positives = 170/254 (67%), Gaps = 14/254 (5%)

Query  1    MRLKDKVAIITGAAN--GLGFEASRIFAQEGAKVAMVDYDAKTGEERAAQLKEEGGDVAF  58
            M L++K+AIITGAA+  G+G  ++  FAQ+GA+V ++D D  ++ + AA L E  G++++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGL  101

Query  59   FQVNVADRDSVDAMVEEVVKHYSKIDILINNAGITRDGMLTKLSVENFQAVINVNLTGVF  118
               NVAD   V   V  ++ H+++ID+L+NNAGIT+      +   +++ V++V+L G +
Sbjct  102  -AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  HCTQAVVPHMIAQGKGKIISTSSVS-----GVYGNVGQTNYAATKAGVVGMTKTWAKELG  173
              +QAV+P M AQG G I+  SSVS     G++G     +Y+A+KAGV+G+ K+ A+E+G
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMAREFG  217

Query  174  RKGINVNAVAPGFIETDMVKA-MPDKIIDQMKSTIPLQRLGQPSDIGYAYLYLASDESNY  232
               I +N++APG+I+TD+  + M D   + +   IPL RLG + D++ A L+LASD S+Y
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  233  INGTTLHVDGGIMM  246
            + G TL+V+GG+++
Sbjct  278  LTGITLDVNGGMLI  291

355) Lcho_1203 in NC_010524


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (530),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 112/253 (45%), Positives = 163/253 (65%), Gaps = 11/253 (4%)

Query  2    TIAIVTGAAD--GIGWATAQRFAAGGARVVLADLRGESARERAAELGAAHIGLACDVTSE  59
             IAI+TGAA   GIG+ATA  FA  GARVV+ DL   +AR+ AA LG +H+GLA +V+ E
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  60   ASVISLVEQVLSQCGRIDVLVNNAGIGDQGGATVDQRLDAFDRVLGVHLRGTFLMSREVA  119
            + V   V  ++ + GRIDVLVNNAGI  Q   T+D R + +D+VL+V LRGT+LMS+ V 
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGI-TQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  120  RVMLAQAPLEGPHGCRgaivniasivasagiPGRNAYGAAKAGIVGMTKAMAVEWGLAGV  179
              M AQ++  G+  C +++    +        G   Y+AAKAG++G+ KAMA E G   +
Sbjct  168  PTMRAQGS--GSIVCMSSVSAQRGGGIF----GGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  RVNAVAPGYVRTALVEKLQAEGLLNTDAIHARTPMGRMGAPAEIAEAIAFLASPQASYIT  239
            R+N++APG ++T +   L  +     +AI    P+GR+GA+ ++A+A  FLAS  +SY+T
Sbjct  222  RINSIAPGLIHTDITGGLMQDE--RRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  240  GSVLQVDGGWIAH  252
            G  L+V+GG + H
Sbjct  280  GITLDVNGGMLIH  292

356) fabG in NC_014371


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (530),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 109/251 (44%), Positives = 173/251 (69%), Gaps = 9/251 (3%)

Query  1    MKLLEGKTALITGAA--RGIGKAIALKFAEEGANVAFTDLVIDENGKATEAEIAAFGVKA  58
            + LL+GK A+ITGAA  RGIG+A A+ FA++GA V + DL    +  A+    A++G   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL----DESAARDAAATLGEGH  98

Query  59   KGYASNAADFAQSeevvkqvkeeFGSIDILINNAGITKDGLMLRMTEQQWDAVIAVNLKS  118
             G A+N AD +Q  + V  + E+FG ID+L+NNAGIT+    L +   + D V+ V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNFIHACVPVMMRQRGGSIINMASVVGVHGNA--GQANYSASKAGMIALAKSVAQEMGP  176
            ++   +A +P M  Q +GSI+ M+SV + +G +  G ++YSA+KAG+++L+K++A+E GP
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  KGIRANAIAPGFIDTAMTQAL-DDDIRKEWTSKIPLRRGGTVEDVANTAVYLGSELSSYV  235
              IR N+IAPG+I+T +T +L +D+ R      IPL R G+ +DVAN+A++L+S+LSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVIQVDGGM  246
            TG  ++V+GGM
Sbjct  279  TGITLDVNGGM  289

357) swp_3045 in NC_011566


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 107/244 (44%), Positives = 166/244 (69%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAVAETLVSAGAVVIGTATSERGAEAIQAYLGDNGHGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+   GA V+     E +A    A LG+   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDGDSVKALFATIKEKAGDVDILVNNAGITRDNLLMRMKDDEWQDIVDTNLTSLFRTSKA  124
            +D   VK   ATI E  G +D+LVNNAGIT+    + ++ ++ + ++D +L + +  S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRPMMKKRHGRIINIGSVVGTMGNA--GQTNYAAAKAGLIGFTKSLAREVASRQITVNA  182
            V+  M  +  G I+ ++SV +  G +  G  +Y+AAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQ-QQAIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+ ++AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

358) D521_0217 in NC_020417


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 107/251 (43%), Positives = 170/251 (68%), Gaps = 16/251 (6%)

Query  3    MRLKDKVAIITGAA--KGIGFATAKRFAQEGAKVMIADVNPEAVK-AAVDLIPGSEAYVM  59
            M L++K+AIITGAA  +GIG ATA  FAQ+GA+V+I D++  A + AA  L  G  +   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  60   NVTDRASVEAAVDQIMQRHGRIDILINNAGITQDARLVKMTEAQFDAVIDVNLKGVFNCT  119
            NV+D + V  AV  I+++ GRID+L+NNAGITQ  + + +  +++D V+DV+L+G +  +
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  120  QLVVPHMLEAGKGAVVNASSVVGIYGN--FGQTNYSATKFGVIGFTKTWARELGAKGIRV  177
            Q V+P M   G G++V  SSV +  G   FG  +YSA+K GV+G+ K+ ARE+G+  IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  178  NAVCPGFIATEMVKAMPENILKDIERRS------WLGRLGTPEEMANVYLFLASDEAGYV  231
            N++ PG+I T++  ++ ++     ERR        LGRLG+++++AN  LFLASD ++Y+
Sbjct  224  NSIAPGLIHTDITGGLMQD-----ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  232  NGVALEASGGI  242
             G++L+ +GG+
Sbjct  279  TGITLDVNGGM  289

359) Thena_1434 in NC_015499


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 109/254 (43%), Positives = 175/254 (69%), Gaps = 16/254 (6%)

Query  1    MTLEGKVAIVTGSS--RGIGKAIAKAFAVEGAKVLI---NYASNDEAAKKIKEELVSMGC  55
            M L+GK+AI+TG++  RGIG+A A +FA +GA+V+I   + ++  +AA  + E  ++++ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA-  102

Query  56   TVEIFKASVEKESEVKALFEQVDTLFGRIDILVNNAGITRDALILRMTESQWDEVIDVNL  115
                  A+V  ES+VK     +   FGRID+LVNNAGIT+    L +  ++ D V+DV+L
Sbjct  103  ------ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  116  KAAFLCSKEAAKRMIKQKSGRIINISSVIGQIGNP--GQANYSASKSGLFGLTKSLAKEL  173
            ++++L S+     M  Q SG I+ +SSV +Q G    G ++YSA+K+G++GL K++A+E+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  174  GSRGILVNSIAPGYIVTDMTSGL-SDEIRNKLLSSIALGRLGTPEDVAEVALWLANS-AN  231
            G+  I +NSIAPG I TD+T+GL  DE R+ ++ +I+LGRLG+++DVA+ AL LA+  ++
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  232  YVTGQIISVNGGMF  245
            Y+TG  + VNGGM+
Sbjct  277  YLTGITLDVNGGML  290

360) Cyan10605_1563 in NC_019776


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 103/254 (41%), Positives = 176/254 (70%), Gaps = 19/254 (7%)

Query  12   LKEQVAIVTGAS--RGIGKATAIALAEEGAKVVI---NYANSSQSAEELVKDIIDAGGDA  66
            L+ ++AI+TGA+  RGIG+ATA+++A++GA+VVI   + + + ++A  L       G + 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-------GEGH  98

Query  67   IAVQGDVSQQEQVEAMIKTTTDKWGRIDILVNNAGITRDTLMLRMKLEDWQKVIDLNLTG  126
            +++ ++V+++ QV   + T  +  GRID+LVNNAGIT+    L ++  D +KV+D++L G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  127  VFLCCKAVSKIMLKQRSGRIINISSVAGQMGNP--GQANYSAAKAGVIGFTKTLAKEFAS  184
             +L  +AV   M  Q SG I+ +SSV++Q G    G ++YSAAKAGV+G+ K++A+EF++
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  185  RGVTVNAVAPGFIETDMTSGLEAEE----ILKAIPLNRYGKPEEIAGMIRFLAADTASSY  240
              + +N++APG+I+TD+T+GL  +E    I+ +IPL R G ++++A    FLA+D  SSY
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDL-SSY  277

Query  241  ITGQVFNVDGGMVM  254
            +TG  ++V+GGM++
Sbjct  278  LTGITLDVNGGMLI  291

361) Dester_1016 in NC_015185


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (529),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 99/245 (41%), Positives = 169/245 (69%), Gaps = 7/245 (2%)

Query  4    LKGKVVLVTGGT--RGIGRAIAERFKEVGATVYITGTNEERTKNVAEEIGVN--GVKMNV  59
            L+GK+ ++TG++  RGIGRA A  F + GA V I + +E  +++ A  +G    G+  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  60   TDREEVKKVVAEILEKEGQLDVLINNAGITKDTLFLRMKDEDWDSVIDTNLNGVYNVTRA  119
            +D  +VK+ VA I+E  G++DVL+NNAGIT+    L ++  D D V+D +L G   +++A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  120  VVPAMIKKKAGNIINISSVVGFTGN--IGQVNYSATKSALVGFTKSLAKELGSRGIRVNC  177
            V+P+M  + +G+I+ +SSV +  G   +G  +YSA+K++++G+ K++A+E+G+  IR+N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  178  IAPGYITTDMTEKI-PEKIKQELIKSIPLKREGNPREIADVCLFLASDMASYITGTVIHV  236
            IAPG I TD+T  +  +  ++ +I +IPL R G ++++A+  LFLASD++SY+TG  ++V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  237  NGGLF  241
            NGG++
Sbjct  286  NGGML  290

362) fabG in NC_022223


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSESGAAAISEYLGNNGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     ES+A   +  LG+   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVESIATTLKIINDEFGVIDILVNNAGITRDNLLMRMKDDEWSDIIDTNLTSIFRL  118
             NV+D   +  ++  I ++FG ID+LVNNAGIT+    + ++ ++   ++D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRNGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRTATLAQVPAGRLGDPREIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

363) VAA_03343 in NC_015633


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSESGAAAISEYLGNNGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     ES+A   +  LG+   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVESIATTLKIINDEFGVIDILVNNAGITRDNLLMRMKDDEWSDIIDTNLTSIFRL  118
             NV+D   +  ++  I ++FG ID+LVNNAGIT+    + ++ ++   ++D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRNGRIINVGSVVGTMGNA--GQTNYAAAKAGVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +  G  +Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRTATLAQVPAGRLGDPREIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

364) Intca_0379 in NC_014830


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 106/246 (44%), Positives = 173/246 (71%), Gaps = 6/246 (2%)

Query  4    LEGKIAIVTGAA--RGLGRGIAERLAAEGAVVVVTDVNADGAQQTATELGGSALGLGCDV  61
            L+GKIAI+TGAA  RG+GR+ A  +A +GA VV+ D++  +A+++A+ LG + LGL+ +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   SDYGSVAAMVADVKDRFGRVDVLVNNAGWDKAAPFLDLDQDLWPKIIGINLYGVLNTMKA  121
            +D + V   VA + ++FGR+DVLVNNAG  ++   LD+  +   K+++++L G L   +A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  122  VLPIMAEQGSGSVVNISSDAGRVGSS--GEAVYSAAKGGVIAFTKSTAREMARKQVRVNV  179
            V+P M  QGSGS+V +SS +++ G++  G + YSAAK+GV+++ K+ ARE +  Q+R+N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  180  ICPGPSDTQLFAEFAGDNQGLRDALTKAIPLRRLGQPSDVAGAVAYFASDDSVYVTGQTL  239
            I PG  +T++ + +  D++  R+A+  +IPL RLG + DVA A  ++ASD S Y+TG TL
Sbjct  226  IAPGLIHTDITGGLMQDER--RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  240  SISGGL  245
             ++GG+
Sbjct  284  DVNGGM  289

365) Vpar_0699 in NC_013520


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (528),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 177/252 (71%), Gaps = 9/252 (3%)

Query  1    MHLEGKVAIVTGAS--RGIGRAVAINLAQSGADVVVNYSGSEGAAQETVEAVQALGRkai  58
            M L+GK+AI+TGA+  RGIGRA A+ +AQ GA VV+     E+AA+++  +   LG   +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAAT---LGEGHL  99

Query  59   kikanvanaDEVASMVEEAHKEFGHIDILVNNAGITRDGLLMRMKDEDFDAVIDINLKGV  118
             + ANVA+  +V   V     +FG+ID+LVNNAGIT+    + ++  D+D V+D++L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  YLVTKAVSKIMMKQRSGHIINMTSVVGVIGNA--GQTNYAASKAGVIGFTKSCAKELASR  176
             L+++AV   M  Q SG I+ M+SV +  G +  G  +Y+A+KAGV+G+ K+ A+E+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GITVNAIAPGFINTDMT-DVLPEKVKEAMVTQIPLGRMADAEEVATVATFLASDFANYIT  235
             I +N+IAPG+I+TD+T +++ +  ++A++  IPLGR++ A++VA  A FLASD+++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQVINVDGGMVM  247
            G  ++V+GGM++
Sbjct  280  GITLDVNGGMLI  291

366) CL3_09780 in NC_021024


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 104/251 (42%), Positives = 175/251 (70%), Gaps = 11/251 (4%)

Query  1    MLLEGKIALVTGAS--RGIGRQIALTLAKEGA-VVIVNYNGSAAKAEEVVKEITEAGGTA  57
            MLL+GKIA++TGA+  RGIGR  A+T+A++GA VVI++ + SAA+        +  G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA-----ATLGEGH  98

Query  58   EAVQCSVSDYAKTEEMMKDLIARYKRIDILVNNAGITKDNLLMKMSEEEYDAVLDTNLKG  117
             ++  +V+D ++  + +  +I ++ RID+LVNNAGIT+    + +   +YD VLD +L+G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  118  TFNCIKHVSRQMLKQKGGRIINISSVSGVMGNA--GQANYCASKAGVIGLTKSVARELGS  175
            T+   + V   M  Q +G I+ +SSVS+  G +  G ++Y A+KAGV+GL K++ARE+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RGITVNAIAPGFIDTEMT-AVLPEDVKKSMGEQIPMKKFGKTEDVANLAAFLASDLAGYI  234
              I +N+IAPG+I+T++T +++ ++ + ++ E IP+ ++G ++DVAN A FLASDL++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQIIGVDGGM  245
            TG  ++V+GGM
Sbjct  279  TGITLDVNGGM  289

367) CLS_01800 in NC_021047


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 104/251 (42%), Positives = 175/251 (70%), Gaps = 11/251 (4%)

Query  1    MLLEGKIALVTGAS--RGIGRQIALTLAKEGA-VVIVNYNGSAAKAEEVVKEITEAGGTA  57
            MLL+GKIA++TGA+  RGIGR  A+T+A++GA VVI++ + SAA+        +  G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA-----ATLGEGH  98

Query  58   EAVQCSVSDYAKTEEMMKDLIARYKRIDILVNNAGITKDNLLMKMSEEEYDAVLDTNLKG  117
             ++  +V+D ++  + +  +I ++ RID+LVNNAGIT+    + +   +YD VLD +L+G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  118  TFNCIKHVSRQMLKQKGGRIINISSVSGVMGNA--GQANYCASKAGVIGLTKSVARELGS  175
            T+   + V   M  Q +G I+ +SSVS+  G +  G ++Y A+KAGV+GL K++ARE+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RGITVNAIAPGFIDTEMT-AVLPEDVKKSMGEQIPMKKFGKTEDVANLAAFLASDLAGYI  234
              I +N+IAPG+I+T++T +++ ++ + ++ E IP+ ++G ++DVAN A FLASDL++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQIIGVDGGM  245
            TG  ++V+GGM
Sbjct  279  TGITLDVNGGM  289

368) fabG in NC_016001


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 106/254 (42%), Positives = 177/254 (70%), Gaps = 13/254 (5%)

Query  1    MKLLEGKTAIITGAS--RGIGKGIAEIFAKNGANIAFTYSSSAASAQELENELN--QLGI  56
            + LL+GK AIITGA+  RGIG++ A  FA++GA + +      ++A++    L   +LG+
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATLGEGHLGL  101

Query  57   KAKGYQSNAADFNEAQTFVEAVLAEFGNIDILINNAGITKDNLLMRMTENDFDQVIDVNL  116
             A     N AD ++ +  V +++ +FG ID+L+NNAGIT+    + +   D+D+V+DV+L
Sbjct  102  AA-----NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  117  KSVFNMTKAVQKTFLKNRKGSIINMSSVVGVKGNA--GQTNYAASKAGVIGFTKSIALEL  174
            ++ + M++AV  T   +  GSI+ MSSV + +G +  G  +Y+A+KAGV+G+ K++A E+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  175  GSRNIRCNAIAPGFIETEMTAKL-NEDVVQGWRDGIPLKRGGTTEDVANACLFFASDMSS  233
            G+ +IR N+IAPG+I+T++T+ L +++  ++  +GIPL R G+++DVANA LF+ASD+SS
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  234  FVTGQVLNVCGGML  247
            ++TG  L+V GGML
Sbjct  277  YLTGITLDVNGGML  290

369) Sden_2293 in NC_007954


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 102/244 (42%), Positives = 166/244 (69%), Gaps = 5/244 (2%)

Query  7    LEGKVALVTGAS--RGIGRAIAETLVDAGAVVIGTATSDKGAAAIQDYLGAKGFGLVLNV  64
            L+GK+A++TGA+  RGIGRA A T+ + GA V+     + +A      LG   +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDTQSVTDLFAQIKEKAGDVDILVNNAGITRDNLLMRMKDEEWQDIIDTNLTSLFKLSKP  124
            +D   V +  A I E  G +D+LVNNAGIT+    + ++  + + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRTMMKKRFGRIISIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ TM  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  VAPGFIQTDMTDELTPEQ-QQAIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            +APG+I+TD+T+ L  ++ ++AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

370) Sfri_1499 in NC_008345


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 101/244 (42%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  7    LDGKVALVTGAS--RGIGRAIAESLVQAGAMVIGTATSEKGAAAIQAYLGDKGFGMVLNV  64
            L+GK+A++TGA+  RGIGRA A ++ Q GA V+     E +A    A LG+  +G+  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSQSVADLYSQIKEKAGEVDILINNAGITRDNLLMRMKDDEWQDIIDTNLTSLFKLSKP  124
            +D   V +  + I E  G +D+L+NNAGIT+    + ++ ++ + ++D +L + + +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRSMMKKRFGRIISIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ +M  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTVEQ-QQAIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L  ++ ++AI+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

371) fabG in NC_002944


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (529),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 169/246 (69%), Gaps = 7/246 (2%)

Query  6    LLSGQTAVITGGA--QGLGFAIAERFVAEGARVVLGDVNLEATQTAAKQLGGDQVALAVR  63
            LL G+ A+ITG+A  +G+G A A  F  +GARVV+ D++  A++ AA  LG ++++LA  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  64   CDVTKSSEVETLIQTAVERFGGLDIMVNNAGITRDATMRKMTEEQFDQVIAVHLKGTWNG  123
             +V+  S+V   + T +E+FG +D++VNNAGIT+      +   ++D+V+ V L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  TRLAAAIMRENKRGAIINMSSVSGK--VGMVGQTNYSAAKAGIVGMTKAAAKELAYLGVR  181
            ++   + MR +  G+I+ MSSVS++   G+ G  +YSAAKAG++G+ KA A+E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  182  VNAIAPGLIRSAMTEA-MPQRIWDSKVAEVSMGRAGEPSEVASVALFLASDMSSYMTGTV  240
            +N+IAPGLI++ +T + M +  +++ +  +++GR G + +VA+ ALFLASD+SSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  241  MEITGG  246
            +++ GG
Sbjct  283  LDVNGG  288

372) AAur_4134 in NC_008711


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  144 bits (528),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 112/253 (45%), Positives = 169/253 (67%), Gaps = 10/253 (3%)

Query  6    RTAVLTGATSDRGIGLTTARRYANQGWGIVILDLDGEKSAKVAAEIANEFNVPAFGYEID  65
            + A++TGA+S+RGIG +TA  +A++G  +VILDLD   +   AA +++      +G   +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HLGLAAN  104

Query  66   vaseasvttaqaavaaevaaGNLPPVGALANIAGITSPVPFLETTLELWHKVMDVNATGT  125
            VA E+ V  A A++       ++  ++ L N AGIT P+  L+      +KV+DV+  GT
Sbjct  105  VADESQVKQAVATII-----EHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  126  YLVTKAFLPDMIANGWGRIVNMSSVSAQRGGGVFGKVPYSAAKAAILGFTKALAREIGET  185
             L+++A +P M A+G G IV MSSVSAQRGGG+FG   YSAAKA++LG+ KA+ARE+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  186  GVTVNAITPGAVDTNIRVG-STDEQEAAINAGIPLGRNATTEEVAAVITFLSSEDSAYLT  244
             + +N+I+PG ++T+I  G   DE+  AI  GIPLGR +++++VA    FL+S+ S+YLT
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  245  GTTIDINGGSHIH  257
            G T+D+NGG  IH
Sbjct  280  GITLDVNGGMLIH  292

373) fabG in NC_012971


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (527),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLACEVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++A E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

374) fabG in NC_012892


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (527),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLACEVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++A E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

375) fabG in NC_012947


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (527),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLACEVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++A E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

376) fabG in NC_012967


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (527),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++  + + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLACEVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G G  G ++Y+AAKAG++G++K++A E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

377) fabG in NC_008571


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (527),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 176/252 (70%), Gaps = 11/252 (4%)

Query  1    MKLLEGKNAIITGGS--RGIGKGIAEVFAKHGANVA-FTYNsssqsaeelakeleslGVK  57
            + LL+GK AIITG++  RGIG++ A  FA+HGA V  +  + S+      +     LG+ 
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  58   AKAYQSNAASFKESQDLVDKVVEEFGAIDIVINNAGITKDNLLMRMSEEDFDKVIEVNLK  117
            A+   ++ +  K++   V  ++E+FG ID+++NNAGIT+    + +   D+DKV++V+L+
Sbjct  103  ANV--ADESQVKQA---VATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  118  SIFNMTKAVQRTMLKQRSGSIINMSSVVGVTGNA--GQANYAASKAGIIGFSKSMAQELG  175
            + + M++AV  TM  Q SGSI+ MSSV +  G +  G ++Y+A+KAG++G++K+MA+E+G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  SRNIRTNVIAPGFIETEMTEKL-DEKTVQGWRDAIPLKRGGSPEDIANACVYLGSDLSSY  234
            + +IR N IAPG+I+T++T  L ++   ++  ++IPL R G+++D+ANA ++L+SDLSSY
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VTGQVIHVDGGM  246
            +TG  ++V+GGM
Sbjct  278  LTGITLDVNGGM  289

378) fabG in NC_014228


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 172/248 (70%), Gaps = 5/248 (2%)

Query  1    MSFDGKIALVTGAS--RGIGRAIAELLSERGACVIGTATSEKGAEAISTYLGDKGKGFVL  58
            M ++GKIA++TGA+  RGIGRA A  ++++GA V+     E +A   ++ LG+   G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSESIENVLSNIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDIVDTNLSSIFRLS  118
            NV+D   + + ++ I  +FG ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRSMMKKRYGRIISIGSVVGTMGNA--GQTNYTAAKAGVIGFSKSLAREIASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTKAL-TDEQRASISAGIPANRLGDAKEIASAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  DE+R +I  GIP  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGMYM  243
            +VNGGM +
Sbjct  284  DVNGGMLI  291

379) BT_3771 in NC_004663


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (526),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 110/249 (45%), Positives = 172/249 (70%), Gaps = 9/249 (3%)

Query  3    LLDGKTAIVTGAA--RGIGKAIALKFAAEGANIAFTDLVIDENAEKTRVELEAMGVKAKG  60
            LL+GK AI+TGAA  RGIG+A A+ FA +GA + + DL  DE+A  +R    ++G    G
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESA--ARDAAATLGEGHLG  100

Query  61   YASNAANFEDTAKVVEEIHKDFGRIDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSAF  120
             A+N A+  +  + V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L++++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NFIHACTPVMMRQKAGSIINMASVVGVHGNA--GQANYAASKAGMIALAKSIAQELGSRG  178
               +A  P M  Q +GSI+ M+SV + +G +  G ++Y+A+KAG+++L+K++A+E+G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRANAIAPGFILTDMTAAL-SDEVRAEWAKKIPLRRGGTPEDVANIATFLASDMSSYVSG  237
            IR N+IAPG+I TD+T++L  DE R      IPL R G+++DVAN A FLASD+SSY++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIQVDGGM  246
              ++V+GGM
Sbjct  281  ITLDVNGGM  289

380) Murru_3109 in NC_015945


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (526),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 110/255 (44%), Positives = 178/255 (70%), Gaps = 14/255 (5%)

Query  1    MQLLEGKNVIITGAS--RGIGKGIAEVFAKHGANVAFTYSSSEAPALELEKELT--QMGV  56
            + LL+GK  IITGA+  RGIG++ A  FA+HGA V +     E++A +    L   ++G+
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATLGEGHLGL  101

Query  57   KAKAYKSNAASFEESEALVAKVLEDFDGRIDVLINNAGITKDNLLMRMGEDDFDKVIEIN  116
             A+   ++ +   ++   VA ++E+F GRIDVL+NNAGIT+    + +  +D+DKV++++
Sbjct  102  AANV--ADESQVKQA---VATIIEHF-GRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVS  155

Query  117  LKSVFNMTKAVQRTMLKQRKGSIINMSSVVGVKGNA--GQTNYAASKAGMIGFTKSVALE  174
            L++ + M++AV  TM  Q  GSI+ MSSV + +G +  G  +Y+A+KAG++G+ K++A E
Sbjct  156  LRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE  215

Query  175  LGSRNIRCNAIAPGFIETEMTEKL-DEKVVQGWREGIPLKRGGNPEDVANACVFLASDLS  233
            +G+ +IR N+IAPG+I+T++T  L ++   ++  EGIPL R G ++DVANA +FLASDLS
Sbjct  216  FGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLS  275

Query  234  GYITGQVLNVDGGML  248
            +Y+TG  L+V+GGML
Sbjct  276  SYLTGITLDVNGGML  290

381) Achl_0410 in NC_011886


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (526),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 108/254 (43%), Positives = 164/254 (65%), Gaps = 12/254 (4%)

Query  6    RTAVLTGATSDRGIGITTARRYAREGWAVVILDLDGEKSAKVAAEIGN-EFNVPAFGHEI  64
            + A++TGA+S+RGIG +TA  +A++G  VVILDLD   +   AA +G+ ++ ++A     
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-----  103

Query  65   DvaneasvtaaqaavasevaaGNLPPVGALANIAGITSPVPFLETTLELWHKVMDVNATG  124
                      +Q   A      ++  ++ L N AGIT P+  L+      +KV+DV+  G
Sbjct  104  -----NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  125  TYLVSKAFLPDMIENGWGRIVNMSSVSAQRGGGVFGKVPYSAAKAAILGFTKALARELGT  184
            T L+S+A +P M  +G G IV MSSVSAQRGGG+FG   YSAAKA++LG+ KA+ARE+G 
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  185  TGVTVNAITPGAVDTNIRVG-STDEQEAAINAGIPLGRNATTEEVASVITFLSSEDSAYL  243
              + +N+I+PG ++T+I  G   DE+  AI  GIPLGR +++++VA+   FL+S+ S+YL
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  244  TGTVVDINGGSHMH  257
            TG  +D+NGG  +H
Sbjct  279  TGITLDVNGGMLIH  292

382) Dd1591_1623 in NC_012912


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (525),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 106/246 (44%), Positives = 170/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKIVLVTGAS--RGIGRAIAETLAARGATVIGTATSEKGAADISAWLGPKGKGYAL  58
            M ++GKI ++TGA+  RGIGRA A T+A +GA V+     E +A D +A LG    G A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSASIESVLASIKEAFGDIDILVNNAGITRDDLMLRMKDEAWQEVLDTNLSSVFRLS  118
            NV+D + +   +A+I E FG ID+LVNNAGIT+    L ++    + VLD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRAMMKKRFGRIITVGSVIGSRGNS--GQANYAAAKAGLVGFSKSLAQEVASRGITV  176
            +AV+ +M  +  G I+ ++SV + RG +  G ++Y+AAKAG++G++K++A+E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TEEQRAGILTNVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+  +P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

383) fabG in NC_008095


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (525),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 106/249 (43%), Positives = 175/249 (71%), Gaps = 10/249 (4%)

Query  4    FKDKVVLVTGGS--RGIGRACAVAFAKAGASTVVISYAGNEAAAQETVALLQAEGAKAEA  61
            +++K+ ++TG++  RGIGRA AV+FA+ GA  V++    +E+AA+++ A L   G    +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAATL---GEGHLG  100

Query  62   IRFdvsdsaacasavdGIVKGHGRLDVLVNNAGVAVDGLVMRVKDEDWDKQLDTNLKGAF  121
            +  +V+D +    AV  I+   GR+DVLVNNAG++     + ++  D DK LD +L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  SLIRAVSRPMMKQKGGAIINITSVVGEMGNG--GQAAYSASKAGLIGLTKSVARELSSRN  179
             + +AV   M  Q +G+I+ ++SV ++ G G  G + YSA+KAG++GL K++ARE+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNAVSPGFIGTDMTHQI-NDEMRQKMLEGIPLGRLGNPEEVAGAVLFLAGDAASYITG  238
            IR+N+++PG+I TD+T  + +DE R+ ++EGIPLGRLG +++VA A LFLA+D +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  EVLKVNGGM  247
              L VNGGM
Sbjct  281  ITLDVNGGM  289

384) PM3016_5201 in NC_016935


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (525),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 172/249 (70%), Gaps = 9/249 (3%)

Query  1    MLTGKVALVTGAS--RGIGRAIAVALAEAGADVVVNYAGSEGAASETVQAVEALGRKAVK  58
            +L GK+A++TGA+  RGIGRA AV++A+ GA VV+     +   S + +A  +LG   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  59   IKANVGQSQEVDDMFKQVLETFGRIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVF  118
            + ANV++  +V +    ++E FGRID+LVNNAGIT+    + ++  ++D+V++ +L+G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCIKAATRPMMKQRSGRIINISSVVGALGNA--GQMNYVAAKAGVIGMTKTAAKELASRG  176
               +A    M  Q SG I+ +SSV +  G +  G  +Y AAKAGV+G+ K+ A+E+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNCVAPGFIETDMTDKL-NEELRQALLTQIPLARLGQPEDIAKAVRYLASEDASYLTG  235
            I +N +APG+I+TD+T+ L ++E R+A++  IPL+RLG ++D+A+A  +LAS+ +SYLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  QTIHVDGGM  244
             T++V+GGM
Sbjct  281  ITLDVNGGM  289

385) B2K_26895 in NC_017672


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (525),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 103/251 (42%), Positives = 173/251 (69%), Gaps = 9/251 (3%)

Query  8    MLTGKVALVTGAS--RGIGRAIAVALAEAGADVVVNYAGSEGAASETVQAVEALGRKAVK  65
            +L GK+A++TGA+  RGIGRA AV++A+ GA VV+     +   S + +A  +LG   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  66   IKANVGQSQEVDDMFKQVLETFGRIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVF  125
            + ANV++  +V +    ++E FGRID+LVNNAGIT+    + ++  ++D+V++ +L+G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  126  NCIKAATRPMMKQRSGRIINISSVVGALGNA--GQMNYVAAKAGVIGMTKTAAKELASRG  183
               +A    M  Q SG I+ +SSV +  G +  G  +Y AAKAGV+G+ K+ A+E+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  184  ITVNCVAPGFIETDMTDKL-NEELRQALLTQIPLARLGQPEDIAKAVRYLASEDASYLTG  242
            I +N +APG+I+TD+T+ L ++E R+A++  IPL+RLG ++D+A+A  +LAS+ +SYLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  243  QTIHVDGGMYM  253
             T++V+GGM +
Sbjct  281  ITLDVNGGMLI  291

386) fabG in NC_015690


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (525),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 172/249 (70%), Gaps = 9/249 (3%)

Query  1    MLTGKVALVTGAS--RGIGRAIAVALAEAGADVVVNYAGSEGAASETVQAVEALGRKAVK  58
            +L GK+A++TGA+  RGIGRA AV++A+ GA VV+     +   S + +A  +LG   + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLG  100

Query  59   IKANVGQSQEVDDMFKQVLETFGRIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVF  118
            + ANV++  +V +    ++E FGRID+LVNNAGIT+    + ++  ++D+V++ +L+G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCIKAATRPMMKQRSGRIINISSVVGALGNA--GQMNYVAAKAGVIGMTKTAAKELASRG  176
               +A    M  Q SG I+ +SSV +  G +  G  +Y AAKAGV+G+ K+ A+E+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNCVAPGFIETDMTDKL-NEELRQALLTQIPLARLGQPEDIAKAVRYLASEDASYLTG  235
            I +N +APG+I+TD+T+ L ++E R+A++  IPL+RLG ++D+A+A  +LAS+ +SYLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  QTIHVDGGM  244
             T++V+GGM
Sbjct  281  ITLDVNGGM  289

387) fabG in NC_008268


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (525),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 167/249 (68%), Gaps = 8/249 (3%)

Query  1    MTLLEGRVAVVTGAA--QGIGFEMARKFASEGASVVLGDMHAENVKAAAGKLEADGFQAV  58
            + LL+G++A++TGAA  +GIG   A  FA +GA VV+ D++    + AA+ L  +    +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HL  99

Query  59   AVACDVTDPDQMQNLGKTAIDAFGAMDVWVNNAGITRDATLRKMSLADFRSVIDVHLQGA  118
            ++A +V+D  Q+++   T I+ FG +DV VNNAGIT+      +  +D+  V+DV L+G+
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  WLGTQIASIAMREAGKGSIVNMSSISGK--VGMVGQTNYSAAKAGMVGLTKAAAKEVAHL  176
             L +Q    +MR  G GSIV MSS+S++   G+ G  +YSAAKAG++GL KA A+E +  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GVRVNAIQPGVVNTDMIRAL-RADIIEAKLKEVPMGRGAEPEEIANVALFLASDLSSYMT  235
             +R+N+I PG+++TD+  +L + +  +A +  +P+GR + ++++AN ALFLASDLSSY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GTVLEVTGG  244
            G  L+V GG
Sbjct  280  GITLDVNGG  288

388) HMPREF0946_00047 in NC_022196


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (525),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 170/247 (69%), Gaps = 12/247 (4%)

Query  4    LEGKIAVVTGSA--RGIGRAIVEKLAAHGAKMVISCDMGETSYEQKNVV----HKIL--N  55
            L+GKIA++TG+A  RGIGRA    +A HGA++VI  D++E++  +        H  L  N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVIL-DLDESAARDAAATLGEGHLGLAAN  104

Query  56   VTDREAIKTFVDEVEKEYGKIDILVNNAGITKDGLLMRMTEDQWDAVINVNLKGVFNMTQ  115
            V+D   +K  V  +  ++G+ID+LVNNAGIT+    + +  ++ D V++V+L+G + M+Q
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  116  AVSRSMLKARKGSIITLSSVVGLHGNA--GQTNYAATKGGVVAMSKTWAKEFGGRNVRAN  173
            AV  +M     GSI+ +SSV + +G +  G  +Y+A+K+GV++++K+ A+EFG  ++R N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  174  CVAPGFIQTPMTDVLSEDTIK-GMLDATPLGRLGQVEDIANAVLFLASDESSFITGEVIS  232
             +APG+I+T +T+ L +D  + +++++ PLGRLG  +D+ANA LFLASD SS++TG  + 
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  233  VSGGLML  239
            V+GG+++
Sbjct  285  VNGGMLI  291

389) FN0494 in NC_003454


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  143 bits (525),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 171/247 (70%), Gaps = 12/247 (4%)

Query  8    LEGKVAVVTGSA--RGIGRAIVEKLAAHGAKMVISCDMGETSYEQGNVV----HKIL--N  59
            L+GK+A++TG+A  RGIGRA    +A HGA++VI  D++E++  ++       H  L  N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVIL-DLDESAARDAAATLGEGHLGLAAN  104

Query  60   VTDREAIKAFVDEVEKEYGKIDILVNNAGITKDGLLMRMTEDQWDAVINVNLKGVFNMTQ  119
            V+D   +K  V  +  ++G+ID+LVNNAGIT+    + +  ++ D V++V+L+G + M+Q
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  120  AVSRSMLKARKGSIITLSSVVGLHGNA--GQTNYAATKGGVVAMSKTWAKEFGGRNVRAN  177
            AV  +M     GSI+ +SSV + +G +  G  +Y+A+K+GV++++K+ A+EFG  ++R N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  178  CVAPGFIQTPMTDVLSEDTIK-GMLDATPLGRLGQVEDIANTVLFLASDESSFITGEVIS  236
             +APG+I+T +T+ L +D  + +++++ PLGRLG  +D+AN+ LFLASD SS++TG  + 
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  237  VSGGLML  243
            V+GG+++
Sbjct  285  VNGGMLI  291

390) M493_17135 in NC_022080


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 117/253 (47%), Positives = 185/253 (74%), Gaps = 5/253 (1%)

Query  1    MNFQDRVAFITGAGSKRGIGRETAKQLAYRGATVILADIDFEGVKEAAEEI-NAQNGKAS  59
            M +Q+++A+ITGA+S RGIGR TA  +A +GA V++ D+D  + ++AA  + +++ G A+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  60   PVQLDVTNRAQVSSVVQEIVGKFGKIDILVNNAGITRPTRVLEIPEEEWDLIFRVNVKSI  119
                +V++ +QV   V  I+  FG+ID+LVNNAGIT+P + L+I   + D ++ V++++ 
Sbjct  104  ----NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  YYLTQEVLPHMKRQHYGRIVNLgsvsgkrgggvfggsHYSaakaavagftkavaREMAPF  179
              ++Q V+P M+ Q  G IV ++SVS++RGGG+FGG+HYSAAKA+V G+ KA+ARE +P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  180  GITCNAVAPGLIGTDITGGMLTEEVKKEIIKGVPVGRIGTVTDVAYTIAFLASEQAGYIT  239
             I  N++APGLI TDITGG++ +E +  II G+P+GR+G+  DVA +  FLAS+ ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  240  GEEIDINGGMHID  252
            G  +D+NGGM I+
Sbjct  280  GITLDVNGGMLIH  292

391) Shal_1777 in NC_010334


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (522),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 164/244 (68%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAVAETLVSAGAVVIGTATSERGAEAIQAYLGDKGHGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+   GA V+     E +A    A LG+   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDADSVKALFETIKATAGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFRTSKA  124
            +D   VK    TI    G +D+LVNNAGIT+    + ++ ++ + ++D +L + +  S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRPMMKKRHGRIINIGSVVGTMGNA--GQTNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+  M  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEDQ-QQAIMSQVPMERLGQAQEIAHAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +D+ ++AI+  +P+ RLG AQ++A+A LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

392) Emtol_4219 in NC_018748


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 107/254 (43%), Positives = 173/254 (69%), Gaps = 11/254 (4%)

Query  1    MTLLQNKVALVTGAS--RGIGREIAKKFAEQGANVAFTYLSSVEKGQALEAELAAYGVKA  58
            + LLQ K+A++TGA+  RGIGR  A  FA++GA V +  L   + + A +A  A+ G   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL---DESAARDAA-ATLGEGH  98

Query  59   KGFRSDASDFAAAEQLVTDVVAEFGTLDILVNNAGITRDTLLMRMSEEQWDEVLRVNLKS  118
             G+ ++ +D +   Q V+ ++ +FG +D+LVNNAGIT+    + +   + D VL V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFNLTKAATKPMMRAK-SGSIINITSVVGLMGNA--GQANYSASKAGILGFTKSVAKELG  175
             + L   A  P MRA+ SGSI+ ++SV +  G +  G ++YSA+KAG+LG+ K++A+E+G
Sbjct  159  TL-LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  SRNIRSNALAPGFIETEMTGEL-NEKALEEWLKNIPLRRAGQGEDVANACVFLASDMSKY  234
            + +IR N++APG+I+T++TG L ++   +  +  IPL R G ++DVANA +FLASD+S Y
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  ITGQTLQVDGGMLM  248
            +TG TL+V+GGML+
Sbjct  278  LTGITLDVNGGMLI  291

393) Prede_2095 in NC_019968


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 174/252 (70%), Gaps = 13/252 (5%)

Query  3    LLSGKTALVTGAA--RGIGKAIALKYASEGANVAFTDLVIDEEHGGLQTEREIAA-LGVK  59
            LL GK A++TGAA  RGIG+A A+ +A +GA V + DL  DE      + R+ AA LG  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DES-----AARDAAATLGEG  97

Query  60   AKGYASNAADFAQTEEVVKRVKEEFGSVDILVNNAGITKDGLMLRMTEAQWDAVIAVNLK  119
              G A+N AD +Q  + V  + E+FG +D+LVNNAGIT+    L +  ++ D V+ V+L+
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  120  SAFNFIHACVPVMMRQRGGSIINMASVVGVHGNA--GQANYAASKAGLIALAKSVGQEMG  177
            +++   +A +P M  Q +GSI+ M+SV + +G +  G ++Y+A+KAG+++L+K++++E G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  178  PKGIRANAIAPGFIDTAMTQALPENIRKEWISK-IPLRRGGTVDDIASCAVFLASDMSSY  236
            P  IR N+IAPG+I+T +T +L ++ R++ I   IPL R G+ +D+A+ A+FLASD+SSY
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  237  ISGQVIQIDGGM  248
            ++G  ++++GGM
Sbjct  278  LTGITLDVNGGM  289

394) Alvin_1891 in NC_013851


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 103/248 (42%), Positives = 171/248 (69%), Gaps = 8/248 (3%)

Query  1    MLKGEIALVTGAS--RGIGRAIAMALAEQGATVVGTATTESGAQAIEQALTGAGHQGLGL  58
            +L+G IA++TGA+  RGIGRA A+++A++GA VV     ES+A+    +L G GH  LGL
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGH--LGL  101

Query  59   VLNVSDPASVEATLAQITERLGAPSILVNNAGITRDNLLMRMKDEEWDAVIDTNLTSLYR  118
              NV+D + V  ++A I E++G   +LVNNAGIT+    + ++  + D V+D +L +   
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  LSKGCLRAMTKARKGRIINIASVVGSMGNA--GQTNYAAAKAGMMGFTKSLAREVGSRGI  176
            +S++ + +M     G I+ ++SV +  G +  G  +Y+AAKAG++G+ K++ARE G+  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  177  TVNCVAPGFIDTDMTKEL-PEAHRQTLLGAIPLGRLGQPEEIASAVVFLASPGGAYITGE  235
             +N +APG+I+TD+T  L  + +R++++ +IPLGRLG ++++A+A +FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  236  TLHVNGGM  243
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

395) fabG in NC_012522


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (522),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 167/249 (68%), Gaps = 8/249 (3%)

Query  1    MTLLEGRVAVVTGAA--QGIGLEMARKFASEGASVVLGDMHAENVKTAAAKLEADGFQAV  58
            + LL+G++A++TGAA  +GIG   A  FA +GA VV+ D++    + AAA L  +    +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HL  99

Query  59   GVACDVTDADQMQNLGKTALDSFGAMDVWVNNAGITRDATLRKMSLADFRSVIDVHLQGA  118
            G+A +V+D  Q+++   T ++ FG +DV VNNAGIT+      +  +D+  V+DV L+G+
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  WLGTQIASIAMREAGKGSIVNISSISGK--VGMVGQTNYSAAKAGMVGLTKAAAKEVAHL  176
             L +Q    +MR  G GSIV +SS+S++   G+ G  +YSAAKAG++GL KA A+E +  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GVRVNAIQPGVVNTDMIRAL-RADIIEAKLKEVPMGRGAEPEEIANVALFLASDMSSYMT  235
             +R+N+I PG+++TD+  +L + +  +A +  +P+GR + ++++AN ALFLASD+SSY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GTVLEVTGG  244
            G  L+V GG
Sbjct  280  GITLDVNGG  288

396) RA0C_1432 in NC_017045


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 175/252 (70%), Gaps = 10/252 (3%)

Query  1    MRLLEGKVALITGAT--RGIGKGIAEIFAAQGAQVAFTYAGSVDKAQALEAELNKTTKAK  58
            + LL+GK+A+ITGA+  RGIG++ A  FA +GA+V +     +D + A +A         
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHL  99

Query  59   AYQSDASDYEGSQKLVEEVLAEFGKIDILVNNAGITKDNLMLRMSKEDWDTIIKVNLDSV  118
            +  ++ +D    ++ V  ++ +FG+ID+LVNNAGIT+    L +   D D ++ V+L + 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FNLTKAVIKPMMKARG-GSIINMTSVVGIKGNA--GQANYAASKAGVIGFTKSIALELGS  175
            + +++AVI P M+A+G GSI+ M+SV + +G +  G ++Y+A+KAGV+G+ K++A E+G+
Sbjct  160  LLMSQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RNIRCNAIAPGFIETEMTAAL-DEKTVQGWRETIPLKRGGQPEDVANACVFLGSELSSYV  234
             +IR N+IAPG+I+T++T++L ++   ++  E IPL R G ++DVANA +FL+S+LSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQVLNVDGGML  246
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

397) Riean_1164 in NC_014738


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 175/252 (70%), Gaps = 10/252 (3%)

Query  1    MRLLEGKVALITGAT--RGIGKGIAEIFAAQGAQVAFTYAGSVDKAQALEAELNKTTKAK  58
            + LL+GK+A+ITGA+  RGIG++ A  FA +GA+V +     +D + A +A         
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHL  99

Query  59   AYQSDASDYEGSQKLVEEVLAEFGKIDILVNNAGITKDNLMLRMSKEDWDTIIKVNLDSV  118
            +  ++ +D    ++ V  ++ +FG+ID+LVNNAGIT+    L +   D D ++ V+L + 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FNLTKAVIKPMMKARG-GSIINMTSVVGIKGNA--GQANYAASKAGVIGFTKSIALELGS  175
            + +++AVI P M+A+G GSI+ M+SV + +G +  G ++Y+A+KAGV+G+ K++A E+G+
Sbjct  160  LLMSQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RNIRCNAIAPGFIETEMTAAL-DEKTVQGWRETIPLKRGGQPEDVANACVFLGSELSSYV  234
             +IR N+IAPG+I+T++T++L ++   ++  E IPL R G ++DVANA +FL+S+LSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQVLNVDGGML  246
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

398) B739_0717 in NC_018609


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 176/252 (70%), Gaps = 10/252 (3%)

Query  1    MRLLEGKVALITGAT--RGIGKGIAEIFAAQGAQVAFTYAGSVDKAQALEAELSKTTKAK  58
            + LL+GK+A+ITGA+  RGIG++ A  FA +GA+V +     +D + A +A  +      
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHL  99

Query  59   AYQSDASDYEGSQKLVEEVLAEFGKIDILVNNAGITKDNLMLRMSKEDWDTIIKVNLDSV  118
            +  ++ +D    ++ V  ++ +FG+ID+LVNNAGIT+    L +   D D ++ V+L + 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FNLTKAVIKPMMKARG-GSIINMTSVVGIKGNA--GQANYAASKAGVIGFTKSIALELGS  175
            + +++AVI P M+A+G GSI+ M+SV + +G +  G ++Y+A+KAGV+G+ K++A E+G+
Sbjct  160  LLMSQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RNIRCNAIAPGFIETEMTAAL-DEKTVQGWRETIPLKRGGQPEDVANACVFLGSELSSYV  234
             +IR N+IAPG+I+T++T++L ++   ++  E IPL R G ++DVANA +FL+S+LSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQVLNVDGGML  246
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

399) G148_0442 in NC_020125


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 175/252 (70%), Gaps = 10/252 (3%)

Query  1    MRLLEGKVALITGAT--RGIGKGIAEIFAAQGAQVAFTYAGSVDKAQALEAELNKTTKAK  58
            + LL+GK+A+ITGA+  RGIG++ A  FA +GA+V +     +D + A +A         
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHL  99

Query  59   AYQSDASDYEGSQKLVEEVLAEFGKIDILVNNAGITKDNLMLRMSKEDWDTIIKVNLDSV  118
            +  ++ +D    ++ V  ++ +FG+ID+LVNNAGIT+    L +   D D ++ V+L + 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FNLTKAVIKPMMKARG-GSIVNMTSVVGIKGNA--GQANYAASKAGVIGFTKSIALELGS  175
            + +++AVI P M+A+G GSIV M+SV + +G +  G ++Y+A+KAGV+G+ K++A E+G+
Sbjct  160  LLMSQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RNIRCNAIAPGFIETEMTAAL-DEKTVQGWRETIPLKRGGQPEDVANACVFLGSELSSYV  234
             +IR N+IAPG+I+T++T++L ++   ++  E IPL R G ++DVANA +FL+S+LSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQVLNVDGGML  246
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

400) sdr in NC_017569


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 175/252 (70%), Gaps = 10/252 (3%)

Query  1    MRLLEGKVALITGAT--RGIGKGIAEIFAAQGAQVAFTYAGSVDKAQALEAELNKTTKAK  58
            + LL+GK+A+ITGA+  RGIG++ A  FA +GA+V +     +D + A +A         
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHL  99

Query  59   AYQSDASDYEGSQKLVEEVLAEFGKIDILVNNAGITKDNLMLRMSKEDWDTIIKVNLDSV  118
            +  ++ +D    ++ V  ++ +FG+ID+LVNNAGIT+    L +   D D ++ V+L + 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FNLTKAVIKPMMKARG-GSIINMTSVVGIKGNA--GQANYAASKAGVIGFTKSIALELGS  175
            + +++AVI P M+A+G GSI+ M+SV + +G +  G ++Y+A+KAGV+G+ K++A E+G+
Sbjct  160  LLMSQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RNIRCNAIAPGFIETEMTAAL-DEKTVQGWRETIPLKRGGQPEDVANACVFLGSELSSYV  234
             +IR N+IAPG+I+T++T++L ++   ++  E IPL R G ++DVANA +FL+S+LSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQVLNVDGGML  246
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

401) Weevi_0015 in NC_015144


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 105/255 (42%), Positives = 175/255 (69%), Gaps = 18/255 (7%)

Query  1    MKLLEGKVAIVTGAT--RGIGKSIAQTFIEHGA-TVIFTYASSVEKASALEKELRELGTI  57
            + LL+GK+AI+TGA+  RGIG++ A TF +HGA  VI+    S  + +A       LG  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA-----ATLGEG  97

Query  58   K-GYQSdaadydaaQELVSEVINEFGRIDIVVNNAGITRDNLLMRMSLEDFDKVVQVNLN  116
              G  ++ AD    ++ V+ +I++FGRID++VNNAGIT+    + +   D+DKV++V+L 
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  117  SAFNLTKAAIRPMMKQRNGVILNMSSIVGLKGNA--GQANYAASKAGLIGFSKSVALELG  174
            +++ +++A I  M  Q +G I+ MSS+ + +G +  G ++Y+A+KAG++G++K++A E+G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  175  SRNIRCNVIAPGFIETEMTEVLDEKTVEEWRN----GIPLKRGGKPEDIANACLFLASDL  230
            + +IR N IAPG+I+T++T  L +   +E+R+    GIPL R G ++D+ANA LFLASDL
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQ---DERRHAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  231  ANYITGQVISVDGGL  245
            ++Y+TG  + V+GG+
Sbjct  275  SSYLTGITLDVNGGM  289

402) fabG in NC_008800


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLAERGARVIGTATSEKGAEAISAYLGDQGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  +A++GARV+     E +A   +A LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPASIESVLATIRAEFGEVDILVNNAGITRDNLLMRMKDEEWQDIIDTDLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++  + + ++D  L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTTAL-TDDQRAGILAQVPANRLGQAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

403) YE105_C2484 in NC_015224


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAELLAERGARVIGTATSEKGAEAISAYLGDQGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  +A++GARV+     E +A   +A LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPASIESVLATIRAEFGEVDILVNNAGITRDNLLMRMKDEEWQDIIDTDLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++  + + ++D  L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTTAL-TDDQRAGILAQVPANRLGQAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

404) Y11_05281 in NC_017564


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAELLAERGARVIGTATSEKGAEAISAYLGDQGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  +A++GARV+     E +A   +A LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPASIESVLATIRAEFGEVDILVNNAGITRDNLLMRMKDEEWQDIIDTDLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++  + + ++D  L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTTAL-TDDQRAGILAQVPANRLGQAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

405) fabG in NC_014019


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 102/254 (41%), Positives = 170/254 (67%), Gaps = 14/254 (5%)

Query  1    MRLKDKVAIITGAAN--GLGFEASRIFAQEGAKVAMVDYDAKTGEERAAQLKEEGGDVAF  58
            M L++K+AIITGAA+  G+G  ++  FAQ+GA+V ++D D  ++ + AA L E  G++++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGL  101

Query  59   FQVNVADRDSVDAMVEEVVKRYSKIDILINNAGITRDGMLTKLSVENFQAVINVNLTGVF  118
               NVAD   V   V  ++ ++++ID+L+NNAGIT+      +   +++ V++V+L G +
Sbjct  102  -AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  HCTQAVVPHMIAQGKGKIISTSSVS-----GVYGNVGQTNYAATKAGVVGMTKTWAKELG  173
              +QAV+P M AQG G I+  SSVS     G++G     +Y+A+KAGV+G+ K+ A+E+G
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMAREFG  217

Query  174  RKGINVNAVAPGFIETDMVKA-MPDKIIDQMKSTIPLQRLGQPSDIGYAYLYLASDESNY  232
               I +N++APG+I+TD+  + M D   + +   IPL RLG + D++ A L+LASD S+Y
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  233  INGTTLHVDGGIMM  246
            + G TL+V+GG+++
Sbjct  278  LTGITLDVNGGMLI  291

406) fabG in NC_017138


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 103/254 (41%), Positives = 169/254 (67%), Gaps = 14/254 (5%)

Query  1    MRLKDKVAIITGAAN--GLGFEASRIFAQEGAKVAMVDYDAKVGEERAAQLKEEGGDVAF  58
            M L++K+AIITGAA+  G+G  ++  FAQ+GA+V ++D D   + + AA L E  G++++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGL  101

Query  59   FQVNVADRDSVDAMVEEVVKRFSKIDILINNAGITRDGMLTKLSVENFQAVINVNLTGVF  118
               NVAD   V   V  ++ +F++ID+L+NNAGIT+      +   +++ V++V+L G +
Sbjct  102  -AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  HCTQAVVPHMIAQGKGKIISTSSVS-----GVYGNVGQTNYAATKAGVVGMTKTWAKELG  173
              +QAV+P M AQG G I+  SSVS     G++G     +Y+A+KAGV+G+ K+ A+E+G
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMAREFG  217

Query  174  RKGINVNAVAPGFIETDMVKA-MPDKIIDQMKSTIPLQRLGQPSDIGYAYLYLASDESNY  232
               I +N++APG+I+TD+  + M D   + +   IPL RLG + D++ A L+LASD S+Y
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  233  INGTTLHVDGGIMM  246
            + G TL+V+GG+++
Sbjct  278  LTGITLDVNGGMLI  291

407) fabG in NC_007429


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGIPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

408) fabG-1 in NC_014012


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 99/244 (41%), Positives = 166/244 (69%), Gaps = 5/244 (2%)

Query  7    LSGKVALVTGAS--RGIGRAVAETLVSAGAIVIGTATSERGAAAIQEYLGDKGFGFVLNV  64
            L GK+A++TGA+  RGIGRA A T+   GA V+     E +A      LG+  +G+  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDKDSVAELFSTIKEKVGDVNILVNNAGITRDNLLMRMKEDEWGDIIDTNLTSIFRTSKA  124
            +D   V +  +TI E  G +++LVNNAGIT+    + ++ ++ + ++D +L + +  S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRSMMKNRHGRIINIGSVVGSSGNP--GQTNYCAAKAGLLGFTKSLAKEVASRQITVNA  182
            V+ +M  +  G I+ ++SV +  G    G  +Y AAKAG+LG+ K++A+E ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  VSPGFIQTDMTDEL-TEEQQQGIMSQVPMARLGQAQEIANAVLFLASDSAAYITGETLHV  241
            ++PG+I+TD+T+ L  +E++++I+  +P++RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

409) BXY_48340 in NC_021017


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (524),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 110/249 (45%), Positives = 171/249 (69%), Gaps = 9/249 (3%)

Query  3    LLDGKTAIVTGAA--RGIGKAIALKFAAEGANIAFTDLVIDENAENTAKELEAMGVKAKG  60
            LL+GK AI+TGAA  RGIG+A A+ FA +GA + + DL  DE+A   A    ++G    G
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAA--TLGEGHLG  100

Query  61   YASNAANFEDTAKVVEEIHKDFGRIDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSAF  120
             A+N A+  +  + V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L++++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NFIHACTPIMMRQKAGSIINMASVVGVHGNA--GQANYAASKAGMIALAKSIAQELGSRG  178
               +A  P M  Q +GSI+ M+SV + +G +  G ++Y+A+KAG+++L+K++A+E+G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRANAIAPGFILTDMTAAL-SDEVRAEWAKKIPLRRGGTPEDVANIATFLASDMSSYVSG  237
            IR N+IAPG+I TD+T++L  DE R      IPL R G+++DVAN A FLASD+SSY++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIQVDGGM  246
              ++V+GGM
Sbjct  281  ITLDVNGGM  289

410) Bache_1116 in NC_014933


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  142 bits (524),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 107/249 (43%), Positives = 169/249 (68%), Gaps = 9/249 (3%)

Query  3    LLDGKTAIVTGAA--RGIGKAIALKFAQEGANVAFTDLVIDENAEATTKEIETLGVKAKA  60
            LL+GK AI+TGAA  RGIG+A A+ FAQ+GA V + DL    +  A+     TLG    +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL----DESAARDAAATLGEGHLG  100

Query  61   YASNAANFEDTAKVVEEIHKDFGRIDILVNNAGITRDGLMMRMSEQQWDMVININLKSAF  120
             A+N A+  +  + V  I  +FGRID+LVNNAGIT+    + +   + D V++++L++++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NFIHACTPIMMRQKSGSIINMASVVGVHGNA--GQANYSASKAGMIALAKSIAQELGSRG  178
               +A  P M  Q SGSI+ M+SV + +G +  G ++YSA+KAG+++L+K++A+E+G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRANAIAPGFIMTAMTDAL-SEEVKAEWCKKIPLRRGGTPEDVANVATFLASDMSSYVSG  237
            IR N+IAPG+I T +T++L  +E +      IPL R G+++DVAN A FLASD+SSY++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIQIDGGM  246
              ++++GGM
Sbjct  281  ITLDVNGGM  289

411) NH44784_002121 in NC_021285


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 116/252 (47%), Positives = 179/252 (72%), Gaps = 3/252 (1%)

Query  5    SLGLLAGKRAVVTGGANPRGIGAAIVAQFLAQGASVAVLDRDYPAGADAA--LVGGRVNL  62
            +L LL GK A++TG+A+ RGIG A    F  +GA V +LD D +A+ DAA  L  G++ L
Sbjct  42   PLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL  101

Query  63   HCDVSSGASCEQAVARAAQALGGIDLLVNNAGIVAATRIWDLPEDEFRRMLDVNLTGTYN  122
              +V+  +   QAVA   + +G ID+LVNNAGI  + +  D+  +++ ++LDV+L GT  
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  VTRAALPHLFESGRGPAIVNlgstaalrgggllggshyaasKGGVISFTKALARELGPRG  182
            +++A +P +   G G +IV ++S +A RGGG++GG+HY+A+K+GV+++ KA+ARE+GP  
Sbjct  162  MSQAVIPTMRAQGSG-SIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  183  VRANCVAPGIIETDMTLGKFGENWEQELKQGIPLQRFGSPAEVAQAILFLASDLSSYSTG  242
            +R N +APG+I+TD+T G   +++ + + +GIPL R+G++ +VA+A LFLASDLSSY TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  243  IVVDVNGGFHIH  254
            I +DVNGG  IH
Sbjct  281  ITLDVNGGMLIH  292

412) Sama_1980 in NC_008700


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/244 (42%), Positives = 168/244 (69%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGKAIALTLAEagatvvgtatSEKGAAAISDYLGDKGFGLVLNV  64
            L GK+A++TGA+  RGIG+A A+T+A+ GA VV     E +A   +  LG+  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TSSESVAEMYTAIKEKAGDVDILVNNAGITRDNLLMRMKDEEWEEIIDTNLTSLYRLSKP  124
            +    V +  ++I E  G +D+LVNNAGIT+    + ++  + + ++D +L +   +S++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRSMMKKRHGRIISIGSVVGTMGNA--GQVNYSAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ +M  +  G I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTPEQ-QQGIMSQVPMERLGQAQEIANAVLFLASDAAAYITGETLHV  241
            IAPG+I+TD+T+ L  ++ +++I+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

413) fabG1 in NC_015844


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 107/257 (42%), Positives = 174/257 (68%), Gaps = 19/257 (7%)

Query  1    MKLLEGKNAIITGAS--RGIGTGIARVFAENGANVAFTYSSSEAPALELE-----KELSG  53
            + LL+GK AIITGA+  RGIG + A  FA++GA V +         L+L+        + 
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI---------LDLDESAARDAAAT  93

Query  54   LGVKAKAYKSNAASFEAAEQLVAAVLKDFGGIDILINNAGITKDNLLMRMSEADFDSVIE  113
            LG    +  +N A      Q VA+++ +FG ID+L+NNAGIT+    + +  +D+D V++
Sbjct  94   LGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLD  153

Query  114  INLKSVFNMTKAVQRTMLKQRKGSIINMSSVVGVKGNA--GQANYAASKAGMIGFTKSVA  171
            ++L++ + M++AV  TM  Q  GSI+ MSSV + +G +  G ++Y+A+KAG++G+ K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  172  LELGSRNIRCNAIAPGFIETEMTAKL-DEKVVQGWREGIPLKRGGSPEDIANACLFFASD  230
             E+G+ +IR N+IAPG+I+T++T+ L ++   ++  EGIPL R G+++D+ANA LF+ASD
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD  273

Query  231  LSAYVTGQVLNVDGGML  247
            LS+Y+TG  L+V+GGML
Sbjct  274  LSSYLTGITLDVNGGML  290

414) fabG in NC_010287


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

415) fabG in NC_016798


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

416) CTO_0259 in NC_017437


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

417) A363_00254 in NC_020966


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

418) A5291_00253 in NC_020939


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

419) fabG in NC_012686


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

420) fabG in NC_012687


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

421) fabG in NC_017434


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

422) fabG in NC_017436


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

423) SOTOND1_00247 in NC_020967


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

424) SOTOND5_00246 in NC_020943


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

425) SOTOND6_00246 in NC_020968


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

426) fabG in NC_000117


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

427) fabG in NC_017431


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

428) fabG in NC_017439


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

429) BOUR_00249 in NC_020971


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

430) SOTONE8_00251 in NC_020942


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

431) fabG in NC_017952


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

432) fabG in NC_017951


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

433) fabG in NC_017953


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

434) fabG in NC_017440


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

435) fabG in NC_017430


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

436) fabG in NC_017432


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

437) fabG in NC_017429


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

438) SOTONG1_00246 in NC_020941


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

439) SOTONIA1_00248 in NC_020970


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAATKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+A+KAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

440) fabG in NC_020511


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

441) fabG in NC_020512


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

442) fabG in NC_021892


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

443) SOTONK1_00246 in NC_020965


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

444) L1115_00243 in NC_020929


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

445) L1224_00242 in NC_020973


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

446) L1440_00244 in NC_020937


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

447) L225667R_00243 in NC_020930


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

448) fabG in NC_021052


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

449) fabG in NC_021050


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

450) L2B795_00243 in NC_020938


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

451) L2B8200_00242 in NC_020945


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

452) L2BAMS1_00242 in NC_020933


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

453) L2BAMS2_00242 in NC_020934


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

454) L2BAMS3_00242 in NC_020977


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

455) L2BAMS4_00243 in NC_020978


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

456) L2BAMS5_00243 in NC_020936


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

457) L2BCAN1_00244 in NC_020935


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

458) L2BCAN2_00243 in NC_020932


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

459) L2BCV204_00242 in NC_020976


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

460) fabG in NC_010280


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

461) L2BUCH2_00242 in NC_020931


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

462) fabG in NC_015744


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

463) L3404_00242 in NC_020974


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

464) fabG in NC_021895


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

465) fabG in NC_021890


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

466) fabG in NC_021888


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

467) fabG in NC_021896


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

468) fabG in NC_021889


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

469) fabG in NC_021898


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

470) fabG in NC_021899


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

471) fabG in NC_021891


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

472) fabG in NC_021893


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

473) fabG in NC_021897


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

474) fabG in NC_021887


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

475) fabG in NC_017441


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

476) A7249_00253 in NC_020944


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

477) SOTONE4_00245 in NC_020969


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

478) SOTONF3_00246 in NC_020964


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

479) SOTONIA3_00248 in NC_020940


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAATKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+A+KAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

480) L2BLST_00242 in NC_020975


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

481) L11322_00243 in NC_020972


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

482) O170_01285 in NC_022106


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

483) O173_01290 in NC_022107


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

484) O175_01285 in NC_022108


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

485) O177_01285 in NC_022109


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

486) O179_01280 in NC_022110


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

487) O169_01300 in NC_022117


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

488) O172_01285 in NC_022118


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

489) O176_01285 in NC_022119


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

490) O178_01290 in NC_022120


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSTQVQNFLSEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAATKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+A+KAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

491) O180_01295 in NC_022121


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  4    LLVNKTAIVTGGS--RGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSF  61
            LL  K AI+TG++  RGIG + A  FA++GA V I +++  A++ AA TL+E    ++++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGL  101

Query  62   ALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIY  121
            A  +V+ +  V   V  ++ ++  IDV+VNNAGIT+    + +   +   V++ +L +  
Sbjct  102  A-ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  NVCSAVIRPMIKARSGAIINISSIVGLRGSP--GQTNYAAAKAGIIGFSKALSKEVGSKN  179
             +  AVI  M    SG+I+ +SS+ + RG+   G  +Y+AAKAG++G++KA+++E G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNCIAPGFIDTDMTKSL-NDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG  238
            IR+N IAPG+I+TD+T +L +D+ ++  + G+PLGR+G ++++A+AALFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVLSVDGGM  247
              L V+GGM
Sbjct  281  ITLDVNGGM  289

492) KTR9_1548 in NC_018581


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 108/252 (43%), Positives = 172/252 (69%), Gaps = 12/252 (4%)

Query  7    LLEGRTAVVTGAA--QGIGLEIARVLGVHGAKVVLADLRDDAVLEAAAGLRGQGIQSIGV  64
            LL+G+ A++TGAA  +GIG   A  ++ HGA+VV+ DL + A  +AAA L G+G   +G+
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEG--HLGL  101

Query  65   QCDVTDEDEVRNVVDHAVTEFGGLDVWVNNAGITRDASLKKMSL--ADFRLVTDVHLTGT  122
              +V+DE +V++ V   + +FG +DV VNNAGIT+  ++K + +  +D+  V DV L GT
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQ--PIKTLDIRPGDYDKVLDVSLRGT  159

Query  123  WLGVRAASARMRENGGGAIVNISSMSGKAGNP--GQTNYSAAKAGIVGMTKAAAKELAHH  180
             L  +A  + MR +G+G+IV +SS+S++ G    G  +YSAAKAG++G+ KA A+E++ +
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GVRVNAVQPGLIETAMTRA-MPAESFAAMEASIPMRRAGQPVDVANVVLFLSSGLAGYMT  239
             +R+N++ PGLI+T +T + M  E   A+  +IP+ R G + DVAN  LFL+S+L++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  240  GAVLEVAGGRLM  251
            G  L+V GG L+
Sbjct  280  GITLDVNGGMLI  291

493) Dhaf_3817 in NC_011830


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 105/250 (42%), Positives = 174/250 (70%), Gaps = 9/250 (3%)

Query  1    MLLNNSVAIVTGGS--RGIGRAIALELARAGAKVVVNYAGHGEKAEETLSLIQEAGGEAL  58
            MLL+  +AI+TG++  RGIGRA A+ +A+ GA+VV+   +++   + + +L    G   L
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHL  99

Query  59   AVQADVSQVEDVERLIQTTLKTYGKIDILVNNAGITRDTLLLRMKETDWDAVLDTNLKGV  118
            ++ A+V++  +V + + T +  +G+ID+LVNNAGIT+    L ++  D D VLD +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSKSMMKQRsgviinissvvgitgNA--GQANYSAAKAGIIGFTKSIAKELGSR  176
            +L ++AV  +M  Q SG I+ +SSV +  G +  G ++YSAAKAG++G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GIRVNAVAPGYISTDMTESL-GEEVREQVMTQIPLGRMGQPEDIARTVVFLASPAASYIT  235
             IR+N++APG I TD+T +L  +E R+ ++  IPLGR+G ++D+A + +FLAS  +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLAVDGGM  245
            G TL V+GGM
Sbjct  280  GITLDVNGGM  289

494) Mspyr1_37180 in NC_014814


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 103/246 (42%), Positives = 172/246 (70%), Gaps = 7/246 (2%)

Query  6    LLTGQTAVITGGA--QGLGFAIAQRFVDEGARVVLGDVNLEATQEAAEKLGGADVAHAVR  63
            LL G+ A+ITG+A  +G+G A A  F ++GARVV+ D++  A+++AA  LG ++++ A  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  64   CDVTSSaevdalvaaavdTFGALDIMVNNAGITRDATMRKMTEDDFDKVIAVHLKGTWNG  123
             +V+  ++V   VA+ ++ FG +D++VNNAGIT+      +  +D+DKV+ V L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  124  LRAAAAIMRENKRGVIVNMSSISGK--VGMIGQTNYSAAKAGIVGMTKAVSKELAYLGVR  181
             +A  + MR +  G IV MSS+S++   G++G  +YSAAKAG++G+ KA+++E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  182  VNAIQPGLIRSAMTEA-MPQRIWDSKVAEVPLGRAGEPDEVAKVALFLASDLSSYMTGTV  240
            +N+I PGLI++ +T + M +  +++ +  +PLGR G +++VA+ ALFLASDLSSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  241  LEVTGG  246
            L+V GG
Sbjct  283  LDVNGG  288

495) CCU_21980 in NC_021018


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 102/250 (41%), Positives = 169/250 (68%), Gaps = 11/250 (4%)

Query  1    MLKDKVAVVTGAG--RGIGREIAKTFAGYGAKVVV-NFNGSEERANSLVEEIKAEGGEAV  57
            +L++K+A++TGA+  RGIGR  A TFA  GA+VV+ +++ S  R     +   + G   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AFKANVADFAEAEALMKFAVTTYGRIDILVNNAGITRDNLVLGMKEADFDDVININLKGT  117
            ++ ANVAD ++    +   +  +GRID+LVNNAGIT+    L+++ +D+D V++++L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FNCIKHVYRTMMKQKYGRIINMSSVVGIEGNA--GQVNYAASKAGVIGITKSIAKELGSR  175
            +   + V  TM  Q  G I+ MSSV +  G +  G  +Y+A+KAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  GITANAIAPGFIKTDMTDAL-SDKAKEAMLDHITVKRLGEVSDIAETAAFLASDKASYIT  234
             I  N+IAPG+I TD+T++L  D  ++A+++ I + RLG   D+A++A FLASD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQVIKVDGGM  244
            G  + V+GGM
Sbjct  280  GITLDVNGGM  289

496) fabG in NC_009925


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (516),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 111/251 (45%), Positives = 170/251 (68%), Gaps = 13/251 (5%)

Query  4    LQDKVAIVTGAS--RGIGRATALALAGEGAKVAINYANSSGAADAVVAEITGQGGEALAL  61
            LQ+K+AI+TGA+  RGIGRATA+++A +GA+V I   + S+A DA  +     G   L+L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT----LGEGHLGL  101

Query  62   QANVAEADQVDTLFKTVLDKWGRADVLVNNAGITRDTLLLRMKPEDWQAVINLNLTGVYL  121
             ANVA+  QV     T+++  GR DVLVNNAGIT+    L ++P D + V++++L G  L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  CTRAVSKVMLKQRSGRIINIASVAGQMGNP--GQANYSAAKAGVIGFTKTVAKEMASRGV  179
             ++AV   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E ++  +
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNAVAPGFIATDMTEGLGSEE----IIKFIPLGRYGQPEEVAGMIRFLAADPASAYITG  235
             +N++APG+I TD+T GL  +E    II  IPLGR G +++VA    FLA+D  S+Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSYLTG  280

Query  236  QVFNVDGGMVM  246
              ++V+GGM++
Sbjct  281  ITLDVNGGMLI  291

497) AciX9_2850 in NC_015064


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (516),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 179/249 (72%), Gaps = 12/249 (4%)

Query  4    LSPRIALVTGAS--QGIGRacalalaaqgahvalaaRTLSKLEEVAA--EITALGGTAHA  59
            L  +IA++TGA+  +GIGRA A+++A +GA+V      +  L+E AA    ++LG    +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARV-----VILDLDESAARDAAATLGEGHLG  100

Query  60   FALDVSDETSIKSCAKAVQEHFGRVEILVNNAGITRDMLTLRMKRSDWDEVLGTNLTGAF  119
            +A +V+DE+ +K    ++ EHFGR+++LVNNAGIT+ + TL ++ +D D VL+ +L G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  120  LLTQACMQSMLKQRWGRVINITSVVGEVGAA--GQANYAASKAGLIGLTKSLARELASRT  177
            L++QA + +M  Q  G ++ ++SV ++ G++  G ++Y+A+KAG++GL K++ARE+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  178  ITVNAVAPGYIETAMT-AVLTDAQRAAMTQHIPLARAGTDADIAHAVAFLASEGASYITG  236
            I +N++APG I+T +T +++ D +R A+ + IPL+R G+  D+A+A  FLAS+ +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  237  HTLDVNGGM  245
             TLDVNGGM
Sbjct  281  ITLDVNGGM  289

498) fabG in NC_012491


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (516),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 171/249 (69%), Gaps = 9/249 (3%)

Query  1    MLTGKTALVTGAS--RGIGRAIALKLAEAGANVVVNYAGSEAAASETVALIKEMGRDAIM  58
            +L GK A++TGA+  RGIGRA A+ +A+ GA VV+     E+AA ++ A    +G + + 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAA---TLGEGHLG  100

Query  59   IRANVSSTEDVNEMFKAALEHFGVIDILVNNAGITRDNLIMRMKEDEWDDVIATNLKGVF  118
            + ANV+   +V++   + +EHFG ID+LVNNAGIT+    + ++ ++ D V+  +L+G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCVKAATRPMMKQRSGKIINITSVVGVLGNA--GQANYVAAKAGVIGLTKTAARELASRN  176
               +A    M  Q SG I+ ++SV +  G +  G ++Y AAKAGV+GL K+ ARE+++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVAPGFIDTEMTA-VLPEDVKAGLTSQIPLARLGQTDDIASVVLFLASDAANYMTG  235
            I +N++APG+I+T++T+ ++ ++ + ++   IPL+RLG ++D+A+  LFLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  QTLHVDGGM  244
             TL+V+GGM
Sbjct  281  ITLDVNGGM  289

499) Cpha266_2492 in NC_008639


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (516),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 173/250 (70%), Gaps = 8/250 (3%)

Query  1    MLKGKIAVITGAA--RGIGQAIAFDFASRGADLVLCDIKKEWLPETAEGVEKRGQKAYCY  58
            +L+GKIA+ITGAA  RGIG+A A  FA +GA +V+ D+      ++A  +   G+     
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLGL  101

Query  59   ELDVTSTESVQDVFNAITTETGRIDILVNNAGITRDGLLMRMSEEDWDAVLSVNLKGTFS  118
              +V+    V++   +I  + GRID+LVNNAGIT+    + +   D D VL V+L+GT+ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CTKAVSRTMMKQRSGSIVNIASVIGIMGNA--GQANYAASKGGVISFTKSIAKELASRNI  176
             ++AV  TM  Q SGSIV ++SV +  G +  G ++Y+A+K+GV+++ K++A+E+++ +I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  177  RVNAVAPGFISSKMTDAL-SEELRNKMLDVIPLARFGQPEDVANVVSFLASDQSAYITGV  235
            R+N++APG+I + +T++L  +E R+ +++ IPL+R+G ++DVAN   FLASD S+Y+TG+
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  236  VINISGGMVM  245
             ++++GGM++
Sbjct  282  TLDVNGGMLI  291

500) Fleli_3714 in NC_018018


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (515),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 168/249 (68%), Gaps = 8/249 (3%)

Query  1    MFSLKDKVAIVTGGA--KGIGKAVAENFHKAGAKIVIWDLDEEGQK-VADSL-KGKF-YK  55
            +  L++K+AI+TG+A  +GIG+A A  F + GA++VI DLDE + +  A +L  G +   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  56   VNTADREELEKTTKQVIADFDRIDILINNAGILRDSSFLKMTDDFWDDVINVNLTGVYNC  115
             N AD  ++ ++   +I +F+RID+L+NNAGI +    L +  +  D V++V+L G    
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  116  AKVVVPYMKSQKYGRIINASSIAGVYGN--FGQTNYSAAKAGVIGFTKSLAREVGKNGIT  173
            ++ V+P M++Q  G I+  SS+++  G   FG  +YSAAKAGV+G+ K++ARE G + I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  174  VNAIAPGYIQTEMTASI-PKEFQEKIIASIPVRRAGKPEDVANAYLYLASEEAGFVNGSV  232
            +N+IAPG I+T++T+++   E ++ II +IP+ R G ++DVANA L+LAS+ ++++ G  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  233  LHVDGGGMI  241
            L+V+GG +I
Sbjct  283  LDVNGGMLI  291

501) Bacsa_2971 in NC_015164


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (515),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 111/249 (45%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  3    LLTGKTAIITGAA--RGIGKAIALKFAAEGANIAFTDLVIDENGKKTEEEIAALGVKAKG  60
            LL GK AIITGAA  RGIG+A A+ FA +GA + + DL  DE++ +  +  A+LG    G
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAAR--DAAATLGEGHLG  100

Query  61   YASNAASFEDTAKVVEQIHADFGSIDILVNNAGITKDGLMMRMSEGQWDAVINVNLKSAF  120
             A+N A   +  + V  I  +FG ID+LVNNAGIT+    + +  G+ D V++V+L++++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NFIHACTPIMMRQRSGNIINMASVVGVHGNA--GQCNYAASKAGLIALAKSIAQELGSRG  178
               +A  P M  Q SG+I+ M+SV + +G +  G  +Y+A+KAG+++L+K++A+E+G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRANAIAPGFIITDMTAQL-SDEVKAEWNKRIPLRRGGTPEDVANIALFLASDMSSYVSG  237
            IR N+IAPG+I TD+T+ L  DE +      IPL R G+++DVAN ALFLASD+SSY++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIQVDGGM  246
              ++V+GGM
Sbjct  281  ITLDVNGGM  289

502) Gura_1877 in NC_009483


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (515),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 162/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLNGRVAVITGAS--RGIGKAVALKLAAEGADLVVTATSLEAARMTADEIIQLGGKALA  58
            M L+G++A+ITGA+  RGIG+A A+ +A +GA +V+      AAR   D    LG   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR---DAAATLGEGHLG  100

Query  59   LKVDVSITEEVESLFHKTIEEFGRVDILINNAGITRDGLLLRMKEADWDAVLDVNLKGAF  118
            L  +V+   +V       IE+FGR+D+L+NNAGIT+    L ++ +D D VLDV+L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCTREAAKYMTKARYGRIVNISSVVGEIGNA--GQVNYCASKAGMFGLTKATARELAKRN  176
              ++     M     G IV +SSV ++ G +  G  +Y A+KAG++GL KA ARE++  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVSPGFIETDMT-GVLSEKVRENLLQQIPLERLGQPEDIAAAVYFLVSAQSGYITG  235
            I +N+++PG+I+TD+T G++ +  R+ +++ IPL RLG ++D+A A  FL S  S+Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  HVLSVNGGM  244
              L VNGGM
Sbjct  281  ITLDVNGGM  289

503) fabG in NC_009338


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (514),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 103/248 (42%), Positives = 172/248 (70%), Gaps = 7/248 (2%)

Query  1    MSLLTGQTAVITGGA--QGLGFAIAQRFVDEGARVVLGDVNLEATQEAAEKLGGADVAHA  58
            + LL G+ A+ITG+A  +G+G A A  F ++GARVV+ D++  A+++AA  LG ++++ A
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   VRCDVTSSaevdalvaaavdTFGALDIMVNNAGITRDATMRKMTEDDFDKVIAVHLKGTW  118
               +V+  ++V   VA+ ++ FG +D++VNNAGIT+      +  +D+DKV+ V L+GT 
Sbjct  103  A--NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NGLRAAAAIMRENKRGVIVNMSSISGK--VGMIGQTNYSAAKAGIVGMTKAASKELAYLG  176
               +A  + MR +  G IV MSS+S++   G++G  +YSAAKAG++G+ KA ++E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAIQPGLIRSAMTEA-MPQRIWDSKVAEVPLGRAGEPDEVAKVALFLASDLSSYMTG  235
            +R+N+I PGLI++ +T + M +  +++ +  +PLGR G +++VA+ ALFLASDLSSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  TVLEVTGG  243
              L+V GG
Sbjct  281  ITLDVNGG  288

504) Shew_1603 in NC_009092


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (515),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 100/244 (41%), Positives = 164/244 (68%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRAVAETLVEAGALVIGTATSERGAAAIQEYLGDKGHGLVLNV  64
            L GK+A++TGA+  RGIGRA A T+ + GA V+     E +A      LG+   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSESIDHLFASIKEKVGEVDILVNNAGITRDNLLMRMKEDEWTDIIDTNLTSLYRTSKQ  124
            +D   + +  A+I E  G +D+LVNNAGIT+    + ++ ++   ++D +L +    S+ 
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VLRAMMKKRSGRIINIGSVVGTMGNA--GQTNYCAAKAGLIGFTKSLAREVASRQITVNA  182
            V+ +M  + SG I+ ++SV +  G +  G  +Y AAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDELTEEQQK-GIMSQVPMERLGQPQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L +++++ +I+  +P+ RLG +Q++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

505) Ser39006_3116 in NC_022268


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (514),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 105/246 (43%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MIFDGKIALVTGAS--RGIGRAIAEVLVARGAKVIGTATSEKGAADISAWLGEKGKGYLL  58
            M+++GKIA++TGA+  RGIGRA A  +  +GA+V+     E +A D +A LGE   G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVADAASIESVLASIHAEFGDIDILVNNAGITRDNLLIRMKNDEWQDVLDTNLSSVFRLS  118
            NVAD + +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + VLD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRTMMKKRFGRIITIGSVVGSSGNP--GQANYAAAKAGLIGFSKSLACEVASRGITV  176
            +AV+ TM  +  G I+ ++SV +  G    G ++Y+AAKAG++G++K++A E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDEQRAGILADVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  DE+R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

506) Desca_1086 in NC_015565


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (513),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 105/255 (42%), Positives = 168/255 (66%), Gaps = 15/255 (5%)

Query  1    MFLNGKVAIVTGAS--RGIGKAIALAMAGAQADIVVNYAGRSEAAEETAAAIRQLGRRAL  58
            M+L+GK+AI+TGA+  RGIG+A A++ A   A +V+   + S A + +A+    LG   L
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT----LGEGHL  99

Query  59   VHRADVSNTQEVQQMVEATIAEFGKVDILVNNAGITRDNLILRMKEEDWDTVLAVNLKSA  118
               A+V++  +V+Q V + I +FG++D+LVNNAGIT+    L ++  D D VL V+L+++
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FNTIKAVAKPMVKARYGRIINVSSVV-----GIYGNPGQANYAAAKAGLIGLTKTMAKEL  173
            +   +AV   M     G I+ +SSV      GI+G P   +Y+AAKAG++GL K+MA+E+
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGP---HYSAAKAGVLGLGKAMAREF  216

Query  174  GPRNITVNAVAPGFITTDMTEHL-STEAKEKLTSSIALNRLGRPEDVASLVAFLASDFCG  232
            GP +I +N++APG+I TD+T  L   E ++ +  +I+L RLG ++DVA+   FLASD+ +
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  233  YITGQVIAVDGGLTI  247
            Y+TG  + V+GG+ I
Sbjct  277  YLTGITLDVNGGMLI  291

507) Tmel_1835 in NC_009616


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (514),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 105/253 (42%), Positives = 170/253 (68%), Gaps = 14/253 (5%)

Query  1    MRLEGKVCIITGAGS--GIGKAAALLFSQEGAKVIACdvveenlkklkeeddRIDV-FVL  57
            M L+GK+ IITGA+S  GIG+A+A+ F+Q+GA+V+  D+ E   +      +  ++ +  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  58   DVTNREAIQNMVDNVVEKYGRIDVLVNNAGITRDALLLKMKEEDWDAVINVNLKGVFNMT  117
            +V++   +++ V  ++E +GRIDVLVNNAGIT+    L ++  D D V++V+L+G + M+
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  118  QAIAPIMLKQGKGSIINTSSVV-----GVYGNIGQTNYSATKAGIIGMTKTWAKELARKG  172
            QA+ P M  QG GSI+  SSV      G++G     +YSA+KAG++G+ K+ A+E++   
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMAREFGPD-  219

Query  173  AQIRVNAVAPGFIKTPMTEKV-PERIINALNEKIPLKRMGEAEEVARVYLFLASDESSYI  231
             QIR+N++APG+I T +T  +  +   +A+ E IPL R+G A++VA   LFLASD SSY+
Sbjct  220  -QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  232  TGQVIGVDGGLVI  244
            TG  ++V+GG++I
Sbjct  279  TGITLDVNGGMLI  291

508) fabG in NC_018065


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (513),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 151/223 (68%), Gaps = 5/223 (2%)

Query  25   FLEEGAKVAIVDYDKQQGEKMEAELGENVAFFAVDVSKLADVKEMVEQVVDRFGKIDILI  84
            F ++GA+V I+D D   +    A LGE    +A +V+  ++VK+ V  ++++FG+ID+L+
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLV  129

Query  85   NNAGITRDATLVKMSEEDFEKVIQINLNGVYYCTQAVAPHMIAQGSGKIISTSSVSGVYG  144
            NNAGIT+    + +   D++KV++++L G    +QAV P M AQGSG I+  SSVS+  G
Sbjct  130  NNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRG  189

Query  145  N--FGQTNYAATKAAIIGMTKTWAKELGRKGINVNAVAPGFTATPMVEKMPEKVLQQ--M  200
               FG  +Y+A+KA+++G+ K+ A+E+G   I +N++APG+  T +   + +   ++  +
Sbjct  190  GGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAII  249

Query  201  EGITSLQRLGIPEDIANAYLFLASDEASYITGHVLQVDGGIMM  243
            EGI +L RLG ++D+ANA LFLASD +SY+TG  L+V+GG+++
Sbjct  250  EGI-PLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

509) LC40_0223 in NC_017465


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (513),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 175/252 (70%), Gaps = 13/252 (5%)

Query  1    MELKDKVVFITGST--RGIGAATALAFAKQGSRLVLNGRHDLDDDMKQKLEEA-GADYKF  57
            M L++K+ +ITG++  RGIG ATA++FA++G+R+V+    DLD+   +    + G +   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI---LDLDESAARDAAATLGEGHLG  100

Query  58   LIGDVADEESVAQLAKEAWDAYGHIDVLVNNAGITRDRLIGGMKVADFDQVIAVNLRGPF  117
            L ++VADE  V Q      + +G+IDVLVNNAGIT+     +++ +D+D+V+ V+LRG +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  LLIKALIKKFNKQRSGAIINLASVVGLHGNA--GQANYSASKAGIVGLTKTVAREGAMRG  175
            L+ +A+I     Q SG+I+ ++SV + +G +  G ++YSA+KAG++GL K++ARE +   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  IRCNAIAPGMIASDMTAAL--SERVQEGIVEQIPLKRLGTVDEVAQCAIFLAQN--DYVT  231
            IR N+IAPG+I +D+T++L   ER +++I+E IPL RLG+ ++VA+ A+FLA +   Y+T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  232  GQVLVVDGGMTI  243
            G  L V+GGM I
Sbjct  280  GITLDVNGGMLI  291

510) LBFF_0333 in NC_021235


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (513),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 175/252 (70%), Gaps = 13/252 (5%)

Query  1    MELKDKVVFITGST--RGIGAATALAFAKQGSRLVLNGRHDLDDDMKQKLEEA-GADYKF  57
            M L++K+ +ITG++  RGIG ATA++FA++G+R+V+    DLD+   +    + G +   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI---LDLDESAARDAAATLGEGHLG  100

Query  58   LIGDVADEESVAQLAKEAWDAYGHIDVLVNNAGITRDRLIGGMKVADFDQVIAVNLRGPF  117
            L ++VADE  V Q      + +G+IDVLVNNAGIT+     +++ +D+D+V+ V+LRG +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  LLIKALIKKFNKQRSGAIINLASVVGLHGNA--GQANYSASKAGIVGLTKTVAREGAMRG  175
            L+ +A+I     Q SG+I+ ++SV + +G +  G ++YSA+KAG++GL K++ARE +   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  IRCNAIAPGMIASDMTAAL--SERVQEGIVEQIPLKRLGTVDEVAQCAIFLAQN--DYVT  231
            IR N+IAPG+I +D+T++L   ER +++I+E IPL RLG+ ++VA+ A+FLA +   Y+T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  232  GQVLVVDGGMTI  243
            G  L V+GGM I
Sbjct  280  GITLDVNGGMLI  291

511) LAF_0313 in NC_010610


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (513),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 175/252 (70%), Gaps = 13/252 (5%)

Query  1    MELKDKVVFITGST--RGIGAATALAFAKQGSRLVLNGRHDLDDDMKQKLEEA-GADYKF  57
            M L++K+ +ITG++  RGIG ATA++FA++G+R+V+    DLD+   +    + G +   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI---LDLDESAARDAAATLGEGHLG  100

Query  58   LIGDVADEESVAQLAKEAWDAYGHIDVLVNNAGITRDRLIGGMKVADFDQVIAVNLRGPF  117
            L ++VADE  V Q      + +G+IDVLVNNAGIT+     +++ +D+D+V+ V+LRG +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  LLIKALIKKFNKQRSGAIINLASVVGLHGNA--GQANYSASKAGIVGLTKTVAREGAMRG  175
            L+ +A+I     Q SG+I+ ++SV + +G +  G ++YSA+KAG++GL K++ARE +   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  IRCNAIAPGMIASDMTAAL--SERVQEGIVEQIPLKRLGTVDEVAQCAIFLAQN--DYVT  231
            IR N+IAPG+I +D+T++L   ER +++I+E IPL RLG+ ++VA+ A+FLA +   Y+T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  232  GQVLVVDGGMTI  243
            G  L V+GGM I
Sbjct  280  GITLDVNGGMLI  291

512) Btus_1260 in NC_014098


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (513),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 161/248 (65%), Gaps = 8/248 (3%)

Query  1    MDLTGKIAIVTGAA--KGIGREIAFLLAKHGADVTVADLDQEGADAVAEEIRSLGRRSRG  58
            M L GKIAI+TGAA  +GIGR  A  +A+HGA V + DLD+ +A   A    +LG    G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLG  100

Query  59   VQVNVANRPEVTAMVRDTIEHFGDLDILVNNAGITRDAMLHKMTEEQFDEVIAVHMKGTF  118
            +  NVA+ ++V   V   IEHFG +D+LVNNAGIT+      +   ++D V+ V ++GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  LCMQAAAIHMREKRKGKIVNISSIAGKVGN--IGQVNYSGAKAGIVGMTKAAAKELAKYG  176
            L  QA    MR +  G IV +SS++++ G   +G  +YS+AKAG++G+ KA A+E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VCVNAVQPGFIDTDMTRAV-PEKVRQIKIAEIPMERIGVPLDIAKAVVFLSSDYSDYMTG  235
            + +N++ PG+I+TD+T ++  +  R+  I  IP+ R+G + D+A+A +FL+SD S Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  TVLEVTGG  243
              L+V GG
Sbjct  281  ITLDVNGG  288

513) Pjdr2_5377 in NC_012914


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 173/248 (70%), Gaps = 8/248 (3%)

Query  4    LADKVAIITGAGS--GMGREEALLFAREGAKVVATDINEAAVLAVVKEIEAEGGVATAIA  61
            L +K+AIITGA+S  G+GR  A+ FA++GA+VV  D++E+A       + +EG ++  +A
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGHLG--LA  102

Query  62   HNVASEEQWISVIAAALEAYGRIDILVNNAGISFAVGMLDTTVEQWDKVMNINLSSVFLG  121
             NVA E Q    +A+ +E +GRID+LVNNAGI+ ++  LD    + DKV++++L + +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  122  MKHVVPHMQKNNGGSIVNISSIAGITGSQ--GAGAYTASKGAVRMLSKAAAVDYGKDNIR  179
             + V+P M+ + +GSIV +SS+++  G+   G+  Y+A+K++V  L+KA A ++G D+IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  180  VNSVHPGFIETPMSKEFVGNEQMLAWFLSQTALPRVGQAVEVAKAVLFLASDDASYLTGI  239
            +NS+ PG+I+T ++  ++ +E+  A ++   +L R+G A +VA+A LFLASD +SYLTGI
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHA-IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  ELPVDGGV  247
             L V+GG+
Sbjct  282  TLDVNGGM  289

514) RTO_10390 in NC_021015


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 108/250 (44%), Positives = 172/250 (69%), Gaps = 13/250 (5%)

Query  5    LTGKVAVVTGAS--RGIGRAIALRLAQEGAAVVI-NYNGSKERAQEVKTEIESAGGTAQI  61
            L GK+A++TGA+  RGIGRA A+ +AQ+GA VVI + + S  R      +  ++ G +++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR------DAAATLGEGHL  99

Query  62   -MQCDVADAASCDEMFQTIIKEFGRIDILVNNAGITRDGLLMKMAEEDFDAVIDTNLKGT  120
             +  +VAD +   +   TII +FGRID+LVNNAGIT+    + +   D+D V+D +L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  FHCIRAVSRQMLRQRSGRIINLSSVSGVLGNA--GQANYSASKAGVIGLTKSAARELASR  178
            +   +AV   M  Q SG I+ +SSVS+  G +  G ++YSA+KAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  179  GITVNAIAPGFINTEMT-EVLSEKVKEGATAQIPLGKFGETEDIANAAAFLASDEARYIT  237
             I +N+IAPG+I+T++T  ++ +  +++    IPLG++G ++D+ANAA FLASD + Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  238  GQTLHIDGGM  247
            G TL+++GGM
Sbjct  280  GITLDVNGGM  289

515) RHA1_ro03841 in NC_008268


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 107/253 (43%), Positives = 170/253 (68%), Gaps = 10/253 (3%)

Query  6    RTAVITGATSERGIGLATARRYAEEGWAIVVLDLDGEKSAKVAAEIGNEFGVPAFGHDID  65
            + A+ITGA+SERGIG ATA  +A++G  +V+LDLD   +   AA +G+      +G   +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HLGLAAN  104

Query  66   VADENSVQRAHDGVAAEVAGGNLPAVGALANIAGITSPVPFLETTLELWNKVMAVNATGT  125
            VADE+ V++A   VA+ +   ++  ++ L N AGIT P+  L+      +KV+ V+  GT
Sbjct  105  VADESQVKQA---VATIIE--HFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  126  YLVTRAFLPAMIDNGWGRVVNMSSVSAQRGGGVFGKVPYSSAKAAVLGFTKSLARELGDS  185
             L+++A +P+M  +G G +V MSSVSAQRGGG+FG   YS+AKA+VLG+ K++ARE+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  186  GVTVNAVTPGAVDTSIRVG-STAEQEAALCRDIPLGRvatttevaavITFLSSQDAAYLT  244
             + +N+++PG ++T I  G    E+  A+  +IPLGR++++ +VA    FL+S+ ++YLT
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  245  GTTVDINGGSHLH  257
            G T+D+NGG  +H
Sbjct  280  GITLDVNGGMLIH  292

516) Caur_3422 in NC_010175


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 105/253 (42%), Positives = 173/253 (69%), Gaps = 9/253 (3%)

Query  2    LLDLSGRVAIVTGGS--RGIGRATAERLAGSGAAVVVNYRGNaaaaeatvaaitaaggta  59
            L+ L G++AI+TG++  RGIGRATA  +A  GA VV+          A+  A ++ G   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL----DLDESAARDAAATLGEGH  98

Query  60   iavQGDVSQPADVEQMVKTTLERFGRIDILVNNAGITRDTLLLRMKESDFDEVIATNLRG  119
            +++ ++V++ ++V Q V T +E+FGRID+LVNNAGIT+    L ++ +D+D V+  +LRG
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  120  VFLCTRAVLRPMTKQRFGRIINITSVVGLTGNV--GQANYAAAKAGILGFTKSTAREMAS  177
             +L ++AV+  M  Q  G I+ ++SV +  G    G ++Y+AAKAG+LG+ K+ ARE ++
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  178  RGITVNAIAPGFIETEMTEALNEEARK-AILATIPLGRFGQPAEVAGLVCFLASDAGAYI  236
              I +N+IAPG+I+T++T +L ++ R+ AI+  IPLGR+G + +VA    FLASD ++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  SGQTLTIDGGMVM  249
            +G TL ++GGM++
Sbjct  279  TGITLDVNGGMLI  291

517) Chy400_3683 in NC_012032


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 105/253 (42%), Positives = 173/253 (69%), Gaps = 9/253 (3%)

Query  2    LLDLSGRVAIVTGGS--RGIGRATAERLAGSGAAVVVNYRGNaaaaeatvaaitaaggta  59
            L+ L G++AI+TG++  RGIGRATA  +A  GA VV+          A+  A ++ G   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL----DLDESAARDAAATLGEGH  98

Query  60   iavQGDVSQPADVEQMVKTTLERFGRIDILVNNAGITRDTLLLRMKESDFDEVIATNLRG  119
            +++ ++V++ ++V Q V T +E+FGRID+LVNNAGIT+    L ++ +D+D V+  +LRG
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  120  VFLCTRAVLRPMTKQRFGRIINITSVVGLTGNV--GQANYAAAKAGILGFTKSTAREMAS  177
             +L ++AV+  M  Q  G I+ ++SV +  G    G ++Y+AAKAG+LG+ K+ ARE ++
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  178  RGITVNAIAPGFIETEMTEALNEEARK-AILATIPLGRFGQPAEVAGLVCFLASDAGAYI  236
              I +N+IAPG+I+T++T +L ++ R+ AI+  IPLGR+G + +VA    FLASD ++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  SGQTLTIDGGMVM  249
            +G TL ++GGM++
Sbjct  279  TGITLDVNGGMLI  291

518) Desmer_3745 in NC_018515


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 104/250 (42%), Positives = 171/250 (69%), Gaps = 9/250 (3%)

Query  1    MMLKDSVGIVTGSG--RGIGRAIAVNLAAAGVKVVVNYAGRADKAEETVELIRAAGGEav  58
            M+L++ ++I+TG++  RGIGRA AV +A  G +VV+   + +   + +  L    G   +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHL  99

Query  59   avqadvsqqadvdRLLKTAIENYGKIDILVNNAGITRDTLLLRMKEADWDAVLETNLKGV  118
            ++ A+V+++++V + + T IE++G+ID+LVNNAGIT+    L ++ +D D VL+ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSKGMLKQRSGVIVNISSIVGLSGNP--GQANYAAAKAGIIGFTKSVAKEFASR  176
            +L ++AV   M  Q SG IV +SS+ +  G    G ++Y+AAKAG++G+ K++A+EF++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GIRVNVVAPGYISTDMTGTL-PEGTQADILKGIPLGRIGSPEDVANVVRFLVSPEASYIT  235
             IR+N +APG I TD+TG L  +  +  I+ GIPLGR+G+++DVAN   FL S  +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGM  245
            G TL V+GGM
Sbjct  280  GITLDVNGGM  289

519) FAES_1907 in NC_020054


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 172/253 (68%), Gaps = 15/253 (5%)

Query  3    LVAGKVALITGAS--RGIGRAIALRFAQEGANVAFTYLSSVEKGQALEAELAAFGIKAKG  60
            L+ GK+A+ITGA+  RGIGRA A+ FAQ+GA V +  L   + + A +A  A++G    G
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL---DESAARDAA-ATLGEGHLG  100

Query  61   YRSDASDFKAADDLVMQVLADFGTLDVLINNAGITRDGLLMRMSEQQWDEVLTVNLKSVF  120
              ++ +D     + V  ++ +FG +DVL+NNAGIT+    + +   + D VL V+L++ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NLTKAAIRPMMKAKAGSIINLTSVVGLRGNA--GQANYAASKAGIIGFTKSVALELGSRN  178
             +++A I  M    +GSI+ ++SV + RG +  G ++Y+A+KAG++G+ K++A E+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRSNAIAPGFIETEMTGELNEKSIEEWKQS----IPLKRGGQPDEVADACLFLASDLSRY  234
            IR N+IAPG+I+T++TG L +   +E++++    IPL R G +++VA+A LFLASDLS Y
Sbjct  221  IRINSIAPGLIHTDITGGLMQ---DERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  ITGQVLQVDGGML  247
            +TG  L+V+GGML
Sbjct  278  LTGITLDVNGGML  290

520) Theth_1247 in NC_015707


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 107/260 (42%), Positives = 171/260 (66%), Gaps = 24/260 (9%)

Query  1    MRLEGKVCIITGAAS--GIGKAASLLFAKEGAVVCACDV----SKEALENLVQEASGLAG  54
            M L+GK+ IITGAAS  GIG+A+++ FA++GA V   D+    +++A   L +   GLA+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  55   KVDPYVLDVTNREQVSKVVEEIVNKYGKIDVLVNNAGITRDALLLKMTEEEWDAVINVNL  114
                   +V++  QV + V  I++ +G+IDVLVNNAGIT+    L +   + D V++V+L
Sbjct  104  -------NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  115  KGVFNMTQAVAPHMIKAGKGSIINTSSVV-----GIYGNIGQTNYAATKAGVIGMTKTWA  169
            +G + M+QAV P M   G GSI+  SSV      GI+G     +Y+A+KAGV+G+ K+ A
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMA  213

Query  170  KELARKGAQIRVNAVAPGFIKTPMTEK-VPEKIIEAVLARTPLARMGTPEEVAYVYLFLA  228
            +E++    QIR+N++APG+I T +T   + +   +A++   PL+R+G++++VA   LFLA
Sbjct  214  REFGP--DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLA  271

Query  229  SDESSYVTGQVIGVDGGLVI  248
            SD SSY+TG  ++V+GG++I
Sbjct  272  SDLSSYLTGITLDVNGGMLI  291

521) fabG in NC_017030


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 170/249 (69%), Gaps = 10/249 (4%)

Query  4    FKDKVVLVTGGS--RGIGRACAQAFAKAGASTVVISYVGNEAAAQETVGLLQQAGAKAEA  61
            +++K+ ++TG++  RGIGRA A +FA+ GA  V++    +E+AA+++ + L   G    +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAATL---GEGHLG  100

Query  62   VKFDLADTAACAGAIDGVVKTHGRLDVLVNNAGMAIDGLVMRVKDEDWDRQLDTNLRGAF  121
            +  ++AD +    A+  ++   GR+DVLVNNAG++     + ++  D D+ LD +LRG++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  ALIRAASRPMMKQRSGAIINITSVVGEMGNP--GQAAYSAAKAGLIGLTKSVAKELATRS  179
             + +A    M  Q SG+I+ ++SV ++ G    G + YSAAKAG++GL K++A+E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  IRVNAVSPGFIGTDMTSHL-DDELRQKMVGGIALGRLGNPEEVAGAVVFLASDAASYITG  238
            IR+N+++PG+I TD+T+ L +DE R+ ++ GI+LGRLG +++VA A +FLASD +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  EVLKVNGGM  247
              L VNGGM
Sbjct  281  ITLDVNGGM  289

522) FB2170_10901 in NC_014472


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 103/257 (41%), Positives = 176/257 (69%), Gaps = 19/257 (7%)

Query  1    MKILDGKNVIITGAS--RGIGKGIAEVFADHGANVAFTYSSSEAPALQLEKDLTSKGVKA  58
            + +L+GK  IITGA+  RGIG++ A  FA+HGA V +         L+L+   +  +  +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI---------LDLDESAARDAAAT  93

Query  59   --KAYKSNAASFQESADL---VAKVLEDFGGIDVLINNAGITKDNLLMRMGEEDFDQVIE  113
               +  + AA+  + +++   VA ++E+FG IDVL+NNAGIT+    + +   D+D+V++
Sbjct  94   LGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLD  153

Query  114  INLKSVFNMTKAVQRTFLKQRKGSIINMSSVVGVKGNA--GQTNYAASKAGMIGFTKSVA  171
            ++L++ + M++AV  T   Q  GSI+ MSSV + +G +  G  +Y+A+KAG++G+ K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  172  LELGSRNIRCNAIAPGFIETEMTAKL-DEKVVQGWRDGIPLKRGGSTEDIANACLFFASD  230
             E+G+ +IR N+IAPG+I+T++T+ L ++   ++  +GIPL R G+++D+ANA LF+ASD
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD  273

Query  231  LSAYVTGQVLNVDGGML  247
            LS+Y+TG  L+V+GGML
Sbjct  274  LSSYLTGITLDVNGGML  290

523) Geoth_2732 in NC_015660


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 170/252 (68%), Gaps = 11/252 (4%)

Query  1    MLQGKVALVTGAS--RGIGRAIALELARQGAKIAV-NYAGSEAKANEVVGEIKNMGGEaf  57
            +LQGK+A++TGA+  RGIGRA A+ +A++GA++ + +   S A+          +G   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA-----TLGEGHL  99

Query  58   aiqadvadaqavEQMVKTVLERFERIDILVNNAGITRDNLLMRMKEEEWDDVININLKGV  117
            ++ A+VAD   V Q V T++E+F RID+LVNNAGIT+    + ++  + D V++++L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FNCTKAVTRPMMKQRYGRIVNIASVVGVMGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +  ++AV   M  Q  G IV ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFITTDMTERL-SEEIKSEMLKQIPLARFGEPEDVAKVVAFLVSDAASYMT  234
            +I +N++APG+I TD+T  L  +E +  ++  IPL+R+G ++DVA+   FL SD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

524) GY4MC1_2719 in NC_014650


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 170/252 (68%), Gaps = 11/252 (4%)

Query  1    MLQGKVALVTGAS--RGIGRAIALELARQGAKIAV-NYAGSEAKANEVVGEIKNMGGEaf  57
            +LQGK+A++TGA+  RGIGRA A+ +A++GA++ + +   S A+          +G   +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA-----TLGEGHL  99

Query  58   aiqadvadaqavEQMVKTVLERFERIDILVNNAGITRDNLLMRMKEEEWDDVININLKGV  117
            ++ A+VAD   V Q V T++E+F RID+LVNNAGIT+    + ++  + D V++++L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FNCTKAVTRPMMKQRYGRIVNIASVVGVMGNP--GQANYVAAKAGVIGLTKTAARELASR  175
            +  ++AV   M  Q  G IV ++SV +  G    G ++Y AAKAGV+GL K+ ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFITTDMTERL-SEEIKSEMLKQIPLARFGEPEDVAKVVAFLVSDAASYMT  234
            +I +N++APG+I TD+T  L  +E +  ++  IPL+R+G ++DVA+   FL SD +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLHVDGGMVM  246
            G TL+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

525) Aazo_3207 in NC_014248


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 104/254 (41%), Positives = 176/254 (70%), Gaps = 13/254 (5%)

Query  1    MTLLHDQVAIVTGAS--RGIGRAITLQLASQGAKVVINYANSSAAADQLVAKITAKGGDA  58
            + LL++++AI+TGA+  RGIGRA ++ +A +GA+VVI   + SAA D      ++ G + 
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDA----AATLGEGH  98

Query  59   ITLQADVSQSDQVDTLINTTLEKFKRIDILVNNAGITRDTLLLRMKLEEWQAVIDLNLTG  118
            + L A+V++  QV   + T +E F RID+LVNNAGIT+    L ++  + + V+D++L G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFLCTKAVSKTMLRQRSGRIINISSVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELAS  176
             +L ++AV  TM  Q SG I+ +SSV++Q G    G ++YSAAKAGV+G+ K++A+E+++
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGITVNAVAPGFITTDMTSNIAAE----GILQYIPLGRFGEPEDIAGMVSFLAADPAAAY  232
              I +N++APG+I TD+T+ +  +    +I++ IPLGR+G ++D+A    FLA+D  ++Y
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSY  277

Query  233  ITGQVFNVDGGMVM  246
            +TG  ++V+GGM++
Sbjct  278  LTGITLDVNGGMLI  291

526) EC1_01270 in NC_021019


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (512),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 108/249 (44%), Positives = 168/249 (68%), Gaps = 11/249 (4%)

Query  5    NKTALITGAA--KGIGKAVALAFAKEGYNIVI-NYNGSKEAALNTQQEIEALGVKTLVVQ  61
             K A+ITGAA  +GIG+A A++FA++G  +VI + + S      +++   +LG   L + 
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDES-----AARDAAATLGEGHLGLA  102

Query  62   ADVSDEDQVKTMVEKSIETFERIDVLVNNSGINKDGLMLRMSYEDFHKVIAVNLEGTFNC  121
            A+V+DE QVK  V   IE F RIDVLVNN+GI +    L +   D++KV+ V+L GT+  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  122  IKHVSRIMMKQRSGSIINMSSVVGIMGNA--GQANYASSKAGVLGLTKSAARELALRHIR  179
             + V   M  Q SGSI+ MSSV +  G +  G ++Y+++KAGVLGL K+ ARE++  +IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  180  VNAIAPGFIETDMTAKLAEKDKAK-MMEQIPLRQFGQPEDVANVCVALASDAFKYVTGQT  238
            +N+IAPG+I+TD+T+ L + ++   ++E IPL ++G ++DVAN  + LASD   Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  239  IHVDGGMIM  247
            ++V+GGM++
Sbjct  283  LDVNGGMLI  291

527) Ornrh_2321 in NC_018016


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (512),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 174/251 (70%), Gaps = 16/251 (6%)

Query  3    LLKGKVAIVTGAT--RGIGKGILEKFVENGAKVAFTYassaeaakaleekYGESVKGFQS  60
            LL+GK+AI+TGA+  RGIG++    F ++GA+V +       AA+      GE+  G+ +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATLGEGHLGLAA  103

Query  61   DASDFDAAQELVNQVIEAFGQIDIVVNNAGITK--DNLLMRMGYEDWEKVIKVNLDSAFN  118
            + +D    ++ V  +IE FG+ID++VNNAGIT+    L +R G  D +KV+ V+L +++ 
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPG--DYDKVLDVSLRGTLL  161

Query  119  LTKAVLRPMLKQRSGSIINMSSVVGLQGNA--GQANYAASKAGLLGFTKSVALELGSRNI  176
            +++AV+  M  Q SGSI+ MSSV + +G +  G ++Y+A+KAG+LG+ K++A E+G+ +I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  177  RCNAIAPGFIETEMTAKLDEKVVEEWRNN----IPLRRGGTPEDIANACLYLGSELSSYV  232
            R N+IAPG+I+T++T+ L +   +E+R+     IPL R G+++D+ANA L+L+S+LSSY+
Sbjct  222  RINSIAPGLIHTDITGGLMQ---DERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  233  TGQVLSVDGGM  243
            TG  L V+GGM
Sbjct  279  TGITLDVNGGM  289

528) fabG in NC_008611


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (512),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 100/243 (42%), Positives = 164/243 (68%), Gaps = 7/243 (2%)

Query  13   PVVTGGA--QGLGLAIAERFVSEGARVVLGDVNLEATEAAAKQLGGGEVAVAVRCDVTKA  70
            +++TG+A  +G+G A A  F  +GARVV+ D++  A+  AA  LG G++++A   +V+  
Sbjct  51   AIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADE  108

Query  71   DEVETLLQAALERFGGLDIMVNNAGITRDATMRKMTEEQFDQVIDVHLKGTWNGIRLAAA  130
             +V   + + +E+FG +D++VNNAGIT+      +   ++D+V+DV L+GT    +   +
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  131  IMRENKRGAIVNMSSVSGK--VGMVGQTNYSAAKAGIVGMTKAAAKELAHVGVRVNAIAP  188
             MR +  G+IV MSSVS++   G+ G  +YSAAKAG++G+ KA A+E++   +R+N+IAP
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAP  228

Query  189  GLIRSAMTEAMPQRIWDQKLAE-VPMGRAGEPSEVASVALFLACDLSSYMTGTVLDVTGG  247
            GLI++ +T ++ Q  + + + E +P+GR G + +VA+ ALFLA DLSSY+TG  LDV GG
Sbjct  229  GLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGG  288

Query  248  RFI  250
             +I
Sbjct  289  MLI  291

529) Geob_2614 in NC_011979


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (512),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 168/250 (68%), Gaps = 10/250 (4%)

Query  1    MSLNGRVAIVTGAS--RGIGKAVALKLAADGADLVVTATSLETAQATADEITSA-GGNAL  57
            M L+G++AI+TGA+  RGIG+A A+ +A +GA +V+    L+  +++A + +++ G   L
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHL  99

Query  58   AVKADVSVTAEVEGLFAAAVKKFGRIDILVNNAGITRDGLLLRMKDDDWNAVLDINLKGA  117
            ++ A+V+  ++V    A+ +  FGRID+LVNNAGIT+    L ++ +D + VLD++L+G+
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FNCTREAAKYMTKARYGRIVNISSVVGEMGNA--GQVNYCASKAGMFGLTKATARELAKR  175
            +  ++     M     G IV +SSV ++ G +  G  +Y A+KAG++GL KA ARE++  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFIETDMTGTL-SDKVRENLLQQVPLERLGQPEDIAAAVSFLVSTQASYIT  234
            +I +N++APG+I+TD+TG L  D  R+ +++ +PL RLG ++D+A A  FL S  +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GHILSVNGGM  244
            G  L VNGGM
Sbjct  280  GITLDVNGGM  289

530) BVU_0384 in NC_009614


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (512),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 107/249 (43%), Positives = 166/249 (67%), Gaps = 9/249 (3%)

Query  3    LLTGKTAIVTGAA--RGIGKAIALKFAAEGANIAFTDLVIDENGQNTEKEIAALGVKVKG  60
            LL GK AI+TGAA  RGIG+A A+ FA +GA + + DL    +   +    A+LG    G
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL----DESAARDAAATLGEGHLG  100

Query  61   YASNAANFEDTEKVVNQIKDDFGSVDILVNNAGITKDGLMMRMSEAQWDAVIAVNLKSAF  120
             A+N A+  +  + V  I ++FG +D+LVNNAGIT+    + +  ++ D V+ V+L++++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NFIHACTPIMMRQKSGSIINMASVVGVHGNA--GQCNYSASKAGMIGLAKSIAQELGSRG  178
               +A  P M  Q SGSI+ M+SV + +G +  G  +YSA+KAG++GL+K++A+E+G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRANAIAPGFIITDMTAKL-SDEVKAEWAKKIPLRRGGTPEDVADVATFLASDMSSYVSG  237
            IR N+IAPG+I TD+T+ L  DE +      IPL R G+++DVA+ A FLASD+SSY++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIQVDGGM  246
              ++V+GGM
Sbjct  281  ITLDVNGGM  289

531) Glov_1936 in NC_010814


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  139 bits (511),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 172/246 (70%), Gaps = 8/246 (3%)

Query  3    KGKVAVITGAS--RGIGKSIAFALAAQGATIvamdmdqaatdatvaELQASGAKALAVVG  60
            +GK+A+ITGA+  RGIG++ A ++A +GA +V +D+D++A+  + A L   G   L++ +
Sbjct  47   QGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLGLAA  103

Query  61   NVTVAADVERMIDAAVEAFGRVDILVNNAGITRDGLIMRMKDEDWDAVLSVNLKGAFVCT  120
            NV+  ++V + + + +E FGR+D+LVNNAGIT+    + ++  D D VL V+L+G+++ +
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  RTAFKVMSKQRYGRIINIASVVGQMGNA--GQANYCASKAGLIGLTKSNAREMAKRNVTV  178
            ++ +  M  Q  G I+ ++SV +Q G +  G ++Y A+KAG++GL K+ ARE +  ++ +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  179  NAVAPGFIATAMTDAL-PEKVREELAAQIPLERLGSADDIANAVVFLASEASAYITGHVL  237
            N++APG+I T +T++L  +  R+ +   IPL RLG+A+D+ANA +FLAS+ S+Y+TG  L
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  238  SVNGGM  243
             VNGGM
Sbjct  284  DVNGGM  289

532) Ferpe_0221 in NC_017095


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  138 bits (506),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 166/253 (66%), Gaps = 19/253 (7%)

Query  1    MRLDGKVCIITGAGS--GIGRAAAELFAKEGAIVIACDVNETSYENPNIHF------YKL  52
            M L+GK+ IITGA+S  GIGRA+A  FA++GA V+  D++E++  ++   +         
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  53   DVTDRNRIAEVVKDVVEKFGKIDVLVNNAGITRDALIQNMTEEDWDKVINVNLKGVFNMT  112
            +V+D +++ + V  ++E FG+IDVLVNNAGIT+     ++   D DKV++V+L+G + M+
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  113  QAVVPYMLEAGKGSIINTSSVV-----GVYGNIGQTNYAATKAGVIGMTKTWAKEFARKG  167
            QAV+P M   G GSI+  SSV      G++G     +Y+A+KAGV+G+ K+ A+EF+   
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMAREFGPD-  219

Query  168  AQIRVNAVAPGFIKTPMTEKV-PEKILTMMAEKAALKRLGEPIEVAYVYLFLASDESSYI  226
             QIR+N++APG+I T +T  +  +     + E  +L RLG + +VA   LFLASD SSY+
Sbjct  220  -QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  227  TGQVIGVDGGLIL  239
            TG  ++V+GG+++
Sbjct  279  TGITLDVNGGMLI  291

533) Cyast_0838 in NC_019778


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 171/251 (69%), Gaps = 13/251 (5%)

Query  11   LKDQVAVITGAS--RGIGKASAIALATEGAKVVVNYASNSEAADKVVAEITEAGGSAIAL  68
            L++++A+ITGA+  RGIG+A+A+++A +GA+VV+    +S A D   +     G + ++L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT----LGEGHLGL  101

Query  69   KADVSSPDDVDNLFKEAVKAFGKVDILVNNAGITRDTLMLRMKLEDWQKVIDLNLTGVFL  128
             A+V+   +V +     +  FG++D+LVNNAGIT+    L ++  D +KV+D++L G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  129  CCKAVSKMMLKQRSGKIINISSVAGQMGNP--GQANYSAAKAGVIGLTKTLAKEFASRGV  186
              +AV   M  Q SG I+ +SSV++Q G    G ++YSAAKAGV+GL K++A+EF++  +
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  187  TVNAVAPGFIETDMTSGLEADE----ILKFIPLARYGKPEEIAGMIRFLCADTASNYITG  242
             +N++APG+I+TD+T+GL  DE    I+  IPL+R G ++++A    FL +D +S Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS-YLTG  280

Query  243  QVFNVDGGMVM  253
              ++V+GGM++
Sbjct  281  ITLDVNGGMLI  291

534) LBL_0938 in NC_008508


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 173/248 (70%), Gaps = 10/248 (4%)

Query  4    LKGKSAVVTGSA--RGIGKSTALTLAKAGANIVIADLNEESSKATADEMAKQTGGKAIGI  61
            L+GK A++TG+A  RGIG++TA+T+A+ GA +VI DL+E +++ +A  +    G   +G+
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  62   GTNVadadsaakaiqaCVDAFGSVDILVNNAGITKDTLLMRMKKEQWDAVIAVNLTGTYN  121
            ++NVAD     +A+ + ++ FG +D+LVNNAGIT+    + ++  + D V+ V+L GT  
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  CTQAAIKFMMKNPNGGSIINLSSIAGVNGNV--GQTNYSASKAGVIGFTKAVALEMASRK  179
             +QA I   M+   +GSI+ +SS+++  G    G  +YSA+KAGV+G+ KA+A E ++ +
Sbjct  162  MSQAVIP-TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  VRCNAIAPGFIATEMTDAI-PEKIKTAMIAAIPLKRAGQPEDIANTIAFLASDISSFITG  238
            +R N+IAPG+I T++T+++  +  + A+I +IPL R G ++D+AN+  FLASD+SS++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVIEVNGG  246
              ++VNGG
Sbjct  281  ITLDVNGG  288

535) RBRH_02617 in NC_014722


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 169/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQIALVTGAS--RGIGRAIALVLGRAGATVIGTATSDKGAAAISDALHAEGMAGRGVV  62
            L+ +IA++TGA+  RGIGRA A+ +++ GA V+     + +A   + +L    +   G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LDVNDGRAADALVDSVVKEFGALNILVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             +V D       V +++ +FG +++LVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIISITSVVGSTGNP--GQVNYAAAKAGVAGMTRALAREIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMT-RVLPEAQRAALDAQIPLGRLGAPEDVAHAVAFLASAQAGYITGT  238
             +N +APG+I+TD+T  ++ + +R A+   IPLGRLGA++DVA+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

536) fabG in NC_004342


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 166/248 (67%), Gaps = 7/248 (2%)

Query  5    FEGKVALVTGAASPRGLGRAIANTIAKEGGDIVLVDLNKEQIEQAAADVAKEFGVKTLGL  64
            ++GK+A++TGAAS RG+GRA A T+A++G+ +V++DL+    E AA D A  +G   LGL
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLD----ESAARDAAATLGEGHLGL  101

Query  65   SCNVTKPEDCDSVIAGVKEKFGKLDFLVNNAGVLKDNLFIRMSEQEFDFVLDVNLKGVFL  124
            + NV+   +    +A + E FG++D LVNNAG+ +    + +   ++D VLDV+L+G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  125  MTKYASKLLLKAESGRIVNISSVSGLTGQP--GQANYSSSKAGVIALTKVAAREFAGRNV  182
            M++     +    SG IV +SSVS+  G    G ++YS++KAGV++L K  AREF+  ++
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  183  LVNAVCPGYVQTDMTASLPEEVQKKLTDPAFIPLRRPGTQQEIANAVKFFLSDQSNYITG  242
             +N++ PG ++TD+T++L ++ +++ +    IPL R G+ Q++ANA  F+ SD S+Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQD-ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  243  TYLRVDGG  250
              L V+GG
Sbjct  281  ITLDVNGG  288

537) fabG in NC_017551


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 166/248 (67%), Gaps = 7/248 (2%)

Query  5    FEGKVALVTGAASPRGLGRAIANTIAKEGGDIVLVDLNKEQIEQAAADVAKEFGVKTLGL  64
            ++GK+A++TGAAS RG+GRA A T+A++G+ +V++DL+    E AA D A  +G   LGL
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLD----ESAARDAAATLGEGHLGL  101

Query  65   SCNVTKPEDCDSVIAGVKEKFGKLDFLVNNAGVLKDNLFIRMSEQEFDFVLDVNLKGVFL  124
            + NV+   +    +A + E FG++D LVNNAG+ +    + +   ++D VLDV+L+G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  125  MTKYASKLLLKAESGRIVNISSVSGLTGQP--GQANYSSSKAGVIALTKVAAREFAGRNV  182
            M++     +    SG IV +SSVS+  G    G ++YS++KAGV++L K  AREF+  ++
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  183  LVNAVCPGYVQTDMTASLPEEVQKKLTDPAFIPLRRPGTQQEIANAVKFFLSDQSNYITG  242
             +N++ PG ++TD+T++L ++ +++ +    IPL R G+ Q++ANA  F+ SD S+Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQD-ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  243  TYLRVDGG  250
              L V+GG
Sbjct  281  ITLDVNGG  288

538) nfa32290 in NC_006361


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 103/253 (41%), Positives = 163/253 (65%), Gaps = 10/253 (3%)

Query  5    RTAVVTGATSAQGIGLATARRYAEDGWAVVVLDLDGEKSAKVAATIGAEYSVPAFGHEID  64
            + A++TGA+S +GIG ATA  +A++G  VV+LDLD   +   AAT+G       +G   +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----LGLAAN  104

Query  65   VADEDSVTRAHTavaaevaagalppvgalaNIAGITSPVPFLETTLELWNRIMAVNATGT  124
            VADE  V +A            +  ++ L N AGIT P+  L+      ++++ V+  GT
Sbjct  105  VADESQVKQA-----VATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  125  YLVTRAFLPDMLERGWGRVITMSSVSAQRGGGVFGKVPYSSAKAAVLGFTRALARELGDS  184
             L+++A +P M  +G G ++ MSSVSAQRGGG+FG   YS+AKA+VLG+ +A+ARE+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  185  GVTVNAVTPGAVDTAIRVG-STEEQEAAIRRDIPLGRTATTREVASVITFLSSEDAAYLT  243
             + +N+++PG ++T I  G   +E+  AI  +IPLGR +++++VA+   FL+S+ ++YLT
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  244  GTTIDINGGSHIH  256
            G T+D+NGG  IH
Sbjct  280  GITLDVNGGMLIH  292

539) fabG4 in NC_014640


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 109/252 (44%), Positives = 180/252 (72%), Gaps = 3/252 (1%)

Query  4    ALGLLAGKRAIVTGGANPRGIGAAIVDLFIAQGAAVAVLD--QAYPEGASATLAAGRIDL  61
            +L LL GK AI+TG+A+ RGIG A    F  +GA V +LD  ++ + +A+ATL+ G+++L
Sbjct  42   PLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL  101

Query  62   HCDVSRTASCEAAIERARDALGGIDVLVNNAGIVAATRIWDLPEDEFRRMVEVNLTGTYN  121
              +V+  +    A+    + +G IDVLVNNAGI  + +  D+  +++ ++++V+L GT  
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  VTHAALPELLQSPRRPAIVNlgstaalrgggllggshyaasKGGVISFTKALARELGPRG  181
            +++A +P + ++    +IV ++S +A RGGG++GG+HY+A+K+GV+++ KA+ARE+GP  
Sbjct  162  MSQAVIPTM-RAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  182  VRANCVAPGIIETDMTLGKFGENWEQELKQGIPLQRFGSPAEVAQAILFLASDLSSYSTG  241
            +R N +APG+I+TD+T G   +++ + + +GIPL R+G++ +VA+A LFLASDLSSY TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  242  IVVDVNGGFHIH  253
            I +DVNGG  IH
Sbjct  281  ITLDVNGGMLIH  292

540) Celly_2962 in NC_015167


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 109/258 (43%), Positives = 175/258 (68%), Gaps = 21/258 (8%)

Query  1    MKLLEGKNVIITGAS--RGIGMGIAKVFADNGANVAFTYSSSEAPALELEKELTAKGVKA  58
            + LL+GK  IITGA+  RGIG + A  FA++GA V +         L+L+ E +A++  A
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI---------LDLD-ESAARDAAA  92

Query  59   K------AYKSNAASFSQAEELVANVLEDFGGIDVLINNAGITKDNLLMRMGEEDFDAVI  112
                   +  +N A  SQ  + VA ++E+FG IDVL+NNAGIT+    + +   D+D V+
Sbjct  93   TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVL  152

Query  113  EINLKSVFNMTKAVQRTFLKQRKGSIVNMSSVVGVKGNA--GQTNYAASKAGMIGFTKSV  170
            +++L++ + M++AV  T   Q  GSIV MSSV + +G +  G  +Y+A+KAG++G+ K++
Sbjct  153  DVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAM  212

Query  171  ALELGSRNIRCNAIAPGFIETEMTDKL-DEKVVQGWRDGIPLKRGGSPDDVANACLFFAS  229
            A E+G+ +IR N+IAPG+I+T++T+ L ++   ++  +GIPL R G+++DVANA LF+AS
Sbjct  213  AREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLAS  272

Query  230  DMSAYVTGQVLNVDGGML  247
            D+S+Y+TG  L+V+GGML
Sbjct  273  DLSSYLTGITLDVNGGML  290

541) CtCNB1_1271 in NC_013446


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (504),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 171/245 (70%), Gaps = 6/245 (2%)

Query  1    MRLAGKVAVVTGAG--QGMGRAIAQRFADEGATVVAVDLNEEAARQTLEGKGSKHLarss  58
            M L GK+A++TGA+  +G+GRA A  FA++GA VV +DL+E AAR++    G  HL+ ++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   nvadsaavdaLFVEIREKLGAVDVLVNNAGVGSVDQFADIPDATWERVIGVNLNGAFYCA  118
            NVAD + V      I E +G +DVLVNNAG+    +  DI  +  ++V++V+L G++  +
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  RAAVKQMQEGKGGAIVNISSTSAVSGD---GPAHYCASKAALMGLTRGMAKELASKKIRV  175
            +A +  M+   +G+IV +SS SA  G+   G +HY A+KA+++GL ++MA+E+++ +IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  176  NTLVPGPTNTPMMQGI-PQEWADAIIAGVPMGRMAEPEDIAKVAVFLASDDSGFVTGQNV  234
            N++ PG  +T +  G+  +E+ +AII G+P+GR++ ++D+A+ A+FLASD S+++TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  235  AVNGG  239
             VNGG
Sbjct  284  DVNGG  288

542) fabG in NC_017168


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

543) fabG in NC_008150


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

544) fabG in NC_017265


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

545) fabG in NC_005810


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

546) fabG in NC_003143


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

547) fabG in NC_017160


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

548) fabG in NC_004088


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

549) fabG in NC_008149


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

550) fabG in NC_009381


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

551) fabG in NC_014029


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

552) fabG in NC_006155


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

553) fabG in NC_010634


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

554) fabG in NC_010465


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

555) fabG in NC_017924


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (504),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 164/251 (66%), Gaps = 10/251 (3%)

Query  1    MKLLNGKIAVVTGGSGD--IGQSIVKTFVQHGANV-IFTFFSSIKKAKELELKFKNLVEA  57
            + LL+GKIA++TG++++  IG++   TF QHGA V I+ +  S  +     L   +L  +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL--G  100

Query  58   YKIDLSDFNSSKNLVQKVIKKYGSIDILVNNAGIIKDKFLLKISKKDWDYVIKTNLYSIF  117
               +++D +  K+ V  +I  +G ID+LVNNAGI +    L I   D D V+  +L + +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NLTKHAIYPMMK-QKKGSIINMSSVVGLTGN--IGQSNYAASKAGIIGFTKSIARELGKK  174
             L  +A+ P M+ Q  GSI+ MSSV +  G   +G ++Y+A+KAG++G+ K++ARE+G  
Sbjct  161  -LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  175  NIRCNAIAPGYIVTKMNSHFIPKIK-ENWIKSIPLKRAGTPQDVANSTLFLASDLSNYIT  233
            +IR N+IAPG I T + + ++   + +  I +IPL R G++QDVAN++LFLASDLS+Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  234  GTVLNVNGGLI  244
            G  L+VNGG++
Sbjct  280  GITLDVNGGML  290

556) LIC10700 in NC_005823


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 166/248 (67%), Gaps = 7/248 (2%)

Query  9    FEGKVALVTGAASPRGLGRAIANTIAKEGGDIVLVDLNKEQIEQAAADVAKEFGVKTLGL  68
            ++GK+A++TGAAS RG+GRA A T+A++G+ +V++DL+    E AA D A  +G   LGL
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLD----ESAARDAAATLGEGHLGL  101

Query  69   SCNVTKPEDCDSVIAGVKEKFGKLDFLVNNAGVLKDNLFIRMSEQEFDFVLDVNLKGVFL  128
            + NV+   +    +A + E FG++D LVNNAG+ +    + +   ++D VLDV+L+G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  129  MTKYASKLLLKAESGRIVNISSVSGLTGQP--GQANYSSSKAGVIALTKVAAREFAGRNV  186
            M++     +    SG IV +SSVS+  G    G ++YS++KAGV++L K  AREF+  ++
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  187  LVNAVCPGYVQTDMTASLPEEVQKKLTDPAFIPLRRPGTQQEIANAVKFFLSDQSNYITG  246
             +N++ PG ++TD+T++L ++ +++ +    IPL R G+ Q++ANA  F+ SD S+Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQD-ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  247  TYLRVDGG  254
              L V+GG
Sbjct  281  ITLDVNGG  288

557) YSA_09002 in NC_017986


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 103/256 (41%), Positives = 173/256 (68%), Gaps = 9/256 (3%)

Query  3    KTHLFDLDGKIAFVSGAS--RGIGEAIAHLLAQQGAHVIVSSRKLDGCQQVADAIIAAGG  60
            +T L  L+GKIA+++GA+  RGIG A A  +AQ+GA+V++    LD      DA  + G 
Sbjct  40   RTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILD--LDESA-ARDAAATLGE  96

Query  61   KATAVACHIGELEQIQQVFAGIREQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVN  120
               ++A ++++  Q++Q  A I E+FGR+DVLVNNA+    + + LD  PG ++K +DV+
Sbjct  97   GHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPI-KTLDIRPGDYDKVLDVS  155

Query  121  IRGYFFMSVEAGKLMRENGGGSIINVASINGV-SPGLFQGI-YSVTKAAVINMTKVFAKE  178
            +RG ++MS      MR +G+GSI+ ++S+++  + G+F G  YS +KA+V+ + K  A+E
Sbjct  156  LRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE  215

Query  179  CAPFGIRCNALLPGLTDTKFASALVKNEAILNAALQQIPLKRVADPKEMAGAVLYLASDA  238
             +P  IR N++ PGL +T ++++L+++E   +A ++ IPL R++ ++++A A L+LASD 
Sbjct  216  FGPDQIRINSIAPGLIHTDITGGLMQDERR-HAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  239  SSYTTGTTLNVDGGFL  254
            SSY TG TL+V+GG L
Sbjct  275  SSYLTGITLDVNGGML  290

558) PPUBIRD1_1881 in NC_017530


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 103/256 (41%), Positives = 173/256 (68%), Gaps = 9/256 (3%)

Query  3    KTHLFDLDGKIAFVSGAS--RGIGEAIAHLLAQQGAHVIVSSRKLDGCQQVADAIIAAGG  60
            +T L  L+GKIA+++GA+  RGIG A A  +AQ+GA+V++    LD      DA  + G 
Sbjct  40   RTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILD--LDESA-ARDAAATLGE  96

Query  61   KATAVACHIGELEQIQQVFAGIREQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVN  120
               ++A ++++  Q++Q  A I E+FGR+DVLVNNA+    + + LD  PG ++K +DV+
Sbjct  97   GHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPI-KTLDIRPGDYDKVLDVS  155

Query  121  IRGYFFMSVEAGKLMRENGGGSIINVASINGV-SPGLFQGI-YSVTKAAVINMTKVFAKE  178
            +RG ++MS      MR +G+GSI+ ++S+++  + G+F G  YS +KA+V+ + K  A+E
Sbjct  156  LRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE  215

Query  179  CAPFGIRCNALLPGLTDTKFASALVKNEAILNAALQQIPLKRVADPKEMAGAVLYLASDA  238
             +P  IR N++ PGL +T ++++L+++E   +A ++ IPL R++ ++++A A L+LASD 
Sbjct  216  FGPDQIRINSIAPGLIHTDITGGLMQDERR-HAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  239  SSYTTGTTLNVDGGFL  254
            SSY TG TL+V+GG L
Sbjct  275  SSYLTGITLDVNGGML  290

559) rabNRDR in NC_018220


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 103/256 (41%), Positives = 173/256 (68%), Gaps = 9/256 (3%)

Query  3    KTHLFDLDGKIAFVSGAS--RGIGEAIAHLLAQQGAHVIVSSRKLDGCQQVADAIIAAGG  60
            +T L  L+GKIA+++GA+  RGIG A A  +AQ+GA+V++    LD      DA  + G 
Sbjct  40   RTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILD--LDESA-ARDAAATLGE  96

Query  61   KATAVACHIGELEQIQQVFAGIREQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVN  120
               ++A ++++  Q++Q  A I E+FGR+DVLVNNA+    + + LD  PG ++K +DV+
Sbjct  97   GHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPI-KTLDIRPGDYDKVLDVS  155

Query  121  IRGYFFMSVEAGKLMRENGGGSIINVASINGV-SPGLFQGI-YSVTKAAVINMTKVFAKE  178
            +RG ++MS      MR +G+GSI+ ++S+++  + G+F G  YS +KA+V+ + K  A+E
Sbjct  156  LRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE  215

Query  179  CAPFGIRCNALLPGLTDTKFASALVKNEAILNAALQQIPLKRVADPKEMAGAVLYLASDA  238
             +P  IR N++ PGL +T ++++L+++E   +A ++ IPL R++ ++++A A L+LASD 
Sbjct  216  FGPDQIRINSIAPGLIHTDITGGLMQDERR-HAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  239  SSYTTGTTLNVDGGFL  254
            SSY TG TL+V+GG L
Sbjct  275  SSYLTGITLDVNGGML  290

560) PP_3926 in NC_002947


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 103/256 (41%), Positives = 173/256 (68%), Gaps = 9/256 (3%)

Query  3    KTHLFDLDGKIAFVSGAS--RGIGEAIAHLLAQQGAHVIVSSRKLDGCQQVADAIIAAGG  60
            +T L  L+GKIA+++GA+  RGIG A A  +AQ+GA+V++    LD      DA  + G 
Sbjct  40   RTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILD--LDESA-ARDAAATLGE  96

Query  61   KATAVACHIGELEQIQQVFAGIREQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVN  120
               ++A ++++  Q++Q  A I E+FGR+DVLVNNA+    + + LD  PG ++K +DV+
Sbjct  97   GHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPI-KTLDIRPGDYDKVLDVS  155

Query  121  IRGYFFMSVEAGKLMRENGGGSIINVASINGV-SPGLFQGI-YSVTKAAVINMTKVFAKE  178
            +RG ++MS      MR +G+GSI+ ++S+++  + G+F G  YS +KA+V+ + K  A+E
Sbjct  156  LRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE  215

Query  179  CAPFGIRCNALLPGLTDTKFASALVKNEAILNAALQQIPLKRVADPKEMAGAVLYLASDA  238
             +P  IR N++ PGL +T ++++L+++E   +A ++ IPL R++ ++++A A L+LASD 
Sbjct  216  FGPDQIRINSIAPGLIHTDITGGLMQDERR-HAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  239  SSYTTGTTLNVDGGFL  254
            SSY TG TL+V+GG L
Sbjct  275  SSYLTGITLDVNGGML  290

561) Celal_4162 in NC_014934


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 111/262 (43%), Positives = 176/262 (68%), Gaps = 28/262 (10%)

Query  1    MKLLEGKNVIITGAS--RGIGTGIAQVFADHGANVAFTYSSSEAPALALEKELTAKGVKA  58
            + LL+GK  IITGA+  RGIG + A  FA+HGA V +         L L+ E +A++  A
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI---------LDLD-ESAARDAAA  92

Query  59   K------AYKSNAASFSDSEALVAKVLEDFGGVIDVLINNAGITKDNLLMRMSEDDFDKV  112
                   +  +N A  S+    VA ++E+FG  IDVL+NNAGIT+    + +  +D+DKV
Sbjct  93   TLGEGHLGLAANVADESQVKQAVATIIEHFG-RIDVLVNNAGITQPIKTLDIRPGDYDKV  151

Query  113  IEINLKSVFNMTKAVQRTMLKQRKGSIINMSSVVGVKGNA--GQTNYAASKAGMIGFTKS  170
            ++++L++ + M++AV  TM  Q  GSI+ MSSV + +G +  G  +Y+A+KAG++G+ K+
Sbjct  152  LDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKA  211

Query  171  IALELGSRNIRCNAIAPGFIETEMTDKLDAKVVQGWR----DGIPLKRGGSPEDIANACL  226
            +A E+G+ +IR N+IAPG+I+T++T+ L   + + +R    +GIPL R G+++D+ANA L
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITGGL---MQDERRHAIIEGIPLGRLGAAQDVANAAL  268

Query  227  FFASDLSAYVTGQVLNVDGGML  248
            F+ASDLS+Y+TG  L+V+GGML
Sbjct  269  FLASDLSSYLTGITLDVNGGML  290

562) LBJ_2113 in NC_008510


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 173/248 (70%), Gaps = 10/248 (4%)

Query  4    LKGKSAVVTGSA--RGIGKSTALTLAKAGANIVIADLNEESSKATADEIAKQTGGKAIGI  61
            L+GK A++TG+A  RGIG++TA+T+A+ GA +VI DL+E +++ +A  +    G   +G+
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  62   GTNVadadsaakaiqaCVDAFGSVDILVNNAGITKDTLLMRMKKEQWDAVIAVNLTGTYN  121
            ++NVAD     +A+ + ++ FG +D+LVNNAGIT+    + ++  + D V+ V+L GT  
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  CTQAAIKFMMKNPNGGSIINLSSIAGVNGNV--GQTNYSASKAGVIGFTKAVALEMASRK  179
             +QA I   M+   +GSI+ +SS+++  G    G  +YSA+KAGV+G+ KA+A E ++ +
Sbjct  162  MSQAVIP-TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  VRCNAIAPGFIATEMTDAI-PEKIKTAMIAAIPLKRAGQPEDIANTIAFLASDISSFITG  238
            +R N+IAPG+I T++T+++  +  + A+I +IPL R G ++D+AN+  FLASD+SS++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  QVIEVNGG  246
              ++VNGG
Sbjct  281  ITLDVNGG  288

563) LILAB_31800 in NC_015711


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 176/252 (70%), Gaps = 12/252 (4%)

Query  4    FKDKVVLVTGGS--RGIGRACAVAFAKAGASTVVISYAGNEAAAQETVKLL-EAEGARAE  60
            +++K+ ++TG++  RGIGRA AV+FA+ GA  V++    +E+AA+++   L E++ + A 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAATLGEGHLGLAA  103

Query  61   AIRFdvsdsaacasavdgvvKAHGRLDVLVNNAGVAVDGLVMRVKDEDWDKQLDTNLKGA  120
             +    +D +    AV  ++   GR+DVLVNNAG++     + ++  D DK LD +L+G+
Sbjct  104  NV----ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  121  FTLIRAASRPMMKQRGGAIINITSVVGEMGNG--GQAAYSASKAGLIGLTKSVARELSSR  178
            + + +A    M  Q +G+I+ ++SV ++ G G  G + YSA+KAG++GL K++ARE+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  179  NIRVNAVSPGFIGTDMTGHL-NDELRQKMLEGIPLGRLGNPEEVAGAVVFLAGDAASYIT  237
            +IR+N+++PG+I TD+TG L +DE R+ ++EGIPLGRLG +++VA A +FLA+D +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  238  GEVLKVNGGMYM  249
            G  L VNGGM +
Sbjct  280  GITLDVNGGMLI  291

564) Caur_3262 in NC_010175


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 109/249 (44%), Positives = 172/249 (70%), Gaps = 8/249 (3%)

Query  1    MRLSGKVALITGAG--QGIGRATALLFGQHGAKVAVADINeeaaqataqaIVDAGGEAKA  58
            M L GK+A+ITGA+  +GIGRATA+ F+QHGA+V + D++E AA+ +A ++   G    +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   FFMNVGQaasveaavkavvewaGRIDVLVNNAGITRDARMIKMTEEQFDAVINVNLKGVW  118
            +  NV++ + V  AV +++E  GRIDVLVNNAGIT+  + + +   ++D V++V+L+G  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  LCTKYVAPIMIEQGGGSIINAASIVAFEGN--FGQTNYVATKAGVIGMTKTWAREFGPSG  176
            L ++ V P M  QG+GSI+  +S+ A  G   FG  +Y A+KAGV+G+ K+ AREFGP  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  IRVNAVAPGFTQTEMIAH-VPEKVLEEFKGRTPLRRLGTAEDMAYAYLFLASDEASFITG  235
            IR+N++APG+ +T++ +  + +   + +    PL RLG+A+D+A A LFLASD +S++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  EVLPVDGGL  244
              L V+GG+
Sbjct  281  ITLDVNGGM  289

565) Chy400_3520 in NC_012032


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 109/249 (44%), Positives = 172/249 (70%), Gaps = 8/249 (3%)

Query  1    MRLSGKVALITGAG--QGIGRATALLFGQHGAKVAVADINeeaaqataqaIVDAGGEAKA  58
            M L GK+A+ITGA+  +GIGRATA+ F+QHGA+V + D++E AA+ +A ++   G    +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   FFMNVGQaasveaavkavvewaGRIDVLVNNAGITRDARMIKMTEEQFDAVINVNLKGVW  118
            +  NV++ + V  AV +++E  GRIDVLVNNAGIT+  + + +   ++D V++V+L+G  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  LCTKYVAPIMIEQGGGSIINAASIVAFEGN--FGQTNYVATKAGVIGMTKTWAREFGPSG  176
            L ++ V P M  QG+GSI+  +S+ A  G   FG  +Y A+KAGV+G+ K+ AREFGP  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  IRVNAVAPGFTQTEMIAH-VPEKVLEEFKGRTPLRRLGTAEDMAYAYLFLASDEASFITG  235
            IR+N++APG+ +T++ +  + +   + +    PL RLG+A+D+A A LFLASD +S++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  EVLPVDGGL  244
              L V+GG+
Sbjct  281  ITLDVNGGM  289

566) Desde_3278 in NC_018017


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/251 (42%), Positives = 171/251 (69%), Gaps = 11/251 (4%)

Query  1    MLLDNSVAIVTGGS--RGIGRAIALELARAGAKVVV-NYAGHGEKAEETLRLIQELGGEA  57
            MLL+  +AI+TG++  RGIGRA A+ +A+ GA+VV+ +    + +   +      LG   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA-----TLGEGH  98

Query  58   CAVQADVSKVEDVERLIQTTLKTYGKVDILVNNAGITRDTLLLRMKETDWDAVLDTNLKG  117
             ++ A+V+   +V + + T +  +G++D+LVNNAGIT+    L ++  D D VLD +L+G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  118  VFLCTKAVSKSMMKQRsgviinissvvgisgnA--GQANYSAAKAGIIGFTKSIARELGS  175
             +L ++AV  +M  Q SG I+ +SSV +  G +  G ++YSAAKAG++G+ K++ARE+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RGIRVNAVAPGYISTDMTESL-GEEVKDQVMTQIPLGRMGQPEDIAKTVVFLASPAASYI  234
              IR+N++APG I TD+T +L  +E ++ ++  IPLGR+G ++D+A++ +FLAS  +SY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGQTLAVDGGM  245
            TG TL V+GGM
Sbjct  279  TGITLDVNGGM  289

567) Btus_1586 in NC_014098


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/250 (42%), Positives = 167/250 (67%), Gaps = 10/250 (4%)

Query  1    MKDKVAVITGAAN--GIGRATARLFAAHGAKVVLADVGDAEGSALESELKEGGTEALFLH  58
            +++K+A+ITGAA+  GIGRATA  FA HGA+VV+ D++++ +    + L EG    L L 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG---HLGLA  102

Query  59   VDVRKEDQVQEMVDRTLERFGRIDVLINNAGITRDGLLVKLPLVAWHEVLAVNLTGVMQC  118
             +V  E QV++ V   +E+FGRIDVL+NNAGIT+    + +     + VL V+L G +  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  TKSAAPVMIQQGGGVILNASSVVGLYGN--IGQTNYAATKAGVIGLTKTWARELGTKGIR  176
            +++  P M  QG+G I+  SSV +  G   +G  +Y+A+KAGV+GL K+ ARE+G   IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNAVAPGFIETGMTAKV--PDRILQMVEERTPLKRMGRPEEVAHVYLFLASDAASFINGA  234
            +N++APG+I+T++T+ +   +R   ++E   PL R+G +++VA+  LFLASD +S++ G 
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  235  IIPVDGGLVL  244
             + V+GG+++
Sbjct  282  TLDVNGGMLI  291

568) fabG in NC_010159


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 168/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGRIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++G+IA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDAKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG A+++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

569) fabG2 in NC_010163


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 172/251 (69%), Gaps = 23/251 (9%)

Query  4    LEGKVAVITGGA--KGLGQAIALAYAEEGAKVIAGDLGDLTYSHPNVE------GMYLNV  55
            L+GK+A+ITG+A  +G+G+A A+++A++GA+V+  DL++ +  ++         G+  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  56   TDVTGVEKFYQSVIDKYGKIDILVNNAGITKDAMTRKMTEAQWDAVIDVNLKGVFNLTRL  115
            +D + V +   ++I+ +G+ID+LVNNAGIT+   T  +  ++ D V+DV+L+G + +++ 
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  116  VGPQMQTNGYGSIINISSVV-----GVFGNIGQANYAATKAGVIGLTMTWAKEFALKGAN  170
            V P M+++G GSI+ +SSV      G+FG    ++Y+A+KAGV+GL  + A+EF+    +
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMAREFG--PDQ  220

Query  171  VRVNAIAPGYIMTDILKTVPQDLLDKFAAL---TMLNRLGQPEEIAKVALFLASDDASYV  227
            +R+N+IAPG I TDI   + QD  ++  A+     L RLG ++++A+ ALFLASD +SY+
Sbjct  221  IRINSIAPGLIHTDITGGLMQD--ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  228  TGQTINVNGGM  238
            TG T++VNGGM
Sbjct  279  TGITLDVNGGM  289

570) Glo7428_0237 in NC_019745


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 169/251 (68%), Gaps = 12/251 (4%)

Query  11   LRDRVAIVTGAS--RGIGKAIALSLASEGANVVVNYASSSTAAEKVVEEITTSGGNAIAL  68
            L++++AI+TGA+  RGIG+A A+++A +GA VV+     S+A +      +T G   ++L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARD----AAATLGEGHLGL  101

Query  69   QADVSKADQVDALLNAVMEKWNRVDVLVNNAGITRDTLLLRMKPEEWQAVIDLNLTGVFL  128
             A+V+   QV   + +++E   R+DVLVNNAGIT+    L ++P + + V+D++L G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  129  CTRAVSKVMLKQRSGRIISITSVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELAPRGI  186
             ++AV   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E++P  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  187  TANAVAPGFITTDMTSNLSNTE---DILKLIPLGRYGQPEEVAGMVRFLAADPAAGYITG  243
              N++APG+I TD+T+ L + E    I+  IPLGR G +++VA    FLA+D  ++Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSYLTG  280

Query  244  QVFNVDGGMVM  254
              ++V+GGM++
Sbjct  281  ITLDVNGGMLI  291

571) fabG in NC_009659


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 165/247 (67%), Gaps = 5/247 (2%)

Query  6    LSGQVALVTGAS--RGIGRAIAQELAKLGAKVIGTATSESGAAAISEYLGNGGKGVVLDV  63
            L G++A++TGA+  RGIGRA A  +A+ GA+V+     ES+A   +  LG+G  G+  +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  64   NDAARSVALIDEIQKEFGAVSILVNNAGITQDQLAMRMKDEEWDSVIATNLTAVGRLSRA  123
             D ++    +  I  +FG + +LVNNAGITQ   ++ ++  + D V+  +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  124  VLRGMMKAKTGRIINITSVVGSSGNA--GQMNYAAAKAGVAGMSRALAREIGSRNITVNC  181
            V+  M    +G I+ ++SV +  G +  G  +Y+AAKAGV G+++A+ARE+G+ +I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  182  IAPGFIDTDMTKTL-SEQQIAALLQQVPLGRLGVPEDIAAAVSFLASPQASYITGTTLHV  240
            IAPG+I+TD+T  L  +++  A+++ +PLGRLG ++D+A A  FLAS  +SY+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  241  NGGMYMN  247
            NGGM ++
Sbjct  286  NGGMLIH  292

572) SA2981_2409 in NC_017340


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

573) ECTR2_2329 in NC_017343


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

574) SAAV_2538 in NC_013450


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

575) SaurJH1_2549 in NC_009632


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

576) SaurJH9_2499 in NC_009487


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

577) SAHV_2456 in NC_009782


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

578) SAV2472 in NC_002758


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

579) SA2260 in NC_002745


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

580) SAI1T1_2018420 in NC_020529


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

581) SAI2T2_1018430 in NC_020564


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

582) SAI3T3_1018420 in NC_020532


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

583) SAI4T8_1018430 in NC_020533


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

584) SAI7S6_1018420 in NC_020537


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

585) SAI5S5_1018360 in NC_020566


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

586) SAI6T6_1018360 in NC_020536


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

587) SAI8T7_1018400 in NC_020568


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 15/255 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILM  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  TKMMLPLMMNQG-GSIVNTSSFSGQ-AEDLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M  QG GSIV  SS S+Q + +++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  SNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238
             N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVM  253
            S++TG T+ ++GG++
Sbjct  276  SYLTGITLDVNGGML  290

588) AARI_31570 in NC_014550


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 110/254 (44%), Positives = 174/254 (69%), Gaps = 12/254 (4%)

Query  6    RTAVLTGATSPQGIGIETARHLAREGWGIAILDLDHSASERVAAEIAE-EFGVPAFGHEI  64
            + A++TGA+S +GIG  TA  +A++G  + ILDLD+SA+   AA ++E ++G++A     
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-----  103

Query  65   DVADESSvataqaavaarvaaGELPPAGAVVNIAGITSPVDFLDTTLDIWNKIMNVNATG  124
            +VADES V  A A++       ++   + +VN AGIT P+  LD   +  +K+++V+  G
Sbjct  104  NVADESQVKQAVATII-----EHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  125  TYLVTKAFLPEMIESGWGRVINMSSVSAQRGGGVFGKVPYSSAKAAILGFTKALAREISA  184
            T L+++A +P M   G G ++ MSSVSAQRGGG+FG   YS+AKA++LG+ KA+ARE+++
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  185  SGVTVNAIAPGAVDTNIRVG-STDEQEAAIAAGIPIGRTATTGEVASVIGFLASEGASYL  243
              + +N+IAPG ++T+I  G   DE+  AI  GIP+GR +++ +VA+   FLAS+ +SYL
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  244  TGTTIDINGGSHMH  257
            TG T+D+NGG  +H
Sbjct  279  TGITLDVNGGMLIH  292

589) Cal7507_1099 in NC_019682


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 109/259 (43%), Positives = 173/259 (67%), Gaps = 20/259 (7%)

Query  11   LQGKVAIITGAS--RGIGRAIAQELARYGANVVINYASSSAAADSLVTEITAAKNQAFAE  68
            LQGK+AIITGA+  RGIGRA A  +A+ GA VVI           L  + +AA++ A + 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVI-----------LDLDESAARDAAATL  94

Query  69   GVGEAIALQADVSQVDQVDALFNAVIDKFKRIDILVNNAGITRDTLLLRMKPEDWQAVID  128
            G G+ ++L A+V++  QV     ++I+ F RID+LVNNAGIT+    L ++P D + V+D
Sbjct  95   GEGH-LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLD  153

Query  129  LNLTGVFLCTRAASKVMLKQRSGRIINIASVAGQMGNP--GQANYSAAKAGVIGFTKTVA  186
            ++L G +L ++A    M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  187  KELASRGITVNAVAPGFIATDMTSNLSNTE---EILKYIPLGRYGQPEEVAGMVRFLAAD  243
            +E+++  I +N++APG+I TD+T+ L + E    I+  IPLGR G +++VA    FLA+D
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD  273

Query  244  PAAAYITGQVFNVDGGMVM  262
              ++Y+TG  ++V+GGM++
Sbjct  274  -LSSYLTGITLDVNGGMLI  291

590) fabG2 in NC_005085


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  137 bits (502),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MRLKGKVSIITGSAS--GIGKATAEKFVKEGAIVAVCDLNPDAVKTVVDELKALGGEAYG  58
            M L+GK++IITG+AS  GIG+ATA  F ++GA V + DL+  A +   D   +LG    G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR---DAAATLGEGHLG  100

Query  59   YKVDVTDKGQIAEMVADLKNRCGRIDVLVNNAGIVQDAQLIKMSEDQFDKVIDINLKGVY  118
               +V+D +Q+ + VA + ++ GRIDVLVNNAGI Q  + + +  +++DKV+D++L+G  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCARAVVDTMVEQGGGVILNASSVVGVYGN--FGQTNYAAAKFGVIGFVKTWAKELGKKG  176
              ++AV+ TM  QG+G I+  SSV +  G   FG  +Y+AAK GV+G+ K+ A+E+G   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  IRANAVCPGFVATPILKA-MPEKVLQAMEDKVPMRRMADPAEIANVYAFLASDEASYING  235
            IR N++ PG++ T I  + M +   +A+ + +P+ R++ + ++AN   FLASD +SY+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  AAIEVTGGL  244
             +++V GG+
Sbjct  281  ITLDVNGGM  289

591) fabG in NC_010296


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 107/251 (43%), Positives = 170/251 (68%), Gaps = 13/251 (5%)

Query  11   LQDKVAIVTGAS--RGIGKAIALELASQGATVVVNYAKSSSAADAVVEEITAAGGKAIAL  68
            LQ+K+AI+TGA+  RGIG+A A+ +A +GA VV+     S+A DA     ++ G   ++L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA----ATLGEGHLGL  101

Query  69   QADVAKSEEVDNLVDSTKEKFGHIDVLVNNAGITRDTLMLRMKLEDWQAVIDLNLTGVFL  128
             A+VA   +V + V +  E FG+IDVLVNNAGIT+    L ++  D + V+D++L G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  129  CTRAVSKLMLKQKSGRIINITSVSGLMGNP--GQSNYSAAKAGVIGLTKTLAKEFASRGI  186
             ++AV   M  Q SG I+ ++SVS+  G    G ++YSAAKAGV+GL K++A+EF++  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  187  TVNAVAPGFIETDMTHDLKADE----ILKYIPLSRYGKPEEVAGMVRFLAADPAAIYISG  242
             +N++APG+I+TD+T +L  DE    I+  IPL+R G +++VA    FLA+D ++ Y++G
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS-YLTG  280

Query  243  QVFNVDGGMVM  253
              ++V+GGM++
Sbjct  281  ITLDVNGGMLI  291

592) fabG6 in NC_019670


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 105/249 (43%), Positives = 167/249 (68%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAIVVGTATSASGAERIAATLKENGIQGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA VV      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LELNVTSDESVAAVLASIQEQFGAPAILVNNAGITRDNLMMRMKDDEWHDVVDTNLNSLF  118
            L  NV+ +  V   +A+I E+FG   +LVNNAGIT+    + ++ ++ + V+D +L + +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRA  176
             +S++V+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQREALQTQIPLGRLGQAQEIASVVAFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A+   IPLGRLG AQ++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

593) fabG in NC_010681


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 170/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQIAIVTGAS--RGIGRAIAMELARQGATVIGTATSESGAAAISEAFNAAGVNGRGAV  62
            L+ +IAI+TGA+  RGIGRA A+ +A++GA V+     ES+A   + ++  + +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAAAAEALIDGTVKEFGALHVLVNNAGITQDQLAMRMKDDDWDAVVDTNLKSVFRL  122
             NV D +     +   + +FG ++VLVNNAGITQ   ++ ++ +D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKAKG-GRIINITSVVGSAGNP--GQINYAAAKAGVAGMTRALAREIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

594) Fluta_3559 in NC_015321


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 104/254 (41%), Positives = 171/254 (68%), Gaps = 15/254 (5%)

Query  3    LLDNKIVLITGAS--RGIGKSIAEECVKQGAKVAFTYLSSEEKARALETELTANGGEAVG  60
            LL+ KI +ITGA+  RGIG++ A    ++GA+V +  L  E  AR   + L   G   +G
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLD-ESAARDAAATL---GEGHLG  100

Query  61   FKSDAANFDQAQKLVDDVVAKFGTIDVLVNNAGITRDTLLMRMTEEQWDEVMNTNLKSAF  120
            + ++ A+  Q ++ V  ++  FG IDVLVNNAGIT+    + +   + D V++ +L++++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NLTKAVQRPMLKARSGSIINMSSVVGVSGNA--GQSNYAASKAGLIGFTKSIAQELGSRS  178
             +++AV   M    SGSI+ MSSV +  G +  G ++Y+A+KAG++G+ K++A+E+G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRCNAIAPGFIETEMTAALDQKVVEEWRNS----IPLKRGGQPIDVANAVVFLASDMSTY  234
            IR N+IAPG+I+T++T++L Q   +E+R++    IPL R G + DVANA +FLASD+S+Y
Sbjct  221  IRINSIAPGLIHTDITGGLMQ---DERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VTGQTIHVCGGMLM  248
            +TG T++V GGML+
Sbjct  278  LTGITLDVNGGMLI  291

595) Nos7107_0953 in NC_019676


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 167/251 (67%), Gaps = 12/251 (4%)

Query  11   LKGKVAIVTGGS--RGIGKAIALELAKYGASVAVNYASSSTAADEVVTDITAVGGQAIAL  68
            L+GK+AI+TG++  RGIG+A A+ +A+ GA V +     S+A D   T    +G   ++L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT----LGEGHLGL  101

Query  69   QADVSQADQVEGLINATTEKFGRVDILVNNAGITRDTLLLRMKPEEWQAVIDLNLTGVFL  128
             A+V++  QV   + +  E FGR+D+LVNNAGIT+    L ++P + + V+D++L G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  129  CTRAVSKIMLKQRFGRIINIASVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELATRGI  186
             ++AV   M  Q  G I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E++   I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  187  TVNAVAPGFITTDMTSNLSNTE---EILKFIPLGRYGQPEEVAGMVRFLAADAAANYITG  243
             +N++APG+I TD+T+ L + E    I+  IPLGR G +++VA    FLA+D ++ Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS-YLTG  280

Query  244  QVFNVDGGMVM  254
              ++V+GGM++
Sbjct  281  ITLDVNGGMLI  291

596) Tlie_1315 in NC_016148


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 105/258 (41%), Positives = 158/258 (62%), Gaps = 17/258 (6%)

Query  2    REELFSLSGKVAVVTGAAS--GIGRGCAEFLHEMGAAVAIVDVSRDKGEEVALKLKDRAK  59
            R  L  L GK+A++TGAAS  GIGR+ A  + + GA V I+D+    + + A  L +   
Sbjct  40   RTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL  99

Query  60   YFFCDVTAEQSCADMVQNVIDHFGGIDILVNCAGVIRRKSVVELEEKDWDAVLDVSLKGT  119
             +  +V+ E    + V  +I+HFG ID+LVN AG+ +    +++   D D VLDVSL+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  FLVSKYVIPQMEKRGGGSIVNIGSGWGIKGGP--KAAAYCAAKGGVVNLTRAMAIDHGPQ  177
            +L+S+ VIP M  +G+GSIV ++S  + +GG    ++ Y AAK+GV+ L +AMA + GP+
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  NIRVNCVSPG----DTDTPLLRDEARQLGIDENKWLEESAQRPLARLGEPLDIAMAVYFL  233
            +IR+N ++PG    D    L++DE R+  I+           PL+RLG + D+A A  FL
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGI---------PLGRLGAAQDVANAALFL  270

Query  234  ASDLSRWITGANLVVDGG  251
            ASDLS  +TG  L V+GG
Sbjct  271  ASDLSSYLTGITLDVNGG  288

597) fabG in NC_015578


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 173/249 (70%), Gaps = 6/249 (2%)

Query  1    MRLEGKKALVTGAS--RGIGRAITDRFLAEGAEVWGLGTREPGDLQDRIAASGGKLHWIS  58
            M L+GK A++TGA+  RGIGRA +  F  +GA V  L+  E++  +   + + G L  ++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLG-LA  102

Query  59   ADLGKVQEVEAIVEGELKKAGGFDILVNNAGITKDNLSFRMSLEDFQKVLDVNLTATFII  118
            A+++   +V   V   +   G +D+LVNNAGIT+   ++ +   D++KVLDV+L +T+++
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  ARTVGRDMIRRRSGSIINMASVVGIHGNG--GQANYAASKAGVIGVTKSLARETASRGVR  176
            +++V   M  + SGSI+ M+SV + +G G  G ++Y+A+KAGV+G+ K++ARE ++  +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNAIAPGFIASDMTDAV-SEEAKGKMIDQIPLKRIGQPDDVAEAVLFLASDASAYITGQV  235
            +N+IAPG+I +D+T+++  +E +  +I+ IPL R+G ++DVA+A LFLASD S+Y+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  IAVDGGMFI  244
            + V+GGM+I
Sbjct  283  LDVNGGMLI  291

598) Rxyl_2740 in NC_008148


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (501),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 100/243 (42%), Positives = 165/243 (68%), Gaps = 8/243 (3%)

Query  2    RVVLVTGAGS--GIGRAIAERFAKDEERVVVNDIREEAAEQVASHIRRLGGESIAAPGDV  59
            ++ ++TGA+S  GIGRA A  FA++  RVV+ D+ E AA + A+    LG   ++ +++V
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLGLAANV  105

Query  60   SDPEAVKNIVNVCGEAYGHPDVLVNNAGFVQQKRFVDLSVEDFDRMIAVHLRGTFLCIRE  119
            +D   VK+ V    E +G+ DVLVNNAG+ Q  + +D+   D+D+++ V LRGT+L  + 
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  120  VLPEMLTRGYGIVVNIASQLGQIGG--IELCHYSAAKAGIIGLTKALAREVSAQGVRVNA  177
            V+P M ++G G +V ++S  +Q GG  +   HYSAAKAG++GL KA+ARE +++ +R+N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  178  VAPGPINTELVRGL-SEEWRRTKAAELPLGRFGEPWEVAETVAFLASDKAALYVGQTLGP  236
            +APG I+T++  GL  +E+R++    +PLGR+G + +VA++  FLASD ++   G TL+ 
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  237  NSG  239
            N+G
Sbjct  286  NGG  288

599) fabG in NC_019951


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (501),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 154/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATQVAAKRLGGDDVALAVRCDVTHADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A++ AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

600) fabG in NC_009708


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (501),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 167/246 (68%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAELLVERGACVIGTATSEKGAEAISAYLGENGKGLML  58
            M ++GKIA++TGA+  RGIGRA A  + ++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDPTSIDTVLATIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSVFRLS  118
            NV D + +   +ATI  +FG +D+LVNNAGIT+    + ++ ++ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMGNA--GQVNYAAAKAGVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G  +Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRTL-TDDQRAGILAQVPANRLGDVKEIASAVAFLASDEASYISGETL  235
            N +APG+I+TD+T  L  D++R +I+  +P  RLG  +++A+A  FLASD +SY++G TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

601) fabG in NC_019965


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGTIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

602) Cagg_0630 in NC_011831


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (500),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 168/249 (68%), Gaps = 8/249 (3%)

Query  1    MRLSGKVAIVTGGG--QGIGRATALLFGKEGAKVAVADineeaatatantiieaGGQAKA  58
            M L GK+AI+TG++  +GIGRATA+ F+++GA+V + D++E AA  +A T+   G    +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   FVVNVGQAASVEAMVKGVVEWAGTVDILVNNAGITRDARMIKMTEEQFDAVINVNLKGVW  118
            +  NV++ + V   V  ++E  G +D+LVNNAGIT+  + + +   ++D V++V+L+G  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  LCTKYVAPIMIEKGSGSIINAASIVAFNGN--FGQTNYVASKAGVIGMTKTWAREFGPSG  176
            L ++ V P M  +GSGSI+  +S+ A  G   FG  +Y A+KAGV+G+ K+ AREFGP  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  IRVNAVAPGFTQTDMI-AHVPEKVLDEFKGRTPLRRLATPEDVAYAYLFLASDESGFITG  235
            IR+N++APG+ +TD+  + + +   + +    PL RL++++DVA A LFLASD S+++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  EVLPVDGGL  244
              L V+GG+
Sbjct  281  ITLDVNGGM  289

603) Fnod_0313 in NC_009718


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 105/253 (42%), Positives = 167/253 (67%), Gaps = 19/253 (7%)

Query  1    MRLAGKVCIITGAGS--GIGRTAAELFAKEGAIVIACDVGEATYDNPNI-----HF-YKL  52
            M L GK+ IITGA+S  GIGR++A  FA++GA V+  D++E++  ++       H+    
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  53   DVTDRARIAEVVKDVVEKFGKIDVLINNAGITRDALIQNMTEEDWDKVINVNLKGVFNMT  112
            +V+D +++ + V  ++E FG+IDVL+NNAGIT+     ++   D DKV++V+L+G + M+
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  113  QAVVPYMLEAGKGSIINTSSVV-----GVYGNIGQTNYSATKAGVIGMTKTWAKEFARKG  167
            QAV+P M   G GSI+  SSV      G++G     +YSA+KAGV+G+ K+ A+EF+   
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG---PHYSAAKAGVLGLGKAMAREFGP--  218

Query  168  AQIRVNAVAPGFIKTPMTEKV-PEKILTAMAEKAALKRLGEPIEVAYVYLFLASDESSFV  226
             QIR+N++APG+I T +T  +  +    A+ E  +L RLG + +VA   LFLASD SS++
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  227  TGQVIGVDGGLII  239
            TG  ++V+GG++I
Sbjct  279  TGITLDVNGGMLI  291

604) fabG in NC_003272


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 172/251 (69%), Gaps = 13/251 (5%)

Query  8    LRGQVAVVTGAS--RGIGRAIALELANYGATVVVNYASSSTAADEVVAEITGAGGEAVAL  65
            L+G++A++TGA+  RGIGRA A+ +A+ GA VV+      +AA +  A +   G   ++L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATL---GEGHLGL  101

Query  66   KADVSQVEQVDNLINGAIDKFKRIDILVNNAGITRDTLLLRMKPEDWQAVIDLNLTGVFL  125
             A+V++  QV + +   I+ F RID+LVNNAGIT+    L ++P D + V+D++L G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  126  CTRAVSKLMLKQRSGRIINITSVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELASRGI  183
             ++AV   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E+++  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  184  TVNAVAPGFIATDMTSNL----KSEGILQYIPLGRYGQPEEIAGMVRFLAADPAAAYITG  239
             +N++APG+I TD+T+ L    + ++I++ IPLGR G ++++A    FLA+D  ++Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSYLTG  280

Query  240  QVFNVDGGMVM  250
              ++V+GGM++
Sbjct  281  ITLDVNGGMLI  291

605) fabG2 in NC_015758


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

606) fabG in NC_002945


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

607) K60_014490 in NC_020245


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

608) fabG in NC_016804


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

609) fabG in NC_008769


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

610) fabG in NC_012207


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

611) fabG2 in NC_015848


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

612) fabG in NC_019950


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

613) fabG in NC_021054


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

614) fabG in NC_021193


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

615) CCDC5079_1250 in NC_017523


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

616) fabG2 in NC_021251


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

617) CCDC5180_1241 in NC_017522


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

618) fabG in NC_002755


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

619) fabG in NC_017524


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

620) fabG in NC_021194


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

621) M943_07080 in NC_021740


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

622) fabG in NC_020559


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

623) fabG in NC_009565


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

624) fabG in NC_009525


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

625) RVBD_1350 in NC_018143


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

626) fabG2 in NC_000962


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

627) fabG in NC_021192


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

628) TBHG_01337 in NC_022350


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

629) fabG in NC_012943


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

630) TBSG_02642 in NC_016768


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

631) TBXG_002608 in NC_018078


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

632) MT7199_1382 in NC_020089


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

633) fabG2 in NC_016934


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  136 bits (499),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A+  AA  LG ++++LA   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

634) CTN_0912 in NC_011978


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (497),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 107/251 (43%), Positives = 170/251 (68%), Gaps = 8/251 (3%)

Query  15   MRLEGKVCMITGAAS--GIGKAASLLFVQEGAIVAACDVSETSLNTLVEEAKDLPGKVEP  72
            M L+GK+ +ITGAAS  GIG+A+++ F Q+GA V   D+ E++     + A  L      
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR---DAAATLGEGHLG  100

Query  73   YVLDVTNREQVKEVVESIVQKYGRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVF  132
               +V++  QVK+ V +I++ +GRIDVLVNNAGIT+    + ++  D D V++V+L+G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  133  NVTQAVVPHMIKQRsgsii--nvssvvgvygnpgQTNYAASKAGVIGMTKTWAKELAGRN  190
             ++QAV+P M  Q SGSI+  +  S     G  G  +Y+A+KAGV+G+ K+ A+E++  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  191  IRVNAVAPGFIETPMTEKL-PDKAREAALSRIPLGRFGKPEEVAQVYLFLASDESSYITG  249
            IR+N++APG+I+T +T  L  D  R+A +  IPLGR+G +++VA+  LFLASD SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  250  QVIGVDGGLVI  260
              ++V+GG++I
Sbjct  281  ITLDVNGGMLI  291

635) fabG-2 in NC_011146


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (496),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 106/253 (42%), Positives = 167/253 (67%), Gaps = 16/253 (6%)

Query  1    MSLNGQVAIVTGAS--RGIGRAIALKLALQGAAVVVTATTKEGAARTADEIAAAGGRALA  58
            M L+G++AI+TGA+  RGIGRA A+ +A +GA VV+     E+AAR A    + G  +LA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL-DESAARDAAATLGEGHLGLA  102

Query  59   vkvdvsvvseveALFKEAVAA----FGKVDILVNNAGITKDGLLLRMKEEDWDAVLDVNL  114
             +V            K+AVA+    FG++D+LVNNAGIT+    L ++  D D VLDV+L
Sbjct  103  ANVADESQV------KQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  115  KGSFNCTREAAKIMSKARYGRIVNVSSVVGEMGNP--GQANYCASKAGMIGLTKSVAREL  172
            +G++  ++     M     G IV +SSV ++ G    G ++Y A+KAG++GL K++ARE+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  173  ARRNVTVNAVTPGFIETDMTSEL-SEKTRESLQEQIPMGRLGSADDISGAVLFLVSDAAA  231
            +  ++ +N+++PG+I+TD+T+ L  +  R+++ E IP+GRLG+A+D++ A LFL SD ++
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  232  YITGHVLSVNGGM  244
            Y+TG  L VNGGM
Sbjct  277  YLTGITLDVNGGM  289

636) BC1002_2141 in NC_014117


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (497),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 171/251 (69%), Gaps = 10/251 (3%)

Query  5    LDKQIAIVTGAS--RGIGRAIAMELARQGATVIGTATSESGATAITEAFKAAGVNGRGAV  62
            L+ +IAI+TGA+  RGIGRA A+ +A++GA V+     ES+A   + ++  + +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LDVNDAAAAEALIDGTVKEFGALNVLVNNAGITQDQLAMRMKDDDWDAVVDTNLKSVFRL  122
             +V D +     +   + +FG ++VLVNNAGITQ   ++ ++ +D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKAKG-GRIINITSVVGSAGNP--GQINYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKAL-PEEQQTVLKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T +L  +E++  +   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMYMQ  249
            TL+VNGGM ++
Sbjct  282  TLDVNGGMLIH  292

637) Ftrac_3635 in NC_014759


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (496),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 160/247 (65%), Gaps = 7/247 (2%)

Query  4    LKDKVAVITGGAN--GIGKATAQKFITEGAQVAIWDIVKEKGEETAKELGNNTKFYQVDT  61
            L++K+A+ITG+A+  GIG+ATA  F  +GA+V I D+    + ++A  LG+       + 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   TSFDQVEKAAQQTHQDFGKIDILINNAGITQDATLAKMSIEQWQKVLDVNLNGVFYCTKA  121
            +   QV +A     ++FG+ID+L+NNAGITQ      +   + +KVLDV+L G +  ++A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  122  ISPFMVEQAYGRIVNASSVVGIYGN--FGQTNYVATKAGVIGMTKTWARELGRKGITVNA  179
            + P M  Q+ G IV  SSV +  G   FG  +Y A+KAGV+G+ K+ ARE+G   I +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  180  IAPGFIATEMVKSI--PEKVINMLEGKTPLGRLGQPEEIANAYAFLASDEASFISGATLS  237
            IAPG+I T++  ++   E+   ++EG  PLGRLG ++++ANA  FLASD +S+++G TL 
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  238  VDGAVTI  244
            V+G++ I
Sbjct  285  VNGGMLI  291

638) Ssol_2412 in NC_017274


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (496),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 177/255 (70%), Gaps = 13/255 (5%)

Query  1    MSLKGMVSIVTGSA--MGIUREIALALAEKGSNVVLFDIAEKV-KDTLLEVKDRGVDGLA  57
            M L+G ++I+TG+A   GI R  A+++A+ G+ VV++D+ E   +D+   +   G + L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  58   LIGDVTKRADVERAAREVINTFGKIDILVNNAGIY-PMKPFLEMTEEEWDKVLNVNLKGT  116
            L ++V+  ++V +A   +I+ FG+ID+LVNNAGI  P+K  L++   + DKVL+V+L+GT
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKT-LDIRPGDYDKVLDVSLRGT  159

Query  117  FLFSRSVAPYMVKRKYGRIINISSNAAVVG---FPGLAHYCASKTGIVGLTRAVALELAP  173
            +L S++V P M  +  G I+ +SS +A  G   F G +HY A+K+G++GL +A+A E++P
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGG-PHYSAAKAGVLGLGKAMAREFGP  218

Query  174  HGITVNAIAPGPIETGNVSSGASQLPNAQAFLNALPVGRLGKPRDVANVVIFLASPESSF  233
            + I +N+IAPG I+T ++++G  Q    +A+++++P+GRLG ++DVAN  +FLAS  SS+
Sbjct  219  DQIRINSIAPGLIHT-DITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  234  ITGQLIVVDGGYTVH  248
            +TG  + V+GG  +H
Sbjct  278  LTGITLDVNGGMLIH  292

639) Pnec_0235 in NC_010531


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 105/244 (44%), Positives = 171/244 (71%), Gaps = 6/244 (2%)

Query  5    LKDKVAIITGAA--KGIGFATAQRFAQEGAKVIITDINQDAVNGAVAQIPNAE-GCAMNV  61
            L++K+AIITGAA  +GIG ATA  FAQ+GA+V+I D+++ A  +A A + +++ G A NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   TDRASIQAVVDQVIQKHGRIDILINNAGITQDARLIKRTEAQFDTVINVNLKGVFNCTQL  121
            +D + ++  V  +I+  GRID+L+NNAGITQ  + +    +++D V++V+L+G +  +Q 
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  122  IVPHMLEagsgavvnassvvgLYGN--FGQTNYSATKFGVIGFIKTWARELGPKGIRVNA  179
            ++P M   GSG++V  SSV +  G   FG  +YSA+K GV+G+ K+ ARE+GP  IR+N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  180  VCPGFIATEMVKAL-PENILQDIEKRSWLGRLGTPNEMANVYLFLASDEASYVNGVTLEA  238
            + PG+I T++  +L  ++  + I     LGRLG+++++AN  LFLASD +SY+ G+TL+ 
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  239  SGGI  242
            +GG+
Sbjct  286  NGGM  289

640) BYI23_C002750 in NC_016590


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 106/249 (43%), Positives = 170/249 (69%), Gaps = 8/249 (3%)

Query  1    MKLQGKVALitgagqgigaataS--KFAQEGAAVVVCDVNEASLKDVTEACRKAGADTAA  58
            M LQGK+A+ITGA+   G + A+   FAQ+GA VV+ D++E++ +D + +    G +  +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT---LGEGHLG  100

Query  59   YCIDMTDKLGVSELVASVTKRFGRIDVLVNNAGITRDARLQKMTLDQFDAVIDVNLRAVF  118
               +++D   V + VA++  +FGRIDVLVNNAGIT+  +   +  +++D V+DV+LR+ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  HASQAVAEGMIARGSGVILNVSSVVGIYGN--FGQTNYAASKFGVIGFTKTWSRELGPKG  176
              SQAV   M A+GSG I+ +SSV +  G   FG  +Y+A+K GV+G+ K+ +RE+GP  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  IRVNAVAPGFIDTSILSTI-PEDVLSKMREQVPLGRLGAPEEVANVYAFLASDEASYING  235
            IR+N++APG+I+T I + +  ++    + E +PLGRLGA+++VAN   FLASD +SY+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  AVIEVSGGM  244
              ++V+GGM
Sbjct  281  ITLDVNGGM  289

641) fabG in NC_013791


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 105/253 (42%), Positives = 173/253 (69%), Gaps = 11/253 (4%)

Query  1    MLQGKVAVVTGAS--RGIGRAIALELAKNGANIVV-NYAGSVAKAEEVVASCKELGVDAL  57
            +LQGK+A++TGA+  RGIGRA A+ +A++GA +V+ +   S A+          LG + L
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT-----LGEGHL  99

Query  58   AVQADVANSESVQAMIKESIEAFGRVDILVNNAGITRDNLLMRMKEDDWDAVIDTNLKGV  117
            ++ A+VA+   V+  +   IE FGR+D+LVNNAGIT+    + ++ +D D V+D +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FNCSKAVTRQMMKQRYGRIINVASVVGILGNA--GQANYVAAKAGVIGLTKTMARELANR  175
            +  S+AV   M  Q  G I+ ++SV +  G +  G ++Y AAKAGV+GL K+MARE++  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NILVNAVAPGFIttdmtdeltedmKAQ-MLGQIPLGALGKPEHIASVVRFLASDDAAYMT  234
            +I +N++APG+I TD+T+ L +D + + ++  IPLG LG ++++A+   FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTLNVDGGMVMQ  247
            G TL+V+GGM+++
Sbjct  280  GITLDVNGGMLIH  292

642) fabG in NC_015576


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 171/248 (69%), Gaps = 7/248 (2%)

Query  1    MSLLTGQTAVVTGGA--QGLGYAIAERFIAEGARVVLGDVNPAATEEAAAQLGGSEVARA  58
            + LL G+ A++TG+A  +G+G A A  F  +GARVV+ D++ +A+ +AAA LG ++++ A
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   VRCDVTSSaevdalvaaaveMFGGLDIMVNNAGITRDATMRKMTEEQFDQVISVHLKGTW  118
               +V+  ++V   VA+ +E FG +D++VNNAGIT+      +   ++D+V+ V L+GT 
Sbjct  103  A--NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NGLRAAAAIMREQKRGAIVNMSSISGK--VGMVGQTNYSAAKAGIVGMTKAASKELAYLG  176
               +A  + MR Q  G+IV MSS+S++   G+ G  +YSAAKAG++G+ KA ++E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAIQPGLIRSAMTEA-MPQRIWDSKVAEVPLGRAGEPDEVANVALFLASGMSSYMTG  235
            +R+N+I PGLI++ +T + M +  +++ +  +PLGR G +++VAN ALFLAS++SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  TVLEVTGG  243
              L+V GG
Sbjct  281  ITLDVNGG  288

643) fabG in NC_010682


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 103/248 (42%), Positives = 175/248 (71%), Gaps = 10/248 (4%)

Query  5    LNNQVALVTGAS--RGIGRAIALELARQGATVVGTATSEAGAQAITAYFAEAGVKGAGVV  62
            L+ ++A++TGA+  RGIGRA A+ +A++GA VV     E++A+  +A ++E+ +   G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAARCEAVIDETIKTYGGLNILVNNAGITQDNLAMRMKDDEWVSVIDTNLSAVFRL  122
             NV D ++    +   I  +G +++LVNNAGITQ   ++ ++ ++   V+D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQANYAAAKAGVEGMARALAREIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G ++Y+AAKAGV G+++A+ARE+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCIAPGFIDTDMTK-VLSEEQHTALKAQIPLGRLGAPEDIANAVAFLASPAAGYITGS  238
             +N IAPG+I+TD+T  ++ +E++ A+   IPLGRLGA++D+ANA  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

644) C380_11995 in NC_018708


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 165/250 (66%), Gaps = 14/250 (5%)

Query  17   LRDRVCIVTGGA--QGIGEACVRRFAAEGAKPVIVDVDDARGRALAQELGA--LYVSCDV  72
            L++++ I+TG+A  +GIG A    FA +GA+ VI+D+D++ +R  A  LG   L ++ +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  73   GDKSQVDALVSQTLAAHGRIDVLVNNAGIFRSADFLDVTEADFDAVLRVNLKGSFLVGQA  132
            +D SQV   V+  +   GRIDVLVNNAGI ++   LD+  +D+D VL V+L+G++L++QA
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  133  VARAMVASGGGSIVNMSSVN-----GVLTIPNISSYNVSKGGVNQLTRVMALALADKNIR  187
            V  +M A G+GSIV MSSV+     G++  P+   Y+ +K+GV  L + MA  ++  +IR
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPH---YSAAKAGVLGLGKAMAREFGPDQIR  222

Query  188  VNAVAPGTIATELAAKAVLTSDEAKNKIMSRTPMKRLGEPSEIADVVAWLASDAASYVTG  247
            +N++APG I T+++  + L  DE ++ I+   P+ RLG + ++A+    LASD +SY+TG
Sbjct  223  INSIAPGLIHTDIT--GGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  248  EIVTVDGGRM  257
              + V+GG +
Sbjct  281  ITLDVNGGML  290

645) fabG in NC_014103


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 173/252 (69%), Gaps = 11/252 (4%)

Query  1    MLQGKVAVVTGAS--RGIGRAVAIELGKLGAKVVV-NYSGSEAKALEVVDEIKGLGTDAI  57
            +LQGK+A++TGA+  RGIGRA A+ +++ GA+VV+ +   S A+     D    LG + +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQANVAESDAVQAMIKEAISTFGSVDILVNNAGITRDNLLMRMKEDEWDDVINTNLKGV  117
            ++ ANVA+   V+  +   I  FG +D+LVNNAGIT+    + ++ ++ D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAVTRQMMKQRAGRiinissivgvsgnA--GQANYVAAKSGVIGLTKTTAKELASR  175
            +L ++AV   M  Q +G I+ +SS+ +  G +  G ++Y AAK+GV+GL K+ A+E+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFIATDMTDKL-NEEVQSEMLKQIPLASFGQPEDVANAVAFLASDASRYIT  234
            +I +N++APG+I TD+T+ L ++E +  ++  IPL+ +G ++DVANA  FLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTIHVDGGMVM  246
            G T++V+GGM++
Sbjct  280  GITLDVNGGMLI  291

646) fabG in NC_014019


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 173/252 (69%), Gaps = 11/252 (4%)

Query  1    MLQGKVAVVTGAS--RGIGRAVAIELGKLGAKVVV-NYSGSEAKALEVVDEIKGLGTDAI  57
            +LQGK+A++TGA+  RGIGRA A+ +++ GA+VV+ +   S A+     D    LG + +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQANVAESDSVQAMIKEAISTFGSVDILVNNAGITRDNLLMRMKEDEWDDVINTNLKGV  117
            ++ ANVA+   V+  +   I  FG +D+LVNNAGIT+    + ++ ++ D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAVTRQMMKQRAGRiinissivgvsgnA--GQANYVAAKSGVIGLTKTTAKELASR  175
            +L ++AV   M  Q +G I+ +SS+ +  G +  G ++Y AAK+GV+GL K+ A+E+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFIATDMTDKL-NEEVQAEMLKQIPLASFGQPEDVANAVAFLASDASRYIT  234
            +I +N++APG+I TD+T+ L ++E +  ++  IPL+ +G ++DVANA  FLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTIHVDGGMVM  246
            G T++V+GGM++
Sbjct  280  GITLDVNGGMLI  291

647) BMWSH_1005 in NC_017138


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 173/252 (69%), Gaps = 11/252 (4%)

Query  1    MLQGKVAVVTGAS--RGIGRAVAIELGKLGAKVVV-NYSGSEAKALEVVDEIKGLGTDAI  57
            +LQGK+A++TGA+  RGIGRA A+ +++ GA+VV+ +   S A+     D    LG + +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHL  99

Query  58   AVQANVAESDSVQAMIKEAISTFGSVDILVNNAGITRDNLLMRMKEDEWDDVINTNLKGV  117
            ++ ANVA+   V+  +   I  FG +D+LVNNAGIT+    + ++ ++ D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FLCTKAVTRQMMKQRAGRiinissivgvsgnA--GQANYVAAKSGVIGLTKTTAKELASR  175
            +L ++AV   M  Q +G I+ +SS+ +  G +  G ++Y AAK+GV+GL K+ A+E+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  NITVNAVAPGFIATDMTDKL-NEEVQAEMLKQIPLASFGQPEDVANAVAFLASDASRYIT  234
            +I +N++APG+I TD+T+ L ++E +  ++  IPL+ +G ++DVANA  FLASD S Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  235  GQTIHVDGGMVM  246
            G T++V+GGM++
Sbjct  280  GITLDVNGGMLI  291

648) fabG in NC_005363


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 171/246 (70%), Gaps = 7/246 (2%)

Query  13   LQGKKIVVTGGS--RGIGAAIVKLLADEGAQVAFTYSSREEAAQQVAHSLTGEGHFYIKM  70
            LQGK  ++TG++  RGIG A    +A++GA+V +     E AA++ A +L GEGH+ +  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATL-GEGHLGLAA  103

Query  71   DIANEESVNSAVDHILEKWSDIDGVVNNAGITKDGLLLRMKSEDFDSVVNTNLRGTFLVT  130
            ++A+E  V+ AV  I+E  + ID +VNNAGIT+    L +++ D+D V++ +LRGT+L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  131  KAFTKPMMKARKGSIVNIVSIIGETGNA--GQANYAASKAGTIAFSKSVALELGSRNVRV  188
            +A    M     GSIV + S+ ++ G +  G ++Y+A+KAG ++++K++A E+G+ ++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  189  NNVAPGYIATEMT-DVLSEDVKSKMMEKIPLAKIGEGSDVAQAVRFLLSDESKYITGHTL  247
            N++APG I T++T +++ ++ +  ++E IPL+++G + DVA+A  FL SD S Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  248  DVNGGM  253
            DVNGGM
Sbjct  284  DVNGGM  289

649) fabG in NC_019567


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 7/246 (2%)

Query  6    LQGKKIVVTGGS--RGIGAAIVKLLADEGAQVAFTYSSREEAAQQVAHSLTGEGHFYIKM  63
            LQGK  ++TG++  RGIG A    +A++GA+V +     E AA++ A +L GEGH+ +  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATL-GEGHLGLAA  103

Query  64   DIANEESVNSAVDHILEKWSDIDGVVNNAGITKDGLLLRMKAEDFDSVVNTNLRGTFLVT  123
            ++A+E  V+ AV  I+E  + ID +VNNAGIT+    L +++ D+D V++ +LRGT+L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  124  KAFTKPMMKARKGSIVNIVSIIGETGNA--GQANYAASKAGTIAFSKSVALELGSRNVRV  181
            +A    M     GSIV + S+ ++ G +  G ++Y+A+KAG ++++K++A E+G+ ++R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  182  NNVAPGYIATEMT-DVLSEDVKSKMMDKIPLAKIGEGSDVAQAVRFLLSDESKYITGHTL  240
            N++APG I T++T +++ ++ +  +++ IPL+++G + DVA+A  FL SD S Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  DVNGGM  246
            DVNGGM
Sbjct  284  DVNGGM  289

650) ELI_1614 in NC_014624


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 168/249 (68%), Gaps = 11/249 (4%)

Query  1    MENKTALITGAS--RGIGRAIALNLAKEGYNIAI-NYNGNaekaaavkeeceaFGVRAMI  57
            ++ K A+ITGA+  RGIGRA A+ +A++G  + I + + +A + AA       +G+ A  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA--  103

Query  58   CQCNVADNAAVKEMVDQVVTEFGTIDVLVNNAGITDDALILRMKEEAFDRVIDTNLKGCF  117
               NVAD++ VK+ V  ++ +FG IDVLVNNAGIT+    L ++   +D+V+D +L+G +
Sbjct  104  ---NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NCTQYVSKVMLkkkkgkIINMASVVGIGGNA--GQANYAASKAGVIALTKTTAKEFASRN  175
              +Q V   M  +  G I+ M+SV +  G +  G ++Y+A+KAGV++L K+ A+EF++ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  ITANAIAPGFIESDMSGAL-SEKVQEEILSQIPLKRYGTPQDVADLTVFLAGDKSSYMTG  234
            I  N+IAPG+I++D++G+L  +  ++ I+  IPL R G++QDVA+ ++FLA+D SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  235  QVFSIDGGM  243
              + ++GGM
Sbjct  281  ITLDVNGGM  289

651) LVIS_2241 in NC_008497


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 168/249 (68%), Gaps = 10/249 (4%)

Query  6    LQGKVAIITGAASGQGAEEAR--LFAKEGAQVVATDVQAAPLSQLEQEIQQENGNVILTI  63
            LQGK+AIITGAAS +G   A    FA++GA+VV  D++ ++     ++     G+  L +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESA----ARDAAATLGEGHLGL  101

Query  64   TQDVASESGWKQVVTSTIEPFHKIDILINNAGVTGKTWGLADTTVSDWNQVMNINALGNY  123
            + +VA ES  KQ V++ IE F +ID+L+NNAG+T     L D   +D ++V++++  G  
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTL-DIRPGDYDKVLDVSLRGTL  160

Query  124  LGMKYVVPEMKKVGQGSIVNISSLAGIHGIG--GATPYAASKGATRLLSMGAARDLGPDH  181
            L  + V+P M+  G GSIV +SS+++ +G G  G+  Y+A+K++   L+ + AR++GPD+
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  182  IRVNSIHPGFIETPMISDFTKDASVKQSVIDSVPLGYLGKPADVAYAALFLASDEGRFVT  241
            IR+NSI PG+I+T + +++ +D   ++++I+++PLG LG + DVA AALFLASD + ++T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  242  GSQLVIDGG  250
            G  L ++GG
Sbjct  280  GITLDVNGG  288

652) Tresu_0406 in NC_015385


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 167/250 (67%), Gaps = 9/250 (3%)

Query  1    MLLKNKKALVTGSS--RGIGRKIVEVFLANGCEVWGMCTKESAGKAELEKFAAENGTAFH  58
            MLL+ K A++TG++  RGIGR     F  +G  V  +   ESA++      AA  G +  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDA----AATLGEGHL  99

Query  59   EFYADAGNAEVLTTAVKNALGESGGFDVLVNNAGITRDTLSFRMKKEDWDSVLAVNLTSA  118
             + A+ ++   +  AV   + + G +DVLVNNAGIT+   ++ ++  D D VL V+L ++
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLVCQIISNDMIHKKSGSIINMASIVGIHGGA--GQVNYSASKGGLIAFSKSLAKEVGSR  176
            +L+ Q +   M  + SGSI+ M+S+ + +GG+  G  +YSA+K+G+++++K++A+E G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GVRVNCIAPGFIETDMTNAVKEEIRK-AWVEGIPLKRAGKPEDVANAALFLASDLSLYVT  235
             +R+N IAPG+I+TD+T ++ ++ R+ A +EGIPL R G ++DVANAALFLASDLS Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  AQVIGVDGGM  245
            +  ++V+GGM
Sbjct  280  GITLDVNGGM  289

653) Cha6605_4572 in NC_019697


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 173/252 (69%), Gaps = 13/252 (5%)

Query  4    LLAGQVAIVTGAS--RGIGRAIAIQLAQVGAKVAVNYASSSGAADELVAQIIGNGGEAIA  61
            LL G++AI+TGA+  RGIGRA A+ +AQ GA+V +     S+A D   A  +G+G   ++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDA--AATLGEG--HLG  100

Query  62   VGADVSKPEQVEALVSTVMDKWGRIDVLVNNAGITRDTLLLRMKLEDWQAVIDTNLTGVF  121
            ++A+V+   QV   V+T+++  GRIDVLVNNAGIT+    L ++  D + V+D +L G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  SCTRAVSKIMLKQKSGRIINIASVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELSTRG  179
              ++AV   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNAVAPGFIATDMTNDL----KAEGILQFIPLGRYGQPEEVAGMVRFLAADPAAAYIT  235
            I +N++APG+I TD+T +L    + ++I++ IPLGR G +++VA    FLA+D  ++Y+T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSYLT  279

Query  236  GQTFNVDGGMVM  247
            G T++V+GGM++
Sbjct  280  GITLDVNGGMLI  291

654) PMN2A_1785 in NC_007335


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 102/253 (41%), Positives = 171/253 (68%), Gaps = 15/253 (5%)

Query  6    LLEGQTAIVTGAS--RGIGKAIAIFLAKEGAEVIINYSSSLENANKVVSEIN-SFGGKAY  62
            LL+G+ AI+TGA+  RGIG+A A+ +A++GA V+I     L+  +    +   ++G    
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-----LDLDESAARDAAATLGEGHL  99

Query  63   PLQADISNENSVNELIKTVLEKNNKIDVLVNNAGITKDGLLMRMKTDDWQKVLDLNLSGV  122
             L A++++E+ V++ + T++E   +IDVLVNNAGIT+    + ++ +D +KVLD++L G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  123  FYCTRAVSRQMLKQKKGRIINITSVVGLMGNP--GQANYSAAKAGVVGLTQSAAKEFASR  180
            +  ++AV   M  Q  G I+ ++SV +  G    G ++YSAAKAGV+GL ++ A+EF++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GITVNAVAPGFISTDMTKDL----NSESILSAIPLGRFGNPEDVAGAVKFLAADPSASYI  236
             I +N++APG+I TD+T +L      ++I+ +IPLGR+G ++DVA A  FLA+D S SY+
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLS-SYL  278

Query  237  TGQVIQVDGGMVM  249
            TG  ++V+GGM++
Sbjct  279  TGITLDVNGGMLI  291

655) fabG in NC_006348


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

656) fabG in NC_008836


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

657) fabG in NC_009080


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

658) fabG in NC_008785


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

659) fabG in NC_009076


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

660) fabG in NC_007434


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

661) fabG in NC_009074


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

662) BPC006_I2890 in NC_018527


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

663) fabG in NC_006350


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

664) fabG in NC_021884


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

665) fabG in NC_012695


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 107/250 (43%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T GL Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

666) Lcho_3979 in NC_010524


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (492),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 106/254 (42%), Positives = 168/254 (67%), Gaps = 14/254 (5%)

Query  1    MRLKNKVSIITGAA--QGIGLATALKFAREGAIVIVCDLRQAAVDAAVAQCRELGALADG  58
            M L+ K++IITGAA  +GIG ATA+ FA++GA V++ DL ++A   A A    LG    G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLG  100

Query  59   FALDVTDRTAVDAMVAAVKARHGRIDTLVNNAGITKDARLQKMTIEQFDAVIDVNLRAVF  118
            +A +V+D + V   VA++  + GRID LVNNAGIT+  +   +   ++D V+DV+LR+ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  HCAQAVADTMVEQGAGVILNASSVVGIYGN--FGQTNYAATKFGVIGFTKTWSRELGPKG  176
              +QAV  TM  QG+G I+  SSV +  G   FG  +Y+A+K GV+G+ K+ +RE+GP  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAVAPGFIETPILATIPDKVMEQMRH----DVPLRRLGKPEEIANVYAFLASDEASY  232
            +R+N++APG+I+T I + +   + ++ RH    ++PL RLG ++++AN   FLASD +SY
Sbjct  221  IRINSIAPGLIHTDITGGL---MQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  233  INGTVIEVAGGLTV  246
            + G  ++V GG+ +
Sbjct  278  LTGITLDVNGGMLI  291

667) Pnuc_0400 in NC_009379


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (492),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 169/246 (69%), Gaps = 8/246 (3%)

Query  5    LSGQIALVTGAS--RGIGQAIADELVSCGAKVIGTATSESGANAINERLKPSGGAGLVLN  62
            L G+IA++TGA+  RGIG+A A  +   GA+V+     ES+A      L   G  GL  N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGHLGLAAN  104

Query  63   VTAPNACEEIIDQIVKEYGGINILVNNAGITRDNLSMRMKGDEWTDVIDTNLSAVFRLSQ  122
            V+  +   + +  I+ ++G I++LVNNAGIT+   ++ ++ ++   V+D +L + + +SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  123  AVMRPMMKARG-GRIINITSIVGHMGNP--GQANYAAAKAGVSGMTRALAREIGSRNITV  179
            AV+ P M+A+G G I+ ++S+ ++ G    G ++Y+AAKAGV G+ +A+ARE+G+ +I +
Sbjct  165  AVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NCVAPGFIDTDMTRAL-SEDQQNALKVNIPLARLGSPEDVAQAVAFLASPAAAYITGNTL  238
            N +APG+I+TD+T +L  +++++A+   IPL+RLG+++DVA+A  FLAS  ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGL  244
            +VNGG+
Sbjct  284  DVNGGM  289

668) fabG in NC_009442


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

669) fabG in NC_009443


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

670) fabG in NC_017622


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

671) fabG in NC_012926


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

672) fabG in NC_017620


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAEDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

673) SSGZ1_1623 in NC_017617


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

674) fabG in NC_017618


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

675) fabG in NC_012925


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

676) fabG in NC_018526


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

677) NJAUSS_1662 in NC_020526


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

678) fabG in NC_012924


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

679) fabG in NC_017619


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

680) fabG in NC_015433


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAEDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

681) fabG in NC_021213


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

682) fabG in NC_007951


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 169/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQIAIVTGAS--RGIGRAIALELARQGATVIGTATSESGAAAISEAFNAAGASGRGAV  62
            L+ +IAI+TGA+  RGIGRA A+ +A++GA V+     ES+A   + ++   G +  G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLGLA  102

Query  63   LNVNDAAAAEALIDGTVKEFGALHVLVNNAGITQDQLAMRMKDDDWDAVIDTNLKSVFRL  122
             NV D +     +   + +FG ++VLVNNAGITQ   ++ ++ +D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKAKG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTRTL-PEEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

683) fabG in NC_009077


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 104/246 (43%), Positives = 166/246 (68%), Gaps = 7/246 (2%)

Query  21   LLSGQTAVVTGGA--QGLGYAIAERFVSEGARVVLGDLDLDATEAAAKRLGGPDVATAVR  78
            LL G+ A++TG+A  +G+G A A  F  +GARVV+ DLD  A+  AA  LG  +++ A  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  79   CDVTRadevdalvaaaveRFGGLDVMVNNAGITRDATLRKMTEEQFDQVIAVHLKGTWNG  138
             +V+   +V   VA+ +E+FG +DV+VNNAGIT+      +   ++D+V+ V L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  139  LKSAAAIMRENKRGAMVNMSSISGK--VGLVGQTNYSAAKAGIVGMTKAAAKELAHLGVR  196
             ++  + MR +  G++V MSS+S++   G+ G  +YSAAKAG++G+ KA A+E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  197  VNAIQPGLIRSAMTEAMPQHIWDQKLAE-IPMGRAGEPAEVAKVALFLASDLSSYMTGTV  255
            +N+I PGLI++ +T ++ Q+ + + + E IP+GR G + +VA+ ALFLASDLSSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  256  LEVTGG  261
            L+V GG
Sbjct  283  LDVNGG  288

684) fabG in NC_008705


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 104/246 (43%), Positives = 166/246 (68%), Gaps = 7/246 (2%)

Query  21   LLSGQTAVVTGGA--QGLGYAIAERFVSEGARVVLGDLDLDATEAAAKRLGGPDVATAVR  78
            LL G+ A++TG+A  +G+G A A  F  +GARVV+ DLD  A+  AA  LG  +++ A  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  79   CDVTRadevdalvaaaveRFGGLDVMVNNAGITRDATLRKMTEEQFDQVIAVHLKGTWNG  138
             +V+   +V   VA+ +E+FG +DV+VNNAGIT+      +   ++D+V+ V L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  139  LKSAAAIMRENKRGAMVNMSSISGK--VGLVGQTNYSAAKAGIVGMTKAAAKELAHLGVR  196
             ++  + MR +  G++V MSS+S++   G+ G  +YSAAKAG++G+ KA A+E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  197  VNAIQPGLIRSAMTEAMPQHIWDQKLAE-IPMGRAGEPAEVAKVALFLASDLSSYMTGTV  255
            +N+I PGLI++ +T ++ Q+ + + + E IP+GR G + +VA+ ALFLASDLSSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  256  LEVTGG  261
            L+V GG
Sbjct  283  LDVNGG  288

685) fabG in NC_008146


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 104/246 (43%), Positives = 166/246 (68%), Gaps = 7/246 (2%)

Query  21   LLSGQTAVVTGGA--QGLGYAIAERFVSEGARVVLGDLDLDATEAAAKRLGGPDVATAVR  78
            LL G+ A++TG+A  +G+G A A  F  +GARVV+ DLD  A+  AA  LG  +++ A  
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA-  103

Query  79   CDVTRadevdalvaaaveRFGGLDVMVNNAGITRDATLRKMTEEQFDQVIAVHLKGTWNG  138
             +V+   +V   VA+ +E+FG +DV+VNNAGIT+      +   ++D+V+ V L+GT   
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  139  LKSAAAIMRENKRGAMVNMSSISGK--VGLVGQTNYSAAKAGIVGMTKAAAKELAHLGVR  196
             ++  + MR +  G++V MSS+S++   G+ G  +YSAAKAG++G+ KA A+E++   +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  197  VNAIQPGLIRSAMTEAMPQHIWDQKLAE-IPMGRAGEPAEVAKVALFLASDLSSYMTGTV  255
            +N+I PGLI++ +T ++ Q+ + + + E IP+GR G + +VA+ ALFLASDLSSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  256  LEVTGG  261
            L+V GG
Sbjct  283  LDVNGG  288

686) fabG in NC_014330


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 163/248 (66%), Gaps = 9/248 (3%)

Query  5    LKNKIALVTGGS--RGIGKKIAEALANEGANVVVTATNINKAQEVADELKSKYNVETLAL  62
            L+ KIA++TG++  RGIG+  A ++A++GA VV+   + + A++ A  L        L+L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE----GHLGL  101

Query  63   VHDVKSSESCKDVVAKTIEKFGSIDILVNNAGITRDMLVIQMDDSAWNDVIDTNLSGAFY  122
              +V      K+ VA  IE FG ID+LVNNAGIT+ +  +++  +  + V+D +L G++ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  TSREAAKSMLRARKGKIINISSVIGKMGNA--GQVNYaaakagiigiTKSMAKEFAPRGI  180
             S+    +M     G I+ +SSV ++ G +  G  +Y+AAKAG++G+ K+MA+EF+P  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  CVNAIAPGFIQTDMTGVLAEDAVKK-IMDITPLKKLGNAEDVANIVVFLASDLSNYITGE  239
             +N+IAPG+I+TD+TG L +D  +  I++  PL +LG A+DVAN  +FLASDLS+Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  VIAVDGGM  247
             + V+GGM
Sbjct  282  TLDVNGGM  289

687) B2904_orf838 in NC_018607


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 163/248 (66%), Gaps = 9/248 (3%)

Query  5    LKNKIALVTGGS--RGIGKKIAEALANEGANVVVTATNINKAQEVADELKSKYNVETLAL  62
            L+ KIA++TG++  RGIG+  A ++A++GA VV+   + + A++ A  L        L+L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE----GHLGL  101

Query  63   VHDVKSSESCKDVVAKTIEKFGSIDILVNNAGITRDMLVIQMDDSAWNDVIDTNLSGAFY  122
              +V      K+ VA  IE FG ID+LVNNAGIT+ +  +++  +  + V+D +L G++ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  TSREAAKSMLRARKGKIINISSVIGKMGNA--GQVNYaaakagiigiTKSMAKEFAPRGI  180
             S+    +M     G I+ +SSV ++ G +  G  +Y+AAKAG++G+ K+MA+EF+P  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  CVNAIAPGFIQTDMTGVLAEDAVKK-IMDITPLKKLGNAEDVANIVVFLASDLSNYITGE  239
             +N+IAPG+I+TD+TG L +D  +  I++  PL +LG A+DVAN  +FLASDLS+Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  VIAVDGGM  247
             + V+GGM
Sbjct  282  TLDVNGGM  289

688) BPP43_00340 in NC_019908


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 163/248 (66%), Gaps = 9/248 (3%)

Query  5    LKNKIALVTGGS--RGIGKKIAEALANEGANVVVTATNINKAQEVADELKSKYNVETLAL  62
            L+ KIA++TG++  RGIG+  A ++A++GA VV+   + + A++ A  L        L+L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE----GHLGL  101

Query  63   VHDVKSSESCKDVVAKTIEKFGSIDILVNNAGITRDMLVIQMDDSAWNDVIDTNLSGAFY  122
              +V      K+ VA  IE FG ID+LVNNAGIT+ +  +++  +  + V+D +L G++ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  TSREAAKSMLRARKGKIINISSVIGKMGNA--GQVNYaaakagiigiTKSMAKEFAPRGI  180
             S+    +M     G I+ +SSV ++ G +  G  +Y+AAKAG++G+ K+MA+EF+P  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  CVNAIAPGFIQTDMTGVLAEDAVKK-IMDITPLKKLGNAEDVANIVVFLASDLSNYITGE  239
             +N+IAPG+I+TD+TG L +D  +  I++  PL +LG A+DVAN  +FLASDLS+Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  VIAVDGGM  247
             + V+GGM
Sbjct  282  TLDVNGGM  289

689) WESB_1835 in NC_018604


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 163/248 (66%), Gaps = 9/248 (3%)

Query  5    LKNKIALVTGGS--RGIGKKIAEALANEGANVVVTATNINKAQEVADELKSKYNVETLAL  62
            L+ KIA++TG++  RGIG+  A ++A++GA VV+   + + A++ A  L        L+L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE----GHLGL  101

Query  63   VHDVKSSESCKDVVAKTIEKFGSIDILVNNAGITRDMLVIQMDDSAWNDVIDTNLSGAFY  122
              +V      K+ VA  IE FG ID+LVNNAGIT+ +  +++  +  + V+D +L G++ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  TSREAAKSMLRARKGKIINISSVIGKMGNA--GQVNYaaakagiigiTKSMAKEFAPRGI  180
             S+    +M     G I+ +SSV ++ G +  G  +Y+AAKAG++G+ K+MA+EF+P  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  CVNAIAPGFIQTDMTGVLAEDAVKK-IMDITPLKKLGNAEDVANIVVFLASDLSNYITGE  239
             +N+IAPG+I+TD+TG L +D  +  I++  PL +LG A+DVAN  +FLASDLS+Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  VIAVDGGM  247
             + V+GGM
Sbjct  282  TLDVNGGM  289

690) fabG in NC_014323


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 167/248 (68%), Gaps = 9/248 (3%)

Query  6    LQGQVALVTGAS--RGIGRAIATELARQGAKVIGTATSESGAAAITEYLAALGPEAGRGA  63
            LQG++A++TGA+  RGIGRA A  +A++GA+V+     ES+A   +   A+LG E+  G 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA---ATLG-EGHLGL  101

Query  64   VLNVNDAEASVALVEQVQKDFGSLSILVNNAGITQDQLAMRMKDEEWDSVIATNLTAVGR  123
              NV D       V  +  +FG + +LVNNAGITQ   ++ ++  + D V+  +L +   
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  124  LSRAVLRGMMKARTGRIINITSVVGEAGNP--GQMNYAAAKAGVAGMSRALAREIGSRNI  181
            +S+AV+  M    +G I+ ++SV ++ G    G  +Y+AAKAGV G+++A+ARE+G+ +I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  182  TVNCVAPGFIDTDMTRAL-NEQQSAAILQQIPLGRLGAAEEIAYAVAFLASPQAAYITGT  240
             +N +APG+I+TD+T +L ++++  AI++ IPLGRLGAA+++A A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  241  TLNVNGGM  248
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

691) fabG in NC_010628


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 105/254 (42%), Positives = 173/254 (69%), Gaps = 12/254 (4%)

Query  1    MTLLQGKVAIVTGAS--RGIGKAIAIELASQGaiavvnyasssaaaeavvteitavGGQA  58
            + LLQGK+AI+TGA+  RGIG+A A+ +A +GA  V+     SAA +A  T     G   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGH  98

Query  59   IAIQADVSKGDQVDALVNAVMEKFSRVDILVNNAGITRDTLLLRLKPEDWQAVIDLNLTG  118
            +++ A+V+   QV   V +++E F+R+D+LVNNAGIT+    L ++P D + V+D++L G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFLCTRAVSKIMLKQRSGRIINITSVAGQMGNP--GQSNYSAAKAGVIGFTKSVAKELAT  176
             +L ++AV   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E++ 
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGITVNAVAPGFITTDMTSDL---NNPEDILKYIPLGRFGQPEEVAGMVRFLAADPAANY  233
              I +N++APG+I TD+T++L   +  + I+  IPLGR+G +++VA    FLA+D  ++Y
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSY  277

Query  234  ITGQVFNVDGGMVM  247
            +TG  ++V+GGM++
Sbjct  278  LTGITLDVNGGMLI  291

692) fabG in NC_005042


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 176/253 (70%), Gaps = 15/253 (5%)

Query  6    LLIGQTAIVTGAS--RGIGKAIALNLAQAGAEVVV-NYANSATKAEEVVSLIKSTGGKAY  62
            LL G+ AI+TGA+  RGIG+A A+ +AQ GA VV+ +  +SA++ +   +L    G    
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-DAAATL----GEGHL  99

Query  63   ALQANVADESSVNELVDTVLEKSDHIDILINNAGITKDGLLMRMKTEDWQSVLNLNLTGV  122
            +L ANVADES V++ V T++E  ++ID+L+NNAGIT+    + ++  D + VL+++L G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  123  FLCTKAVSRSMLKQRKGRIINITSVVGLMGNA--GQANYASAKAGVIGFTKSAAKEFASR  180
            +L ++AV  +M  Q  G I+ ++SV +  G +  G ++Y++AKAGV+G+ K+ A+EF++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GITVNAVAPGFIETDMTKELDAE----PILSAIPLGHFGSTEHVAGTVRFLAADPASSYI  236
             I +N++APG+I+TD+T  L  +    +I+ +IPLG++G++++VA +  FLA+D  SSY+
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSYL  278

Query  237  TGQVLQVDGGMVM  249
            TG  L+V+GGM++
Sbjct  279  TGITLDVNGGMLI  291

693) DEFDS_0152 in NC_013939


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (491),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 102/253 (41%), Positives = 171/253 (68%), Gaps = 10/253 (3%)

Query  1    MILKDKVALVTGGS--RGIGRAVAIKLAQLGCKVAINYSSNEQKAKEVADYIKNTLSGEC  58
            M+L++K+A++TG++  RGIGRA A+ +AQ G +V I    +E  A++ A     TL+   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAA----ATLGEGH  98

Query  59   IIYKGNVADEEEVKGMVKFIENEFGAIDILVNNAGITKDNIILRLKTADFDEVFNVNIKG  118
            +   +NVADE +VK  V  I ++FG ID+LVNNAGIT+    L ++ +D+D V++V+++G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNCIKAVARGMMKKRYGKIINISSVVGFTGN--IGQANYVVTKSGLIGLTKSVALELAT  176
            ++   +AV   M  +  G I+ +SSV +  G   +G ++Y  +K+G++GL K++A E++ 
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGIRVNAVAPGFIDTEMTQSL-SIDVKDEMLKKIPLGYFGKPEDVANAVAFLASPESDYI  235
              IR+N++APG+I+T++T +L   + ++ ++  IPLG +G ++DVANA  FLAS  S Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGTTIHVNGGMYF  248
            TG T++VNGGM +
Sbjct  279  TGITLDVNGGMLI  291

694) Fbal_1397 in NC_014541


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 166/246 (68%), Gaps = 5/246 (2%)

Query  7    LSGKVALVTGAS--RGIGRAIAEQLvaagatvigtatSDRGAEAISAYLGDAGCGLVLNV  64
            L GK+A++TGA+  RGIGRA A  +   GA V+     + +A   +A LG++  GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDPASIEALFETIKGQYGDVDILVNNAGITRDNLMMRMKDSEWTDIIDTNLTSIFRTSKA  124
            +D + +     TI  ++G +D+LVNNAGIT+    + ++ ++   ++D +L + +  S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VLRSMMKKRHGRIINIGSVVGTMGNP--GQVNYSAAKAGLLGFTKSLAKEVASRGITVNA  182
            V+ +M  +  G I+ ++SV +  G    G  +YSAAKAG+LG+ K++A+E ++  I +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTEEL-TDDQKAAIMGQVPVARLGQAQEIADAVVFLASDRASYITGETLHV  241
            IAPG+I+TD+T  L  D+++ AI+  +P++RLG AQ++A+A +FLASD +SY+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGMVM  247
            NGGM++
Sbjct  286  NGGMLI  291

695) Btus_1443 in NC_014098


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 172/247 (70%), Gaps = 9/247 (3%)

Query  7    EGRVALVTGGS--RGIGRAVCLALAARGTAVAVNYVHREEAAADVVrrieaaggrarafg  64
            +G++A++TG++  RGIGRA  +++A +G+ V +  ++ +E+AA       + G    +++
Sbjct  47   QGKIAIITGAASERGIGRATAVTFAQHGARVVI--LDLDESAAR--DAAATLGEGHLGLA  102

Query  65   gDVSDPSQADGLVREVLEAFGRLDILVNNAGITRDMLILRMKDDDWDAVMNTNLKGAFHC  124
            ++V+D SQ    V  ++E FGR+D+LVNNAGIT+ +  L ++ +D D V++ +L+G++  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  125  IRAAARPMMKQRYGRIVNITSVAGVMGNP--GQANYSAAKAGLIGLTKTAAREFASRGIT  182
             +A    M  Q  G IV ++SV++  G    G ++YSAAKAG++GL K+ AREF++  I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  183  VNAVAPGLIETDMTAA-MTEEAVQALHDQIPLGRLGRPEEVAEAVAFLSSEAAGYITGHV  241
            +N++APGLI+TD+T++ M +E  +A+ + IPLGRLG +++VA+A  FL+S+ ++Y+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  242  LHVDGGM  248
            L+V+GGM
Sbjct  283  LDVNGGM  289

696) fabG in NC_004129


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 105/249 (43%), Positives = 165/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRMGATVVGTATSASGAERIAATLKENGIQGTG  58
            M LQGK+A++TGA+  RGIG+A A+ +++ GA VV      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LELNVTSDESVAAVLASITEQFGAPAILVNNAGITRDNLMMRMKDDEWYDVVDTNLNSLY  118
            L  NV+ +  V   +A+I E+FG   +LVNNAGIT+    + ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRS  176
             +S++V+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQREALLTQIPLGRLGQAQEIAQVVAFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A++  IPLGRLG AQ++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

697) BC1003_2518 in NC_014539


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 169/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQIAIVTGAS--RGIGRAIAMELARQGATVIGTATSESGAAAISEAFNAAGVSGRGAV  62
            L+ +IAI+TGA+  RGIGRA A+ +A++GA V+     ES+A   + ++  + +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LDVNDAAAAEALIDGTVKEFGALHVLVNNAGITQDQLAMRMKDDDWDAVIDTNLKSVFRL  122
             +V D +     +   + +FG ++VLVNNAGITQ   ++ ++ +D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKAKG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTRTL-PEEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TMHVNGGM  246
            T++VNGGM
Sbjct  282  TLDVNGGM  289

698) fabG in NC_019952


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  134 bits (490),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 94/224 (42%), Positives = 153/224 (69%), Gaps = 5/224 (2%)

Query  27   FVAEGARVVLGDVNLEATQVAAKRLGGDDVAQAVRCDVTHADDVDILIRTAVERFGGLDV  86
            F  +GARVV+ D++  A++ AA  LG ++++ A   +V++  +V   + T +E+FG +DV
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEGHLGLAA--NVADESQVKQAVATIIEHFGRIDV  127

Query  87   MVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGK  146
            +VNNAGIT+      +   ++D+V+ V L+GT   ++   + MR +  G+IV MSSVS++
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  147  --VGMVGQTNYSAAKAGIIGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQK  204
               G+ G  +YSAAKAG++G+ KA A+E++   IR+N+IAPGLI++ +T ++ Q  + + 
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  205  LAE-VPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI  247
            + E +P+GR G + +VA+ A+FLASDLSSY+TG  LDV GG +I
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

699) Psefu_2729 in NC_015556


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (489),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 107/249 (43%), Positives = 166/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAVVIGTATSEAGAERIAATLKENGIEGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+     E++A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LMLNVSSDESVAATLEKIQKDFGQVLVLVNNAGITRDNLMLRMKDEEWYDVIDTNLNSLY  118
            L  NV+ +  V  ++  I  +FG++ VLVNNAGIT+    L ++  +   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKAVLRGMTKARFGRIINIGSVVGAMGNA--GQVNYAAAKAGLEGFGRAMAREVGSRS  176
             +S+AV+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+G+AMARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVAPGFIDTDMTREL-PEAQREALLTQIPLGRLGQAQEIANVVSFLASDGAAYVTG  235
            I +N++APG+I+TD+T  L  + +R+A++  IPLGRLG AQ++AN   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

700) PSEBR_a4051 in NC_015379


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (489),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 166/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAIVIGTATSASGAERIAATLKENGIQGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LELNVTSDESVAAVLASIQEQFGAPAILVNNAGITRDNLMMRMKDDEWFDVIDTNLNSLY  118
            L  NV+ +  V   +A+I E+FG   +LVNNAGIT+    + ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRS  176
             +S++V+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQREALLTQIPLGRLGQAQEIASVVAFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A++  IPLGRLG AQ++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

701) Tbd_1549 in NC_007404


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (489),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 173/247 (71%), Gaps = 8/247 (3%)

Query  12   LQGRVALVTGAS--RGIGQAIALALGEAGATVVGTATSDKGAQAIGDYLVAAGVKGAGMT  69
            LQG++A++TGA+  RGIG+A A+++++ GA VV     + +A+  +  L  + +   G++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  70   LdvtdaaevdaviaaIGKQFGDIGVLVNNAGITRDNLLMRMKDEEWDDILATNLTSVFRL  129
             +V+D ++V   +A+I  +FG I+VLVNNAGIT+    + ++  + D +L  +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  130  SRAVLRAMMKARSGRIISIASVVGAMGNA--GQTNYSAAKAGIMGFTKSLAREVGSRNIT  187
            S+AV+ +M    SG I+ ++SV +  G +  G  +YSAAKAG++G+ K++ARE G+ +I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  188  VNCVAPGFIDTDMTRAL-PDAQREALLAHIPLGRLGAADDIAQAVAFLASPAAGYISGTT  246
            +N +APG+I+TD+T +L  D +R+A++  IPLGRLGAA+D+A+A  FLAS  ++Y++G T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  247  LHVNGGM  253
            L+VNGGM
Sbjct  283  LDVNGGM  289

702) fabG in NC_013416


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (489),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 99/244 (41%), Positives = 163/244 (67%), Gaps = 5/244 (2%)

Query  1    MQGKIALVTGAT--RGIGRAVAEELTSKGAFVIGTATSEKGAETISAYLGEKGIGLVLNV  58
            +QGKIA++TGA+  RGIGRA A  ++  GA V+     E +A   +A LGE  +GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   ADQASIEGVLERIKKEFGDIDILVNNAGITRDNLLMRMKDEEWFDILQTNLSSVYHLSKA  118
            AD++ +   +  I  +FG ID+LVNNAGIT+    + ++  +   +L+ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  MLRSMMKKRFGRIINIGSVVGSSGNP--GQSNYCAAKAGLVGFSKALAKEVASRGITVNV  176
            ++ +M  +  G I+ ++SV +  G    G ++Y AAKAG++G++KA+A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  177  VAPGFIATDMT-EVLSEELKNNLLTQIPAGRLGEPKDIAKAVAFLASDDAAYINGITLHV  235
            +APG+I TD+T  ++ +E ++ ++  IP GRLG ++D+A+A  FLASD ++Y+ GITL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  236  NGGM  239
            NGGM
Sbjct  286  NGGM  289

703) BpOF4_13545 in NC_013791


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 100/234 (43%), Positives = 157/234 (68%), Gaps = 8/234 (3%)

Query  16   QATAHCFLNQGISVVILDIDEEKGKAACEELSGSGGDVTFVRCDVSNEEEVKNACQKAAE  75
            +ATA  F ++G  VVILD+DE  ++ A   L+   G++ +   +V++E +VK+A     E
Sbjct  64   RATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLA-ANVADESQVKQAVATIIE  120

Query  76   TYGQIDILVNNAGIGNNETTLTEMSLFEWQKVIDVNLTGVFLGMKHSIPFMRKNG-GAIV  134
             +G+ID+LVNNAGI +   TL ++   + +KV+DV+L G +L  +  IP MR +G G+IV
Sbjct  121  HFGRIDVLVNNAGITQPIKTL-DIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIV  179

Query  135  NVSSLLGFKGKK-FVAP-YNASKAGVITLTKNAALEYGRDRIRVNAVAPGVIDTSIVDGW  192
             +SS+ + +G   F +P Y+A+KAGV+ L K  A E+G D+IR+N++APG+I+T I +G 
Sbjct  180  CMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGL  239

Query  193  RTHEEKWKIISTANALKRVGEAQEVAHAIEFLASDKASYITGTTLMVDGGGLTY  246
              ++E++  I  + +L R+G AQ+VA+A  FLASD +SY+TG TL V+GG L  
Sbjct  240  -MQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLIH  292

704) fabG6 in NC_021237


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (489),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 105/249 (43%), Positives = 165/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRMGATVVGTATSASGAERIAATLKENGIQGTG  58
            M LQGK+A++TGA+  RGIG+A A+ +++ GA VV      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LELNVTSDESVAAVLASIAEQFGAPAILVNNAGITRDNLMMRMKDDEWYDVVDTNLNSLY  118
            L  NV+ +  V   +A+I E+FG   +LVNNAGIT+    + ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRS  176
             +S++V+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQREALLTQIPLGRLGQAQEIAQVVAFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A++  IPLGRLG AQ++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

705) fabG in NC_010278


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 167/247 (68%), Gaps = 6/247 (2%)

Query  1    MQGKIALVTGAT--RGIGKAIAEELAAKGATVIGTATSEKGAESISAYLGEHGKGLVLNV  58
            +QGKIA++TGA+  RGIG+A A  +A  GA V+     E +A   +A LGE   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   TDADSIEAVLAQIKADFGDIDILVNNAGITRDGLLMRMKEDDWFDIIQTNLTSVYRLSKA  118
            +D   +   +A I  +FG ID+LVNNAGIT+    + ++ +D   +++ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VLRPMMKKG-GRIVTIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNV  175
            V+  M  +G G IV ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  176  VAPGFIATDMTDEL-NEDQKQAILSQIPVGQLGSAQDIAKAVAFLASDDAKYITGETIHV  234
            +APG+I TD+T+ L ++++++AI+  IP+G+LG+AQD+A+A  FLASD + Y+TG T++V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  235  NGGLYMN  241
            NGG+ ++
Sbjct  286  NGGMLIH  292

706) fabG in NC_009053


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 167/247 (68%), Gaps = 6/247 (2%)

Query  1    MQGKIALVTGAT--RGIGKAIAEELAAKGATVIGTATSEKGAESISAYLGEHGKGLVLNV  58
            +QGKIA++TGA+  RGIG+A A  +A  GA V+     E +A   +A LGE   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   TDADSIEAVLAQIKADFGDIDILVNNAGITRDGLLMRMKEDDWFDIIQTNLTSVYRLSKA  118
            +D   +   +A I  +FG ID+LVNNAGIT+    + ++ +D   +++ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VLRPMMKKG-GRIVTIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNV  175
            V+  M  +G G IV ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  176  VAPGFIATDMTDEL-NEDQKQAILSQIPVGQLGSAQDIAKAVAFLASDDAKYITGETIHV  234
            +APG+I TD+T+ L ++++++AI+  IP+G+LG+AQD+A+A  FLASD + Y+TG T++V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  235  NGGLYMN  241
            NGG+ ++
Sbjct  286  NGGMLIH  292

707) APP7_2079 in NC_010939


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 167/247 (68%), Gaps = 6/247 (2%)

Query  1    MQGKIALVTGAT--RGIGKAIAEELAAKGATVIGTATSEKGAESISAYLGEHGKGLVLNV  58
            +QGKIA++TGA+  RGIG+A A  +A  GA V+     E +A   +A LGE   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   TDADSIEAVLAQIKADFGDIDILVNNAGITRDGLLMRMKEDDWFDIIQTNLTSVYRLSKA  118
            +D   +   +A I  +FG ID+LVNNAGIT+    + ++ +D   +++ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VLRPMMKKG-GRIVTIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNV  175
            V+  M  +G G IV ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  176  VAPGFIATDMTDEL-NEDQKQAILSQIPVGQLGSAQDIAKAVAFLASDDAKYITGETIHV  234
            +APG+I TD+T+ L ++++++AI+  IP+G+LG+AQD+A+A  FLASD + Y+TG T++V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  235  NGGLYMN  241
            NGG+ ++
Sbjct  286  NGGMLIH  292

708) BC1001_2547 in NC_015136


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (489),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 103/248 (42%), Positives = 168/248 (68%), Gaps = 10/248 (4%)

Query  5    LDKHIAIVTGAS--RGIGRAIALELARQGATVIGTATSESGAAAISEAFNAAGVSGRGAV  62
            L+  IAI+TGA+  RGIGRA A+ +A++GA V+     ES+A   + ++  + +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LDVNDAAAAEALIDGTVKEFGALHVLVNNAGITQDQLAMRMKDDDWDAVIDTNLKSVFRL  122
             +V D +     +   + +FG ++VLVNNAGITQ   ++ ++ +D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKAKG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTRTL-PEEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TMHVNGGM  246
            T++VNGGM
Sbjct  282  TLDVNGGM  289

709) WQG_3910 in NC_020515


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 165/246 (68%), Gaps = 5/246 (2%)

Query  1    MQNKIALVTGAT--RGIGKAIAEELIVKGAFVIGTATSEKGAESISAYLGEKGEGLVLNV  58
            +Q KIA++TGA+  RGIG+A A  +   GA V+     E +A   +A LGE   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   TDETSIEQALKAIKEQFGDIDILVNNAGITRDNLLMRMKDDEWFDIMQTNLTSVYRLSKA  118
            +DE+ + QA+ +I E+FG ID+LVNNAGIT+    + ++ ++   +++ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VMRSMMKKRFGRIISIGSVVGSMGNP--GQANYCAAKAGVIGFSKSLAKEVASRGITVNV  176
            V+ +M  +  G I+ ++SV +  G    G ++Y AAKAGV+G++K++A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  177  VAPGFIATDMTDEL-NEEQRNVILSQIPSGELGSPSDIAKAVAFLASEDARYINGETLHV  235
            +APG+I TD+T+ L ++E+R+ I+  IP G LG++ D+A+A  FLAS+ + Y+ G TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  236  NGGLYM  241
            NGG+ +
Sbjct  286  NGGMLI  291

710) Arth_0841 in NC_008541


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (488),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 102/245 (42%), Positives = 165/245 (68%), Gaps = 4/245 (1%)

Query  10   RTVVLTGAASTRGIGRAAADRMASEGWSIAILDINaedakaaaaeIGSNRAVKAIgvgad  69
            +  ++TGAAS RGIGRA+A   A +G  + ILD++   A+ AAA +G  +    +G++A+
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----LGLAAN  104

Query  70   vsdaasvdRAIREIEESLPPIVALANLAGISSPTTFMETTVEEWDKVFAINMRGTFIVSQ  129
            V+D + V +A+  I E +  I  L N AGI+ P   ++    + DKV+ +++RGT+++SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  130  RVLKGMIERKLGRIVSISSISAQRGGGTYSKVAYSASKAGIIGFTRALAREVGEFGVTVN  189
             V+  M  +  G IV +SS+SAQRGGG ++   YSA+KAG++G+ +A+ARE G   + +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  190  AIAPGPIDTDIMGGTLTDERKAQMSEGIMMGRVGTREEVAALISFLLGQDAGYITAATYD  249
            +IAPG I+TDI GG + DER+  + EGI +GR+G+ ++VA    FL ++ ++Y+T+ T D
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  250  INGGL  254
            +NGG+
Sbjct  285  VNGGM  289

711) BUPH_03121 in NC_018695


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (487),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 168/248 (68%), Gaps = 10/248 (4%)

Query  5    LDKHIAIVTGAS--RGIGRAIALELARQGATVIGTATSESGAAAISEAFNAAGVSGRGAV  62
            L+  IAI+TGA+  RGIGRA A+ +A++GA V+     ES+A   + ++  + +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LDVNDAAAAEALIDGTVKEFGALHVLVNNAGITQDQLAMRMKDDDWDAVIDTNLKSVFRL  122
             +V D +     +   + +FG ++VLVNNAGITQ   ++ ++ +D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKAKG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTRTL-PEEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TMHVNGGM  246
            T++VNGGM
Sbjct  282  TLDVNGGM  289

712) fabG in NC_016830


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (487),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 166/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRNGAIVIGTATSASGAERIAATLKENGIQGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LELNVTSDESVAAVLASIQEQFGAPAILVNNAGITRDNLMMRMKDDEWFDVIDTNLNSLY  118
            L  NV+ +  V   +A+I E+FG   +LVNNAGIT+    + ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRS  176
             +S++V+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQREALLTQIPLGRLGQAQEIASVVAFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A++  IPLGRLG AQ++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

713) NATL1_05081 in NC_008819


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (487),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 102/253 (41%), Positives = 171/253 (68%), Gaps = 15/253 (5%)

Query  6    LLEGQTAIVTGAS--RGIGKAIAIFLAKEGAEVIINYSSSLENANKVVSEIN-SFGGKAY  62
            LL+G+ AI+TGA+  RGIG+A A+ +A++GA V+I     L+  +    +   ++G    
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-----LDLDESAARDAAATLGEGHL  99

Query  63   PLQADISNENSVNDLIKTVLEKNNKIDVLVNNAGITKDGLLMRMKTDDWQKVLDLNLSGV  122
             L A++++E+ V++ + T++E   +IDVLVNNAGIT+    + ++ +D +KVLD++L G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  123  FYCTRAVSRQMLKQKKGRIINITSVVGLMGNP--GQANYSAAKAGVVGLTQSAAKEFASR  180
            +  ++AV   M  Q  G I+ ++SV +  G    G ++YSAAKAGV+GL ++ A+EF++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  181  GITVNAVAPGFISTDMTKDLDSE----SILSAIPLGRFGNPEDVAGAVRFLAADPSASYI  236
             I +N++APG+I TD+T +L  +    +I+ +IPLGR+G ++DVA A  FLA+D S SY+
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLS-SYL  278

Query  237  TGQVIQVDGGMVM  249
            TG  ++V+GGM++
Sbjct  279  TGITLDVNGGMLI  291

714) Trebr_0696 in NC_015500


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (487),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 104/250 (42%), Positives = 170/250 (68%), Gaps = 9/250 (3%)

Query  1    MLLQGKKALVTGSS--RGIGKEIARRFLEEGAEVWGLCSKPSaaraeleayaaeKGSAFH  58
            MLLQGK A++TG++  RGIG+  A  F ++GA V  L        +     AA  G +  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL----DLDESAARDAAATLGEGHL  99

Query  59   EICADAGNAENLSETVKAALADAGCFDILVNNAGITRDGLSFRMSMDDWQKVLDVNLTGV  118
             + A+ ++  ++ ++V + + + G +D+LVNNAGIT+   ++ +  +D +KVLDV+L G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FIVSQLVSSAMIRKRSGSIINMTSIVGLHGQG--GQVNYSASKAGLIGLTKSLAKECGGR  176
            +++SQ V ++M  + SGSI+ M+S+ + +G G  G  +YSA+KAG++GL K++A+E G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GVRVNAIAPGFIDTDMTRAVNEEARK-VWLEGIPLKRAGQVSDIANAAVFLASDMSSYIT  235
             +R+N+IAPG+I+TD+T ++ ++ R+   +EGIPL R G   D+ANAA+FLASD+SSY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  AQVLGVDGGM  245
            +  L+V+GGM
Sbjct  280  GITLDVNGGM  289

715) Daro_2017 in NC_007298


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (487),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 103/253 (41%), Positives = 174/253 (69%), Gaps = 8/253 (3%)

Query  1    MNMLTDKIALVTGAT--RGIGRAIALELGKQGATVIGTATSEEGAGKISAYLLEAGIKGK  58
            + +L +KIA++TGA+  RGIGRA A+ ++++GA V+     E +A   +A L E+ +   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---  99

Query  59   GIALNVCDVAQTDAALSDIAKEFGAITILVNNAGITRDNLTMRMGDDEWDAVIDTNLKAV  118
            G+A NV D +Q   A++ I  +FG I +LVNNAGIT+   T+ +  ++ D V+D +L++ 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FRLSRGVMRGMMKARFGRIVNISSVVGYSGNA--GQANYCAAKAGVAGLSRSLARELGSR  176
            + +S++V+  M     G IV +SSV +  G +  G ++Y AAKAGV GL++++ARE+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NITVNCVAPGFIATDMTHAL-TEEQKAAMLASIPLARAGTPEDIAGAVGFLVSPAASYVT  235
            +I +N +APG+I TD+T +L  +E++ A++ +IPL+R G+++D+A A  FL S  +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GTTVHVNGGMFMD  248
            G T++VNGGM+++
Sbjct  280  GITLDVNGGMLIH  292

716) fabG in NC_017950


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  133 bits (487),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 169/252 (68%), Gaps = 11/252 (4%)

Query  1    MELTNKNVFVTGSS--RGIGLAIAHKFASLGANVVLNGRGQLGQDLL-DSFADYGVKVLA  57
            M L  K  ++TG++  RGIG A A  FA  GA VV+    +L++    D+ A  G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGHLG  100

Query  58   ISGDISIAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTEEDFDTVLKVNLTGTF  117
            ++++++   + K+ VA  IE +G +D+LVNNAGIT+   +L +   D+D VL V+L GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  NMTQAVLKPMTKAREGAIINLSSVSGLIGNA--GQANYSASKAGVIGFTKAIAREVAGRN  175
             M+QAV+  M     G+I+ +SSVS+  G +  G ++YSA+KAGV+G+ KA+ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  VRVNAIAPGFIQSDMT-DVLSDKIKEAMTAQIPMKRFGATEEVADVAVFLAKQ--EYLTG  232
            +R+N+IAPG+I++D+T +++ D  ++A+   IP+ R+GA+++VA+ A+FLA +   YLTG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  233  QVIAVDGGLTMQ  244
              + V+GG+ ++
Sbjct  281  ITLDVNGGMLIH  292

717) fabG-2 in NC_007517


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (484),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 107/249 (43%), Positives = 171/249 (69%), Gaps = 8/249 (3%)

Query  1    MSLEGKVAIVTGAS--RGIGRAIALKLAREGASVVVTATTLESARKTAAEIEALGHKals  58
            M L+GK+AI+TGA+  RGIGRA A+ +A++GA VV+      +AR +AA   +LG+  L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLG  100

Query  59   lavdvadssavEAMFVSAVGAFGKVDILVNNAGITKDGLLLRMKDADWDAVIDVNLKGAF  118
            LA +VAD S V     + +  FG++D+LVNNAGIT+    L ++ +D D V+DV+L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCIREAAKLMVKARSGRIVNISSVVGEMGNA--GQINYCASKAGMIGLTKSAARELAKRG  176
               +     M    SG IV +SSV ++ G +  G  +Y A+KAG++GL K+ ARE++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVTPGFIETNMTS-VLSDKVREGLLQQIPLERLGTSDDVANAVFFLVSSMGDYITG  235
            I +N+++PG+I+T++T+ ++ D  R+++++ IPL RLG+++DVANA +FL S ++ Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  HVLSVNGGM  244
              L VNGGM
Sbjct  281  ITLDVNGGM  289

718) fabG_1 in NC_017911


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 103/249 (42%), Positives = 165/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAVVIGTATSASGAERIAATLKENGVQGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LELNVTSDESVAAVLAEITAQFGAPAILVNNAGITRDNLMMRMKDDEWYDVVDTNLNSLF  118
            L  NV+ +  V   +A I  +FG   +LVNNAGIT+    + ++ ++   V+D +L + +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIINIGSVVGAMGNA--GQVNYASAKAGLEGFSRALAREVGSRS  176
             +S++V+  M     G I+ ++SV +  G +  G  +Y++AKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQREALLTQIPLGRLGQAQEIANVVTFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A++  IPLGRLG AQ++AN   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

719) fabG in NC_007492


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 104/250 (42%), Positives = 167/250 (67%), Gaps = 9/250 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAIVVGTATSASGAERIAATLKENGIQGAG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA VV      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   FELNVTSDESVTKVLASIQEQFGAPVAILVNNAGITRDNLMMRMKDDEWYDVIDTNLNSL  118
            +  NV+ +  V + +A+I E+FG  + +LVNNAGIT+    + ++ ++   V+D +L + 
Sbjct  101  LAANVADESQVKQAVATIIEHFG-RIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  YRLSKGVLRGMTKARWGRIISIGSVVGAMGNA--GQVNYAAAKAGLEGFSRAMAREVGSR  176
              +S++V+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+++AMARE G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  SITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQAQEIASVVAFLASDGAAYVT  235
             I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG AQ++A+   FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GATIPVNGGM  245
            G T+ VNGGM
Sbjct  280  GITLDVNGGM  289

720) fabG in NC_012660


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 165/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAVVIGTATSASGAERIAATLKENGVQGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LELNVTSDESVAAVLAEITAQFGAPAILVNNAGITRDNLMMRMKDDEWYDVVDTNLNSLF  118
            L  NV+ +  V   +A I  +FG   +LVNNAGIT+    + ++ ++   V+D +L + +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIINIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRS  176
             +S++V+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQREALLTQIPLGRLGQAQEIANVVTFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A++  IPLGRLG AQ++AN   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

721) Pnec_0407 in NC_010531


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 170/246 (70%), Gaps = 8/246 (3%)

Query  5    LSGQIALVTGAS--RGIGQAIADELVKCGAKVIGTATSESGAKAIDERLKASGGVGKVLN  62
            L G+IA++TGA+  RGIG+A A  + + GA+V+     ES+A+     L + G +G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGHLGLAAN  104

Query  63   VTASNACEEIIDLIVKEYGGINILVNNAGITRDNLAMRMKFEEWTDVIDTNLSSVFRLSQ  122
            V+  +   + +  I+ ++G I++LVNNAGIT+   ++ ++  +   V+D +L + + +SQ
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  123  AVMRPMMKARG-GRIINITSIVSHMGNP--GQTNYAAAKAGVSGMTRALAREIGSRNITV  179
            AV+ P M+A+G G I+ ++S+ ++ G    G  +Y+AAKAGV G+ +A+ARE+G+ +I +
Sbjct  165  AVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NCVAPGFIDTDMTRAL-SEEQQNALKVNIPLARLGSPEDVAQAVAFLASPAAGYITGNTL  238
            N +APG+I+TD+T +L  +E+++A+   IPL+RLG+++DVA+A  FLAS  ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGL  244
            +VNGG+
Sbjct  284  DVNGGM  289

722) THI_2930 in NC_014145


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (484),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 163/249 (66%), Gaps = 8/249 (3%)

Query  1    MRLQDHIALITGAA--QGIGLATARKFAAEGAHLVLCDRNPATLDPVADELRRGGAQVLA  58
            M LQ+ IA+ITGAA  +GIG ATA  FA +GA++V+ D + ++    A  L   G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   QALDVSDRAAFTTLVDAAIAQFGKIDTLVNNAGITRDARLVKMTDEQFDAVIDVNLRAVF  118
             A +V+D +     V + I +FG+ID LVNNAGIT+  + + +   ++D V+DV+LR+ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RCTQIVAPHMIERGRGAILSASSVVGLYGN--FGQTNYAATKAGIIAMTKTWARELGPKG  176
              +Q V P M  +G G+I+  SSV +  G   FG  +Y+A+KAG++++ K+ ARE+GP  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAVAPGFIQTPMLATI-PDKVMEQMAERVPLRRLGKAEEIASVYAFLASSEASYISG  235
            +R+N++APG+I+T + + +  D   + + E +PL RLG A+++A+   FLAS  +SY++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  AVIEVDGGM  244
              ++V+GGM
Sbjct  281  ITLDVNGGM  289

723) Tint_2531 in NC_014153


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (484),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 163/249 (66%), Gaps = 8/249 (3%)

Query  1    MRLQDHIALITGAA--QGIGLATARKFAAEGAHLVLCDRNPATLDPVADELRRGGAQVLA  58
            M LQ+ IA+ITGAA  +GIG ATA  FA +GA++V+ D + ++    A  L   G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   QALDVSDRAAFTALVDAAIAQFGKIDTLVNNAGITRDARLVKMTDEQFDAVIDVNLRAVF  118
             A +V+D +     V + I +FG+ID LVNNAGIT+  + + +   ++D V+DV+LR+ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RCTQIVAPHMIERGRGAILSASSVVGLYGN--FGQTNYAATKAGIIAMTKTWARELGPKG  176
              +Q V P M  +G G+I+  SSV +  G   FG  +Y+A+KAG++++ K+ ARE+GP  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VRVNAVAPGFIQTPMLATI-PDKVMEQMAERVPLRRLGKAEEIASVYAFLASSEASYISG  235
            +R+N++APG+I+T + + +  D   + + E +PL RLG A+++A+   FLAS  +SY++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  AVIEVDGGM  244
              ++V+GGM
Sbjct  281  ITLDVNGGM  289

724) Rmar_2450 in NC_013501


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 99/224 (45%), Positives = 149/224 (67%), Gaps = 8/224 (3%)

Query  28   FAREGAAVVVADRDGEVAGALADALQAEGARAWALSVDVTRPEQVEQMARETAEHFGRID  87
            FA++GA VV+ D D   A   A +L   G    +L+ +V+   QV Q      EHFGRID
Sbjct  70   FAQHGARVVILDLDESAARDAAATL---GEGHLGLAANVADESQVKQAVATIIEHFGRID  126

Query  88   ILVNNAGVTQDATLRKMTLEQFRAVLEVNLTGVFLCTKAVLPYMEAQGGGCILNASSVVA  147
            +LVNNAG+TQ      +   ++  VL+V+L G +L ++AV+P M AQG+G I+  SSV A
Sbjct  127  VLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSA  186

Query  148  H--AGNFGQTNYVAAKAGVIGMTKTWARELGRYGIRVNAVAPGFIETDMTRDV--PEKVL  203
            +  +G FG  +Y AAKAGV+G+ K+ ARE+G   IR+N++APG+I+TD+T ++   E+  
Sbjct  187  QRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRH  246

Query  204  DMVRARTPLGRMGRPEEVARAYLFLASDEASFITGAVLNVDGGL  247
             ++ +  PLGR+G +++VA A LFLASD +S++TG  L+V+GG+
Sbjct  247  AIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGM  289

725) BP1026B_I0876 in NC_017831


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 106/250 (43%), Positives = 176/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVigtatteagaegigaaFKQAGLEGRGAV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ ++ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKVLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L Q++ + A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

726) RHA1_ro05413 in NC_008268


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 163/248 (66%), Gaps = 4/248 (1%)

Query  5    LEGKVALITGAS--RGMGESHAKAFVEHGAKVVLADITDDAGELLAKELGENAVFVHHDV  62
            L+GK+A+ITGA+  RG+G + A +F +HGA+VV+ D+ + A+   A  LGE  + +  +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  63   TQLDSWTNVVERSVNAFGEINVLVNNAGVLGPLATTAELTEGDYRKVCSINQDGVFFGMK  122
            ++     + V   ++ FG I+VLVNNAG+  P+  T ++  GDY KV  ++  G ++  +
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPI-KTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  123  AVLPSMERAGIGSIVNISSIAGMAANYGFPSLAYVASKFAVRGMTKATAVEYGPKNIRVN  182
            AV+P+M   G GSIV +SS+++  +   F +  Y A+K +V G+ KA A E+GP +IR+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  183  SVHPGFIQTPMMVEATNEEGGDALAQ-IPLGRIADPQEVSNLVLFLASDESSYITGSEHL  241
            S+ PG+I+T +     ++E  +A+ + IPLGR++ +Q+V+N  LFLASD SSY+TG    
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  242  VDAGMLAQ  249
            V++GML +
Sbjct  285  VNGGMLIH  292

727) ROP_37110 in NC_012522


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  132 bits (486),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 105/253 (42%), Positives = 167/253 (67%), Gaps = 10/253 (3%)

Query  6    RTAVVTGATSERGIGLATARRYAEEGWAIVVLDLDGEKSAKAAAEIGNEFGVPAFGHDID  65
            + A++TGA+SERGIG ATA  +A++G  +V+LDLD   +  AAA +G+      +G   +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HLGLAAN  104

Query  66   VADEQSVQRahdavaaevaagnlpavGALANIAGITSPVPFLETTLELWNKVMAVNATGT  125
            VADE  V++A  ++  + +       + L N AGIT P+  L+      +KV+ V+  GT
Sbjct  105  VADESQVKQAVATIIEHFGRI-----DVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  126  YLVTRAFLPAMIDNGWGRVVNMSSVSAQRGGGVFGKVPYSSAKAAVLGFTKSLARELGDS  185
             L+++A +P+M  +G G +V MSSVSAQRGGG+FG   YS+AKA+VLG+ K++ARE+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  186  GVTVNAVTPGAVDTSIRVG-STAEQEAALCRDIPLGRvatttevaavITFLSSQDAAYLT  244
             + +N+++PG ++T I  G    E+  A+  +IPLGR++++ +VA    FL+S+ ++YLT
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  245  GTTVDINGGSHLH  257
            G T+D+NGG  +H
Sbjct  280  GITLDVNGGMLIH  292

728) RGE_42180 in NC_017075


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (481),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 157/248 (64%), Gaps = 12/248 (4%)

Query  1    MRLKDKVCIVTGAA--QGIGAATVAKFAAEGavvvacdrradavPGAAESL-------AV  51
            M L++K+ I+TGAA  +GIG AT   FA +GA VV  D    A  +AA +L       A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  52   DVTVRAQVDAMVAAVKAKYGRIDVLVNNAGITRDARLVKMSEEQFDAVIDVNLRGVFHCA  111
            +V+  +QV   VA++   +GRIDVLVNNAGIT+  + + +   ++D V+DV+LRG +  +
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  112  QAVAPIMIEQGSGVILNASSVVGIYGN--FGQTNYAASKFGVIGFTKTWSRELGPKGVRV  169
            QAV P M  QGSG I+  SSV +  G   FG  +Y+A+K GV+G+ K+ +RE+GP  +R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  170  NAVAPGFVATPILETIPAKVLEH-MREQVPLQRLGRPEEIAAVYAFLASDEASYVNGAVL  228
            N++APG++ T I   +      H + E +PL RLG ++++A    FLASD +SY+ G  L
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  229  EVSGGMTV  236
            +V+GGM +
Sbjct  284  DVNGGMLI  291

729) fabG in NC_007651


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 105/250 (42%), Positives = 177/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGATVIGTATTEAGAEGISAAFKEAGLEGRGav  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A + +A++ E+ L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaavdalvEATLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTK-VLPEDQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  ++ ++++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

730) Franean1_3710 in NC_009921


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 106/256 (42%), Positives = 169/256 (67%), Gaps = 23/256 (8%)

Query  1    MRLKDKVAVITGAGS--GIGKAIAHRFAAEGASVVCASVSGRAV-DVAAEIGDGALGVKA  57
            M L++K+A+ITGA+S  GIG+A A  FA +GA VV   +   A  D AA +G+G LG+ A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  58   DVSDEADVRRMIGAAEEAFGRIDILVNNAGFGGKLKPIHEQSTEDWDRVHGVNLRGVFFC  117
            +V+DE++V++ +++  E FGRID+LVNNAG+   +K + +    D D+V +V+LRG ++ 
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTL-DIRPGDYDKVLDVSLRGTLLM  162

Query  118  MKYGIMSMRRTGGGSVVNVSSTTA-----VIGWKHHGIYGAAKAGVNQLTRVAALDYADD  172
             +  I +MR  G+GS+V +SS +A     ++G  H   Y+AAKAGV  L +  A +++ D
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPH---YSAAKAGVLGLGKAMAREFGPD  219

Query  173  NIRVNAVCPGTIWT----GLVQLSKEHPEPPPGVFRLPGIPMDRWGLSDEIAAATLFLAS  228
            +IR+N++ PG I T    GL+Q  + H+        + GIP++R G ++++A A+LFLAS
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAI-------IEGIPLGRLGAAQDVANAALFLAS  272

Query  229  DEASYVTGVLMPVDGG  244
            D +SY+TG+ + V+GG
Sbjct  273  DLSSYLTGITLDVNGG  288

731) fabG in NC_018690


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 166/247 (68%), Gaps = 6/247 (2%)

Query  1    MQGKIALVTGAT--RGIGKAIAEELAAKGATVIGTATSEKGAESISAYLGDKGKGLVLNV  58
            +QGKIA++TGA+  RGIG+A A  +A  GA V+     E +A   +A LG+   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   TDADSIEAVLAQIKADFGDVDILVNNAGITRDGLLMRMKEDDWFDIIQTNLTSVYRLSKA  118
            +D   +   +A I  +FG +D+LVNNAGIT+    + ++ +D   +++ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VLRPMMKKG-GRIITIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNV  175
            V+  M  +G G I+ ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  176  VAPGFIATDMTDEL-NEDQKQAILSQIPAGQLGSAQDIAKAVAFLASDDAKYITGETIHV  234
            +APG+I TD+T+ L ++++++AI+  IP G+LG+AQD+A+A  FLASD + Y+TG T++V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  235  NGGLYMN  241
            NGG+ ++
Sbjct  286  NGGMLIH  292

732) D7S_01186 in NC_017846


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (481),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 163/246 (67%), Gaps = 5/246 (2%)

Query  1    MQGKIALVTGAT--RGIGRAVAEELASKGAFVIGTATSEKGAETISAYLGEKGRGLVLNV  58
            +QGKIA++TGA+  RGIGRA A  +A  GA V+     E +A   +A LGE   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   ADQASIEGVLERIKKEFGDIDILVNNAGITRDNLLMRMKDEEWFDILQTNLSSVYHLSKA  118
            AD++ +   +  I  +FG ID+LVNNAGIT+    + ++  +   +L+ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  MLRSMMKKRFGRIINIGSVVGSSGNP--GQSNYCAAKAGLVGFSKALAKEVASRGITVNV  176
            ++ +M  +  G I+ ++SV +  G    G ++Y AAKAG++G++KA+A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  177  VAPGFIATDMT-EVLSEELKNNLLTQIPAGRLGEPKDIAKAVAFLASDDAAYINGITLHV  235
            +APG+I TD+T  ++ +E ++ ++  IP GRLG ++D+A+A  FLASD ++Y+ GITL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  236  NGGMYM  241
            NGGM +
Sbjct  286  NGGMLI  291

733) fabG in NC_020209


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 102/249 (41%), Positives = 165/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAVVIGTATSAAGAERIAATLKENGVQGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      ++A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LELNVTSDESVAAVLTEITAQFGAPAILVNNAGITRDNLVMRMKDDEWYDVVDTNLNSLF  118
            L  NV+ +  V   ++ I  +FG   +LVNNAGIT+    + ++ ++   V+D +L + +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIINIGSVVGAMGNA--GQVNYASAKAGLEGFSRALAREVGSRA  176
             +S++V+  M     G I+ ++SV +  G +  G  +Y++AKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PDVQREALLAQIPLGRLGQAQEIANVVTFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  D +R+A++  IPLGRLG AQ++AN   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

734) RB2501_15174 in NC_013222


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (481),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 175/252 (70%), Gaps = 9/252 (3%)

Query  1    MKILEGKKAIITGAS--RGIGSGIAEVFAREGADVAFTYSSSDGPAKELENKLSGMGVKA  58
            + +L+GK AIITGA+  RGIG + A  FA++GA V +     +++A++    L+   +  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATLGEGHLGL  101

Query  59   RAYKSDASSFeaaeelvarvleDFGGVDILVNNAGITKDNLLMRMSEEDFDKVIEINLKS  118
             A  +D S      + VA ++E+FG +D+LVNNAGIT+    + +   D+DKV++++L++
Sbjct  102  AANVADESQ---VKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFNMTKAIQRTFLKQRGGSIINMSSVVGVKGNA--GQANYAASKAGMIGFTKSVALELGS  176
             + M++A+  T   Q +GSI+ MSSV + +G +  G ++Y+A+KAG++G+ K++A E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RNIRCNAIAPGFIETEMTEKL-DEKTVQGWRDAIPLKRGGTPEDVANACLYLASDLSAYV  235
             +IR N+IAPG+I+T++T  L ++   ++  ++IPL R G+++DVANA L+LASDLS+Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVLHVDGGML  247
            TG  L+V+GGML
Sbjct  279  TGITLDVNGGML  290

735) VEJY3_17321 in NC_016614


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 168/248 (68%), Gaps = 14/248 (5%)

Query  3    HDKVAIVTGAA--RGIGRAICEQLLEDGFYVIGLDIS-PVEWSQSSQLTSYQVNLC----  55
            ++K+AI+TGAA  RGIGRA    + ++G  V+ LD+  +  +  ++ L   ++ L     
Sbjct  47   QGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVA  106

Query  56   DSKGVNEVVESIIQQHHRIDVLVNNAGITRDALLQDMLEKDWDSVIDVNLKAVFLLTQSV  115
            D   V++ V +II++  RIDVLVNNAGIT+     D+   D D V+DV+L++ +L++Q+V
Sbjct  107  DESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAV  166

Query  116  APVMLNQGTGSIVNISSIVGTDGN--IGQSNYAASKGGVISMSKGWAKELARKGAQIRVN  173
             P M  QG+GSIV +SS+ +  G   +G ++Y+A+K+GV++++K+ A+E++    QIR+N
Sbjct  167  IPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD--QIRIN  224

Query  174  CVAPGFIVTDMTKDL--PEKVIKMMEGKTPLGRMGSVRDIANGVAFLASDKSEFITGQVL  231
             +APG+I TD+T +L   E+   ++EG  PLGR+G+ +D+AN+  FLASD S ++TG  L
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  232  KIDGGLVL  239
             ++GG+++
Sbjct  284  DVNGGMLI  291

736) fabG in NC_021173


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (480),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 106/250 (43%), Positives = 176/250 (71%), Gaps = 10/250 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARRGAMVIGTATTEAGAESISAAFKEAGIEGRGal  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A   +A++ E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaavdalvEATLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRL  122
             NV D + V   V + + +FG ++VLVNNAGITQ   ++ ++ ++ D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIVNITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G IV ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKALPQEQQ-AALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T +L Q+++  A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGMFM  248
            TL+VNGGM++
Sbjct  282  TLDVNGGMLI  291

737) GM18_3077 in NC_014973


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (480),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 105/249 (43%), Positives = 167/249 (68%), Gaps = 8/249 (3%)

Query  1    MSLNGQVAIVTGAS--RGIGRAIAVKLaaqgaavvvtattekgaaRTAEEIVAAGGRSLA  58
            M L+G++AI+TGA+  RGIGRA AV +A +GA VV+    E +A R A   ++ G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAA-RDAAATLGEG--HLG  100

Query  59   VKVDVSVAAEVEGLFKQAVEAFGKVDILVNNAGITKDGLLLRMKEEDWDAVLDVNLKGSF  118
            +  +V+  ++V       +E FG++D+LVNNAGIT+    L ++  D D VLDV+L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCTREAAKLMSKARYGRIVNVSSVVGEMGNP--GQANYCASKAGMIGLTKSVARELAKRN  176
              ++     M     G IV +SSV ++ G    G ++Y A+KAG++GL K++ARE++  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  VTVNAVTPGFIETDMTAEL-SEKTREALQEQIPMGRLGSADDIAGAVLFLVSDAAAYITG  235
            + +N+++PG+I+TD+T+ L  +  R+A+ E IP+GRLG+A+D+A A LFL SD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  HVLSVNGGM  244
              L VNGGM
Sbjct  281  ITLDVNGGM  289

738) fabG in NC_017515


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LNGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGSEGRVLN  63
            L+GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETIESLIADIEKAFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   +   +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

739) fabG in NC_012658


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (480),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 166/252 (66%), Gaps = 13/252 (5%)

Query  4    LEGKTAIVTGAS--RGIGRAIAKKLASMGANLV-LNY-RSSAKEIDTLLEEIKEFGIETL  59
            L+GK AI+TGA+  RGIGRA A  +A  GA +V L+   S+A++  + L E        L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE------GHL  99

Query  60   VIQGDVSSFEDSKKIVDEAKNKFGTIDILINNAGITKDSLILRMTEEDFDKVISVNLKGV  119
             + ++V+   + K+ V    + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  YNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGSR  177
               S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GITVNAVAPGYIKTDMTDAL-PEKVKKSIEDLLPLKRLGAPEDVAETVGFLASDKAAYIT  236
             I +N++APG I TD+T++L  +  + +I + +PL RLGA++DVA++  FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIHVDGGMII  248
            G  ++V+GGM+I
Sbjct  280  GITLDVNGGMLI  291

740) fabG in NC_013971


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (480),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 177/246 (72%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLAARGAKVVGTATSQSGADAISSYLGDSGKGLLL  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+VV     +S+A   ++ LG++  GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDATSITNVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + + + +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KSVMRAMMKKRAGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            ++V+ +M  + +G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SEEQRAGILAEVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

741) fabG in NC_013961


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (480),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 177/246 (72%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLAARGAKVVGTATSQSGADAISSYLGDSGKGLLL  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+VV     +S+A   ++ LG++  GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDATSITNVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + + + +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KSVMRAMMKKRAGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            ++V+ +M  + +G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SEEQRAGILAEVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

742) Gbro_4223 in NC_013441


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (480),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 106/253 (42%), Positives = 167/253 (67%), Gaps = 10/253 (3%)

Query  6    RTAVITGATSPRGIGREVARRYAEEGWAIVILDLDGELSAKVAAEIGNQYAVPAFGADID  65
            + A+ITGA+S RGIGR  A  +A++G  +VILDLD   +   AA +G+      +G   +
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----LGLAAN  104

Query  66   VTDeasvaaaqaavaaevasGNLPVVGALANIAGITSPVPFLETTLDLWNKVMAVNATGT  125
            V+DE+ V  A A++       ++  ++ L N AGIT P+  L+   +  +KV+ V+  GT
Sbjct  105  VADESQVKQAVATII-----EHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  126  YLVTKAFLPAMIDAGFGRIVNMSSVSAQRGGGVFGKVPYSSAKAAILGFTKSLARELGTT  185
             L+++A +P+M   G G IV MSSVSAQRGGG+FG   YS+AKA++LG+ K++ARE+G  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  186  GVTVNAVTPGAVDTDIRVG-STDEQEAALAASIPVartatttevaaaitFLSSEDAAYLT  244
             + +N+++PG ++TDI  G   DE+  A+  +IP++R +++ +VA A  FL+S+ ++YLT
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  245  GTTLDINGGSHMH  257
            G TLD+NGG  +H
Sbjct  280  GITLDVNGGMLIH  292

743) Psest_1688 in NC_019936


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (480),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 167/249 (68%), Gaps = 8/249 (3%)

Query  1    MNLQGKVALVTGAS--RGIGQAIALELGRQGAIVIGTATTSSGAERIAETLKENGIEGAG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   A TL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LVLDVGNDESVSSTLEHIQQHLGQPAILVNNAGITRDNLMLRMKDDEWHDVINTNLSSLY  118
            L  +V+++  V  ++  I +H+G+  +LVNNAGIT+    L ++ ++ + V++ +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKAVLRGMTKARWGRIINIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRG  176
             +S+AV+  M     G I+ ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQRDALLGQIPLGRLGQAEEIAKVVAFLASDGAAYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A++  IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

744) Pcryo_0516 in NC_007969


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 100/244 (41%), Positives = 162/244 (67%), Gaps = 8/244 (3%)

Query  5    ITLVTGAS--RGIGKAVAKRFAKEGHFVIGTATTEKGAAQIDDYLNDSGGIGRVLDVRDT  62
            I+++TGA+  RGIG+A A  FA++G  V+     E +A +    L + G +G   +V D 
Sbjct  50   IAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAANVADE  108

Query  63   AQIDKLFEEIESVYGAVQVLVNNAGITQDGLLMRMKDEDWDNVIDTNLTSVYRMSKRAIR  122
            +Q+ +    I   +G ++VLVNNAGITQ    + ++  D D+V+D +L +   MS+  I 
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  123  GMMKARRGRIINITSVVAQMGNA--GQSNYAATKAGVEGFSRTLAREIGSRQVTINCVAP  180
             M     G I+ ++SV AQ G +  G ++Y+A+KAGV G+++++ARE+G+ Q+ IN +AP
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAP  228

Query  181  GLIETDMTDEL--DERLLNSMLDAVPISRLGQPEDIAAAVLFLASDEASYITGAVLPVNG  238
            GLI+TD+T+ L  DER  +++++++P++RLG ++D+A A LFLASD +SY+TG  L VNG
Sbjct  229  GLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  239  GMYM  242
            GM +
Sbjct  288  GMLI  291

745) fabG in NC_021661


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 100/244 (41%), Positives = 162/244 (67%), Gaps = 8/244 (3%)

Query  5    ITLVTGAS--RGIGKAVAKRFAKEGHFVIGTATTEKGAAQIDDYLNDSGGIGRVLDVRDT  62
            I+++TGA+  RGIG+A A  FA++G  V+     E +A +    L + G +G   +V D 
Sbjct  50   IAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAANVADE  108

Query  63   AQIDKLFEEIESVYGAVQVLVNNAGITQDGLLMRMKDEDWDNVIDTNLTSVYRMSKRAIR  122
            +Q+ +    I   +G ++VLVNNAGITQ    + ++  D D+V+D +L +   MS+  I 
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  123  GMMKARRGRIINITSVVAQMGNA--GQSNYAATKAGVEGFSRTLAREIGSRQVTINCVAP  180
             M     G I+ ++SV AQ G +  G ++Y+A+KAGV G+++++ARE+G+ Q+ IN +AP
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAP  228

Query  181  GLIETDMTDEL--DERLLNSMLDAVPISRLGQPEDIAAAVLFLASDEASYITGAVLPVNG  238
            GLI+TD+T+ L  DER  +++++++P++RLG ++D+A A LFLASD +SY+TG  L VNG
Sbjct  229  GLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  239  GMYM  242
            GM +
Sbjct  288  GMLI  291

746) NMBB_2191 in NC_017505


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  131 bits (479),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 107/247 (44%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  40   LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  97
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  98   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  157
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  158  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  215
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  216  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  274
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  275  VNGGMLM  281
            VNGGML+
Sbjct  285  VNGGMLI  291

747) fabG in NC_014752


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 107/247 (44%), Positives = 169/247 (69%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISGRLAQWGGEGRALD  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   ++ L++ G  G A +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETIESLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   +   +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFAKSMAREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQAFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+A+    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

748) fabG in NC_017512


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 107/247 (44%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRALD  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G A +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETIESLIADIEKAFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   +   +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFAKSMAREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQAFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+A+    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

749) fabG in NC_003116


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 107/247 (44%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRALD  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G A +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETIESLIADIEKAFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   +   +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFAKSMAREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQAFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+A+    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

750) Rhom172_2450 in NC_015966


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 98/224 (44%), Positives = 149/224 (67%), Gaps = 8/224 (3%)

Query  16   FAREGAAVMVADRDGEVAKALADALQAEGARARALSVDVTRPEQVEQMARETAEHFGRID  75
            FA++GA V++ D D   A+  A +L   G    +L+ +V+   QV Q      EHFGRID
Sbjct  70   FAQHGARVVILDLDESAARDAAATL---GEGHLGLAANVADESQVKQAVATIIEHFGRID  126

Query  76   ILVNNAGITRDATLRKMTLEQFRAVLEVNLTGVFLCTKAVLPYMEAQGGGCILNASSVVA  135
            +LVNNAGIT+      +   ++  VL+V+L G +L ++AV+P M AQG+G I+  SSV A
Sbjct  127  VLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSA  186

Query  136  H--AGNFGQTNYVAAKAGVIGMTKTWARELGRYGIRVNAVAPGFIETDMTQRV--PEKVL  191
            +  +G FG  +Y AAKAGV+G+ K+ ARE+G   IR+N++APG+I+TD+T  +   E+  
Sbjct  187  QRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRH  246

Query  192  DMVRARTPLGRMGRPEEVARAYLFLASDEASFITGAVLNVDGGL  235
             ++ +  PLGR+G +++VA A LFLASD +S++TG  L+V+GG+
Sbjct  247  AIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGM  289

751) GM21_1156 in NC_012918


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 107/253 (43%), Positives = 167/253 (67%), Gaps = 16/253 (6%)

Query  1    MSLNGQVAIVTGAS--RGIGRAVALKLAQQGaavvvtattKEGAARTADEITAAGGRALA  58
            M L+G++AI+TGA+  RGIGRA A+ +AQ+GA VV+     E+AAR A    + G  +LA
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL-DESAARDAAATLGEGHLGLA  102

Query  59   vkvdvsvvsevevLFKEAVAA----FGKVDILVNNAGITKDGLLLRMKEDDWDAVLDVNL  114
             +V            K+AVA+    FG++D+LVNNAGIT+    L ++ +D D VLDV+L
Sbjct  103  ANVADESQV------KQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  115  KGCFNCTREAAKLMSKSRYGRIVNVSSVVGEMGNP--GQANYCASKAGMIGLTKSVAREL  172
            +G +  ++     M     G IV +SSV ++ G    G ++Y A+KAG++GL K++ARE+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  173  ARRNVTVNAVTPGFIETDMTNEL-SEKTRESLQEQIPMGRLGSADDISGAVLFLVSDAAA  231
            +  ++ +N+++PG+I+TD+T  L  +  R+++ E IP+GRLG+A+D++ A LFL SD ++
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  232  YITGHVLSVNGGM  244
            Y+TG  L VNGGM
Sbjct  277  YLTGITLDVNGGM  289

752) Shal_2747 in NC_010334


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 108/255 (43%), Positives = 167/255 (66%), Gaps = 19/255 (7%)

Query  1    MLNNKICIVTGGA--QGIGRCIVETFAQQGALKVYACDMNIEAMRD----LEEQYSNVSA  54
            +L+ KI I+TG+A  +GIGR    TFAQ+GA +V   D++  A RD    L E    ++A
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGA-RVVILDLDESAARDAAATLGEGHLGLAA  103

Query  55   KELNVCDRKGIQALIETLKAEHGKIDVLVNNAGITRD-NLLDRMSEDDWDMVINVNLKGV  113
               NV D   ++  + T+  + G+IDVLVNNAGIT+  + LD +  +D D V++V+L+G 
Sbjct  104  ---NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD-IRPGDYDKVLDVSLRGT  159

Query  114  FNMTQAVAPLMIENGVGSIITMSSVVGTDGNV--GQTNYAATKGGVITMTKGWAKEFSRK  171
            + M+QAV P M  +G GSI+ MSSV +  G    G  +Y+A+K+GV+ + K+ A+EF+  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  172  GAQVRANCVAPGFIETPMTIEL--PEKVLNFMKGKTPLGRMGKPEDIANGVLFLASDNSN  229
              Q+R N +APG+I+T +T  L   E+   ++ G  PLGR+G ++D+AN+ LFLASD S+
Sbjct  220  --QIRINSIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSS  276

Query  230  FITGQTLKIDGGLVI  244
            ++TG TL ++GG++I
Sbjct  277  YLTGITLDVNGGMLI  291

753) fabG in NC_008260


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 164/242 (68%), Gaps = 5/242 (2%)

Query  5    KVALVTGAS--RGIGRAIAEQLIANGFFVVGTATTDKGAAAIGDALGENGAGKRLDVADK  62
            K+A++TGA+  RGIGRA A  +  +G  VV     + +A   + +LGE   G   +VAD 
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  63   TSVDATLKSINEEFGAPLVLVNNAGITRDNIMLRMKEDEWDDVINTNLNSLYRVSKACLK  122
            + V  ++ +I E+FG   VLVNNAGIT+    L ++ ++ D V++ +L +   +S+A + 
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  123  GMTKARWGRIINISSVVGTMGNA--GQANYAAAKGGVEGFSRALARELGSRNITVNSVAP  180
             M     G I+ +SSV +  G +  G ++Y+AAK+GV G+++A+ARE+G+ +I +NS+AP
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAP  228

Query  181  GFIQTDMTEAL-PEAQKEALLQGIPLGRLGQPAEIASAVAWLASEGGGYVTGTTLHVNGG  239
            G+I+TD+T +L  + +++A+++GIPLGRLG + ++A+A   LAS+ ++Y+TG TL+VNGG
Sbjct  229  GLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGG  288

Query  240  MF  241
            M+
Sbjct  289  ML  290

754) Btus_0471 in NC_014098


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 168/252 (67%), Gaps = 11/252 (4%)

Query  1    MRVKDKVVVITGGA--RGIGKATAEKFLEEGARVVFCDRDAEAGRETLEELRSLGPVSFY  58
            M +++K+ +ITG+A  RGIG+ATA  F ++GARVV+ D D  A+R++   L + G +++ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGHLGL-  101

Query  59   PVDVTAEEDILDFIGKVVEVHDRVDVLINNAGITMDGLLTKLAEEAWHKVLAVNLTGVFL  118
            + +V+ E ++ + ++ ++E  +R+DVL+NNAGIT       +     +KVL V+L G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CTKAVAPFMIERGRGVILNASSVVGLYGN--FGQTNYAATKAGVIGLTRTWAKELGPKGI  176
             ++AV P M  +G G I+  SSV +  G   FG  +Y+A+KAGV+GL ++ A+E+GP  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  177  RVNAVAPGFIATDMTAKVPEKILERMR---EQTPLRTLGRPEDIASAYLFLASDEARYIN  233
            R+N++APG+I TD+T+ + +   ER +   E  PL  LG ++D+A+A LFLASD + Y+ 
Sbjct  222  RINSIAPGLIHTDITGGLMQD--ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  234  GAVLSVDGGLVL  245
            G  L V+GG+++
Sbjct  280  GITLDVNGGMLI  291

755) fabG in NC_007204


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 100/244 (41%), Positives = 162/244 (67%), Gaps = 8/244 (3%)

Query  5    ITLVTGAS--RGIGKAIAKRFAKEGHFVIGTATTEKGAAQIDEYLNDSGGIGRVLDVRDT  62
            I+++TGA+  RGIG+A A  FA++G  V+     E +A +    L + G +G   +V D 
Sbjct  50   IAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAANVADE  108

Query  63   AQIDKLFEEIESVYGAVQVLVNNAGITQDGLLMRMKDEDWDNVIDTNLTSVYRMSKRAIR  122
            +Q+ +    I   +G ++VLVNNAGITQ    + ++  D D+V+D +L +   MS+  I 
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  123  GMMKARRGRIINITSVIAQMGNA--GQSNYAATKAGVEGFSRTLAREIGSRQVTINCVAP  180
             M     G I+ ++SV AQ G +  G ++Y+A+KAGV G+++++ARE+G+ Q+ IN +AP
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAP  228

Query  181  GLIETDMTDEL--DERLLNSMLDAVPISRLGQPEDIAAAVLFLASDEASYITGAVLPVNG  238
            GLI+TD+T+ L  DER  +++++++P++RLG ++D+A A LFLASD +SY+TG  L VNG
Sbjct  229  GLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  239  GMYM  242
            GM +
Sbjct  288  GMLI  291

756) Turpa_2755 in NC_018020


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 169/247 (69%), Gaps = 9/247 (3%)

Query  8    LKDAVVIVTGSG--RGIGRGIAEQFAAQGSKLVitdidaataeqtaqeiaKMGVETISMA  65
            L++ + I+TG++  RGIGR+ A  FA +G+++VI D+D ++A ++A     +G   +++A
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLGLA  102

Query  66   CDVSKYDQAEALANKAVEKWGKIDVLVNNAGITMDGLFLRMKPDQWQKVIDINLTGTYNC  125
             +V+   Q        +E  G+IDVLVNNAGIT     L ++P++ +KV+D++L GT   
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  126  AHAAVNHMRKARKGAIVNISSIAA---GGNPGQANYSASKAGVLGFTYALGKELAPMGIR  182
            ++A +  MR    G+IV +SS++A   GG  G ++YSA+KAGVLG+  A+++E++P  IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  183  VNAVAPGFIKTPMTDKI-PEKLREQMIAAIPLKRPGEPDDIAKVILFLASDLSAYVTAQC  241
            +N++APG+I T +T+ +  +  R+ +I +IPL R G ++D+A+  LFLASDLS+Y+T+  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  242  IHVNGGL  248
            ++VNGG+
Sbjct  283  LDVNGGM  289

757) fabG in NC_010120


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (477),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 107/247 (44%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

758) fabG in NC_013016


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  40   LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  97
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  98   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  157
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  158  AVLRGMMKQRAGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  215
            AV+  M  Q +G I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  216  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  274
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  275  VNGGMLM  281
            VNGGML+
Sbjct  285  VNGGMLI  291

759) fabG in NC_017390


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 175/246 (72%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVVGTATSQSGADAISSYLGDNGKGLLL  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+VV     +S+A   ++ LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDATSITNVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + + + +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KSVMRAMMKKRAGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            ++V+ +M  + +G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SEEQRAGILAEVPAGRLGSAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

760) fabG in NC_012214


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 175/246 (72%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVVGTATSQSGADAISSYLGDNGKGLLL  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+VV     +S+A   ++ LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDATSITNVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + + + +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KSVMRAMMKKRAGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            ++V+ +M  + +G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SEEQRAGILAEVPAGRLGSAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

761) fabG in NC_003295


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (477),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 103/248 (42%), Positives = 174/248 (71%), Gaps = 10/248 (4%)

Query  5    LNNQVALVTGAS--RGIGRAIALELARQGATVVGTATSEAGAQAISAYFAEAGVKGAGVV  62
            L+ ++A++TGA+  RGIGRA A+ +A++GA VV     E++A+  +A ++E+ +   G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAARCEAVIDEAIKTHGGLNILVNNAGITQDNLAMRMKDDEWMAVIDTNLSAVFRL  122
             NV D ++    +   I   G +++LVNNAGITQ   ++ ++ ++   V+D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQANYAAAKAGVEGMARAMAKEIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G ++Y+AAKAGV G+++AMA+E+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNSVAPGFIDTDMTK-VLSDEQHTALKAQIPLGRLGMPEDIANAVAFLASPAAGYITGA  238
             +NS+APG+I+TD+T  ++ DE++ A+   IPLGRLG ++D+ANA  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

762) fabG in NC_012913


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (477),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 98/244 (41%), Positives = 162/244 (67%), Gaps = 5/244 (2%)

Query  1    MQGKIALVTGAT--RGIGRAVAEELALKGAFVIGTATSEKGAESISAYLGEEGRGLVLNV  58
            +QGKIA++TGA+  RGIGRA A  +A  GA V+     E +A   +A LGE   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   ADQASIEGVLERIKKEFGDIDILVNNAGITRDNLLMRMKDEEWFDILQTNLSSVYHLSKA  118
            AD++ +   +  I  +FG ID+LVNNAGIT+    + ++  +   +L+ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  MLRSMMKKRFGRIINIGSVVGSSGNP--GQSNYCAAKAGLIGFSKALAKEVASRGITVNV  176
            ++ +M  +  G I+ ++SV +  G    G ++Y AAKAG++G++KA+A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  177  VAPGFVATDMT-EVLSEELKNTLLSQIPAGRLGEPKDIAKAVAFLASDDAAYINGTTLHV  235
            +APG++ TD+T  ++ +E +++++  IP GRLG ++D+A+A  FLASD ++Y+ G TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  236  NGGM  239
            NGGM
Sbjct  286  NGGM  289

763) fabG in NC_017501


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRAGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  181
            AV+  M  Q +G I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

764) fabG in NC_008767


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRAGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  181
            AV+  M  Q +G I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

765) fabG in NC_017513


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRAGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  181
            AV+  M  Q +G I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

766) fabG in NC_017516


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LNGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L+GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETIESLIADIEKAFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   +   +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

767) fabG in NC_017517


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRAGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  181
            AV+  M  Q +G I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

768) fabG in NC_003112


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 6/247 (2%)

Query  6    LNGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L+GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETIESLIADIEKAFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   +   +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMAREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+MARE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

769) KTR9_1440 in NC_018581


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 166/249 (67%), Gaps = 7/249 (2%)

Query  9    LLEGRTAVVTGGA--QGIGFEIARSFVEAGARVVlgdlgldaaqaaadelggSEvaravr  66
            LL+G+ A++TG+A  +GIG   A +F + GARVV+ DL+  AA+ AA  L  +E   ++ 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL--GEGHLGLA  102

Query  67   cdvvdaGEVDALLATAVEVFGSLDVVVNNAGITRDATMRTMTEEDFDQVISVHLKGTWNG  126
             +V D ++V   +AT +E FG +DV+VNNAGIT+      +   D+D+V+ V L+GT   
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  127  TRKAAAIMREAKRGAIVNISSLSGK--VGMVGQTNYSAAKAGIVGLTKAAAKEMAHHGVR  184
            ++   + MR    G+IV +SS+S++   G+ G  +YSAAKAG++GL KA A+E + + +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  185  VNAIQPGLIRSAMTEAMPQKAWDQKMAE-IPMRRVGEVGEVASVALFLASDMSSYMTGTV  243
            +N+I PGLI++ +T ++ Q  + + + E IP+ R+G   +VA+ ALFLASD+SSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  244  LEVTGGRFM  252
            L+V GG ++
Sbjct  283  LDVNGGMLI  291

770) TRQ2_1110 in NC_010483


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 107/255 (42%), Positives = 174/255 (69%), Gaps = 16/255 (6%)

Query  1    MRLEGKVCLITGAAS--GIGKATTLLFAQEGATVI----AGDISKENLDSLVKEAEGLPG  54
            M L+GK+ +ITGAAS  GIG+AT++ FAQ+GA V+        +++   +L     GL++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  55   KVDPYVLNVTDRDQIkevvekvvQKYGRIDVLVNNAGITRDALLVRMKEEDWDAVINVNL  114
                   NV+D  Q+K+ V  +++ +GRIDVLVNNAGIT+    + ++  D D V++V+L
Sbjct  104  -------NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  115  KGVFNVTQMVVPYMIKQRngsivnvssvvgiygnP--GQTNYAASKAGVIGMTKTWAKEL  172
            +G + ++Q V+P M  Q +GSIV +SSV +  G    G  +Y+A+KAGV+G+ K+ A+E+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  173  AGRNIRVNAVAPGFIETPMTEKL-PEKAREAALSRIPLGRFGKPEEVAQVILFLASDESS  231
            +  +IR+N++APG+I+T +T  L  +  R+A +  IPLGR+G +++VA+  LFLASD SS
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  232  YVTGQVIGIDGGLVI  246
            Y+TG  ++++GG++I
Sbjct  277  YLTGITLDVNGGMLI  291

771) NAL212_0670 in NC_015222


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 171/252 (68%), Gaps = 8/252 (3%)

Query  5    MILENKIALVTGAS--RGIGQAIALKLGQLGARVVGTATTESGVAGINQYLERAGIQGSG  62
            M+L+ KIA++TGA+  RGIG+A A+ ++Q GARVV     ES+  +    L  + +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  63   VILNVNDAEQINQVIKIIREKFGEVEILVNNAGITRDNLLVRMKDEEWDEIMETDLKSVF  122
            +  NV D  Q++Q +  I E FG +++LVNNAGIT+    + ++  + D +++  L++ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  123  RLSRAVLRAMMKARYGRIINISSVVGAMGNT--GQANYAAAKAGIFGFSKSLAREVGSRN  180
             +S+AV+ +M     G I+ +SSV +  G    G ++Y+AAKAG++G++K++ARE G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  181  ITVNCVAPGFIDTDMTRSL-ADEFQQNLIQHVPLGRLGRPEEvasavaflassaaGYVTG  239
            I +N +APG+I+TD+T +L  DE ++ +I+ +PLGRLG +++VA+A  FLAS  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  240  TILHVNGGMYMD  251
              L+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

772) Oweho_0697 in NC_016599


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 177/252 (71%), Gaps = 9/252 (3%)

Query  1    MKLLQGKTAIITGAS--KGIGKGIAEVFADNGANVAFTYLSSVEAAEAFEKELSSKGVKV  58
            + LLQGK AIITGA+  +GIG++ A  FA++GA V +  L    A +A    L+   + +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDA-AATLGEGHLGL  101

Query  59   KGYRSDASVYASAEELVNSVLEDFGSIDIVINNAGVTRDNLLMRMTEEDFDKVVQINLKS  118
             +  +D S      + V +++E+FG ID+++NNAG+T+    + +   D+DKV++++L++
Sbjct  102  AANVADES---QVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFNLTKTVQRTMLKQRsgsiinissvvgvkgNA--GQSNYAASKAGIIGFTKSIALELGS  176
             + ++++V  TM  Q SGSI+ +SSV + +G +  G ++Y+A+KAG++G+ K++A E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RNIRCNAIAPGFIETEMTGKL-DEKTVQGWRDAIPLKRGGTPEDVANACLFLASDLSAYV  235
             +IR N+IAPG+I+T++TG L ++   ++  ++IPL R G+++DVANA LFLASDLS+Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVMNVDGGML  247
            TG  ++V+GGML
Sbjct  279  TGITLDVNGGML  290

773) Sros_7515 in NC_013595


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 167/247 (68%), Gaps = 9/247 (3%)

Query  5    GRVVLVTGAAS--GIGRAVAQAFAEAGDRVVVADLDGTAAGRVAAELGA--LALPLDVTD  60
            G++ ++TGAAS  GIGRA A +FA+ G RVV+ DLD +AA   AA LG   L+L+ +V+D
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  61   PEAVAAGLERVAGELGPVEVLVNNAGIVAGGGSLVDLPIEIFDRVVAVNLRGTFTVTKVA  120
               V  ++  +  ++G ++VLVNNAGI     +L D+    +D+V+ V+LRGT+ +++  
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTL-DIRPGDYDKVLDVSLRGTLLMSQAV  166

Query  121  AAQMIEAARGGCIVNISSIGARQPTAGLG--HYEATKAGVDALTRTGAIELAGHGIRVNG  178
             + M   + +G IV +SS++A++  + +G  HY A+KAGV +L ++ A E++ + IR+N+
Sbjct  167  IPTMRAQG-SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  179  VAPGPVHTPMTAGLMTDPAARGAWESRIPLGRIATPGDITPLVLFLASPQAGHITGTVVQ  238
            +APG +HT +T+GLM D   ++  E+ IPLGR++++ D++   LFLAS  ++ +TG  ++
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VDGGQLL  245
            V+GG L+
Sbjct  285  VNGGMLI  291

774) fabG in NC_017514


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 167/247 (68%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMVREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+M RE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

775) fabG in NC_017518


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 167/247 (68%), Gaps = 6/247 (2%)

Query  6    LSGKIALVTGAS--RgigaaiadtlaaagaKVIGTATSESGAAAISERLAQWGGEGRVLN  63
            L GKIA++TGA+  RGIG A A T+A  GA+V+     ES+A   +  L++ G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   SAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFRASK  123
             A+   V + +A I   FG++D+LVNNAGIT+    + ++  + D +++V+L++ +  S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVLRGMMKQRSGRIINITSVVGVMGNA--GQTNYAAAKAGLIGFSKSMVREVGSRGITVN  181
            AV+  M  Q SG I+ ++SV +  G +  G  +Y+AAKAG++G++K+M RE G+  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIDTDMTRAL-PEETRQTFTAQTALGRFGDAQDIADAVLFLASDQAKYITGQTLH  240
             +APG+I+TD+T +L  +E R+++    +LGR+G AQD+A+A LFLASD + Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGMLM  247
            VNGGML+
Sbjct  285  VNGGMLI  291

776) Desor_4702 in NC_016584


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 105/250 (42%), Positives = 171/250 (69%), Gaps = 9/250 (3%)

Query  1    MMLKDSVAVVTGSA--RGIGRAIALELAAAGVKVVINYAGSSDKAEETAALIREAGGESI  58
            M+L++ +A++TG+A  RGIGRA A+ +A  G +VVI   + S   + +A+L    G   +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHL  99

Query  59   AVQADVSRQEDVDRLISTTLDHFGKIDILVNNAGITRDTLLLRMKETDWDTVMATNLKGV  118
            ++ A+V+ + +V + ++T ++HFG+ID+LVNNAGIT+    L ++  D D V+  +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSKGMLKQRSGVIINISSVVGLSgnag--qanyaaakagiigFTKSVAKEFASR  176
            +L ++AV   M  Q SG I+ +SSV +  G +    ++Y+AAKAG++G+ K++A+EF++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GIRVNAVAPGYIFTDMTGTL-PEGTQSEILKGIPLGRIGQPEDVAKAVRFLVSPEASYIT  235
             IR+N++APG I TD+TG L  +  +  I+ GIPLGR+G ++DVA+A  FL S  +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLSVDGGM  245
            G TL V+GGM
Sbjct  280  GITLDVNGGM  289

777) fabG in NC_017445


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 174/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVVGTATSQSGADAISSYLGDNGKGLLL  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+VV     +S+A   ++ LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDATSITNVLENIRAEFGEVDILVNNAGITRDNLLMRMKDEEWQDILDTNLTSVFRLS  118
            NV+D + + + +  I  +FG +D+LVNNAGIT+    + ++  + + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KSVMRAMMKKRAGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            ++V+ +M  + +G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SEEQRAGILAEVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

778) Tmari_1732 in NC_021214


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 106/255 (42%), Positives = 174/255 (69%), Gaps = 16/255 (6%)

Query  1    MRLEGKVCLITGAAS--GIGKATTLLFAQEGATVI----AGDISKENLDSLVKEAEGLPG  54
            M L+GK+ +ITGAAS  GIG+AT++ FAQ+GA V+        +++   +L     GL++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  55   KVDPYVLNVTDRDQIkevvekvvQKYGRIDVLVNNAGITRDALLVRMKEEDWDAVINVNL  114
                   NV+D  Q+K+ V  +++ +GRIDVLVNNAGIT+    + ++  D D V++V+L
Sbjct  104  -------NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  115  KGVFNVTQMVVPYMIKQRngsivnvssvvgiygnP--GQTNYAASKAGVIGMTKTWAKEL  172
            +G + ++Q V+P M  Q +GSIV +SSV +  G    G  +Y+A+KAGV+G+ K+ A+E+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  173  AGRNIRVNAVAPGFIETPMTEKL-PEKARETALSRIPLGRFGKPEEVAQVILFLASDESS  231
            +  +IR+N++APG+I+T +T  L  +  R++ +  IPLGR+G +++VA+  LFLASD SS
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  232  YVTGQVIGIDGGLVI  246
            Y+TG  ++++GG++I
Sbjct  277  YLTGITLDVNGGMLI  291

779) TM1724 in NC_000853


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 106/255 (42%), Positives = 174/255 (69%), Gaps = 16/255 (6%)

Query  1    MRLEGKVCLITGAAS--GIGKATTLLFAQEGATVI----AGDISKENLDSLVKEAEGLPG  54
            M L+GK+ +ITGAAS  GIG+AT++ FAQ+GA V+        +++   +L     GL++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  55   KVDPYVLNVTDRDQIkevvekvvQKYGRIDVLVNNAGITRDALLVRMKEEDWDAVINVNL  114
                   NV+D  Q+K+ V  +++ +GRIDVLVNNAGIT+    + ++  D D V++V+L
Sbjct  104  -------NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  115  KGVFNVTQMVVPYMIKQRngsivnvssvvgiygnP--GQTNYAASKAGVIGMTKTWAKEL  172
            +G + ++Q V+P M  Q +GSIV +SSV +  G    G  +Y+A+KAGV+G+ K+ A+E+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  173  AGRNIRVNAVAPGFIETPMTEKL-PEKARETALSRIPLGRFGKPEEVAQVILFLASDESS  231
            +  +IR+N++APG+I+T +T  L  +  R++ +  IPLGR+G +++VA+  LFLASD SS
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  232  YVTGQVIGIDGGLVI  246
            Y+TG  ++++GG++I
Sbjct  277  YLTGITLDVNGGMLI  291

780) fabG in NC_010516


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 103/253 (41%), Positives = 162/253 (65%), Gaps = 15/253 (5%)

Query  4    LEGKTAIVTGAS--RGIGRAIAKKLASMGANLV---LNYRKSANEIDTLIEEIKVYEVET  58
            L+GK AI+TGA+  RGIGRA A  +A  GA +V   L+   + +   TL E         
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG-------H  98

Query  59   LVIQGDVSSFEDCKKIADEAKNKFGSIDILINNAGITKDALILRMTEEDFDKVISVNLKG  118
            L + ++V+   + K+      + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VYNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGS  176
                S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGITVNAVAPGYIKTDMTDAL-PEKVKKSIEDVLPLKRLGTPEDVAEAVGFLASDKASYI  235
              I +N++APG I TD+T++L  +  + +I + +PL RLG+++DVA+A  FLASD +SY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVIHVDGGMII  248
            TG  ++V+GGM+I
Sbjct  279  TGITLDVNGGMLI  291

781) Slit_1530 in NC_013959


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 174/252 (70%), Gaps = 8/252 (3%)

Query  1    MTLQGQIALVTGAS--RGIGQAIALELGRQGATVIGTATSDNGAQAIGAYLDAAGIKGKG  58
            M LQG+IA++TGA+  RGIG+A A+ ++++GA V+     +++A+  +A L+ + +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   FALNVNDAAQTEQVLAAIREQFGEISILVNNAGITKDNLLARMTDEEWDDVLSTNLKSVF  118
            +A NV D +Q  Q +A+I E+FG I +LVNNAGIT+      +   + D VL  +L++ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSRAVLRAMMKArggriisissvvgsMGNP--GQANYAASKAGMAGFTKSLAQEIGSRN  176
             +S+AV+ +M    +G I+ +SSV +  G    G ++Y+A+KAG+ G+ K++A+E+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNCVAPGFIDTDMTHAL-GEEQRAKLVEHVPLKRLGQPADIAAAVAFLASPGAAYITG  235
            I +N +APG+I+TD+T +L  +E+R  ++E +PL RLG + D+A A  FLAS  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  VTLHVNGGMYME  247
            +TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

782) Halhy_1942 in NC_015510


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  130 bits (475),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 102/249 (41%), Positives = 162/249 (66%), Gaps = 8/249 (3%)

Query  4    LQNKVAIVTGGAN--GIGKATALRFLQEGATVAIWDINEVSGMALATEWAAQGLSCKFYK  61
            LQ K+AI+TG+A+  GIG+ATA+ F Q+GA V I D++E ++   A+  +   L+     
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLG---LA  102

Query  62   VNTADLdavqqaadavvqdFGQIDILINNAGITRDSSLKKMSPLQWQQVIDVNLSGVFYC  121
             N AD   V+QA  +++++FG+ID+L+NNAGIT+      + P + ++V+DV+L G +  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  122  TKAVTPYMSERNYGRIINAASVVALYGN--FGQTNYVASKAGVIGMTKVWAREFGRKGIT  179
            ++AV P M  +  G I+  +SV A  G   FG  +Y A+KAGV+G+ K  AREFG   I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  180  VNAIAPGFIKTEMVETI-PAEYLADLESRTPVGRMGLPEDIANAYLFLASDEASFINGVT  238
            +N+IAPG+I T++   +   E    +    P+GR+G ++D+ANA LFLASD +S++ G+T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  239  LSVDGGLIM  247
            L V+GG+++
Sbjct  283  LDVNGGMLI  291

783) AZL_b06200 in NC_013856


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (471),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 105/253 (42%), Positives = 161/253 (64%), Gaps = 21/253 (8%)

Query  11   LSGKTAIVTGAAS--GIGRATATLFTEVGARVLFVDLDGEGARQAAEEVGADWA--ACDI  66
            L GK AI+TGAAS  GIGRATA  F++ GARV+++DLD  +AR+AA  +G +    A ++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  67   ADEAAIRSLYDLAAERLGHVDILANVAAYRRKADTMTMPASEWDIMHAVTARGTFLMMRS  126
            ADE+ ++       E++G++D+L N A+  +   T+ + +++ D +  V+ RGT+LM ++
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  127  AIDAMRRQGTGGSIVNVSSVSAKHPT-IFSNTHYDAAKAGVDAMTRAAAIEFASDGIRVN  185
             I +MR QG+G SIV +SSVSA++   IF+  HY AAKAGV ++ +A A EF++D IR+N
Sbjct  166  VIPTMRAQGSG-SIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  186  SVQPGGTASGGAKAMTVEQLPTGPMTQPGR------IPLRRISEPVEQARAILFLASPAA  239
            S+ PG         +   ++  G M +  R      IPL R++ + + A A LFLAS  +
Sbjct  225  SIAPG---------LIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLS  275

Query  240  SYITGHHLTVDGG  252
            SY+TG  L V+GG
Sbjct  276  SYLTGITLDVNGG  288

784) fabG2 in NC_013508


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MRLEGKIALVTGAS--RGIGRAIAETLVARGARVIGTATSDKGAEAISAYLGDNGMGMAL  58
            M L+GKIA++TGA+  RGIGRA A T+  +GARV+     + +A   +A LG+  +G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSASIDSMLERVRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + +   +  +  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDEQRSGILAAVPAGRLGDAKEIAYAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  DE+R +I+ ++P GRLG A+++A A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

785) ETAF_1898 in NC_017309


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MRLEGKIALVTGAS--RGIGRAIAETLVARGARVIGTATSDKGAEAISAYLGDNGMGMAL  58
            M L+GKIA++TGA+  RGIGRA A T+  +GARV+     + +A   +A LG+  +G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSASIDSMLERVRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + +   +  +  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDEQRSGILAAVPAGRLGDAKEIAYAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  DE+R +I+ ++P GRLG A+++A A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

786) MXAN_6399 in NC_008095


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 167/246 (68%), Gaps = 11/246 (4%)

Query  18   IITGGS--RGIGKAIALAFAAEGADIV-LNYGSNaeaarqaaaeveaqgrrCVLVPGSVA  74
            IITG++  RGIG+A A++FA +GA +V L+ + +A     A+      G     ++++VA
Sbjct  52   IITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLG-----LAANVA  106

Query  75   SPDVPGQLREAALSHFGRIDVLVNNAGISRDGHLMMLQAAAWRETVDVNLYGALACCQAV  134
                  Q   + + HFGRIDVLVNNAGI++    + ++++     +DV+L G+L   QAV
Sbjct  107  DESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAV  166

Query  135  IPTMMQQGRGAIINMSSSAGIRGRA--GQVPYAATKGALIGLTQALAGELGPHGIRVNCV  192
            IPTM  QG G+I+ MSS ++ RG +  G   Y+A+K++++GL +A+A E+GP+ IR+N +
Sbjct  167  IPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSI  226

Query  193  APGFVETEMVAGLMNRPGVREGFIQATPIRRLGTVEDVANATLFLASPESAYVVGDVLRV  252
            APG+++T++ +GLM+    R+++I++ P+ RLG+ +DVANA+LFLAS  S+Y+ G  L V
Sbjct  227  APGLIHTDITGGLMQ-DERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  253  NGGLVL  258
            NGG+++
Sbjct  286  NGGMLI  291

787) F504_1020 in NC_020799


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 174/248 (71%), Gaps = 10/248 (4%)

Query  5    LNNQVALVTGAS--RGIGRAIALELARQGATVVGTATSEAGAQAISAYFAEAGVKGAGVV  62
            L+ ++A++TGA+  RGIGRA A+ +A++GA VV     E++A+  +A ++E+ +   G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAARCEAVIDEAIKTHGGLNILVNNAGITKDNLAMRMKDDEWMAVIDTNLSAVFRL  122
             NV D ++    +   I   G +++LVNNAGIT+   ++ ++ ++   V+D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQANYAAAKAGVEGMARAMAKEIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G ++Y+AAKAGV G+++AMA+E+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNSVAPGFIDTDMTK-VLSDEQHTALKAQIPLGRLGMPEDIANAVAFLASPAAGYITGA  238
             +NS+APG+I+TD+T  ++ DE++ A+   IPLGRLG ++D+ANA  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

788) Tter_1966 in NC_013526


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 168/253 (67%), Gaps = 12/253 (4%)

Query  1    MRLDGKVAVITGAAS--GIGRGTAEVFAEHGARLVLVDLDAEGLAGLVGQLKAGGAEVVG  58
            M L+GK+A+ITGAAS  GIGR+TA  FA+HGAR+V++DLD  +  +  + L   G   +G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  59   ISGDVSHKATAVEAVGAALRQYGRIDVVFNNAGVMYSGAFHELGDDLWDRVLDVNLRGTY  118
            ++++V++ +   +AV++ + ++GRIDV+ NNAG+  +    ++  +  D+VLDV+LRGT 
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  LFCREAIPHMLEQGRGSIINMSSVMATLTEPGYEA--YTTSKAGIIGLTKAIAVSYAERG  176
            L  +  IP M  QG GSI+ MSSV A      + +  Y+++KAG++GL KA+A  ++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  IRCNCVCPGWVDTPLNRRLAEELGGMDRLNALIKQQQPNGRMLSTREVANAVLFLASDES  236
            IR N + PG ++T +   L ++    +R +A+I +  P GR+ ++++VANA LFLASD S
Sbjct  221  IRINSIAPGLIHTDITGGLMQD----ERRHAII-EGIPLGRLGAAQDVANAALFLASDLS  275

Query  237  SGVTGAAIYVDGG  249
            S +TG ++ V+GG
Sbjct  276  SYLTGITLDVNGG  288

789) ANH9381_0332 in NC_016513


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 163/246 (67%), Gaps = 5/246 (2%)

Query  1    MQGKIALVTGAT--RGIGRAVAEELASKGAFVIGTATSEKGAETISAYLGEKGRGLVLNV  58
            +QGKIA++TGA+  RGIGRA A  +A  GA V+     E +A   +A LGE   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   ADQASIEGVLERIKKEFGDIDILVNNAGITRDNLLMRMKDEEWFDILQTNLSSVYHLSKA  118
            AD++ +   +  I  +FG ID+LVNNAGIT+    + ++  +   +L+ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  MLRSMMKKRFGRIINIGSVVGSSGNP--GQSNYCAAKAGLVGFSKALAKEVASRGITVNV  176
            ++ +M  +  G I+ ++SV +  G    G ++Y AAKAG++G++KA+A+E ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  177  VAPGFIATDMT-EVLSEELKNNLLTQIPAGHLGKPKDIAKAVAFLASDDAAYINGITLHV  235
            +APG+I TD+T  ++ +E ++ ++  IP G+LG ++D+A+A  FLASD ++Y+ GITL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  236  NGGMYM  241
            NGGM +
Sbjct  286  NGGMLI  291

790) BC1001_1012 in NC_015136


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 148/225 (66%), Gaps = 6/225 (2%)

Query  23   LKFAQEGATLALCDLNAEAVSSVVDACRAAGATAVGFAVNVANREAIQDMAASVRARFGR  82
            + FAQ+GA + + DL+  A     DA  + G   +G+A NVA+   +++  A++  +FGR
Sbjct  68   VTFAQHGARVVILDLDESAAR---DAAATLGEGHLGLAANVADESQVKQAVATIIEHFGR  124

Query  83   IDVLVNNAGITRDARLQKMTPEQFDQVIDVNLRGVFNATQAVVETMIEQNAGVILNASSV  142
            IDVLVNNAGIT+  +   + P ++D+V+DV+LRG +  +QAV+ TM  Q +G I+  SSV
Sbjct  125  IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSV  184

Query  143  VGIYGN--FGQTNYAAAKFGVIGFTKTWSRELGPKGIRVNAVAPGFIDTPILETVPNEVL  200
             +  G   FG  +Y+AAK GV+G+ K+ +RE+GP  IR+N++APG+I+T I   + ++  
Sbjct  185  SAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDER  244

Query  201  EKMCVQ-VSLRRLGKPEEIANIYAFLASDEASYINGAVIEASGGM  244
                ++ ++L RLG ++++AN   FLASD +SY+ G  ++ +GGM
Sbjct  245  RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGM  289

791) fabG in NC_012563


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 166/252 (66%), Gaps = 13/252 (5%)

Query  4    LEGRTAIVTGAS--RGIGRAIAKKLASMGANLV-LNY-RSSAKEIDTLLEEIEEFRIETL  59
            L+G+ AI+TGA+  RGIGRA A  +A  GA +V L+   S+A++  + L E        L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE------GHL  99

Query  60   VIQGDVSSFEDSKKIADEAKNKFGTIDILINNAGITKDSLILRMTEEDFDKVISVNLKGV  119
             + ++V+   + K+      + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  YNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGSR  177
               S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GITVNAVAPGYIRTDMTDAL-PEKVKKSIEDLLPLKRLGTPEDVAETVGFLASDKAAYIT  236
             I +N++APG I+TD+T++L  +  + +I + +PL RLG+++DVA++  FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIHVDGGMII  248
            G  ++V+GGM+I
Sbjct  280  GITLDVNGGMLI  291

792) fabG in NC_009697


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (471),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 166/252 (66%), Gaps = 13/252 (5%)

Query  4    LEGRTAIVTGAS--RGIGRAIAKKLASMGANLV-LNY-RSSAKEIDTLLEEIEEFGIETL  59
            L+G+ AI+TGA+  RGIGRA A  +A  GA +V L+   S+A++  + L E        L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE------GHL  99

Query  60   VIQGDVSSFEDSKKIADEAKNKFGTIDILINNAGITKDSLILRMTEEDFDKVISVNLKGV  119
             + ++V+   + K+      + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  YNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGSR  177
               S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GITVNAVAPGYIRTDMTDAL-PEKVKKSIEDLLPLKRLGTPEDVAEAVGFLASDKAAYIT  236
             I +N++APG I+TD+T++L  +  + +I + +PL RLG+++DVA+A  FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIHVDGGMII  248
            G  ++V+GGM+I
Sbjct  280  GITLDVNGGMLI  291

793) fabG in NC_009495


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 166/252 (66%), Gaps = 13/252 (5%)

Query  8    LEGRTAIVTGAS--RGIGRAIAKKLASMGANLV-LNY-RSSAKEIDTLLEEIEEFGIETL  63
            L+G+ AI+TGA+  RGIGRA A  +A  GA +V L+   S+A++  + L E        L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE------GHL  99

Query  64   VIQGDVSSFEDSKKIADEAKNKFGTIDILINNAGITKDSLILRMTEEDFDKVISVNLKGV  123
             + ++V+   + K+      + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  124  YNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGSR  181
               S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  182  GITVNAVAPGYIRTDMTDAL-PEKVKKSIEDLLPLKRLGTPEDVAEAVGFLASDKAAYIT  240
             I +N++APG I+TD+T++L  +  + +I + +PL RLG+++DVA+A  FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  241  GQVIHVDGGMII  252
            G  ++V+GGM+I
Sbjct  280  GITLDVNGGMLI  291

794) fabG in NC_009698


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (471),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 166/252 (66%), Gaps = 13/252 (5%)

Query  4    LEGRTAIVTGAS--RGIGRAIAKKLASMGANLV-LNY-RSSAKEIDTLLEEIEEFGIETL  59
            L+G+ AI+TGA+  RGIGRA A  +A  GA +V L+   S+A++  + L E        L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE------GHL  99

Query  60   VIQGDVSSFEDSKKIADEAKNKFGTIDILINNAGITKDSLILRMTEEDFDKVISVNLKGV  119
             + ++V+   + K+      + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  YNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGSR  177
               S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GITVNAVAPGYIRTDMTDAL-PEKVKKSIEDLLPLKRLGTPEDVAEAVGFLASDKAAYIT  236
             I +N++APG I+TD+T++L  +  + +I + +PL RLG+++DVA+A  FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIHVDGGMII  248
            G  ++V+GGM+I
Sbjct  280  GITLDVNGGMLI  291

795) CtCNB1_0618 in NC_013446


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/254 (41%), Positives = 167/254 (66%), Gaps = 11/254 (4%)

Query  1    MLKDKVALVTGAAS--GIGRCVALTWAREGARVVLADLNEEQGQESAALVRELGAEALYL  58
            +L++K+A++TGAAS  GIGR  A+T A++GARVV+ DL+E  ++++AA    LG   L L
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLGL  101

Query  59   RADAGSPADHEALVALTMRHFGRLDVACNNAGIGGASAPTADYPLDAWEQVLRVNLSGVF  118
             A+ +  ++    VA  + HFGR+DV  NNAGI   +  T D   +  ++VL V+L G +
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGIT-QPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  YACKYQIAAMLQGGGGSIINMASILGAVG---FANSAAYTAAKHGVLGLTKAAALEYSAR  175
               +  I++M   G+GSI+ M+S+ +  G   F+ ++ Y+AAK GVLGL KA A E+++ 
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFG-GPHYSAAKAGVLGLGKAMAREFGPD  219

Query  176  GVRINAVGPGFVQTPMISGLEQDPATHAALVAAHPMGRLGQPEEIAELVAWLASDRASFV  235
             +RIN+++PG+++T + +GL QD   H A++ + P+GRLG ++++A+    LASD +S++
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRH-AIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGAYYPVDGGYLAR  249
            TG    V+GG L +
Sbjct  279  TGITLDVNGGMLIH  292

796) Cylst_2054 in NC_019757


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 170/252 (68%), Gaps = 15/252 (5%)

Query  11   LQNQVAIITGAS--RGIGRAIALELATQGAKVVI-NYAQSSAAADKVVEEITaaggiaia  67
            LQ ++AIITGA+  RGIGRA A+ +A +GA+VVI +  +S+A      +  ++ G   ++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-----DAAATLGEGHLG  100

Query  68   LQADVSQVDQVDALVKLVTDKFKRIDILVNNAGIARDALLLRMKLEEWKAVIDLNLTGVF  127
            L A+V++  QV   V  + + F RID+LVNNAGI++    L ++  +   V+D++L G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  128  LCTKAVSKIMLKQRSGRIINIASVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELASRG  185
            L ++AV   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  186  ITANAVAPGFITTDMTNDLKADE----ILNYIPLGRYGTPEEIAGMVRFLAADPAAAYIT  241
            I  N++APG+I TD+T +L  DE    I++ IPLGR G+++++A    FLA+D  ++Y+T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSYLT  279

Query  242  GQVFNVDGGMVM  253
            G  ++V+GGM++
Sbjct  280  GITLDVNGGMLI  291

797) HBHAL_1416 in NC_017668


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 104/257 (41%), Positives = 173/257 (68%), Gaps = 17/257 (6%)

Query  4    LNQKIAVVTGAAT--GIGQATVKLFAEEGATVVCADVNEEDVQNTVNEVKNNGGKAEF-V  60
            L+ KIA++TGAA+  GIG+AT   FA++GA VV  D++E   +++   +    G +++ +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  61   YVDVSNEESVTSLANHIKETYGSIDVLFNNAGIDEEGGKVHEYPVELFDQIIAVDLRGTF  120
              +V++E  V      I E +G IDVL NNAGI +    ++  P + +D+++ V LRGT+
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTL  160

Query  121  LTSKYLLPLMQERGSGSIINTSSMSG-RAADL-DRSGYNAAKGGITNFTKAMAIDYAREG  178
            L S+ ++P M+ +GSGSI+  SS+S+ R++++ + + Y+AAK+G+  + KAMA +++ + 
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNSIAPGTIETPLIDELAGSKQQEQGREFREANKWVTPLGRLGDPKEVANVALFLASD  238
            IR+NSIAPG I+T + + L    Q+E+ + + E+     PLGRLG +++VAN ALFLASD
Sbjct  221  IRINSIAPGLIHTDITGGL---MQDERRHAIIEG----IPLGRLGAAQDVANAALFLASD  273

Query  239  ESSYITGEDITVDGGIM  255
             SSY+TG  + V+GG++
Sbjct  274  LSSYLTGITLDVNGGML  290

798) BRPE64_BCDS05710 in NC_021294


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 105/262 (41%), Positives = 172/262 (66%), Gaps = 17/262 (6%)

Query  1    MLLENKVVVVTGGS--RGIGRAIALASAREGADVAINYWGDNDKSYGKESAVESIVAEIE  58
            MLL+ K+ ++TG++  RGIGRA A++ A++GA V I    D D S ++++A         
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAA--------A  92

Query  59   ALGRRAIAVEGNVALHETGIELVRRTVQAFGRVDVLSSNAGICPFHAFLDMPPSVYETTV  118
            +LG   +++ +NVA +    + V   ++ FGR+DVL +NAGI      LD+ P+ Y+  +
Sbjct  93   TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVL  152

Query  119  AVNLNGAFYVTQAVANQMKAQGTGGAIVATSSISALVGGGM--QTHYTPTKAGVHSLMQS  176
             V+L G++ ++QAV   M+AQG+ G+IV  SS+SA  GGG+    HY+++KAGV +L ++
Sbjct  153  DVSLRGTLLMSQAVIPTMRAQGS-GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKA  211

Query  177  CAIALGPYGIRCNSVMPGTIATDLNADDLANPDKRAYMEKRIPLGRLGAPDDVAQCVVFL  236
             A  +GP  IR NS+ PG I TD+ + +L + ++R  +   IPLGRLGA++DVA+  +FL
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITG-GLMQDERRHAIIEGIPLGRLGAAQDVANAALFL  270

Query  237  ASERARYVTGASLLVDGGLFVN  258
            AS+ + Y+TG +L V+GG++++
Sbjct  271  ASDLSSYLTGITLDVNGGMLIH  292

799) fabG in NC_011753


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (474),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKVALVTGAS--RGIGRAIAELLVERGAKVIGTATSEGGAAAISEYLGENGKGLA  58
            +M L+GK+A++TGA+  RGIGRA A  + ++GA+V+     E++A   +  LGE   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDVDSIAATLKTINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTPIFRM  118
             NV+D   +  ++ TI ++FG ID+LVNNAGIT+    + ++ ++ + ++D +L   + M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRQGRIVNVGSVVGTMgnag--qanyaaakagVIGFTKSMAREVASRGIT  176
            S+AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G+ K+MARE ++  I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRAVTLANVPAGRLGDPREIAEAVVFLASPAAAYITGET  235
            +N++APG+I+TD+T +L +D++R   +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

800) HPL003_17955 in NC_016641


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (474),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 163/248 (66%), Gaps = 9/248 (3%)

Query  5    LSGKTALVTGAS--RGIGRSIALTLAEAGANvavnyagseaaaaevaeqiraKGVEAITV  62
            L GK A++TGA+  RGIGR+ A+T+A+ GA V +   +  AA    A      G   + +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  63   QANVGRADEADRLIKDVIGAWGQIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFN  122
             ANV+   +  + +  +I   G+ID+LVNNAGIT+    + ++  ++D+V++ +L+G + 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  CLKAATRPMMKQRSGRIINISSVVGVLGNA--GQANYVAAKAGVIGLTKSSARELASRGI  180
              +A    M  Q SG I+ +SSV +  G +  G ++Y AAKAGV+GL K+ ARE+++  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  TVNCVAPGFIDTEMTQ-VLADDLRDNMLSGIPLARLGRPEEIADVVLFLASDASSYMTGQ  239
             +N +APG+I+T++T  ++ D+ R+ ++ GIPL+RLG ++++A+  LFLASD SSY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  TLHVDGGM  247
            TL+V+GGM
Sbjct  282  TLDVNGGM  289

801) CK1_15600 in NC_021014


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (474),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 167/248 (68%), Gaps = 11/248 (4%)

Query  3    EKKIAVVTGGA--RGIGKAIALELAKAGNLVVINYNGSEEKARETKAEIEAAGGQADI-L  59
            + KIA++TG+A  RGIG+A A+ +A+ G  VVI  +  E  AR++ A +    G++++ L
Sbjct  47   QGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATL----GEGHLGL  101

Query  60   QCNVADFDACEAFFKAVAEKYGRVDILVNNAGVTKDGLLMKMSEEDFSRVVDINLKGTFN  119
              NVAD         ++ E +GR+D+LVNNAG+T+    + +   D+ +V+D++L+GT+ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  120  CIRHVSRMMLKQRSGRIISLSSVVGLRGNA--GQANYAASKAGIIGLTKSAAKELASRGI  177
              + V   M  Q SG I+ +SSV + RG +  G ++Y+A+KAG++GL K+ A+E+++  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  178  TVNAIAPGFIKTDMT-DVLSDKVKENIAASIPMGSMGTTEDVAKAAAFLASDGARYITGQ  236
             +N+IAPG+I TD+T +++ D  ++ I  +IP+G +G+++DVA+AA FLASD + Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  237  VLRVDGGM  244
             L V+GGM
Sbjct  282  TLDVNGGM  289

802) fabG in NC_020796


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  129 bits (473),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSLEGKIALVTGAS--RGIGRAIAETLVARGARVIGTATSDKGAEAISAYLGDNGMGMAL  58
            M L+GKIA++TGA+  RGIGRA A T+  +GARV+     + +A   +A LG+  +G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSASIDSMLERVRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + +   +  +  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDEQRSGILAAVPAGRLGDAKEIAYAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  DE+R +I+ ++P GRLG A+++A A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

803) REQ_45140 in NC_014659


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 106/247 (43%), Positives = 168/247 (69%), Gaps = 11/247 (4%)

Query  4    LEGKVAIVtgaaqgmgaataR--LFVHEGARVVLGDVLEEKGRALAAELGDAAIFTPLDV  61
            L+GK+AI+TGAA   G + A    F ++GARVV+ D+ E  +R  AA LG++ +  + +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   SDESSWESAVAVAVDRFGGLDILVNNAGVMHWAPIEDLDVART--ERLLDINVLGNLLGA  119
            +DES    AVA  +++FG +D+LVNNAG+ +  PI  LD+     +++LD+++ G LL +
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQ--PIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  120  KAVVPTMKKAGRGVIVNISSVDGLR--GVNGLAAYTASKWAVRGLTKALAYELGPAGIRV  177
            +AV+PTM+  G G IV +SSV + R  G+ G + Y+A+K +V GL KA+A E+GP  IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  178  CSVHPGGVDTTLGNPGGLVGDDLQSKYV-GVPLQRIGESEDIARATLFVASDEASYISGA  236
             S+ PG ++T +   GGL+ D+ +   + G+PL R+G ++D+A A+LF+ASD +SY++G 
Sbjct  224  NSIAPGLIHTDI--TGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  237  ELAVDGG  243
             L V+GG
Sbjct  282  TLDVNGG  288

804) CC1_24310 in NC_021009


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 104/251 (42%), Positives = 167/251 (67%), Gaps = 11/251 (4%)

Query  4    FDGKTAVVTGAS--RGIGRAIAKKLAACGATVII-NYNGSESKAAAVQQEIIDEGGRADI  60
            ++GK A++TGA+  RGIGRA A  +A  GA V+I + + S ++ AA     ++EG  +  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA---ATLGEGHLG--  100

Query  61   FQCNVSDFAACEAFFKAVTEKYGRIDFLINNAGITKDGLLMAMKEEDFDSVIDVNLKGTF  120
            +  NV+D +       ++ E +GRID L+NNAGIT+    + ++  D+D V+DV+L+GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  HCIRFAARQMMRQRYGRIVNMASVVGVAGNA--GQANYSASKAGVIGLTKSAAKELASRG  178
               +     M  Q  G IV M+SV +  G +  G ++YSA+KAGV+GL K+ A+E+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  ITVNAIAPGMIETDMTADL-ADKVKDEMMKQIPLKRFGQAEDVANAAAFLVSDEAAYITG  237
            I +N+IAPG+I+TD+T++L  D  ++ ++  IPL R+G A+DVANAA FL SD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVLHVDGGMVM  248
              L+V+GGM++
Sbjct  281  ITLDVNGGMLI  291

805) Saro_0512 in NC_007794


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 159/248 (65%), Gaps = 4/248 (1%)

Query  4    LNGKVAIITGAA--RGMGESHARTFVREGARVVLTDLSEEAGKALVAELGDNAVFLKQDV  61
            L+GK+AIITGAA  RG+G + A TF ++GARVV+ DL E A++   A LG+  + L  +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   TDPQSWNAVVETAVREFGTIDILVNNAGILGPMAPTDSLDDEGYRKVCAVNQDSVFFGMR  121
            +D    +  V T + +FG ID+LVNNAGI  P+   D +   +Y KV  V+  + ++  +
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD-IRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLPVMVKARRGSIVNISSIAGMAANYGFPSLAYVASKFAVRGMTKATAVEFGKHNIRVN  181
            AV+P M     GSIV +SS+++  +   F +  Y A+K +V G+ KA A EFG ++IR+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  SVHPGFIQTPMMVEATDEVGGEALAQ-IPLGRIADPSEVSNLVLFLASDESSYITGSEHL  240
            S+ PG+I+T +     ++   +A+ + IPLGR++ + +V+N  LFLASD SSY+TG    
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VDAGMLAH  248
            V++GML H
Sbjct  285  VNGGMLIH  292

806) Odosp_0672 in NC_015160


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 172/252 (69%), Gaps = 11/252 (4%)

Query  1    MKLLEGKTALITGAS--RGIGKAVALAFAKQGANIAFTDLRYDENAQATEKEIEACGVKA  58
            + LL+GK A+ITGA+  RGIG+A A++FA++GA + + DL      +++ ++  A    +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL-----DESAARDAAATLGEG  97

Query  59   KM-YASNAADFAQTAATVEEIAKEFGRIDILVNNAGITKDTLLMRMTEEQWDAVINVNLK  117
             +  A+N AD +Q   +V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L+
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  118  SVFNFTKAVSAIMLKQKsgsiismssvvgvsgNA--GQANYSASKAGIIGFTKSVAKELG  175
            + +  ++AV + M  Q SGSI+ MSSV +  G +  G ++YSA+KAG++G+ K++A+E+G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  SRNIRANAVAPGFIITDMTAQLPEDVRKEWAAK-IPLRRGGTPEDIADVCTFLASDMSRY  234
            + +IR N++APG+I TD+T+ L +D R++     IPL R G+++D+A+   FLASD+S Y
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VTGQVIHVCGGM  246
            +TG  ++V GGM
Sbjct  278  LTGITLDVNGGM  289

807) fabg1 in NC_014562


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 174/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFEGKVALVTGAS--RGIGRAIAETLAARGAKVVGTATSQSGADAISAYLGDKGKGLLL  58
            M ++GK+A++TGA+  RGIGRA A T+A +GA+VV     +S+A   +A LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDADSINSVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D   ++  +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRAMMKKRVGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-NEDQRSGILAEVPAGRLGDAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L ++++R +I+  +P GRLG AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

808) STHERM_c21540 in NC_014484


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 105/250 (42%), Positives = 170/250 (68%), Gaps = 9/250 (3%)

Query  1    MLLKDKKALVTGGS--RGIGARIVRLFLQEGASVWFVDLNPSEHMEEFQSLAAERGTTVA  58
            MLL++K A++TG++  RGIG      F Q+GA V ++DL+ S   +   +L+  +    A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   YRQCNVADEEQVDKVVGEILTESGGIDVLVNNAGITRDGLIFRMSIDDWESVLRVNLTSA  118
                NVADE QV + V+ I+ + G IDVLVNNAGIT+    + +  +D + VL V+L ++
Sbjct  104  ----NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLFSRRIAHAMARQREGsiinissiVGVHGNA--GQCNYSASKAGLLGLTKSLAQEVASR  176
            +L S+ +  +M  Q  GSI+ +SS+ + +G +  G  +YSA+KAG+LGL K++A+E ++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NVRVNAIAPGFIDTPMTQKL-PDKVKDALLSRIPMGRLGQPEEVAKICLFLASDLASYVT  235
            ++R+N+IAPG+I+T +T  L  D  ++A++  IP+GRLG +++VA+  LFLASDL+SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQVIGVDGGM  245
            G  ++V+GGM
Sbjct  280  GITLDVNGGM  289

809) Spith_2197 in NC_017583


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 105/250 (42%), Positives = 170/250 (68%), Gaps = 9/250 (3%)

Query  1    MLLKDKKALVTGGS--RGIGARIVRLFLQEGASVWFVDLNPSEHMEEFQSLAAERGTTVA  58
            MLL++K A++TG++  RGIG      F Q+GA V ++DL+ S   +   +L+  +    A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   YKQCNVADEEQVDKVVGEILAESGGIDVLVNNAGITRDGLIFRMSFDDWESVLRVNLTSA  118
                NVADE QV + V+ I+ + G IDVLVNNAGIT+    + +  +D + VL V+L ++
Sbjct  104  ----NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLFSRRIAHAMARQREGsiinissiVGVHGNA--GQCNYSASKAGLLGLTKSLAQEVASR  176
            +L S+ +  +M  Q  GSI+ +SS+ + +G +  G  +YSA+KAG+LGL K++A+E ++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NVRVNAIAPGFIDTPMTQKL-PDKVKDALLSRIPMGRLGQPEEVAKICLFLASDLASYVT  235
            ++R+N+IAPG+I+T +T  L  D  ++A++  IP+GRLG +++VA+  LFLASDL+SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQVIGVDGGM  245
            G  ++V+GGM
Sbjct  280  GITLDVNGGM  289

810) Tnap_1082 in NC_013642


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 106/255 (42%), Positives = 173/255 (68%), Gaps = 16/255 (6%)

Query  1    MRLEGKVCLITGAAS--GIGKATTLLFMQEGATVI----AGDISKENLDSLVKEAEGLPG  54
            M L+GK+ +ITGAAS  GIG+AT++ F Q+GA V+        +++   +L     GL++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  55   KVDPYILNVTDRDQIkevvekvvQKYGRIDVLVNNAGITRDALLVRMKEEDWDAVINVNL  114
                   NV+D  Q+K+ V  +++ +GRIDVLVNNAGIT+    + ++  D D V++V+L
Sbjct  104  -------NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  115  KGVFNVTQMVVPYMIKQRngsivnvssvvgiygnP--GQTNYAASKAGVIGMTKTWAKEL  172
            +G + ++Q V+P M  Q +GSIV +SSV +  G    G  +Y+A+KAGV+G+ K+ A+E+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  173  AGRNIRVNAVAPGFIETPMTEKL-PEKAREAALSRIPLGRFGKPEEVAQVILFLASDESS  231
            +  +IR+N++APG+I+T +T  L  +  R+A +  IPLGR+G +++VA+  LFLASD SS
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  232  YVTGQVIGIDGGLVI  246
            Y+TG  ++++GG++I
Sbjct  277  YLTGITLDVNGGMLI  291

811) Tpet_1020 in NC_009486


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 106/255 (42%), Positives = 173/255 (68%), Gaps = 16/255 (6%)

Query  1    MRLEGKVCLITGAAS--GIGKATTLLFMQEGATVI----AGDISKENLDSLVKEAEGLPG  54
            M L+GK+ +ITGAAS  GIG+AT++ F Q+GA V+        +++   +L     GL++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  55   KVDPYILNVTDRDQIkevvekvvQKYGRIDVLVNNAGITRDALLVRMKEEDWDAVINVNL  114
                   NV+D  Q+K+ V  +++ +GRIDVLVNNAGIT+    + ++  D D V++V+L
Sbjct  104  -------NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  115  KGVFNVTQMVVPYMIKQRngsivnvssvvgiygnP--GQTNYAASKAGVIGMTKTWAKEL  172
            +G + ++Q V+P M  Q +GSIV +SSV +  G    G  +Y+A+KAGV+G+ K+ A+E+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  173  AGRNIRVNAVAPGFIETPMTEKL-PEKAREAALSRIPLGRFGKPEEVAQVILFLASDESS  231
            +  +IR+N++APG+I+T +T  L  +  R+A +  IPLGR+G +++VA+  LFLASD SS
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  232  YVTGQVIGIDGGLVI  246
            Y+TG  ++++GG++I
Sbjct  277  YLTGITLDVNGGMLI  291

812) fabG in NC_017297


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 167/252 (67%), Gaps = 13/252 (5%)

Query  4    LEGRTAIVTGAS--RGIGRAIAKKLASMGANLV-LNY-RSSAKEIDTLLEEIKEFGIETL  59
            L+G+ AI+TGA+  RGIGRA A  +A  GA +V L+   S+A++  + L E        L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE------GHL  99

Query  60   VIQGDVSSFADSKKIADEAKNKFGTIDILINNAGITKDSLILRMTEEDFDKVISVNLKGV  119
             + ++V+  ++ K+      + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  YNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGSR  177
               S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GITVNAVAPGYIRTDMTDAL-PERVKKSIEDLLPLKRLGTPEDVAETVGFLASDKAAYIT  236
             I +N++APG I+TD+T++L  +  + +I + +PL RLG+++DVA++  FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIHVDGGMII  248
            G  ++V+GGM+I
Sbjct  280  GITLDVNGGMLI  291

813) fabG in NC_009699


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 167/252 (67%), Gaps = 13/252 (5%)

Query  4    LEGRTAIVTGAS--RGIGRAIAKKLASMGANLV-LNY-RSSAKEIDTLLEEIKEFGIETL  59
            L+G+ AI+TGA+  RGIGRA A  +A  GA +V L+   S+A++  + L E        L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE------GHL  99

Query  60   VIQGDVSSFADSKKIADEAKNKFGTIDILINNAGITKDSLILRMTEEDFDKVISVNLKGV  119
             + ++V+  ++ K+      + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  YNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGSR  177
               S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GITVNAVAPGYIRTDMTDAL-PERVKKSIEDLLPLKRLGTPEDVAETVGFLASDKAAYIT  236
             I +N++APG I+TD+T++L  +  + +I + +PL RLG+++DVA++  FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIHVDGGMII  248
            G  ++V+GGM+I
Sbjct  280  GITLDVNGGMLI  291

814) H04402_03699 in NC_017299


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 166/252 (66%), Gaps = 13/252 (5%)

Query  4    LEGRTAIVTGAS--RGIGRAIAKKLASMGANLV-LNY-RSSAKEIDTLLEEIKEFGIETL  59
            L+G+ AI+TGA+  RGIGRA A  +A  GA +V L+   S+A++  + L E        L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE------GHL  99

Query  60   VIQGDVSSFEDSKKIADEAKNKFGTIDILINNAGITKDSLILRMTEEDFDKVISVNLKGV  119
             + ++V+   + K+      + FG ID+L+NNAGIT+    L +   D+DKV+ V+L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  120  YNCSKHIAPIMLKQRSGKIINISSVVGVAGNA--GQCNYAAAKAGVIGITKSLAKELGSR  177
               S+ + P M  Q SG I+ +SSV +  G +  G  +Y+AAKAGV+G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  GITVNAVAPGYIRTDMTDAL-PERVKKSIEDLLPLKRLGTPEDVAETVGFLASDKAAYIT  236
             I +N++APG I+TD+T++L  +  + +I + +PL RLG+++DVA++  FLASD ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GQVIHVDGGMII  248
            G  ++V+GGM+I
Sbjct  280  GITLDVNGGMLI  291

815) Nmul_A1074 in NC_007614


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 173/252 (69%), Gaps = 10/252 (3%)

Query  1    MLQNQIALVTGAS--RGIGQAIALELGRQGITVIGTATTEEGARNVDHFLKEAGCKGR-G  57
            +LQ +IA++TGA+  RGIG+A A+ ++++G  V+     E +AR+    L E    G+ G
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE----GHLG  100

Query  58   MALNVNNPSQVESVVKAVQEEFGGITILVNNAGITRDNLLLRMKDEEWDEIMETDLKSVF  117
            +A NV + SQV   V ++ E+FG I +LVNNAGIT+    L ++  + D +++  L++ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  RLSRAVLRSMVRVRYGRIINISSIVGATGN--IGQANYAAAKAGIFGFSKSLAREVAGRN  175
             +S+AV+ +M     G I+ +SS+ +  G   +G ++Y+AAKAG++G++K++ARE +  +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  ITVNCIAPGFIATDMTQSLTEKQ-QQALFQQIPLGRLGCPEDVaaavafiaspaaaYITG  234
            I +N IAPG+I TD+T +L + + ++A+++ IPLGRLG ++DVA A  F+AS  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  235  VTLHVNGGMYMD  246
            +TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

816) fabG2 in NC_021150


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 163/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAVVIGTATSSSGAESIAETLKSNGIEGAG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   A TL    +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LVLDVSSDESVATTLEHIQQHLGQPAILVNNAGITRDNLMLRMKDEEWHDVINTNLNSLY  118
            L  +V+ +  V  ++  I +H+G+  +LVNNAGIT+    L ++  + + V++ +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKAVLRGMTKARWGRIVNIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRG  176
             +S+AV+  M     G IV ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVAPGFIDTDMTREL-PEAQRNALLGQIPLGRLGQAGEIAQVVAFLASDGASYVTG  235
            I +N++APG+I+TD+T  L  + +R+A++  IPLGRLG A ++A+   FLASD +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

817) fabG2 in NC_021149


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 163/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAVVIGTATSSSGAESIAETLKSNGIEGAG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   A TL    +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LVLDVSSDESVATTLEHIQQHLGQPAILVNNAGITRDNLMLRMKDEEWHDVINTNLNSLY  118
            L  +V+ +  V  ++  I +H+G+  +LVNNAGIT+    L ++  + + V++ +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKAVLRGMTKARWGRIVNIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRG  176
             +S+AV+  M     G IV ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVAPGFIDTDMTREL-PEAQRNALLGQIPLGRLGQAGEIAQVVAFLASDGASYVTG  235
            I +N++APG+I+TD+T  L  + +R+A++  IPLGRLG A ++A+   FLASD +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

818) fabG in NC_012560


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 163/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAVVIGTATSSSGAESIAETLKSNGIEGAG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   A TL    +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LVLDVSSDESVATTLEHIQQHLGQPAILVNNAGITRDNLMLRMKDEEWHDVINTNLNSLY  118
            L  +V+ +  V  ++  I +H+G+  +LVNNAGIT+    L ++  + + V++ +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKAVLRGMTKARWGRIVNIGSVVGAMGNA--GQVNYAAAKAGLEGFSRALAREVGSRG  176
             +S+AV+  M     G IV ++SV +  G +  G  +Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVAPGFIDTDMTREL-PEAQRNALLGQIPLGRLGQAGEIAQVVAFLASDGASYVTG  235
            I +N++APG+I+TD+T  L  + +R+A++  IPLGRLG A ++A+   FLASD +SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

819) BYI23_B007530 in NC_016625


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 106/262 (41%), Positives = 172/262 (66%), Gaps = 17/262 (6%)

Query  1    MLLDNKVVVVTGGS--RGIGRAIALASAREGADVAINYWRDNDSSYGKASAVESIVGEIE  58
            MLL+ K+ ++TG++  RGIGRA A++ A++GA V I    D D S ++ +A         
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAA--------A  92

Query  59   ALGRRAIAVEGNVAERETGIELIARTVEAFGRVDVLSSNAGICPFHAFLDMPASVYETTV  118
            +LG   +++ +NVA+     + +A  +E FGR+DVL +NAGI      LD+ ++ Y+  +
Sbjct  93   TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVL  152

Query  119  AVNLNGAFYVAQAAANQMKAQGTGGAIVATSSISALVGGGM--QTHYTPTKAGVHSLMQS  176
             V+L G++ ++QA    M+AQG+ G+IV  SS+SA  GGG+    HY+++KAGV +L ++
Sbjct  153  DVSLRGTLLMSQAVIPTMRAQGS-GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKA  211

Query  177  CAIALGPYGIRCNSVMPGTIATDLNADDLADPGKRAYMEKRIPLGRLGAPDDVAQCVVFL  236
             A  +GP  IR NS+ PG I TD+ ++ + D  ++A +E  IPLGRLGA++DVA+  +FL
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFL  270

Query  237  ASDRARYVTGASLLVDGGLFVN  258
            ASD + Y+TG +L V+GG++++
Sbjct  271  ASDLSSYLTGITLDVNGGMLIH  292

820) Closa_1125 in NC_014376


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 102/253 (41%), Positives = 161/253 (64%), Gaps = 10/253 (3%)

Query  5    FKNKVALITGAGS--GMGLTTAREFAKNGASVVLADIIEEAVNTAAEQLVKDGHKAIAVC  62
            ++ K+A+ITGA+S  G+G +TA  FA++GA VV+ D+ E A   AA  L  +GH  +++ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGH--LGLA  102

Query  63   CDVSNEQQVKEMVDKTIKTFGHLDAAFNNAGIQVPMTDTADLAASDYDLVMGVNLRGVWL  122
             +V++E QVK+ V   I  FG++D   NNAGI  P+  T D+ ++DYD V++V+LRG  L
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIK-TLDIRPGDYDKVLDVSLRGTLL  161

Query  123  CMKYELLRMREQGSGTIV--NCSSlgglvggagraaYHAAKHGVLGLTKCAAIEYAPKGI  180
              +  +  MR QGSG+IV  +  S     G  G + Y AAK GVLGL K  A E++P  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  RINAVCPGTIDTPMVHSMIESGDLSKEEAISLMPIGRLGRQDEIADAVLWLSSQASSFVV  240
            RIN++ PG I+T +  ++++     ++  I  +P+GRLG  +++A+A L L+S+ SS++ 
Sbjct  222  RINSIAPGLIHTDITGGLMQDE--RRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  241  GQAISVDGGYTIQ  253
            G ++ V+GG  I+
Sbjct  280  GITLDVNGGMLIH  292

821) CE2778 in NC_004369


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 168/247 (69%), Gaps = 7/247 (2%)

Query  4    LNGRICIVTGAA--QGIGKGIAERLAAEGATVVVADLNGEAASATAAELGNDSIGVTVDI  61
            L+G+I I+TGAA  +GIG++ A  +A +GA VV+ DL+  AA  +AA LG++ +G++ ++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   SDRTAVDAMVAEAKDKYGRIDVLVNNAGWDKIGPFLEIEPEIWDRIININLYGTLHCSQS  121
            +D + V   VA   + +GRIDVLVNNAG  +    L+I P   D++++++L GTL  SQ+
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  122  VARIMVEQEGGGTIINIGSDAARVGSS--GEAVYSACKGGVVSFTKTLARELARYGVTAN  179
            V   M  Q G+G+I+ ++S +A+ G++  G + YSA K+GV+++ K++ARE++   +  N
Sbjct  166  VIPTMRAQ-GSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  AICPGPADTPLFAQISEENPKLRTALEKAIPLRRLAQPEDLANAVAFFASPESSYITGQT  239
            +I PG  +T + + + +++   R A+  +IPL RL+ ++D+ANA  F+AS  SSY+TG T
Sbjct  225  SIAPGLIHTDITGGLMQDER--RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  240  LSVSGGL  246
            L V+GG+
Sbjct  283  LDVNGGM  289

822) Dsui_2448 in NC_016616


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 178/251 (71%), Gaps = 8/251 (3%)

Query  1    MLQGQIALVTGAS--RGIGKAVALELARLGATVVGTATSDDGAGKISAYLAEAGAKGRGA  58
            +LQG+IA++TGA+  RGIG+A A+ +A+ GA VV     + +A   +A L+E G  G +A
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAA  103

Query  59   LLEVRDQAQVDALIAALEKEFGAVSILVNNAGITRDNLAMRMKDDEWDAVIDTNLKAVFR  118
              +V D++QV   +A++  +FG + +LVNNAGIT+   ++ ++ ++ D V+D +L++ + 
Sbjct  104  --NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  LSKAVMRGMMKARAGRIINITSVVGHAGNP--GQANYCAAKAGVSGMTRSLARELGSRNI  176
            +S+AV+  M    +G I+ ++SV ++ G    G ++Y AAKAGV G+ +++ARE+G+ +I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  177  TVNCVAPGFIDTDMTKAL-DDKQKEGLLGNIPLGRLGSPEDIaaavaflaspaaGYVTGS  235
             +N +APG+I+TD+T +L +D ++++++  IPLGRLG+++D+A A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  236  TIHVNGGMYMD  246
            T++VNGGM ++
Sbjct  282  TLDVNGGMLIH  292

823) fabG in NC_018268


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 102/253 (41%), Positives = 170/253 (68%), Gaps = 14/253 (5%)

Query  4    FDGRAAIVTGAGS--GIGRATALRLACEGAQVIMADTSELGLVDTGNLMPEGAEYLRRRV  61
            ++G+ AI+TGA+S  GIGRATA+ +A +GA+V++ D  E +  D++  + EG   L    
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG--HLGLAA  103

Query  62   DVADEAQVKKLVSDAMDAFGKIDILCNIAGIASTGKGHPPVIENERDEWDTVLAVNLIGT  121
            +VADE+QVK+ V+  ++ FG+ID+L N AGI+   K     ++   ++ D VL V+L GT
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIK----TLDIRPGDYDKVLDVSLRGT  159

Query  122  MLLIKHVAPHMQARKLGSIVNTASVAGIRSGA--GGNAYSASKAGVINLTMTAACDLGLH  179
            +L+ + V P M+A+  GSIV  +SV++ R+G+  GG  YSA+KAGV+ L  + A ++G +
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  180  NIRVNAVCPGLVETGMTKAVFDYARTNEKAHKLGARCELRRYGDPEEIAAAILFFASDDA  239
            +IR+N++ PGL++T++T ++ +    +E+ H +     L R G ++++A A LF+ASD +
Sbjct  220  QIRINSIAPGLIHTDITGGLMQ----DERRHAIIEGIPLGRLGAAQDVANAALFLASDLS  275

Query  240  SYITGQALPVDGG  252
            SY+TG +L V+GG
Sbjct  276  SYLTGITLDVNGG  288

824) fabG in NC_010067


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGARVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GARV+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

825) fabG in NC_008312


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 102/249 (41%), Positives = 164/249 (66%), Gaps = 14/249 (5%)

Query  11   LKGKVAIVTGAS--RGIGRATALALAMEGANVVV-NYAKSSDTaeevvaeivaaGGNGLA  67
            L+GK+AI+TGA+  RGIGRATA+++A +GA VV+ +   S+             G   L+
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-----GEGHLG  100

Query  68   LQADVSQVEEVDNLIKEVMEKWSRVDILVNNAGITRDTLLLRMKLEDWQSVIDLNLTGVF  127
            L A+V++  +V + +  ++E  +R+D+LVNNAGIT+    L ++  D + V+D++L G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  128  LCTRAVSKIMLKQKSGRIINVASVSGQMGNP--GQANYSAAKAGVIGFTKTVAKELANRG  185
            L ++AV   M  Q SG I+ ++SVS+Q G    G ++YSAAKAGV+G+ K++A+E++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  186  ITANVVAPGFIETDMTKDLKNSE---EIIKFIPLGRYGKPEEVAGMIRFLAADDAASYIT  242
            I  N +APG+I+TD+T +L + E    II  IPLGR G +++VA    FLA+ D +SY+T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLAS-DLSSYLT  279

Query  243  AQVFNVDGG  251
            +  ++V+GG
Sbjct  280  GITLDVNGG  288

826) Dalk_3307 in NC_011768


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  127 bits (466),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 96/233 (42%), Positives = 159/233 (69%), Gaps = 8/233 (3%)

Query  19   RAIALRFAGQGASVYFCHYDPDDSESEKTEKLLAEAGGQGKGFKVNVADKDEVKAFFKTL  78
            RA A+ FA +GA V +   D D+S +  +   L+E  G+  G+  NVAD  +VK    T+
Sbjct  64   RATAVTFAQHGARVVI--LDLDESAARDAAATLGE--GH-LGLAANVADESQVKQAVATI  118

Query  79   VQEAGRIDVLVNNAGVTKDGFAVRMKEQDWDLVVDINLKGTFFCTQEAARAMMKQKQGRI  138
            +++ GRIDVLVNNAG+T+   ++ ++  D D V+D++L+GT++ +Q    +M  Q  G I
Sbjct  119  IEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSI  178

Query  139  INISSVVGAMGNP--TQANYAASKAGVIGLTKAVAKELASRGILVNAVAPGYINTQMT-D  195
            + +SSV +  G      ++Y+A+KAGV+GL KA+A+E+++  I +N++APG I+T++T +
Sbjct  179  VCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGG  238

Query  196  ILSDEVKQAFIDATPLGKMGEPEDVAAAVEFLASENSRYITGQVLHVNGGMYM  248
            ++ DE ++A+I++ PLG++G ++DVA A  FLAS+ S Y+TG  L+VNGGM +
Sbjct  239  LMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

827) fabG in NC_021500


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  127 bits (465),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSESGAQAISDYLGANGKGLVL  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     ES+A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKEDEWNDILDTNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

828) bbsD in NC_006513


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  127 bits (465),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 158/248 (64%), Gaps = 9/248 (3%)

Query  1    MGIQNRVALVTGSAS--GMGKQTALRFAERGAAVVINDIDAEKVRTTVDEFSRLGHRVLG  58
            M +Q ++A++TG+AS  G+G+ TA+ FA++GA VVI D+D    R +    + LG+  LG
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA---ATLGEGHLG  100

Query  59   TVADISNKAAVDGMVQQTVEAFGRIDILVNNAGMERAGALRKLSEADWDITVDVNLKGTF  118
              A++++ + V   V   +E FGRID+LVNNAG+ ++     +  +D D  +DV+L+GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  LCTQAVHGHMVENKHGRIV--NIASRAWLGGA-GQTPYSSAKAGVVGMTRALAIELGRSG  175
            L +QAV   M  +  G IV  +  S  + GG  G   YS+AKAGV+G+ +A+A E+G   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  ITVNCVAPGLIHTPMWEELPEKD-RNFLLSRQPTGKLGEPDDIANTLLFLADDDTGFVTG  234
            I +N +APGLIHT +   L + + R+ ++   P G+LG ++D+AN+ LFLA D ++++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  235  QVLYVCGG  242
              L V GG
Sbjct  281  ITLDVNGG  288

829) Pat9b_1482 in NC_014837


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  127 bits (466),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 100/244 (41%), Positives = 172/244 (71%), Gaps = 5/244 (2%)

Query  3    FEGKVALVTGAS--RGIGRAIAETLAARGAKVVGTATSESGAEAISAYLGDSGKGLLLNV  60
            ++GK+A++TGA+  RGIGRA A T+A +GA+VV     ES+A   +A LG++  GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  61   TDAASIESVLEKVRAEFGEVDILVNNAGITRDNLLMRMKDDEWADILDTNLTSVFRLSKA  120
            +D + +   +  +  +FG +D+LVNNAGIT+    + ++ ++   +LD +L + + +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  121  VMRAMMKKRVGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITVNV  178
            V+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  179  VAPGFIETDMTRAL-NEDQRSGILAEVPAGRLGDPQEIANAVAFLASDEAAYITGETLHV  237
            +APG+I+TD+T +L ++++R +I+  +P GRLG +Q++ANA  FLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  238  NGGM  241
            NGGM
Sbjct  286  NGGM  289

830) CFPG_495 in NC_011565


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  127 bits (464),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 106/252 (43%), Positives = 170/252 (68%), Gaps = 11/252 (4%)

Query  1    MKLLEGKTAIVTGAA--RGIGKSIATGFAMEGCNIAFTDLIIDENVETTVKEIQD-LGVR  57
            + LL+GK AI+TGAA  RGIG++ A  FA +G  + + DL      E++ ++    LG  
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL-----DESAARDAAATLGEG  97

Query  58   VKGYASDASNFGDTHKIMNAIVEDFNHIDILVNNAGITRDSLMMRMTEQQWDLVLKINLK  117
              G A++ ++ ++  + + +I+E+F +ID+LVNNAGIT+    + +   + D VL ++L+
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  118  SAFNFINALAPIMIKQKsgsiinissvvgLHGNV--GQANYSASKAGMIGLIKSVARELG  175
            +++   +A+ P M  Q SGSI+ +SSV + +G    G ++YSA+KAG++GL K++ARE+G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  SRGIRANVIAPGFIATEMTHKL-SEEVQNKWIKQIPLRRAGTPKDVSNIALFLASDLSSY  234
            +  IR N IAPG+I T++T  L  +E ++  I  IPL R G+++DV+N ALFLASDLSSY
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VTGQVIQVDGGM  246
            +TG  ++V+GGM
Sbjct  278  LTGITLDVNGGM  289

831) Fleli_3958 in NC_018018


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  127 bits (464),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 102/253 (41%), Positives = 165/253 (66%), Gaps = 15/253 (5%)

Query  3    LLSGKNVLITGAS--RGIGRAMAERFAEEGANVGFTYLSSVEKGEALQKELSEKGTTIKG  60
            LL GK  +ITGA+  RGIGRA A  FA++GA V +  L      +A    L+E    + +
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDA-AATLGEGHLGLAA  103

Query  61   YRSDASDFKAAEELVTDFVKDFGSLDVLVNNAGITRDNLLMRMSEDQWDEVMKVNLKSVF  120
              +D S+ K A   V+ ++ +FG +DVLVNNAGIT+    + +  ++ D V+ V+L++ +
Sbjct  104  NVADESQVKQA---VATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NLVKASTRTFLKQRQGSIINVTSVVGIKGNA--GQANYAASKAGIIGFTKSIALELGSRN  178
             + +A   T   Q  GSI+ ++SV + +G +  G ++Y+A+KAG++G+ K++A E+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRCNAIAPGFIETEMTDQLDEKMIAEWKSA----IPLRRAGSAKEVADVTIFLASDYSKY  234
            IR N+IAPG+I+T++T+ L   M  E++ A    IPL R G+A++VA+ ++FLASD S Y
Sbjct  221  IRINSIAPGLIHTDITGGL---MQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VTGQVLQVDGGML  247
            +TG  L+V+GGML
Sbjct  278  LTGITLDVNGGML  290

832) fabG in NC_013892


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 174/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFDGKIALVTGAS--RGIGRSIAELLVERGARVIGTATSENGAEAISAYLGDKGKGFVL  58
            M ++GKIA++TGA+  RGIGR+ A  + ++GARV+     E++A   +A LG+   G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSESVEKTLSNIRAEFGEIDILVNNAGITRDNLLMRMKDGEWQDIIDTNLSSIFRLS  118
            NV+D   V ++++ I  +FG ID+LVNNAGIT+    + ++ G+ + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRSMMKKRYGRIISIGSVVGTMgna--gqanyaaakagVIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +  G ++Y+AAKAGV+G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRVGILSEIPASRLGDAKEIASAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  IP +RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

833) fabG in NC_005966


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 163/248 (66%), Gaps = 11/248 (4%)

Query  4    QRKVALVTGAS--RGIGAAIAEQLIQDGFFVVGTATSESGAEKLAAQYGEQGTGLVLDVR  61
            Q K+A++TGA+  RGIG A A  + Q+G  VV     ES+A   AA  GE   GL  +V 
Sbjct  47   QGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVA  106

Query  62   HLDEIEAVVTTIEQNYGPVLVLVNNAGITRDNLLLRMSEDDWDDILNIHLKAVYRLSKRV  121
            +  ++   V+TI +++G + VLVNNAGIT+    L +  +D D +L++ L++   +S+ V
Sbjct  107  DESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAV  166

Query  122  LKGMTKARFGRIINISSVVAH-----FANPGQANYSAAKAGIEAFSRSLAKEMGSRQITV  176
            +  M     G I+ +SSV A+     F+ P   +YSAAKAG+ ++++++A+E G+ QI +
Sbjct  167  IPTMRAQGSGSIVCMSSVSAQRGGGIFGGP---HYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NSVAPGFIATEMTDALSEDLRKK-MSDQVALGRLGEPQDIANAVSFLASEKASYITGTVL  235
            NS+APG+I T++T++L +D R+  + + ++LGRLG +QD+ANA  FLAS+ +SY+TG  L
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGLYM  243
            +VNGG+ +
Sbjct  284  DVNGGMLI  291

834) Clopa_0961 in NC_021182


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 165/251 (66%), Gaps = 9/251 (3%)

Query  6    LTDKIALITGGT--RGLGRAIaeklakekvkvvvTGINEERAKQVANEISLAYNVETLGL  63
            L +KIA+ITG++  RG+GRA A  +A++  +VV+ +++E  A++ A  ++ +     LGL
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH----LGL  101

Query  64   KHDVSSEESTKEVVKAILENFKRIDILVNNAGITSDGIMMMMKKEKWDKVISVNLTGAFN  123
              +V+ E   K+ V +I+E+F RID+LVNNAGIT     + ++    DKV+ V+L G++ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  124  CTKFVSKHMLKQKSGSIVNITSVVGITGNV--GQANYSASKAGLIGFTKTVARELADRGI  181
             ++ V   M  Q SGSIV ++SV +  G    G ++YSA+KAG++G+ K++ARE++   I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  182  TVNAIAPGYISTDMTSTL-SDKTTEEILSKIPMKTYGKPEAVANAVLFLVSNMSQYITGQ  240
             +N+IAPG I TD+T+ L  D   + I+  IP+   G ++ VANA LFL S++S Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  241  VINVDGGMVMY  251
             ++V+GGM++ 
Sbjct  282  TLDVNGGMLIH  292

835) fabG in NC_014306


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 103/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVVGTATSQSGADAISAYLGTNGKGLLL  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+VV     +S+A   +A LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSASIDAVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRVGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRALTEDQ-RAGILAEVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L +D+ R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

836) Ssed_3534 in NC_009831


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 163/252 (65%), Gaps = 13/252 (5%)

Query  1    MLANKVCIVTGGA--QGIGRCIVETFAKQGALKVYACDMNHEAMVDLETQYSNVC-AKQL  57
            +L  K+ I+TG+A  +GIGR    TFA++GA +V   D+++ A  D  +  ++   +   
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGA-RVVILDLDESAARDAAATLGEGHLGLAA  103

Query  58   NVCDRDAIKMLVAELKEVHGNIDVLVNNAGITRD-NLLDRMSEDDWDMVVNVNLKGVFNM  116
            NV D   +K  VA + E  G IDVLVNNAGIT+  + LD +  +D D V++V+L+G + M
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD-IRPGDYDKVLDVSLRGTLLM  162

Query  117  TQAVSPVMIESGVGSIITMSSVVGTDGNV--GQSNYAATKGGVITMTKGWAKEFARKGAQ  174
            +QAV P M   G GSI+ MSSV +  G    G ++Y+A+K+GV+ + K+ A+EF+    Q
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP--DQ  220

Query  175  VRANCVAPGFIETPMTIEL--PEKVLDYMKGKTPLGRMGKPQDIADGVLFLASDQASFIT  232
            +R N +APG+I+T +T  L   E+    + G  PLGR+G +QD+A++ LFLASD +S++T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  233  GQTLKIDGGLVI  244
            G TL ++GG++I
Sbjct  280  GITLDVNGGMLI  291

837) fabG in NC_008309


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 98/244 (41%), Positives = 161/244 (66%), Gaps = 6/244 (2%)

Query  1    MQGKIALVTGAT--RGIGRAIAEELASKGAFVIGTATSEKGAESISAYLGKQGKGLVLNV  58
            +QGKIA++TGA+  RGIGRA A  +A  GA V+     E +A   +A LG    GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   ADQDSIDAVLSAIKAEVGDVEILVNNAGITRDGLLMRMKDDDWFDIMQTNLTSIYRLSKA  118
            AD+  +   +++I  + G +++LVNNAGIT+    + ++ +D   +++ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VLRPMMKKG-GRIINIGSVVGSMGNP--GQTNYCAAKAGVIGFTKSLAKEVAARGVTVNV  175
            V+  M  +G G I+ ++SV +  G    G  +Y AAKAGV+G+ K++A+E ++  + +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  176  VAPGFIATDMT-DVLTDEQKANILTNVPAGRLGQPKDIAKAVAFLASEDASYITGTTLHV  234
            +APG+I TD+T +++ DE++  I+  +P GRLG ++D+A+A  FLAS+ +SY+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  235  NGGM  238
            NGGM
Sbjct  286  NGGM  289

838) Metme_1089 in NC_015572


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 163/246 (67%), Gaps = 5/246 (2%)

Query  1    MDKKLAIVTGAS--RGIGRAIAEKLVTDGFFVVGTATSDSGAEAISAYLGENGKGYKLNV  58
            ++ K+AI+TGA+  RGIGRA A  +  +G  VV     +S+A   +A LGE   G   NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   ADAADIENFIKTTGDAHGTPAVLVNNAGITRDNLLMRMKDEEWDDIISTNLTSVFRMSKA  118
            AD +++ + + T  +  G   VLVNNAGIT+    + ++  + D ++  +L + + MS+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VLRGMMKVRYGRIINISSVVGSTGNA--GQTNYAAAKAGMVGFAKSMAKEVGSRGITVNT  176
            V+  M     G I+ +SSV +  G +  G  +Y+AAKAG++G++K+MA+E G+  I +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  177  VAPGFIDTDMTKEL-SDDIKNALLGSIALGRLGRPEEIAHAVSFLASEHASYITGETLHV  235
            +APG+I+TD+T  L  D+ ++A++ +I+LGRLG ++++A+A  FLAS+ +SY+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  236  NGGMYM  241
            NGGM +
Sbjct  286  NGGMLI  291

839) fabG in NC_015761


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

840) A464_1129 in NC_021870


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

841) fabG in NC_021820


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

842) fabG in NC_011149


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

843) fabG in NC_021844


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

844) SBOV11151 in NC_022241


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

845) fabG in NC_021818


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

846) fabG in NC_011205


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

847) fabG in NC_011294


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

848) fabG in NC_011274


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

849) fabG in NC_022221


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

850) fabG in NC_016831


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

851) fabG in NC_021810


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

852) SU5_01821 in NC_017623


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

853) fabG in NC_021812


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

854) fabG in NC_011083


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

855) fabG in NC_020307


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

856) fabG in NC_011080


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

857) SN31241_22630 in NC_021902


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

858) fabG in NC_011147


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

859) fabG in NC_006511


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

860) fabG in NC_012125


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIKTDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

861) fabG in NC_021984


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

862) fabG in NC_011094


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

863) STY1234 in NC_003198


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

864) fabG in NC_016856


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

865) fabG in NC_017046


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

866) STMMW_12041 in NC_016854


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

867) fabG in NC_003197


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

868) fabG in NC_016810


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

869) fabg in NC_016857


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

870) fabG in NC_016860


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

871) fabG in NC_021151


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

872) fabG in NC_016863


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

873) fabG in NC_021814


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

874) STBHUCCB_18340 in NC_016832


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

875) fabG in NC_021176


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

876) fabG in NC_004631


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E++A++ +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

877) Spiaf_0248 in NC_017098


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (463),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 170/249 (69%), Gaps = 9/249 (3%)

Query  8    LLENKIALVTGGS--RGIGKDIVLKLAAQGASVYYLSQSEGPHADEFATAASENGVFITH  65
            LL+ KIA++TG++  RGIG+   + +A +GA V  L   E++  D  AT +  +  + ++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  66   KQGSVADAERVDAVVKEILDESEGVDILINNAGITRDGLIMRMSNEDWQQVLDINLTGTF  125
                VAD  +V   V  I+++   +D+L+NNAGIT+    + +   D ++VLD++L GT+
Sbjct  105  ----VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  126  YLCRALTRSMLrrrsgsiinvssivgligNG--GQTNYSASKAGMIGFTKSLAREISSRG  183
             + +A+  +M  + SGSI+ +SS+ +  G G  G  +YSA+KAG++G+ K++ARE+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  184  VRANVIAPGFIRTDMTDKL-SDEQKEALQEQIPLGRIGDSSEIADAAVFLASDMSSYITG  242
            +R N IAPG+I+TD+T+ L  DE+++A+ E IPLGR+G + ++A+AA+FLASD+SSY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  243  QVLEVTGGL  251
              L+V GG+
Sbjct  281  ITLDVNGGM  289

878) HMPREF0669_00317 in NC_022111


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (462),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 107/249 (43%), Positives = 171/249 (69%), Gaps = 9/249 (3%)

Query  3    LLTGKTALVTGAA--RGIGKAIALRFAAEGANVAFTDLVIDENGKQTEEELLALGVKAKG  60
            LL GK A++TGAA  RGIG+A A+ FA +GA V + DL  DE++ +      +LG    G
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDL--DESAARDAAA--TLGEGHLG  100

Query  61   YASNAADFEQSAQVVNQVKEEFGSIDILVNNAGITKDGLMLRMTEAQWDAVIGVNLKSAF  120
             A+N AD  Q  Q V  + E+FG ID+LVNNAGIT+    L +  ++ D V++V+L++++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  NFIHACTPIMMRQRGGSIINMASVVGVHGNA--GQANYaaskaamialaksVAQEMGPKG  178
               +A  P M  Q +GSI+ M+SV + +G +  G ++Y+A+KA++++L+K++A+E GP  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  VRANAIAPGFIDTAMTQALSDEVRKEWTSK-IPLRRGGTVEDIASCALFLASDMSSYISG  237
            +R N+IAPG+I+T +T +L ++ R++     IPL R G+ +D+A+ ALFLASD+SSY++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  QVIQVDGGM  246
              ++V+GGM
Sbjct  281  ITLDVNGGM  289

879) fabG in NC_022269


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (462),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     E++A   +  LGE   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDIESIEATLKTINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRM  118
             NV+D   +  ++ TI ++FG ID+LVNNAGIT+    + ++ ++ + +++ +L     M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRAGRIINVGSVVGTMgnag--qanyaaakagVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +    ++Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRAATLSNVPAGRLGDPREIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

880) fabG in NC_009783


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (462),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 171/247 (70%), Gaps = 5/247 (2%)

Query  1    MMNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLA  58
            +M L+GKIA++TGA+  RGIGRA A  + ++GA V+     E++A   +  LGE   GLA
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  59   LNVTDIESIEATLKTINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRM  118
             NV+D   +  ++ TI ++FG ID+LVNNAGIT+    + ++ ++ + +++ +L     M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SKAVLRGMMKKRAGRIINVGSVVGTMgnag--qanyaaakagVIGFTKSMAREVASRGVT  176
            S+AV+  M  + +G I+ ++SV +  G +    ++Y+AAKAGV+G+ K+MARE ++  + 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNTVAPGFIETDMTKAL-NDDQRAATLSNVPAGRLGDPREIASAVVFLASPEAAYITGET  235
            +N++APG+I+TD+T +L +D++R A +  +P GRLG ++++A+A +FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  LHVNGGM  242
            L+VNGGM
Sbjct  283  LDVNGGM  289

881) fabG in NC_016613


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (461),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 104/246 (43%), Positives = 170/246 (70%), Gaps = 5/246 (2%)

Query  1    MNLEGKIALVTGAS--RGIGRAIAELLVERGATVIGTATSESGAAAISEYLGENGKGLTL  58
            M L+GKIA++TGA+  RGIGRA A  + ++GA V+     ES+A   +  LGE   GL+ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDVESIEAALKTINDEFGVIDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTPIFRMS  118
            NV+D   +  A+ TI ++FG ID+LVNNAGIT+    + ++ ++ + ++D +L   + MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRGMMKKRAGRIINVGSVVGTMgnag--qanyaaakagVIGFTKSMAREVASRGVTV  176
            +AV+  M  + +G I+ ++SV +  G +    ++Y+AAKAGV+G+ K+MARE ++  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NTVAPGFIETDMTKAL-NDEQRAATLSNVPAGRLGDPREIASAVAFLASPEAAYITGETL  235
            N++APG+I+TD+T +L +DE+R A +  +P GRLG ++++A+A  FLAS  ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

882) fabG in NC_010694


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (461),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 173/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVVGTATSQSGADAISSYLGDNGKGLLL  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+VV     +S+A   ++ LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASIESVLENIRSEFGEVDILVNNAGITRDNLLMRMKDDEWLDILDTNLTSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++   +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRAGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            +AV+ +M  + +G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SEDQRAGILAEVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

883) D782_2651 in NC_020063


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (461),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSESGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     ES+A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

884) fabG5 in NC_017542


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (462),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 164/248 (67%), Gaps = 9/248 (3%)

Query  5    LSGKTALVTGAS--RGIGRSIalalaeaganvavnYAGSEAAATEVAELIRAKGVEAITV  62
            L GK A++TGA+  RGIGR+ A+++A+ GA V +   +  AA    A L    G   + +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  63   QANVGRAEEADQLIKDVIGAWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFN  122
             ANV+   +  Q +  +I   G+ID+LVNNAGIT+    + ++  ++D+V++ +L+G + 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  CLKAATRPMMKQRSGRIINISSVVGVLGNA--GQANYVAAKAGVIGLTKSSARELASRGI  180
              +A    M  Q SG I+ +SSV +  G +  G ++Y AAKAGV+GL K+ ARE+++  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  TVNCVAPGFIDTEMTQ-VLADDLRDNMLSGIPLARLGRPEEIADVVLFLASDASSYMTGQ  239
             +N +APG+I+T++T  ++ D+ R+ ++ GIPL+RLG ++++A+  LFLASD SSY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  TLHVDGGM  247
            TL+V+GGM
Sbjct  282  TLDVNGGM  289

885) PPSC2_c2051 in NC_014622


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (462),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 164/248 (67%), Gaps = 9/248 (3%)

Query  5    LSGKTALVTGAS--RGIGRSIalalaeaganvavnYAGSEAAATEVAELIRAKGVEAITV  62
            L GK A++TGA+  RGIGR+ A+++A+ GA V +   +  AA    A L    G   + +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHLGL  101

Query  63   QANVGRAEEADQLIKDVIGAWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFN  122
             ANV+   +  Q +  +I   G+ID+LVNNAGIT+    + ++  ++D+V++ +L+G + 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  CLKAATRPMMKQRSGRIINISSVVGVLGNA--GQANYVAAKAGVIGLTKSSARELASRGI  180
              +A    M  Q SG I+ +SSV +  G +  G ++Y AAKAGV+GL K+ ARE+++  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  TVNCVAPGFIDTEMTQ-VLADDLRDNMLSGIPLARLGRPEEIADVVLFLASDASSYMTGQ  239
             +N +APG+I+T++T  ++ D+ R+ ++ GIPL+RLG ++++A+  LFLASD SSY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  TLHVDGGM  247
            TL+V+GGM
Sbjct  282  TLDVNGGM  289

886) P700755_003869 in NC_018721


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  126 bits (461),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 171/255 (68%), Gaps = 15/255 (5%)

Query  7    SMKLLDKKNVIITGGS--RGIGKGIAEIFAQHGANVAFTYNSSSSSAKELEDHLKTFGVI  64
            ++ LL+ K  IITG++  RGIG++ A  FAQHGA V +  +   S+A++      T+G  
Sbjct  42   PLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAA---TLGEG  97

Query  65   AKAYQSDASDFEQAQKLADEVIKDFGGIDVLINNAGITKDNLLMRMSEDDFDKVIKVNLN  124
              +  ++ +D  Q ++    +I +FG IDVL+NNAGIT+    + +  +D+DKV+ V+L 
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  125  SVFNLTKAVLRPMLKQRHgsiinissvvgiKGNP--GQANYSASKAGIIGFSKSVALELG  182
            + + +++AV+  M  Q  GSI+ +SSV + +G    G ++YSA+KAG++G++K++A E+G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  183  SRNIRSNVVAPGFIETEMTEKLDEKTVEGWRQA----IPLKRGGKPEDIANACVFLASDM  238
            + +IR N +APG+I+T++T  L +   + +R+A    IPL R G ++D+ANA +FLASD+
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQ---DERRHAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  239  STYITGQTLSVDGGM  253
            S+Y+TG TL V+GGM
Sbjct  275  SSYLTGITLDVNGGM  289

887) fabG in NC_009792


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (459),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKVALVTGAS--RGIGRAIAETLVARGAKVIGTATSENGAQAISEYLGANGKGLML  58
            M ++GK+A++TGA+  RGIGRA A T+  +GA+V+     E++A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDILETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +L+ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

888) Mesau_04464 in NC_019973


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (459),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 102/250 (41%), Positives = 167/250 (67%), Gaps = 13/250 (5%)

Query  5    LEGKVALIVGGA--RGIGKGIALRFAEEGARLVLADSETEAGLASADELGVPFI--RTDI  60
            L+GK+A+I G+A  RGIG++ A+ FA++GAR+V+ D +  A+  +A  LG   +   +++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  61   SQMSDAEAAVALSLKHHGRLDIIVQNAGIYPWQLIENTSADDWDRVMAVNLRGTFNASRA  120
            ++ S+   AVA  + H GR+D++V+NAGI       +  ++D D+V+ V+LRGT+  S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  121  ALVPMKAQRFGRMLYTSSITGPHVTSP-GHGHYSATKAGINGFIRAAALEFSGYGITVNG  179
             +  M+AQ  G ++  SS+++ +  +  G  HYSA+KAG+ G+ +A A EF+   I +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  180  VEPGNILTEA----IQEHRGAAYIKNMEDSIPLGRLGSPRDVANAFLFLASDDASYITGT  235
            + PG I T+     +Q++R  A I    ++IPLGRLG+++DVANA LFLASD +SY+TG 
Sbjct  226  IAPGLIHTDITGGLMQDERRHAII----EGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  236  TIVVDGGQLL  245
            T+ V+GG L+
Sbjct  282  TLDVNGGMLI  291

889) MAB_4680c in NC_010397


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 103/250 (42%), Positives = 165/250 (66%), Gaps = 17/250 (6%)

Query  7    LLQGKNVIVTGGA--RGLGAAFSRHIVSQGGRVVIADVLDGDGRQLAAELGDAARFTHL-  63
            LLQGK  I+TG+A  RG+G A +  +  +G+RVVI D+ ++ +R+ AA LG++    HL 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HLG  100

Query  64   ---DVTDAEQWRELIDTTLAGFGTITGLVNNAGISSAAMVADEPLEHFRKVIEINLVGVF  120
               +V+D  Q ++ + T +  FG I  LVNNAGI+ +    D    ++ KV++++L G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  IGMQAVIPAMRAHGCGSIVNISSAAGLVGLALTSG--YGASKWGVRGLSKVAAIELGRER  178
            +  QAVIP+MRA+G GSIV +SS ++  G ++ +G  Y+A+K GV GL+K  A E+G ++
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNSVHPGVIYTPMTAKEGFREGEGNMPI---AAMGRVGNADEVAGAVAYLLSDAASYV  235
            IR+NS+ PG+I T +T+  G+ ++E   +I    ++GR+G A++VA A  +L SD +SY+
Sbjct  221  IRINSIAPGLIHTDITG--GLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGAELAVDGG  245
            TG  L V+GG
Sbjct  279  TGITLDVNGG  288

890) fabG in NC_016745


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 172/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFSGKVVLVTGAS--RGIGRATAELFAERGATVIGTATSDKGAEAISAYLGDKGTGLVL  58
            M + GK+ ++TGA+  RGIGRATA  FA++GA V+     + +A   +A LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASLEATLATIKERFGDIDVLVNNAGITRDNLMMRMKDEEWQDIIDTNLTSVFRLS  118
            NV+D + +  ++ATI E+FG IDVLVNNAGIT+    + ++  + + ++D +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRSMMKKRFGRIVTIGSVVGTMgnag--qanyaaakagLIGFSKSLGREVASRGITV  176
            +AV+ +M  +  G IV ++SV +  G +    ++Y+AAKAG++G++K+++RE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-NDEQRAGILSQVPAQRLGDPKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L +DE+R +I+  +P  RLG ++++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

891) fabG in NC_004547


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSEKGAEAISSWLGENGKGYML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E +A   ++ LGE   G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVADAASVESVLAEIRAEFGEIDILINNAGITRDNLLMRMKDDEWHDILDTNLTSVFRMS  118
            NVAD + V   +A I  +FG ID+L+NNAGIT+    + ++ ++ + +LD +L + + MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTQAL-TEEQRAGILTSVPANRLGDAKEIASAVVFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+ ++P  RLG A+++A+A +FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

892) BBta_0940 in NC_009485


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 105/260 (41%), Positives = 176/260 (68%), Gaps = 17/260 (6%)

Query  4    LKGKVAMVVGAGSIGPGWGNGKATAVTFARQGAKVFCVDRNGDAAAETASIISGEGGQAE  63
            L+GK+A++ GA+S    +G G+ATAVTFA++GA+V  +D +  AA ++A+ + GEG  + 
Sbjct  46   LQGKIAIITGAAS---ERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGHLG-  100

Query  64   AFTADVSKAAEVEAMVKACLAAFGRIDVLDNNVGIAEMGSVVDVEEAEWDRVFAVNLKSA  123
             ++A+V+  ++V   V + +  FGRIDVL NN GI++    +D+  ++ D+V+ V+L+++
Sbjct  101  -LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  124  YFAMKHVIPVMigqgggsiinissvasiRQVGI-SYVSYGASKAAMNQMTRTTAVEFAPR  182
             +  + VIP M +QG+GSI+ +SSV++ R  GI +   Y+A+KA++  + ++ A EF+P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  183  HVRVNAILPGLMKTPMVEHSAGLAASYAKGDVEEMWKKRDAQVPMGHMGDAFDVANAALF  242
            ++R+N+I PGL+ T +   ++GL         +E +      +P+G++G A DVANAALF
Sbjct  220  QIRINSIAPGLIHTDI---TGGLMQ-------DERRHAIIEGIPLGRLGAAQDVANAALF  269

Query  243  LASDESRYVTGITLVVDGGL  262
            LASD S Y+TGITL V+GG+
Sbjct  270  LASDLSSYLTGITLDVNGGM  289

893) Cseg_2740 in NC_014100


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 103/255 (41%), Positives = 168/255 (66%), Gaps = 10/255 (3%)

Query  1    MLLKDKVVLVTGAS--QGIGKAAAIGCAQHGADVAINYHSDEAGAADAVAQIEALGRRAI  58
            MLL++K+ ++TGA+  +GIG+A+A+  AQHGA V I  + DE++A DA A   +LG   +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAA---TLGEGHL  99

Query  59   AVKGDVAQVETAGAFVEAAVDAFGKVDVFVNNAGICPFHAFLDMPPEVMERTMKVNLFGA  118
            ++ ++VA+       V + ++ FG++DV+VNNAGI      LD+ P   ++ + V+L G+
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  YYMVQAAANQMVKQGHGGAIIAVSSISALVGGGM--QTHYTPTKAGVHSLMQSTAIALGK  176
              M QA    M  QG +G+I+ +SS+SA  GGG+    HY+++KAGV +L ++ A  +G 
Sbjct  160  LLMSQAVIPTMRAQG-SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  HGIRCNSVLPGTIETAINKEDLADVAKREYMAGRIPLGRLGEPDDLAGPIVFLASDLAKY  236
            + IR NS+ PG I+T I   +L +  +R+ +   IPLGRLG ++D+A + +FLASDL+ Y
Sbjct  219  DQIRINSIAPGLIHTDIT-GGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  237  VTGAALLVDGGAFVN  251
            +TG +L V+GG +++
Sbjct  278  LTGITLDVNGGMLIH  292

894) fabG in NC_009778


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSESGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     ES+A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAEVPAGRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

895) fabG in NC_017933


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSESGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     ES+A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAEVPAGRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

896) fabG in NC_020260


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSESGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     ES+A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAEVPAGRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

897) fabG in NC_013282


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLAARGAKVIGTATSESGAQAISDYLGANGKGLML  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA+V+     ES+A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASIESVLENIRSEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLS  118
            NV+D + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +++ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAEVPAGRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

898) fabG in NC_017910


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKVALVTGAS--RGIGRAIAETLAARGAKVIGTATSEKGAQAISEYLGAHGKGLML  58
            M ++GK+A++TGA+  RGIGRA A T+A +GA+V+     E +A+  +  LG    GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTEPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDILETNLSSVFRLS  118
            NV++ + +   +  I  +FG +D+LVNNAGIT+    + ++ ++ + +L+ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRHGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P GRLG+AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

899) A225_4873 in NC_018106


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 164/252 (66%), Gaps = 12/252 (4%)

Query  1    MKLASKTAIVTGAA--RGIGFGIAQVLAREGARVIIAD-RDTHGEAAAASLRESGAQALF  57
            M L +K AI+TGAA  RGIG + A  +A++GARV+I D  ++ +  AAA+L   G   L 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLG  100

Query  58   ISCNIGEKAQVEALFSQAEEAFGPVDIVVNNAGINRDAMLHKLSEADWDTVIDVNLKGTF  117
            ++ N+++ +QV    +   E FG +D++VNNAGI +      +  +D D V+DV+L+GT+
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  LCMQQAAIR-MRERGAGRII--NIASASWLGNV-GQTNYSASKAGVVGMTKTACRELAKK  173
            L M QA I  MR +G+G I+  +  SA + G + G  +YSA+KAGV+G+ K+  RE++  
Sbjct  161  L-MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  174  GVTVNAICPGFIDTDMTRGV-PENVWQIMINKIPAGYAGEAKDVGECVAFLASDGARYIN  232
             + +N+I PG+I+TD+T G+  ++ ++ +I+ IP G  G A+DV++   FLASD + Y+ 
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  233  GEVINVGGGMVL  244
            G  ++V GGM++
Sbjct  280  GITLDVNGGMLI  291

900) fabG in NC_013956


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 104/255 (41%), Positives = 181/255 (71%), Gaps = 7/255 (2%)

Query  2    HRNKRK--IMSFEGKVALVTGAS--RGIGRAIAETLAARGAKVVGTATSQSGADAISDYL  57
            H+N+++  +M ++GK+A++TGA+  RGIGRA A T+A +GA+VV     +S+A   +  L
Sbjct  35   HKNNQRTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL  94

Query  58   GDKGQGLLLNVTDAASVNSVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDT  117
            G+   GL  NV+D + V+  +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD 
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDV  154

Query  118  NLTSVFRLSkavmrammkkrmGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAR  175
            +L + + +S+AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++AR
Sbjct  155  SLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAR  214

Query  176  EIASRGITVNVVAPGFIETDMTRAL-NEDQRSGILAEVPAGRLGEAQEIANAVAFLASDE  234
            E+++  I +N +APG+I+TD+T +L ++++R +I+  +P GRLG AQ++ANA  FLASD 
Sbjct  215  EFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  235  AAYITGETLHVNGGM  249
            ++Y+TG TL+VNGGM
Sbjct  275  SSYLTGITLDVNGGM  289

901) SerAS12_1851 in NC_015566


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKVVLVTGAS--RGIGRAIAESFVARGAKVIGTATSESGAEAISSYLGASGKGFAL  58
            M ++GK+ ++TGA+  RGIGRA A +F  +GA+V+     ES+A   ++ LG +  G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDAQSIDSVLASIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV D   +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

902) SerAS13_1852 in NC_017573


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKVVLVTGAS--RGIGRAIAESFVARGAKVIGTATSESGAEAISSYLGASGKGFAL  58
            M ++GK+ ++TGA+  RGIGRA A +F  +GA+V+     ES+A   ++ LG +  G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDAQSIDSVLASIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV D   +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

903) fabG4 in NC_021591


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKVVLVTGAS--RGIGRAIAESFVARGAKVIGTATSESGAEAISSYLGASGKGFAL  58
            M ++GK+ ++TGA+  RGIGRA A +F  +GA+V+     ES+A   ++ LG +  G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDAQSIDSVLASIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV D   +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

904) SerAS9_1851 in NC_015567


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKVVLVTGAS--RGIGRAIAESFVARGAKVIGTATSESGAEAISSYLGASGKGFAL  58
            M ++GK+ ++TGA+  RGIGRA A +F  +GA+V+     ES+A   ++ LG +  G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDAQSIDSVLASIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV D   +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

905) fabG in NC_021659


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKVVLVTGAS--RGIGRAIAESFVARGAKVIGTATSESGAEAISSYLGASGKGFAL  58
            M ++GK+ ++TGA+  RGIGRA A +F  +GA+V+     ES+A   ++ LG +  G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDAQSIDSVLASIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV D   +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

906) fabG in NC_009832


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKVVLVTGAS--RGIGRAIAETFVARGAKVIGTATSESGAEAISSYLGASGKGFAL  58
            M ++GK+ ++TGA+  RGIGRA A TF  +GA+V+     ES+A   ++ LG +  G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDAQSIDSVLASIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILNTNLTSVFRLS  118
            NV D   +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + +L+ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

907) M634_20145 in NC_021821


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 162/246 (66%), Gaps = 12/246 (4%)

Query  4    GKVAVVTGAA--RGIGQAICEQLLEDGFHVVGLDIS-PLEWSQSAQLSSYQVNLC----D  56
            GK+A++TGAA  RGIG+A    + ++G +VV LD+  +  +  +A L+  ++ L     D
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  57   AAAVSEVVDSIVEQHGRIDALVNNAGITRDALLPDMLEQDWDSVIDVNLKAVFLLTQRVA  116
             + V + V +I+E+ GRID LVNNAGIT+     D+   D D V+DV+L++ +L++Q V 
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  117  PVMLEQGAGsiv--sissivGTDGNIGQSNYGASKGGVIAMSKGWAKELSRKGAQIRVNC  174
            P M  QG+GSIV  S  S    +G +G ++Y+A+K+GV++++K+ A+E++    QIR+N 
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP--DQIRINS  225

Query  175  IAPGFITTDMTKNL-PEKVIQMMESKTPLGRMGSVQDIANGVAFLVSDKSAFITGQVLKI  233
            IAPG+I TD+T  L  +   + +    PLGR+G+ QD+AN+  FL SD S+++TG  L +
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  234  DGGLVL  239
            +GG+++
Sbjct  286  NGGMLI  291

908) PCC21_026120 in NC_018525


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (455),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSEKGAEAISGWLGENGKGYML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E +A   ++ LGE   G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVADAASVESVLAEIRAEFGEIDILINNAGITRDNLLMRMKDDEWHDILDTNLTSVFRMS  118
            NVAD + V   +A I  +FG ID+L+NNAGIT+    + ++ ++ + +LD +L + + MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTQAL-TEEQRAGILTSVPANRLGDAKEIASAVVFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+ ++P  RLG A+++A+A +FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

909) W5S_2788 in NC_017845


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (455),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSEKGAEAISGWLGENGKGYML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E +A   ++ LGE   G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVADAASVESVLAEIRAEFGEIDILINNAGITRDNLLMRMKDDEWHDILDTNLTSVFRMS  118
            NVAD + V   +A I  +FG ID+L+NNAGIT+    + ++ ++ + +LD +L + + MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTQAL-TEEQRAGILTSVPANRLGDAKEIASAVVFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+ ++P  RLG A+++A+A +FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

910) fabG in NC_013421


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (455),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSEKGAEAISGWLGENGKGYML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E +A   ++ LGE   G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVADAASVESVLAEIRAEFGEIDILINNAGITRDNLLMRMKDDEWHDILDTNLTSVFRMS  118
            NVAD + V   +A I  +FG ID+L+NNAGIT+    + ++ ++ + +LD +L + + MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTQAL-TEEQRAGILTSVPANRLGDAKEIASAVVFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+ ++P  RLG A+++A+A +FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

911) Fjoh_2889 in NC_009441


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 106/255 (42%), Positives = 169/255 (67%), Gaps = 15/255 (5%)

Query  1    MKLLEGKVAIITGAS--RGIGKGIAEVFAKHGANVAFTYsssaasaealekelnalGVKA  58
            + LL+GK+AIITGA+  RGIG++ A  FA+HGA V +          A      +LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGH  98

Query  59   KGYQSNAADFNEAQTFVDAVLADFGTVDILINNAGITKDNLLMRMSEADFDQVIDVNLKS  118
             G  +N AD ++ +  V +++ +FG +D+L+NNAGIT+    + +  +D+D+V+DV+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  VFNMTKAIQKTFLKQRagsii--nissvvgvsgnagQTNYAASKAGAIGFTKSVALELGS  176
             + M++A+  T   Q +GSI+  +  S    +G  G  +Y+A+KAG +G+ K++A E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RNIRCNAIAPGFIETEMTAKLSEDVVKGWR----EGIPLKRGGTTEDVANACLFLASDMS  232
             +IR N+IAPG+I+T++T+ L +D    +R    EGIPL R G+++DVANA LFLASD+S
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQD---ERRHAIIEGIPLGRLGAAQDVANAALFLASDLS  275

Query  233  AYITGQVLNVCGGML  247
            +Y+TG  L+V GGML
Sbjct  276  SYLTGITLDVNGGML  290

912) Ilyop_0274 in NC_014632


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 104/252 (42%), Positives = 160/252 (64%), Gaps = 21/252 (8%)

Query  1    MRLEEKVCIVTGGA--KGIGAEMAQLFAKEGAKVIAADMSDLDYSVENIE------GYKL  52
            M L+ K+ I+TG+A  +GIG   A  FA++GA+V+  D+ +               G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  53   NVADTNQCEELFKYASEKYGRIDVLVNNAGITRDGLTHKITDDMWNMVIDVNLKGVFNLT  112
            NVAD +Q  +      E +GRIDVLVNNAGIT+   T  I  +  + V+DV+L+G + ++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  113  KHVGPYMMKQGNGSIINISSVVGEYGN--IGQANYAATKAGVIGLAKTWAKEFARKGAAV  170
            + V P M  QG+GSI+ +SSV ++ G   +G ++Y+A+KAGV+GL+K+ A+EF+     +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD--QI  221

Query  171  RANAIAPGYIMTDILKTV-----PQPLLDDFAKLTMLGRLGQPEEIAKAALFLASDDSSY  225
            R N+IAPG I TDI   +      ++++++++    LGRLG ++++A+AALFLASD SSY
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIP----LGRLGAAQDVANAALFLASDLSSY  277

Query  226  VTGHVLSVNGGM  237
            +TG  L VNGGM
Sbjct  278  LTGITLDVNGGM  289

913) Mic7113_5404 in NC_019738


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 172/251 (69%), Gaps = 13/251 (5%)

Query  11   LHDRVAIITGAS--RGIGRatalalaaegaKvvvnyassssaaeevvaaITDMGGNAIAL  68
            L++++AIITGA+  RGIGRATA+++A +GA+VV+     S+A +      + +G   ++L
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA----ATLGEGHLGL  101

Query  69   QADVSKADQVDALVNQTLEKLSRVDILVNNAGITRDTLLLRMKPEDWQAVIDLNLTGVFL  128
             A+V+   QV   V   +E ++R+D+LVNNAGIT+    L ++P D + V+D++L G +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  129  CTRAVSKIMLKQKSGRIINITSVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELATRGI  186
             ++AV   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E++   I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  187  TVNAVAPGFIATDMTSGLKSDE----ILKYIPLGRYGEPEEVAGMIRFLAADAAAAYITG  242
             +N++APG+I TD+T+GL  DE    I+  IPLGR G +++VA    FLA+D  ++Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSYLTG  280

Query  243  QVFNVDGGMVM  253
              ++V+GGM++
Sbjct  281  ITLDVNGGMLI  291

914) PC1_2503 in NC_012917


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAETLVARGAKVIGTATSEKGAEAISGWLGENGKGYML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA+V+     E +A   ++ LGE   G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVADAASVESVLAEIRAEFGEVDILINNAGITRDNLLMRMKDDEWHDILDTNLTSVFRMS  118
            NVAD + V   +A I  +FG +D+L+NNAGIT+    + ++ ++ + +LD +L + + MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTQAL-TEEQRAGILTSVPANRLGDAKEIASAVVFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+ ++P  RLG A+++A+A +FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

915) Theos_1082 in NC_019386


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 103/246 (42%), Positives = 167/246 (68%), Gaps = 10/246 (4%)

Query  1    MRLAGKRVLITGAA--HGIGRATLELFAKEGARLVACDLEEGPLREAAE--GVGALAIPM  56
            M L GK  +ITGAA  +GIGRAT   FA++GAR+V  DL+E++ R+AA   G G L+++ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  57   DVADPRSVEEGFGKALEALGGLDGVVHYAGITRDNFHWKMPLEDWEAVLRVNLTGSFLVA  116
            +VAD   V ++ +  +E +G +D +V+ AGIT+      +   D + VL V+L G++L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  117  RAASAAMRERNPGSIV----LTASRVYLGNLGQANYAASKAGVVGLTRTLALELGRYGIR  172
            +A  ++MR + +GSIV    ++A R   G +G ++Y+A+KAGV+GL +++A E+G   IR
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGG-GIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  173  VNALAPGFIETRMTAK-VPEKVREKAIQATPLGRVGEPIEVAYAALFLVSDESRFITGQV  231
            +N++APG+I+T +T+  + +  R+  I++ PLGR+G + +VA AALFL SD S ++TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  232  LFVDGG  237
            L V+GG
Sbjct  283  LDVNGG  288

916) Acid_4546 in NC_008536


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 105/261 (41%), Positives = 170/261 (66%), Gaps = 18/261 (6%)

Query  2    KTHKRFER--------QVVVVTGAG--HGIGRAVALRFADEGALVVLNDLDASRAEDAAS  51
            +THK  +R        ++ ++TGA+  +GIGRA A+ FA++GA VV+ DLD S A DAA+
Sbjct  33   RTHKNNQRTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA  92

Query  52   EV-KADLWVAADVSDKEQVDAMFDRVEEEYGRIDVLVNNAGNIYAARHFLEGDEQWWDQV  110
             +  ++L +AA+V+D  QV      + E++GRIDVLVNNAG I  +   L+      D+V
Sbjct  93   TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAG-ITQPIKTLDIRPGDYDKV  151

Query  111  LGVNLKGAFLCSHRAAQKMVRQRSGVILNMSSGGATRAHR--GNVAYDASKGGIEAMTRA  168
            L+V+L+G++L S+     M  Q SG I+ MSS +A R+    G   Y A+K+G+ ++ +A
Sbjct  152  LDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKA  211

Query  169  MALDLAPYGVRVNAIVPGLIRTYDISDETAAER----GEVVPMGRLGTPEDLAGPTVFLA  224
            MA +++P  +R+N+I PGLI+T   ++    ER     E +P+GRLG+++D+A +++FLA
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLA  271

Query  225  TDDARYITGACLVVDGGVLVQ  245
            +D + Y+TG  L V+GG+L++
Sbjct  272  SDLSSYLTGITLDVNGGMLIH  292

917) UWK_02569 in NC_020304


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 102/253 (41%), Positives = 169/253 (67%), Gaps = 11/253 (4%)

Query  1    MSLKGKNALVTGGS--RGIGRAICIRLAAMGAHVYINYVSNPDAASETRKIIIDAGGSAD  58
            M L+GK A++TG++  RGIGRA  + +A  GA+V I  + ++ A   +  +     G ++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-----GEGH  98

Query  59   I-LAFNVGESTQAQDAIQSLIKEAGSLDILVNNAGITRDGLMARMKEEDWDAVLDINLKG  117
            + LA NV++ +Q ++A+ ++I + G +D+LVNNAGIT+      ++  D D VLD++L+G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  118  SFICSKAAARSMMKKRWGRIVNISSVIGFAGNA--GQVNYAAAKAGMQGLTKSMAREFAG  175
            +++ S+A   +M  +  G IV +SSV +  G +  G  +Y+AAKAG+ GL K+MAREF+ 
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  RNITVNAVAPGYISTDMTRDL-PEAIQEKIKNQIPLASLGSPQDVAGAVAYLVSDDGAYV  234
             +I +N++APG I TD+T +L  +  ++ I + IPL+ LG++QDVA A  +L SD ++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  235  TGNTIHVNGGMYM  247
            TG T++VNGGM +
Sbjct  279  TGITLDVNGGMLI  291

918) LBF_2509 in NC_010842


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 168/249 (68%), Gaps = 7/249 (2%)

Query  1    MISLTGKTAIVTGGA--RGIGKATCLKLASLGANIVVADMNPEATNATAEELKSKGYKAI  58
            ++ L GK AI+TG+A  RGIG+AT + +A  GA +V+ D++  A+  +A  L + G   +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGH--L  99

Query  59   AVVANVSVEEDAQKLIDTAKKEFGSVDILVNNAGITRDTLLMRMKKEQWDAVIAVNLTGT  118
            ++ ANV+ E + ++ + T   +FG +D+LVNNAGIT+    + ++  + D V+ V+L GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  YLCTQAAIKVMMKQenggsi-inlssisgengnigQTNYSASKAGVIGFTKAVALEMASR  177
             L +QA I  M  Q +G+ + ++  S     G +G  +YSA+KAGV+G+ KA+A E ++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  KVRCNAIAPGFIATEMTEAI-PENIRHGMVQAIPLKRAGLPEDIANGIAFLASDASSFIT  236
            ++R N+IAPG+I T++T ++  ++ RH+++++IPL R G ++D+AN+  FLASD SS++T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GHILDINGG  245
            G  LD+NGG
Sbjct  280  GITLDVNGG  288

919) fabG in NC_010602


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 168/249 (68%), Gaps = 7/249 (2%)

Query  1    MISLTGKTAIVTGGA--RGIGKATCLKLASLGANIVVADMNPEATNATAEELKSKGYKAI  58
            ++ L GK AI+TG+A  RGIG+AT + +A  GA +V+ D++  A+  +A  L + G   +
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGH--L  99

Query  59   AVVANVSVEEDAQKLIDTAKKEFGSVDILVNNAGITRDTLLMRMKKEQWDAVIAVNLTGT  118
            ++ ANV+ E + ++ + T   +FG +D+LVNNAGIT+    + ++  + D V+ V+L GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  YLCTQAAIKVMMKQenggsi-inlssisgengnigQTNYSASKAGVIGFTKAVALEMASR  177
             L +QA I  M  Q +G+ + ++  S     G +G  +YSA+KAGV+G+ KA+A E ++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  178  KVRCNAIAPGFIATEMTEAI-PENIRHGMVQAIPLKRAGLPEDIANGIAFLASDASSFIT  236
            ++R N+IAPG+I T++T ++  ++ RH+++++IPL R G ++D+AN+  FLASD SS++T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GHILDINGG  245
            G  LD+NGG
Sbjct  280  GITLDVNGG  288

920) fabG in NC_007481


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 169/249 (68%), Gaps = 5/249 (2%)

Query  2    TNLFSLAGKVVLITGAS--RGIGKAIATTLVAQGAKVAGTATSESGAAKISEYLGESGKG  59
            T L  L GK+ +ITGA+  RGIG+A A T+  +GA+V      ES+A   +  LGE+  G
Sbjct  41   TPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLG  100

Query  60   YALNVTDPASIEATLAAIKADFGDVDVLVNNAGITRDNLLMRMKESEWDDIIDTNLSSIF  119
             A NV+D + +  ++A+I  +FG +DVLVNNAGIT+    + ++ ++ D ++D +L + +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  120  RLSKAVLRPMMKKKNGRIINIGSVVGTMgnagqany--aaakagVIGFSKSLAREVASRG  177
             +S+AV+  M  + +G I+ ++SV +  G +  +    +AAKAGV+G++K++ARE ++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  178  ITVNVVAPGFIQTDMTDGL-TDEQKAATLANVPAGRLGQPDEIAAAVCYLASDAAAYVSG  236
            I +N +APG+I+TD+T+GL  DE++ A +  +P GRLG ++++A A  +LASD ++Y++G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  237  ETLHVNGAM  245
             TL+VNG+M
Sbjct  281  ITLDVNGGM  289

921) RHOM_14070 in NC_015977


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 168/247 (69%), Gaps = 10/247 (4%)

Query  1    MLEGKVALVTGAG--RGIGSTIAETLAREGAFVVV---NYRGSGQAAQELAEKIGGVAMQ  55
            +L+GK+A++TGA+  RGIG + A T+A++GA VV+   +  ++ +AA  L+E  G +++ 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLA  102

Query  56   CDVADFEACENMIKTMIETYGHLDILVNNAGITRDGLLMKMSEADFEAVLSTNLKGTFHT  115
             +VAD     + + T+IE +G++D+LVNNAGIT+    + +  +D++ VL  +L+GT+  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  116  IRHASRYFLKQRYGRIVNISSVSGVMGNA--GQANYSASKAGVIGLTKSVARELASRGIT  173
             +        Q  G IV +SSVS+  G +  G ++YSA+KAGV+GL K++ARE+++  I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  174  CNAVAPGFIETDMTDA-MTESAKEAVQKQIPLGRCGNTKDVAELVTFLASDKAAYITGQV  232
             N++APG+I+TD+T++ M +  ++A+   IPLGR G ++DVA+   FLASD ++Y+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  233  ISVDGGM  239
            + V+GGM
Sbjct  283  LDVNGGM  289

922) fabG in NC_021741


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 170/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFEGKVVLVTGAS--RGIGRAIAETFVARGAKVIGTATSESGAEAISSYLGANGKGFAL  58
            M ++GK+ ++TGA+  RGIGRA A TF  +GA+V+     ES+A   ++ LG    G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDAQSIDSVLASIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILNTNLTSVFRLS  118
            NV D   +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + +L+ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

923) fabG in NC_020211


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIVLVTGAS--RGIGRAIAETFVARGAKVIGTATSESGAEAISGYLGANGKGFML  58
            M ++GKI ++TGA+  RGIGRA A TF  +GA+V+     ES+A   ++ LG    G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDAQSIDSVLASIRAEFGEIDILVNNAGITRDNLLMRMKDDEWEDILDTNLTSVFRLS  118
            NV D   +   +A+I  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRFGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

924) FraEuI1c_6666 in NC_014666


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (453),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 109/252 (44%), Positives = 167/252 (67%), Gaps = 18/252 (7%)

Query  7    GKVAIVTGAAS--GIGRACATRLAQDGAAVAVLDLNEGDAKTVADEIQaaggaalavaad  64
            GK+AI+TGAAS  GIGRA A  +AQ+GA V +LDL+E+ A+  A  +   G + L++AA+
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLGLAAN  104

Query  65   vadPESVARALAATRDRFGPVTILVNSAGKTGTKRFLDITLEQWTSVLTVNLTGTFLCCQ  124
            VAD   V +A+A+  ++FG + +LVN+AG T   + LDI   +   VL V+L GT+L  Q
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  125  AVVPDMVEAGWGRIVNISSSSAQGGQALM--SHYVASKGGVIAFTKALALELGPAGITVN  182
            AV+P M   G G IV +SS SAQ G ++   +HY A+K+GV+++ KA+A E+GP  I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  183  TIPPGFVDTPM---LRRDEARGRWGPNTADDLIARTPVRRMGLPEDIAAACSFLTSEEAS  239
            +I+PG+++T +   L +DE R        + +I   P+ R+G ++D+A A  FL+S+ +S
Sbjct  225  SIAPGLIHTDITGGLMQDERR--------HAIIEGIPLGRLGAAQDVANAALFLASDLSS  276

Query  240  YITGQVFGVNGG  251
            Y+TG  ++VNGG
Sbjct  277  YLTGITLDVNGG  288

925) Cagg_0281 in NC_011831


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (452),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 176/253 (70%), Gaps = 9/253 (3%)

Query  2    LLDLNGRVAIVTGGS--RGIGRAIAERLAASGAAVVVNYRGNAAAAEETVTAIHAAGGKA  59
            L+ L+G++AI+TG++  RGIGRA A  +A  GA VV+   +++AA + + T     G   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGH  98

Query  60   VAVQGDVSQPADVEQMVKTTIEQFGRIDILVNNAGITRDTLLLRMKESDFDEVIATNLRG  119
            +++ ++V++ ++V Q V T IE+FGRID+LVNNAGIT+    L ++ +D+D V+  +LRG
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  120  VFLCTRAVLRPMTKQRFGRIINITSVIGLignag--qanyaaakagiigFTKSTAREMAS  177
             +L ++AV+  M  Q  G I+ ++SV +  G +    ++Y+AAKAG++G+ K+ ARE ++
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  178  RGITVNAIAPGFIETEMTATLSEETRK-AILATIPLGRFGQPAEVAGLVCFLASDAGAYI  236
              I +N+IAPG+I+T++T+ L ++ R+ AI+  IPLGR+G + +VA    FLASD ++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  237  SGQTLTIDGGMVM  249
            +G TL ++GGM++
Sbjct  279  TGITLDVNGGMLI  291

926) fabG in NC_011852


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (452),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 164/247 (67%), Gaps = 6/247 (2%)

Query  1    MQNKIALVTGAT--RGIGRAIAEELVSKGAFVIGTATSEKGAEAISASLGDKGKGLVLNV  58
            +Q KIA++TGA+  RGIGRA A  +   GA V+     E +A   +A+LG+   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   ADLTSIEQVLAQIKEQFGDIDILVNNAGITRDGLLMRMKEDDWFDIIQTNLTSIYRLSKA  118
            AD + + Q +A I E+FG ID+LVNNAGIT+    + ++ +D   +++ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VLRPMMKKGGRiisigsvvgsvgNP---GQTNYCAAKAGLVGFSKSLAKEVASRGVTVNV  175
            V+  M  +G+  I   S V++       G  +Y AAKAG++G++K++A+E ++  + +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  176  VAPGFIATDMTDELTEDQ-KNAILSQIPAGKLGSAQDIAKAVAFLASDDAAYINGETIHV  234
            +APG+I TD+T+ L +D+ ++AI+  IP G+LG+AQD+A+A  FLASD ++Y+ G T++V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  235  NGGLYMN  241
            NGG+ ++
Sbjct  286  NGGMLIH  292

927) fabG in NC_021521


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (452),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 164/247 (67%), Gaps = 6/247 (2%)

Query  1    MQNKIALVTGAT--RGIGRAIAEELVSKGAFVIGTATSEKGAEAISASLGDKGKGLVLNV  58
            +Q KIA++TGA+  RGIGRA A  +   GA V+     E +A   +A+LG+   GL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  59   ADLTSIEQVLAQIKEQFGDIDILVNNAGITRDGLLMRMKEDDWFDIIQTNLTSIYRLSKA  118
            AD + + Q +A I E+FG ID+LVNNAGIT+    + ++ +D   +++ +L +   +S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  119  VLRPMMKKGGRiisigsvvgsvgNP---GQTNYCAAKAGLVGFSKSLAKEVASRGVTVNV  175
            V+  M  +G+  I   S V++       G  +Y AAKAG++G++K++A+E ++  + +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  176  VAPGFIATDMTDELTEDQ-KNAILSQIPAGKLGSAQDIAKAVAFLASDDAAYINGETIHV  234
            +APG+I TD+T+ L +D+ ++AI+  IP G+LG+AQD+A+A  FLASD ++Y+ G T++V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  235  NGGLYMN  241
            NGG+ ++
Sbjct  286  NGGMLIH  292

928) Bphyt_0979 in NC_010681


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (452),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 94/227 (42%), Positives = 153/227 (68%), Gaps = 10/227 (4%)

Query  23   LKFAKEGARVAVCDVNHDAVSRVVaachaagaqaLGFTLDVTNRAAVDGMVADVRERFRQ  82
            + FA++GARV + D++ ++ +R   A  + G   LG++ +V++ + V   VA + E+F +
Sbjct  68   VTFAQHGARVVILDLD-ESAAR--DAAATLGEGHLGLAANVADESQVKQAVATIIEHFGR  124

Query  83   IDVLVNNAGITRDARLQKMTLQQFDDVIDVNLRGVFHAAQAVVDTMIAQGSGVILNASSV  142
            IDVLVNNAGIT+  +   +   ++D V+DV+LRG +  +QAV+ TM AQGSG I+  SSV
Sbjct  125  IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSV  184

Query  143  VGLYGN--YGQTNYAAAKFGVIGFTKTWSRELGPKGIRVNAIAPGFIDTPILSTVPQEVL  200
             +  G   +G  +Y+AAK GV+G+ K+ +RE+GP  IR+N+IAPG+I+T I + + Q+  
Sbjct  185  SAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQD--  242

Query  201  AKMR---EQVPLRRLGTPEEIANIYAFLASDEASYINGAVIEASGGM  244
             + +   E +PL RLG+++++AN   FLASD +SY+ G  ++ +GGM
Sbjct  243  ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGM  289

929) Bxe_B1031 in NC_007952


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (452),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 109/262 (42%), Positives = 166/262 (64%), Gaps = 17/262 (6%)

Query  1    MLLKDKVVIVTGAS--RGIGRAIAVACATEGADVAINYWGDNDASYGRRSAVAEVVGEIE  58
            MLL++K+ I+TGA+  RGIGRA AV+ A +GA V I   +++ A    R A A       
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAA----RDAAA-------  92

Query  59   ALGRRVIAIEGNVAARETGQQLVRHTVEAFGKVDVLASNAGICPFHAFLDMPPEVLESTV  118
            +LG   +++ +NVA     +Q V   +E FG++DVL +NAGI      LD+ P   +  +
Sbjct  93   TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVL  152

Query  119  AVNLNGAFYVTQAAAQQMKAQGTGGAIVATSSISALVGGGM--QTHYTPTKAGVHSLMQS  176
             V+L G++ ++QA    M+AQG+ G+IV  SS+SA  GGG+    HY+++KAGV +L ++
Sbjct  153  DVSLRGTLLMSQAVIPTMRAQGS-GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKA  211

Query  177  CAVALGPYGIRCNSVMPGTIATDLNAQDLADEAKKAYFEKRIPLGRLGRPEDVADCVTFL  236
             A  +GP  IR NS+ PG I TD+ +  + DE + A +E  IPLGRLG ++DVA+   FL
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFL  270

Query  237  ASDRARYVTGAALLVDGGLFVN  258
            ASD + Y+TG +L V+GG++++
Sbjct  271  ASDLSSYLTGITLDVNGGMLIH  292

930) Mpe_A2921 in NC_008825


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  124 bits (452),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 167/252 (67%), Gaps = 13/252 (5%)

Query  8    LSGRVTVVTGAA--QGIGAACAERFAREGAPVALWDVDDERGQTMAARLAAA--GVQAIY  63
            L G+++++TGAA  +GIG A A  FA++GA V + D+D+  ++  AA L+ +  G+ A  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA--  103

Query  64   RHCDVSRadqvqaahaatlaaFGRIDVLVNNAGIFRAADFLDVTEADWDAVIGVNLKGAF  123
               +V+   QV+ A A+ +  FGRIDVLVNNAGI ++   LD+  +D D V++V+L+G++
Sbjct  104  ---NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  124  LVGQACARTMASQGRGVIVNMSSVNGLMAIPTIAS--YNASKGGINQLTRAMALALADHG  181
            L++QA   TM +QG G IV MSSV++  +   +++  Y+A+K+G+  L +AMA  ++ + 
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  182  VRVNAVAPGTIATELATQAVLTSDEARQRILGRTPLKRLGEPAEIADVVAFLASDAASYL  241
            +R+N++APG I T+++  + L  DE R+ I+   PL RLG + ++A+   FLASD +SYL
Sbjct  221  IRINSIAPGLIHTDIT--GGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  242  TGQIVYADGGRL  253
            TG  +  +GG L
Sbjct  279  TGITLDVNGGML  290

931) Oant_1182 in NC_009667


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 108/258 (42%), Positives = 173/258 (68%), Gaps = 18/258 (6%)

Query  1    MQLEGKVAIVTGAA--RGIGYAIAKRFLMDGASVVLSDIDNAAAMRAAKDLEQFGPVRHM  58
            M L+GK+AI+TGAA  RGIG A A  F  +GA VV+ D+D++AA  AA  L + G +  +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHL-GL  101

Query  59   AADVGDKLDVHNLLTFTITNLGEVDILVNNAGIVHQADFLDLKEEDFDRVMRVNLKGAFL  118
            AA+V+D  +V + ++  I ++G +D+LVNNAGI +    LD++  D+D+V+ V+L+G++L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CGQAVAKRMVERVESGGDPGTIINMSSVNA-----IFGLPEQLAYSVSKGGLNQLTRTMA  173
             +QAV   M  R ++   +G+I+ MSSV+A     IFG P+   YS +K+G+  L ++MA
Sbjct  162  MSQAVIPTM--RAQG---SGSIVCMSSVSAQRGGGIFGGPH---YSAAKAGVLGLGKAMA  213

Query  174  VALARWGIRVNAIGPGSIETDMLSAVNTDADARNRILSRTPLGRIGQASEIASIASFLAS  233
              ++   IR+N+I+PG I+TD+ +++  D + R+ I+   PLGR+G A ++A+ A FLAS
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLMQD-ERRHAIIEGIPLGRLGAAQDVANAALFLAS  272

Query  234  RDASYVTGQTIYADGGRL  251
              +SY+TG T+  +GG L
Sbjct  273  DLSSYLTGITLDVNGGML  290

932) PGN_1375 in NC_010729


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 167/251 (67%), Gaps = 9/251 (3%)

Query  1    MKLLENKVALITgagrgigr--aiaYKYATEGADVAITDLNIDEGVQAFVEELKGLGVRa  58
            + LL+ K+A+ITGA+   G   A A  +A +GA V I  L++DE+     +    LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI--LDLDESAAR--DAAATLGEGH  98

Query  59   aayasnaadfdaaHTVVEQIKADFGRIDILVNNAGITRDGLMMRMTEQQWDAVINVNLKS  118
             + A+N AD       V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNMIHAVTPIMMGQRTGSIINMASVVGVSGNA--GQSNYSASKAGMIGLAKSVAKELGS  176
            ++ M +AV P M +Q +GSI+ M+SV +  G +  G ++YSA+KAG++GL+K++A+E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGVRANAIAPGFIITDMTAVLSEEVKKQWAAQ-IPLRRGGTPEDVANVATFLGSDLSSYV  235
              +R N+IAPG+I TD+T+ L ++ +++   + IPL R G+++DVAN A FL+SDLSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVVHVCGGM  246
            TG  ++V GGM
Sbjct  279  TGITLDVNGGM  289

933) fabG in NC_015571


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 167/251 (67%), Gaps = 9/251 (3%)

Query  1    MKLLENKVALITgagrgigr--aiaYKYATEGADVAITDLNIDEGVQAFVEELKGLGVRa  58
            + LL+ K+A+ITGA+   G   A A  +A +GA V I  L++DE+     +    LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI--LDLDESAAR--DAAATLGEGH  98

Query  59   aayasnaadfdaaHTVVEQIKADFGRIDILVNNAGITRDGLMMRMTEQQWDAVINVNLKS  118
             + A+N AD       V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNMIHAVTPIMMGQRTGSIINMASVVGVSGNA--GQSNYSASKAGMIGLAKSVAKELGS  176
            ++ M +AV P M +Q +GSI+ M+SV +  G +  G ++YSA+KAG++GL+K++A+E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGVRANAIAPGFIITDMTAVLSEEVKKQWAAQ-IPLRRGGTPEDVANVATFLGSDLSSYV  235
              +R N+IAPG+I TD+T+ L ++ +++   + IPL R G+++DVAN A FL+SDLSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVVHVCGGM  246
            TG  ++V GGM
Sbjct  279  TGITLDVNGGM  289

934) fabG in NC_002950


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 105/251 (42%), Positives = 167/251 (67%), Gaps = 9/251 (3%)

Query  1    MKLLENKVALITgagrgigr--aiaYKYATEGADVAITDLNIDEGVQAFVEELKGLGVRa  58
            + LL+ K+A+ITGA+   G   A A  +A +GA V I  L++DE+     +    LG   
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI--LDLDESAAR--DAAATLGEGH  98

Query  59   aayasnaadfdaaHTVVEQIKADFGRIDILVNNAGITRDGLMMRMTEQQWDAVINVNLKS  118
             + A+N AD       V  I  +FGRID+LVNNAGIT+    + +   + D V++V+L++
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  119  AFNMIHAVTPIMMGQRTGSIINMASVVGVSGNA--GQSNYSASKAGMIGLAKSVAKELGS  176
            ++ M +AV P M +Q +GSI+ M+SV +  G +  G ++YSA+KAG++GL+K++A+E+G+
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGVRANAIAPGFIITDMTAVLSEEVKKQWAAQ-IPLRRGGTPEDVANVATFLGSDLSSYV  235
              +R N+IAPG+I TD+T+ L ++ +++   + IPL R G+++DVAN A FL+SDLSSY+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGQVVHVCGGM  246
            TG  ++V GGM
Sbjct  279  TGITLDVNGGM  289

935) Rahaq2_2977 in NC_016818


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAEKLVAGGAKVIGTATSEKGAEAIGEYLGENGKGIML  58
            M ++GKIA++TGA+  RGIGRA A  +   GA+V+     E +A   +  LGE   G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDSASIEQVLATIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV D + + Q +ATI  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

936) fabG in NC_017047


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAEKLVAGGAKVIGTATSEKGAEAIGEYLGENGKGIML  58
            M ++GKIA++TGA+  RGIGRA A  +   GA+V+     E +A   +  LGE   G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDSASIEQVLATIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV D + + Q +ATI  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

937) Rahaq_2955 in NC_015061


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAEKLVAGGAKVIGTATSEKGAEAIGEYLGENGKGIML  58
            M ++GKIA++TGA+  RGIGRA A  +   GA+V+     E +A   +  LGE   G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVVDSASIEQVLATIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV D + + Q +ATI  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSSVPANRLGDAKEIASAVAFLASDEASYITGETL  235
            N +APG+I+TD+T +L  D++R +I+ ++P  RLG A+++A+A  FLASD +SY+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

938) Fraau_1396 in NC_017033


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (451),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 163/247 (66%), Gaps = 8/247 (3%)

Query  4    VLKGEIALVTGAS--RGIGAAIADELARQGATVIGTATSESGAKAIGERLAPLGGH-GRA  60
            +L+G IA++TGA+  RGIG A A  +A++GA V+     ES+A+  +  L+   GH G A
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG--EGHLGLA  102

Query  61   LDVTDKEGLEALLAGIEKEFGAVSLLVNNAGITRDQLLMRMKDEDWQAIIDTNLSSVFRT  120
             +V+D   +   +A I  +FG + +LVNNAGIT+    + ++  D + ++D +L + +  
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  121  SKAVLRGMMKARKGRIISIASVIGLTGNP--GQANYAAAKAGIIGFSKSLAREVGSRGIT  178
            S+AV+  M     G I+ ++SV +  G    G ++Y+AAKAG++G++K++ARE G+  I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  VNVVAPGFIDTDMTRSL-PDDAKTALLGQIALGRLGEASDIAQAVSFLASPAAAYITGET  237
            +N +APG+I+TD+T +L  D+ + A++  I+LGRLG A D+A+A  FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  238  LHVNGGM  244
            L+VNGGM
Sbjct  283  LDVNGGM  289

939) Acfer_1392 in NC_013740


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 174/252 (70%), Gaps = 9/252 (3%)

Query  1    MTLVGKVALVTGGS--RGIGRAIALKLAKNGADVAINYAGNTAAAEEVKAAIEQMGRKAL  58
            M L GK+A++TG++  RGIGRA A+ +A++GA V I   +++AA    + A   +G   L
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAA----RDAAATLGEGHL  99

Query  59   LIQCSVADTDGVQAMVNQVVKDLGRLDILVNNAGITRDGLLMRMKEADWDDVMNTNLKGV  118
             +  +VAD   V+  V  ++ ++GR+D+LVNNAGIT+    + ++ +D D V++ +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  YNCSKAVMRTMMKQKSGRIVNMASVVGEMgnag--qanyaaakagVIGFTKSLAKEVASR  176
               S+AV+ TM  Q SG IV M+SV ++ G +    ++Y+AAKAGV+G+ K++A+E ++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GITVNAIAPGFIATDMT-SVLSDDQKAEMARTIPLGRAGQPEDVANAVLFLASEGAAYIT  235
             I +N+IAPG+I TD+T +++ D+++  +   IPLGR G ++DVANA LFLAS+ ++Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQVLNVDGGMVM  247
            G  L+V+GGM++
Sbjct  280  GITLDVNGGMLI  291

940) CAP2UW1_1538 in NC_013194


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (450),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 174/251 (70%), Gaps = 8/251 (3%)

Query  1    MLNGEVALVTGAS--RGIGQAIALEMGRLGATVIGTATSSAGAARISAFLADAGSKGEGA  58
            +L+G +A++TGA+  RGIG+A A+  ++ GA V+      ++A   +A L++ G  G +A
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAA  103

Query  59   VLEVRDAPQVEELIRRIEKTYGAVSVLVNNAGITRDNLSLRLKDDDWDLVLDTNLKAVFR  118
              +V D +QV + +  I   +G + VLVNNAGIT+   +L ++ +D D VLD +L++ + 
Sbjct  104  --NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  LSRGVMRGMMKARRGRIINVTSVVGHAGNA--GQANYCAAKAGVAGMSRALARELASRNI  176
            +S++V+  M     G I+ ++SV ++ G +  G ++Y AAKAGV G+++A+ARE+++ +I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  177  TVNCVAPGLIDTDMTRAL-DERQRDSLAAGIPLGRLGLPQDVaaavaflasaaaGYVTGT  235
             +N +APGLI+TD+T +L ++ +R+++  GIPLGRLG +QDVA A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  236  TIHVNGGMFMD  246
            T++VNGGM+++
Sbjct  282  TLDVNGGMLIH  292

941) M636_05805 in NC_021822


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (450),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 164/246 (67%), Gaps = 14/246 (5%)

Query  5    KVAVVTGAA--RGIGQAICEQLLEDGFHVVGLDIS-PLEWSQSAQLSSYQVNLC----DA  57
            K+A++TGAA  RGIG+A    + ++G +VV LD+  +  +  +A L+  ++ L     D 
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  58   AAVSEVVDSIVEQHGRIDALVNNAGITRDALLPDMLEQDWDSVIDVNLKAVFLLTQRVAP  117
            + V + V +I+E+ GRID LVNNAGIT+     D+   D D V+DV+L++ +L++Q V P
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  118  VMLEQGAGsiv--sissivGTDGNIGQSNYGASKGGVISMSKGWAKELSRKGAQIRVNCV  175
             M  QG+GSIV  S  S    +G +G ++Y+A+K+GV++++K+ A+E++    QIR+N +
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP--DQIRINSI  226

Query  176  APGFITTDMTKNL--PEKVIQMMESKTPLGRMGSVQDIANGVAFLVSDKSAFITGQVLKI  233
            APG+I TD+T  L   E+   ++E+  PLGR+G+ QD+AN+  FL SD S+++TG  L +
Sbjct  227  APGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  234  DGGLVL  239
            +GG+++
Sbjct  286  NGGMLI  291

942) Ilyop_2112 in NC_014633


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (450),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 105/252 (42%), Positives = 164/252 (66%), Gaps = 21/252 (8%)

Query  1    MRLEDKVCIVTGGA--KGIGFEMAKLFASEGAKVIAADMS-----DLDYSLENVE-GYKL  52
            M L++K+ I+TG+A  +GIG   A  FA +GA+V+  D+      D   +L + + G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  53   NVANPTQCEELFKYASEKYGKIDVLVNNAGITRDALTHKITDDMWDIVIDVNLKGVFNLT  112
            NVA+ +Q  +      E +G+IDVLVNNAGIT+   T  I  +  D V+DV+L+G + ++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  113  KHVGPYMMKQGNGSIINISSVVGEYGN--IGQANYSATKAGVIGLAKTWAKEFARKGAAV  170
            + V P M  QG+GSI+ +SSV ++ G   +G ++YSA+KAGV+GL+K+ A+EF+     +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD--QI  221

Query  171  RANAIAPGYVMTDILKTV-----PQPLLDDFAKLTMLGRLGQPEEIAKAALFLASDDSSY  225
            R N+IAPG + TDI   +      ++++++++    LGRLG ++++A+AALFLASD SSY
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIP----LGRLGAAQDVANAALFLASDLSSY  277

Query  226  VTGHVLSVNGGM  237
            +TG  L VNGGM
Sbjct  278  LTGITLDVNGGM  289

943) fabG in NC_012962


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (449),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 168/248 (68%), Gaps = 5/248 (2%)

Query  1    MKLDGKIALVTGAS--RGIGRAIAELFAERGACVIGTATSEKGAEVISAYLGEKGKGLVL  58
            M L+GKIA++TGA+  RGIGRA A  FA++GA V+     E +A   +A LGE   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDQESIEQVMSTIRTEFGEIDILVNNAGITCDNLVMRIKDDEWQNVIDTNLSSVFRMS  118
            NV+D+  + Q ++TI  +FG ID+LVNNAGIT     + I+ ++ ++V+D +L + + MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAAMRSMIKKRYgriisigsvvgaigNP--GQASYAAAKAGLIGFSKTLAREVVSRGITV  176
            +A + +M  +  G I+ ++SV +  G    G + Y+AAKAG++G++K++ARE  +  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGLIETDMLRAL-PDEQLESFSKDIPTKRLGDVKEIASAVAFLASDEAAYITGETI  235
            N +APGLI+TD+  +L  DE+ +++  +IP  RLG  +++A+A  FLASD ++Y+TG T+
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGMYM  243
            +VNGGM +
Sbjct  284  DVNGGMLI  291

944) TTC0394 in NC_005835


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 167/246 (68%), Gaps = 10/246 (4%)

Query  1    MRLKDKAVLITGAA--HGIGRATLELFAREGARLVACDIEEGPLREAAEAVGAHPVVM--  56
            M L++K  +ITGAA  +GIGRAT   FA++GAR+V  D++E++ R+AA ++G   + +  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  57   DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA  116
            +VAD + V ++ A  + H+GR+D +V+ AGIT+      +   D + VL V+L G++L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  117  KAASEAMREKNPGSIV----LTASRVYLGNLGQANYAASKAGVVGLTRTLALELGRWGIR  172
            +A   +MR + +GSIV    ++A R   G +G ++Y+A+KAGV+GL +++A E+G   IR
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRG-GGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  173  VNALAPGFIETRMTAK-VPEKVREKAIAATPLGRAGKPLEVAYAALFLVSDESSFITGQV  231
            +N++APG+I+T +T+  + +  R+  I + PLGR G + +VA AALFL SD SS++TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  232  LFVDGG  237
            L V+GG
Sbjct  283  LDVNGG  288

945) FAES_0582 in NC_020054


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (449),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 148/211 (71%), Gaps = 7/211 (3%)

Query  25   FTREGAAVVIWDMLDEGE-DTAQTLRDQGYKATFMRVSVTDVPSVEEAVRAVLEQYGQID  83
            F+++GA VVI D+ + +  D+A TL ++G  +  +  +V+D + V +AV +++E++G+ID
Sbjct  70   FAQHGARVVILDLDESAARDAAATL-GEGHLG--LAANVADESQVKQAVATIIEHFGRID  126

Query  84   ILVNNAGITRDRTLLKMSHLEWQQVIDVNLTGVFNCTKAVVPHMVEQKYGRIICTSSVVG  143
            +LVNNAGIT+    L +   + ++V+DV+L G +  ++AV+P M  Q  G I+C SSV +
Sbjct  127  VLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSA  186

Query  144  IHGN--FGQTNYAATKAGVVAMCRTWAKELGSKGITANAVAPGFIRTDMTDA-MPEEARQ  200
             +G   FG  +Y+A+KAGV+++ ++ A+E+G+  I  N++APG+I+TD+T++ M +E R+
Sbjct  187  QRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRH  246

Query  201  ATIQLIPAKRMGEPLDIAYAYLYLASDEASF  231
            A I+ IP  R+G + D+A A L+LASD +S+
Sbjct  247  AIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

946) MU9_2728 in NC_020418


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGRAIAEKLAARGATVIGTATSESGAAAISEYLGAKGKGLAL  58
            M ++GKIA++TGA+  RGIGRA A  +A +GA V+     ES+A   +  LG    GLA 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSASIDHVLENIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLSSVFRLS  118
            NV+D + + + +  I  +FG ID+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVMRAMMKKRCGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDDQRAGILSQVPANRLGDAEEIASAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L  D++R +I+  +P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

947) fabG in NC_017731


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 173/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFEGKIALVTGAS--RGIGKAIALTLAARGATVIGTATSEKGAEAISAYLDGKGKGFAL  58
            M ++GKIA++TGA+  RGIG+A A+T+A +GA V+     E +A   +A L+    G+A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDPASIDETLNNIRQQFGEIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLSSVYRLS  118
            NV+D + + +++  I ++FG ID+LVNNAGIT+    + ++ ++ + ++D +L +   +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRAMMKKRCGRIISIASVVGVMgnag--qanyaaakagLIGFSKSLAREVASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTKAL-TDEQRAGILSQVPADRLGDAQEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  DE+R +I+  +P +RLG AQ++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

948) Patl_2122 in NC_008228


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 99/244 (41%), Positives = 169/244 (70%), Gaps = 5/244 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIAEQLVNDGATVIGTATSEAGANAISEYLADNGKGMVLNV  61
            L+GKIA++TGA+  RGIG+A A  + ++GA V+     E++A   +  L++   G+  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   SEPESMTRLLADIAEQFGVIDILVNNAGITRDNLLMRMKDEEWQDIINTNLTSVFNMSKA  121
            ++   + + +A I E+FG ID+LVNNAGIT+    + ++  + + +++ +L + + MS+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  122  VLRGMMKKRCGRIINIGSVVgssgnag--qanyaaakagVIGFTKSMAREVASRGITVNV  179
            V+  M  +  G I+ ++SV +  G +    ++Y+AAKAGV+G+ K+MARE ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  180  VAPGFIDTDMTKAL-NDDQREAIFKDIPANRLGSVQEVASAVGFLASNSAAYITGETLHV  238
            +APG+I+TD+T +L +D++R+AI+ +IP  RLG+ Q+VA+A  FLAS+ ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  239  NGGM  242
            NGGM
Sbjct  286  NGGM  289

949) TTHA0750 in NC_006461


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 167/246 (68%), Gaps = 10/246 (4%)

Query  1    MRLKDKAVLITGAA--HGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVM--  56
            M L++K  +ITGAA  +GIGRAT   FA++GAR+V  D++E++ R+AA ++G   + +  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  57   DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA  116
            +VAD + V ++ A  + H+GR+D +V+ AGIT+      +   D + VL V+L G++L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  117  KAASEAMREKNPGSIV----LTASRVYLGNLGQANYAASKAGVVGLTRTLALELGRWGIR  172
            +A   +MR + +GSIV    ++A R   G +G ++Y+A+KAGV+GL +++A E+G   IR
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRG-GGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  173  VNALAPGFIETRMTAK-VPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV  231
            +N++APG+I+T +T+  + +  R+  I + PLGR G + +VA AALFL SD SS++TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  232  LFVDGG  237
            L V+GG
Sbjct  283  LDVNGG  288

950) TtJL18_1301 in NC_017587


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 166/246 (68%), Gaps = 10/246 (4%)

Query  1    MRLKDKAVLITGAA--HGIGRATLELFAKEGARLVACDVEEGPLREAAERVGAHPVVM--  56
            M L++K  +ITGAA  +GIGRAT   FA++GAR+V  D++E++ R+AA  +G   + +  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  57   DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA  116
            +VAD + V ++ A  + H+GR+D +V+ AGIT+      +   D + VL V+L G++L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  117  KAASEAMREKNPGSIV----LTASRVYLGNLGQANYAASKAGVVGLTRTLALELGRWGIR  172
            +A   +MR + +GSIV    ++A R   G +G ++Y+A+KAGV+GL +++A E+G   IR
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRG-GGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  173  VNALAPGFIETRMTAK-VPEKVREKAIAATPLGRAGKPLEVAYAALFLVSDESSFITGQV  231
            +N++APG+I+T +T+  + +  R+  I + PLGR G + +VA AALFL SD SS++TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  232  LFVDGG  237
            L V+GG
Sbjct  283  LDVNGG  288

951) Ththe16_0757 in NC_017272


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 166/246 (68%), Gaps = 10/246 (4%)

Query  1    MRLKDKAVLITGAA--HGIGRATLELFAKEGARLVACDVEEGPLREAAERVGAHPVVM--  56
            M L++K  +ITGAA  +GIGRAT   FA++GAR+V  D++E++ R+AA  +G   + +  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  57   DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA  116
            +VAD + V ++ A  + H+GR+D +V+ AGIT+      +   D + VL V+L G++L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  117  KAASEAMREKNPGSIV----LTASRVYLGNLGQANYAASKAGVVGLTRTLALELGRWGIR  172
            +A   +MR + +GSIV    ++A R   G +G ++Y+A+KAGV+GL +++A E+G   IR
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRG-GGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  173  VNALAPGFIETRMTAK-VPEKVREKAIAATPLGRAGKPLEVAYAALFLVSDESSFITGQV  231
            +N++APG+I+T +T+  + +  R+  I + PLGR G + +VA AALFL SD SS++TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  232  LFVDGG  237
            L V+GG
Sbjct  283  LDVNGG  288

952) Celgi_0772 in NC_015671


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 161/246 (66%), Gaps = 10/246 (4%)

Query  13   LEGKVAIVTGAA--RGMGEADARRLVAEGAHVVVADVLDDEGRQVADALGDAAVYVHLDV  70
            L+GK+AI+TGAA  RG+G A A  +  +GA+VV+ D+ +  +R+ A +LG++ + +  +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  71   ADETSWEHAMSVAHERFGPVDVLVNNAGILAQGPVDQTDPATFRHVLDVNLTGVFLGIRA  130
            ADE+   +A++   E+FG +DVLVNNAGI       +  P+ +  VLDV+L G +L  +A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  131  VVPDMRERG-GSIVNISSAAGLVGMQGLGA--YASSKWGVRGLTKCAALDLGRHGIRVNS  187
            V+P MR +G GSIV +SS ++  G   +G+  Y+++K GV GL K  A ++G + IR+NS
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  188  IHPGAIRTPMAAGVTDADLAHQ-----ALPRVGEPDEIAAVVAFLASDDASDMTGAELAV  242
            I PG I+T +++G+ + +  H      +L R+G ++++A    FLASD +S +TG  L V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  243  DGGMVL  248
            +GGM++
Sbjct  286  NGGMLI  291

953) CA347_2551 in NC_021554


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 104/257 (41%), Positives = 179/257 (70%), Gaps = 15/257 (5%)

Query  4    LENKVAVVTGAST--GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDNAKAYNV  61
            L+ K+A++TGA++  GIG+A+A+++AQ+GA V+ +D+ E+ +   D   + G+   +   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR--DAAATLGEGHLGLAA  103

Query  62   DISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPLDVYDKIMNVDMRGtflm  121
            +++DE QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++V +RGT+LM
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLDVSLRGTLLM  162

Query  122  tkmmlplmmtQG-GSIVNTSSFSGQ-AADLYRSG-YNAAKGAVINFTKSIAIEYGRDGIR  178
            ++ ++P M +QG GSIV  SS S+Q +++++ +  Y+AAK++V+ + K++A E+G D IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  ANAIAPGTIETPLVDKLTGTSEDEEGKAFRENQKWMTPLGRLGKPEEVGKLVVFLASDES  238
             N+IAPG I+T + + L    +DE   A+ E      PLGRLG +++V++  +FLASD S
Sbjct  223  INSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANAALFLASDLS  275

Query  239  SFITGETIRIDGGVMAY  255
            S++TG T+ ++GG++  
Sbjct  276  SYLTGITLDVNGGMLIH  292

954) fabG in NC_017531


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 174/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFEGKVALVTGAS--RGIGRAIAETLAARGAKVVGTATSQSGADAISDYLGDKGQGLLL  58
            M ++GK+A++TGA+  RGIGRA A T+A +GA+VV     +S+A   +  LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASVNSVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + V+  +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  kavmrammkkrmGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-NEDQRSGILAEVPAGRLGEAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L ++++R +I+  +P GRLG AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

955) PAGR_g2663 in NC_017554


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 174/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFEGKVALVTGAS--RGIGRAIAETLAARGAKVVGTATSQSGADAISDYLGDKGQGLLL  58
            M ++GK+A++TGA+  RGIGRA A T+A +GA+VV     +S+A   +  LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASVNSVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + V+  +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  kavmrammkkrmGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-NEDQRSGILAEVPAGRLGEAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L ++++R +I+  +P GRLG AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

956) fabG11 in NC_016816


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 174/246 (71%), Gaps = 5/246 (2%)

Query  1    MSFEGKVALVTGAS--RGIGRAIAETLAARGAKVVGTATSQSGADAISDYLGDKGQGLLL  58
            M ++GK+A++TGA+  RGIGRA A T+A +GA+VV     +S+A   +  LG+   GL  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDAASVNSVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLS  118
            NV+D + V+  +  I  +FG +D+LVNNAGIT+    + ++ ++ + +LD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  kavmrammkkrmGRIITIGSVVGTMgnag--qanyaaakagLIGFSKSLAREIASRGITV  176
            +AV+ +M  +  G I+ ++SV +  G +    ++Y+AAKAG++G++K++ARE+++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-NEDQRSGILAEVPAGRLGEAQEIANAVAFLASDEAAYITGETL  235
            N +APG+I+TD+T +L ++++R +I+  +P GRLG AQ++ANA  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

957) BC1003_5545 in NC_014540


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 106/262 (41%), Positives = 167/262 (64%), Gaps = 17/262 (6%)

Query  1    MLLKDKVVIVTGGS--RGIGRAIAVACATEGADVAINYWGDNDASYGRRSAVAEVVGQIE  58
            MLL++K+ I+TG++  RGIGRA AV+ A +GA V I   +++ A    R A A       
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAA----RDAAA-------  92

Query  59   ALGRRVIAIEGNVAARETGQQLVRETVAAFGKVDVLASNAGICPFHAFLDMPADILESTV  118
            +LG   +++ +NVA     +Q V   +  FG++DVL +NAGI      LD+ ++  +  +
Sbjct  93   TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVL  152

Query  119  AVNLNGAFYVTQAAAQQMKAQGTGGAIVATSSISALVGGGM--QTHYTPTKAGVHSLMQS  176
             V+L G++ ++QA    M+AQG+ G+IV  SS+SA  GGG+    HY+++KAGV +L ++
Sbjct  153  DVSLRGTLLMSQAVIPTMRAQGS-GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKA  211

Query  177  CAVALGPYGIRCNSVMPGTIATDLNAEDLADEAKKAYFEKRIPLGRLGRPEDVAECVVFL  236
             A  +GP  IR NS+ PG I TD+ +  + DE + A +E  IPLGRLG ++DVA+  +FL
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFL  270

Query  237  ASDRARYVTGAALLVDGGLFVN  258
            ASD + Y+TG +L V+GG++++
Sbjct  271  ASDLSSYLTGITLDVNGGMLIH  292

958) fabG in NC_011884


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (443),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 171/252 (68%), Gaps = 15/252 (5%)

Query  1    MADKVAIVTGAS--RGIGRSVALALGATGAKVVV-NYARSAGPANELVTeiaalggeaia  57
            + +K+AI+TGA+  RGIGR+ A++++  GA+VV+ +   SA+         A+LG   ++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA-----ATLGEGHLG  100

Query  58   vaaDVSQPEQVDSLVQTTLDRWGRVDVLVNNAGITRDTLLLRMSLEDWQAVIDLNLTGVF  117
            +AA+V++  QV   V T +++ GR+DVLVNNAGIT+    L +   D + V+D++L G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  118  LCTRAVSKLMLKQRSGRIINIASVAGQMGNP--GQANYSAAKAGVIGFTKTVAKELASRG  175
            L ++AV   M  Q SG I+ ++SV++Q G    G ++YSAAKAGV+G+ K++A+E+++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  176  ITVNAVAPGFITTDMTSNLKSEE----ILKYIPLGRYGQPEEVAGLVKFLAADPAAAYIT  231
            I +N++APG+I TD+T+ L  +E    I+  IPLGR G +++VA    FLA+D  ++Y+T
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LSSYLT  279

Query  232  GQVFNVDGGMVM  243
            G  ++V+GGM++
Sbjct  280  GITLDVNGGMLI  291

959) fabG in NC_010551


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (441),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 170/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARLGATVIGTATSESgaaaitagfaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGRA A+ +A+ GA V+     ES+A   +A ++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALHVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

960) Mpe_A0638 in NC_008825


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (442),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 105/245 (43%), Positives = 169/245 (69%), Gaps = 6/245 (2%)

Query  10   QVALVTGAS--RGIGRAIATTLAERGFKVVGTATSESGAAAIGEALAPLGGRGLVLNVND  67
            ++A++TGA+  RGIGRA A T+A++G +VV     ES+A   + +L+  G  GL  NV D
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAANVAD  107

Query  68   GAALEAAVDTIVKQDGGLHVLVNNAGITRDTLSMRMKDDDWDAVLDTNLKAVFRASRAVI  127
             + +  AV TI+ + G ++VLVNNAGIT+   ++ ++ +D D VLD +L++ +  S+AVI
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  128  RPMMKQRYGRIVNITSVVGASGNPg--qanyaaakagvagMTRSLARELGSRGITVNCVA  185
              M  Q  G IV ++SV +  G      ++Y+AAKAGV G+ +++ARE+G+  I +N +A
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIA  227

Query  186  PGFIATDMTDGL-PEAQKAALLGQIPLGRLGAPEEIADAVAFLASRQAGYITGTELHVNG  244
            PG+I TD+T+GL  + ++ A++  IPLGRLGA++++A+A  FLAS  ++Y+TG  L+VNG
Sbjct  228  PGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  245  GMFMN  249
            GM+++
Sbjct  288  GMLIH  292

961) M892_19965 in NC_022270


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (441),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 165/246 (68%), Gaps = 14/246 (5%)

Query  5    KVAVVTGAA--RGIGQAICEQLLEDGFHVVGLDIS-PVEWSQSAQLSNYQVNLC----DA  57
            K+A++TGAA  RGIG+A    + ++G +VV LD+  +  +  +A L++ ++ L     D 
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  58   AAVSEVVDSIVRQHGRIDALVNNAGITRDALLPDMLEQDWDSVIDVNLKAVFLLTQRVAP  117
            + V + V +I+ + GRID LVNNAGIT+     D+   D D V+DV+L++ +L++Q V P
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  118  VMLEQgtgsiv--sissivgtDGNIGQSNYGASKGGVISMSKGWAKELSRKGAQIRVNCV  175
             M  QG+GSIV  S  S    +G +G ++Y+A+K+GV++++K+ A+E++    QIR+N +
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD--QIRINSI  226

Query  176  APGFIATDMTKNL--PEKVIQMMEGKTPLGRMGSVQDIANGVSFLTSDKSAYITGHVLKI  233
            APG+I TD+T  L   E+   ++EG  PLGR+G+ QD+AN+  FL+SD S+Y+TG  L +
Sbjct  227  APGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  234  DGGLVL  239
            +GG+++
Sbjct  286  NGGMLI  291

962) VIBHAR_06461 in NC_009784


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (441),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 165/246 (68%), Gaps = 14/246 (5%)

Query  5    KVAVVTGAA--RGIGQAICEQLLEDGFHVVGLDIS-PVEWSQSAQLSNYQVNLC----DA  57
            K+A++TGAA  RGIG+A    + ++G +VV LD+  +  +  +A L++ ++ L     D 
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  58   AAVSEVVDSIVRQHGRIDALVNNAGITRDALLPDMLEQDWDSVIDVNLKAVFLLTQRVAP  117
            + V + V +I+ + GRID LVNNAGIT+     D+   D D V+DV+L++ +L++Q V P
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  118  VMLEQgtgsiv--sissivgtDGNIGQSNYGASKGGVISMSKGWAKELSRKGAQIRVNCV  175
             M  QG+GSIV  S  S    +G +G ++Y+A+K+GV++++K+ A+E++    QIR+N +
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD--QIRINSI  226

Query  176  APGFIATDMTKNL--PEKVIQMMEGKTPLGRMGSVQDIANGVSFLTSDKSAYITGHVLKI  233
            APG+I TD+T  L   E+   ++EG  PLGR+G+ QD+AN+  FL+SD S+Y+TG  L +
Sbjct  227  APGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  234  DGGLVL  239
            +GG+++
Sbjct  286  NGGMLI  291

963) BYI23_A019050 in NC_016589


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 178/251 (71%), Gaps = 12/251 (4%)

Query  1    MNLENQVAIVTGAS--RGIGRAIALELAKQGATVIGTATSESGAAGIGEALQQAGGKGR-  57
            M L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     ES+A + + +L    G G+ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHL  99

Query  58   GAVLDVTDAASSDAFIDGIVKEFGGLNILVNNAGITKDQLAMRMKDDEFDAVIDTNLRAV  117
            G   +V+D +     +  I+ +FG +++LVNNAGIT+   ++ ++ +++D V+D +LR+ 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FRLSRAVLRPMMKARG-GRIINITSVVGSSGNPg--qanyaaakagvagmtraLAREIGS  174
            + +S+AV+ P M+A+G G I+ ++SV +  G      ++Y+AAKAGV G+ +A+ARE+G+
Sbjct  160  LLMSQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  175  RGITVNCIAPGFIDTDMTK-VLPEEQRTALTASIPLGRLGAPEDIAHAVAFLASPFAGYI  233
              I +N IAPG+I+TD+T  ++ +E+R A+  +IPLGRLGA++D+A+A  FLAS +++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  234  TGTTLHVNGGM  244
            TG TL+VNGGM
Sbjct  279  TGITLDVNGGM  289

964) fabG in NC_011000


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRSIALELARLGATVIGTATSESGataitaafaeagvtGRGav  62
            L+ ++AI+TGA+  RGIGR+ A+ +A+ GA V+     ES+A   +A+++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

965) fabG in NC_011000


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRSIALELARLGATVIGTATSESGataitaafaeagvtGRGav  62
            L+ ++AI+TGA+  RGIGR+ A+ +A+ GA V+     ES+A   +A+++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

966) fabG-2 in NC_017454


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (440),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 173/249 (70%), Gaps = 8/249 (3%)

Query  1    MSLAGKIAVVTGAS--RGIGREIALRLAREGADVAVTATTLDSARKTADEIEQIGRRala  58
            M L GKIA++TGA+  RGIGR  A+ +A++GA V +      +AR +A  + + G+  L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GH--LG  100

Query  59   lavdvadaaavealfasvveafGKVDILVNNAGITRDGLLLRMKDADWDAVLDVNLKGAF  118
            LA +VAD + V    A+++E FG++D+LVNNAGIT+    L ++ +D D VLDV+L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCTREAAKLMTKARSGRIVNIGSVVGEMGNA--GQVNYCASKAGMIGMTKAVARELAKRG  176
              ++     M    SG IV ++SV ++ G +  G  +Y A+KAG++G+ KA+ARE++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVTPGFIETDMTA-VLSEKVRESLMQQIPLERFGSPEDIANAVHFLVSDMGSYITG  235
            I +N+++PG+I+TD+T+ ++ +  R+++++ IPL R+G+++D+ANA  FL SD++SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  HVLSVNGGM  244
              L VNGGM
Sbjct  281  ITLDVNGGM  289

967) fabG-2 in NC_002939


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (440),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 104/249 (42%), Positives = 173/249 (70%), Gaps = 8/249 (3%)

Query  1    MSLAGKIAVVTGAS--RGIGREIALRLAREGADVAVTATTLDSARKTADEIEQIGRRala  58
            M L GKIA++TGA+  RGIGR  A+ +A++GA V +      +AR +A  + + G+  L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GH--LG  100

Query  59   lavdvadaaavealfasvveafGKVDILVNNAGITRDGLLLRMKDADWDAVLDVNLKGAF  118
            LA +VAD + V    A+++E FG++D+LVNNAGIT+    L ++ +D D VLDV+L+G++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  NCTREAAKLMTKARSGRIVNIGSVVGEMGNA--GQVNYCASKAGMIGMTKAVARELAKRG  176
              ++     M    SG IV ++SV ++ G +  G  +Y A+KAG++G+ KA+ARE++   
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNAVTPGFIETDMTA-VLSEKVRESLMQQIPLERFGSPEDIANAVHFLVSDMGSYITG  235
            I +N+++PG+I+TD+T+ ++ +  R+++++ IPL R+G+++D+ANA  FL SD++SY+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  HVLSVNGGM  244
              L VNGGM
Sbjct  281  ITLDVNGGM  289

968) fabG in NC_021738


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (440),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 156/242 (65%), Gaps = 6/242 (2%)

Query  2    SKIALVTGAT--RGIGKAIAEELVAKGYIVVGTATSEKGAESISAYLGENGKGLVLNVAD  59
            +KIA++TGA+  RGIG+A A  +   G  VV     E +A   +A LGE   GL  NVAD
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  60   AESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFDIIQTNLTSVYRLSKAVL  119
               +   +  I E FG +DVLVNNAGIT+    + ++  D   +++ +L +   +S+AV+
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  120  RPMMKKG-GRIITIGSVVGSMGNS--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNVVA  176
              M  +G G I+ ++SV +  G +  G  +Y AAKAG++G++K++A+E ++  I +N +A
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIA  227

Query  177  PGFIATDMTDELTEDQ-KNAILSQIPAGELGSPQDIAKAVAFLASDDARYINGETIHVNG  235
            PG+I TD+T+ L +D+ ++AI+  IP G LG++QD+A+A  FLASD + Y+ G T++VNG
Sbjct  228  PGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  236  GL  237
            G+
Sbjct  288  GM  289

969) TCCBUS3UF1_10010 in NC_017278


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (440),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 164/246 (67%), Gaps = 10/246 (4%)

Query  1    MRLKDKVILITGAA--HGIGRATLELFAREGARLIACDLEEGPLGEAASA--TGAMPLVM  56
            M L++K+ +ITGAA  +GIGRAT   FA++GAR++  DL+E++  +AA++   G + L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  57   DVADPTSVEGGFREALAAFGRLDGVVHYAGITRDNFHWKMPLEDWEAVLRVNLTGSFLVA  116
            +VAD + V  +    +  FGR+D +V+ AGIT+      +   D + VL V+L G++L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  117  RAASEAMRERNPGSIV----LTASRVYLGNLGQANYAASKAGVVGLMRTLALELGRWGIR  172
            +A   +MR + +GSIV    ++A R   G +G ++Y+A+KAGV+GL +++A E+G   IR
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRG-GGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  173  VNALAPGFIETRMTAK-VPEKVREKAIAATPLGRAGKPLEVAYAALFLVSEESSFITGQV  231
            +N++APG+I+T +T+  + +  R+  I + PLGR G + +VA AALFL S+ SS++TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  232  LFVDGG  237
            L V+GG
Sbjct  283  LDVNGG  288

970) Swoo_2042 in NC_010506


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (438),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 104/244 (43%), Positives = 165/244 (68%), Gaps = 5/244 (2%)

Query  7    LAGKVALVTGAS--RGIGRAVAETLvaagarvvgtatSERGAAAIQEYlgdnglglvlnv  64
            L GK+A++TGA+  RGIGRA A T+   GARVV     E +A      LG+  LGL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDGQSVTDLFAAIKEKEGDVNILVNNAGITRDNLLMRMKDDEWGDIIDTNLTSIFRTSKA  124
            +D   V +  A+I E  G +++LVNNAGIT+    + ++ ++ + ++D +L + +  S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRPMMKKRHGRIINIGSVVGSMGNP--GQTNYCAAKAGLIGFTKSLAKEVASRQITVNA  182
            V+  M  +  G I+ ++SV +  G    G  +Y AAKAG++G+ K++A+E ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDEL-TEEQQQGIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L  +E++++I+  +P+ RLG AQ++ANA LFLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

971) fabG in NC_014500


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (439),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 103/246 (42%), Positives = 169/246 (69%), Gaps = 5/246 (2%)

Query  1    MNFEGKIALVTGAS--RGIGRAIAETLAARGATVIGTATSDKGAADISEWLGPKGKGYAL  58
            M ++GKIA++TGA+  RGIGRA A T+A +GA V+     + +A D +  LG    G A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSASIESVLASIKEAFGDIDILVNNAGITRDDLMMRMKDEAWQEVLDTNLSSVFRLS  118
            NV+D + +   +A+I E FG ID+LVNNAGIT+    + ++    + VLD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRAMMKKRFGRIITVGSVIGSRgnag--qanyaaakagLVGFSKSLAQEVASRGITV  176
            +AV+ +M  +  G I+ ++SV + RG +    ++Y+AAKAG++G++K++A+E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TEEQRVGILANVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+  +P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

972) DaAHT2_1286 in NC_014216


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (439),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 166/252 (66%), Gaps = 9/252 (3%)

Query  1    MSLQDKVALVTGGS--RGIGRAVALRLAAMGAMTIVNYVSRPEAAQAVADEIARAGGRAE  58
            M LQ+K+A++TG++  RGIGRA A+ +A  GA  ++  +  + A +A A   + + G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAA---TLGEGHLG  100

Query  59   ISQFNVADSAATEAAIKKIMDDHGRLDILVNNAGITRDGLLVKMKEEQWDEVLATNLKGA  118
            ++  NVAD +    A+  I+++ GR+D+LVNNAGIT+    + ++  + D VL  +L+G+
Sbjct  101  LAA-NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FTCTKAVSRAMMKQRWGRIVNISSVIGFAGNA--GQSNYAAAKAGLVGLTRSVARELAPR  176
            +  ++AV  +M  Q  G IV +SSV +  G +  G ++Y+AAKAG++GL +++ARE++P 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NITVNGVAPGYIVTDMTKDL-PEEINQRIRAEIPLGVLGEAEDVAGAVAYLVSDEARYVT  235
            +I +N++APG I TD+T +L  +E  + I   IPLG LG A+DVA A  +L SD + Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQFIHVNGGMYM  247
            G  ++VNGGM +
Sbjct  280  GITLDVNGGMLI  291

973) KPHS_26350 in NC_016845


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (439),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 160/251 (64%), Gaps = 10/251 (3%)

Query  1    MKLASKTAIVTGAA--RGIGFGIAQVLAREGARVIIadrdahgeaaaaSLRESGAQALFI  58
            M L +K AI+TGAA  RGIG + A  +A++GARV+I D D  +   AA+    G  +L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL--  101

Query  59   SCNIAEKTQVEALFSQAEEAFGPVDILVNNAGINRDAMLHKLTEADWDTVIDVNLKGTFL  118
            + N+A+ +QV    +   E FG +D+LVNNAGI +      +  +D D V+DV+L+GT+L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CMQQAAIR-MRERGAGRII--NIASASWLGNV-GQTNYSASKAGVVGMTKTACRELAKKG  174
             M QA I  MR +G+G I+  +  SA + G + G  +YSA+KAGV+G+ K+  RE++   
Sbjct  162  -MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  175  VTVNAICPGFIDTDMTRGV-PENVWQIMISKIPAGYAGEAKDVGECVAFLASDGARYING  233
            + +N+I PG+I+TD+T G+  ++ ++ +I  IP G  G A+DV++   FLASD + Y+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  234  EVINVGGGMVL  244
              ++V GGM++
Sbjct  281  ITLDVNGGMLI  291

974) N559_2610 in NC_022082


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (439),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 160/251 (64%), Gaps = 10/251 (3%)

Query  1    MKLASKTAIVTGAA--RGIGFGIAQVLAREGARVIIadrdahgeaaaaSLRESGAQALFI  58
            M L +K AI+TGAA  RGIG + A  +A++GARV+I D D  +   AA+    G  +L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL--  101

Query  59   SCNIAEKTQVEALFSQAEEAFGPVDILVNNAGINRDAMLHKLTEADWDTVIDVNLKGTFL  118
            + N+A+ +QV    +   E FG +D+LVNNAGI +      +  +D D V+DV+L+GT+L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CMQQAAIR-MRERGAGRII--NIASASWLGNV-GQTNYSASKAGVVGMTKTACRELAKKG  174
             M QA I  MR +G+G I+  +  SA + G + G  +YSA+KAGV+G+ K+  RE++   
Sbjct  162  -MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  175  VTVNAICPGFIDTDMTRGV-PENVWQIMISKIPAGYAGEAKDVGECVAFLASDGARYING  233
            + +N+I PG+I+TD+T G+  ++ ++ +I  IP G  G A+DV++   FLASD + Y+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  234  EVINVGGGMVL  244
              ++V GGM++
Sbjct  281  ITLDVNGGMLI  291

975) fabG in NC_017540


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (439),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 160/251 (64%), Gaps = 10/251 (3%)

Query  1    MKLASKTAIVTGAA--RGIGFGIAQVLAREGARVIIadrdahgeaaaaSLRESGAQALFI  58
            M L +K AI+TGAA  RGIG + A  +A++GARV+I D D  +   AA+    G  +L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL--  101

Query  59   SCNIAEKTQVEALFSQAEEAFGPVDILVNNAGINRDAMLHKLTEADWDTVIDVNLKGTFL  118
            + N+A+ +QV    +   E FG +D+LVNNAGI +      +  +D D V+DV+L+GT+L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CMQQAAIR-MRERGAGRII--NIASASWLGNV-GQTNYSASKAGVVGMTKTACRELAKKG  174
             M QA I  MR +G+G I+  +  SA + G + G  +YSA+KAGV+G+ K+  RE++   
Sbjct  162  -MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  175  VTVNAICPGFIDTDMTRGV-PENVWQIMISKIPAGYAGEAKDVGECVAFLASDGARYING  233
            + +N+I PG+I+TD+T G+  ++ ++ +I  IP G  G A+DV++   FLASD + Y+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  234  EVINVGGGMVL  244
              ++V GGM++
Sbjct  281  ITLDVNGGMLI  291

976) fabG in NC_021232


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (439),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 160/251 (64%), Gaps = 10/251 (3%)

Query  1    MKLASKTAIVTGAA--RGIGFGIAQVLAREGARVIIadrdahgeaaaaSLRESGAQALFI  58
            M L +K AI+TGAA  RGIG + A  +A++GARV+I D D  +   AA+    G  +L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL--  101

Query  59   SCNIAEKTQVEALFSQAEEAFGPVDILVNNAGINRDAMLHKLTEADWDTVIDVNLKGTFL  118
            + N+A+ +QV    +   E FG +D+LVNNAGI +      +  +D D V+DV+L+GT+L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CMQQAAIR-MRERGAGRII--NIASASWLGNV-GQTNYSASKAGVVGMTKTACRELAKKG  174
             M QA I  MR +G+G I+  +  SA + G + G  +YSA+KAGV+G+ K+  RE++   
Sbjct  162  -MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  175  VTVNAICPGFIDTDMTRGV-PENVWQIMISKIPAGYAGEAKDVGECVAFLASDGARYING  233
            + +N+I PG+I+TD+T G+  ++ ++ +I  IP G  G A+DV++   FLASD + Y+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  234  EVINVGGGMVL  244
              ++V GGM++
Sbjct  281  ITLDVNGGMLI  291

977) Namu_0877 in NC_013235


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (439),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 155/225 (69%), Gaps = 7/225 (3%)

Query  26   LAAEGAVVVVTDVDEQSAVHTAKELGGGSDRHVGLRVDVTDRACVTAMVTAVTERFGRID  85
            +A +GA VV+ D+DE +A ++A  LG G   H+GL  +V+D + V   V+++ E+FGRID
Sbjct  70   FAQHGARVVILDLDESAARDAAATLGEG---HLGLAANVADESQVKQAVATIIEHFGRID  126

Query  86   VLVNNAGWDKVGPFVDSDEADWDRVIKINLYGVLNTTKAVLPIMVGQGHGHVVNLGSDAG  145
            VLVNNAG  +    +D   +D D+V+ ++L G L  ++AV+P M +QG G +V ++S ++
Sbjct  127  VLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSA  186

Query  146  RVGSS--GEAVYSAAKGGVIAFTKAVAREMARHQVTVNCVCPGPTDTPLFASIGGDNPKL  203
            + G++  G + YSAAK+GV+++ KA+ARE + +Q+ +N + PG  +T + +++  D+   
Sbjct  187  QRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDER--  244

Query  204  RDALTKAIPLRRLADPSDLANAVAFFASEEASYITGQTVSVSGGL  248
            R+A+  +IPL RL+ + D+ANA  F+AS+ +SY+TG T+ V+GG+
Sbjct  245  RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGM  289

978) Dd586_1586 in NC_013592


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (438),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 102/246 (42%), Positives = 171/246 (70%), Gaps = 5/246 (2%)

Query  1    MNFEGKVALVTGAS--RGIGRAIAEMLAARGAIVIGTATSEKGAADISEWLGPKGKGYAL  58
            M ++GK+A++TGA+  RGIGRA A  +A +GA V+     E +A D +  LG    G A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDSASIESVLASIKEAFGDIDILVNNAGITRDDLMMRMKDDAWQEVLDTNLSSVFRLS  118
            NV+D + +   +A+I E FG ID+LVNNAGIT+    + ++ +  + VLD +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRAMMKKRFGRIITVGSVIGSRgnag--qanyaaakagLVGFSKSLAQEVASRGITV  176
            +AV+ +M  +  G I+ ++SV + RG +    ++Y+AAKAG++G++K++A+E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TEEQRAGILAGVPASRLGDPKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  +E+R +I+ G+P +RLG ++++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

979) A79E_2527 in NC_018522


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (438),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 160/251 (64%), Gaps = 10/251 (3%)

Query  1    MKLASKTAIVTGAA--RGIGFGIAQVLAREGARVIIadrdahgeaaaaSLRESGAQALFI  58
            M L +K AI+TGAA  RGIG + A  +A++GARV+I D D  +   AA+    G  +L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL--  101

Query  59   SCNIAEKTQVEALFSQAEEAFGPVDILVNNAGINRDAMLHKLTEADWDTVIDVNLKGTFL  118
            + N+A+ +QV    +   E FG +D+LVNNAGI +      +  +D D V+DV+L+GT+L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CMQQAAIR-MRERGAGRII--NIASASWLGNV-GQTNYSASKAGVVGMTKTACRELAKKG  174
             M QA I  MR +G+G I+  +  SA + G + G  +YSA+KAGV+G+ K+  RE++   
Sbjct  162  -MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  175  VTVNAICPGFIDTDMTRGV-PENVWQIMVSKIPAGYAGEAKDVGECVAFLASDGARYING  233
            + +N+I PG+I+TD+T G+  ++ ++ ++  IP G  G A+DV++   FLASD + Y+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  234  EVINVGGGMVL  244
              ++V GGM++
Sbjct  281  ITLDVNGGMLI  291

980) fabG in NC_012731


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (438),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 160/251 (64%), Gaps = 10/251 (3%)

Query  1    MKLASKTAIVTGAA--RGIGFGIAQVLAREGARVIIadrdahgeaaaaSLRESGAQALFI  58
            M L +K AI+TGAA  RGIG + A  +A++GARV+I D D  +   AA+    G  +L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL--  101

Query  59   SCNIAEKTQVEALFSQAEEAFGPVDILVNNAGINRDAMLHKLTEADWDTVIDVNLKGTFL  118
            + N+A+ +QV    +   E FG +D+LVNNAGI +      +  +D D V+DV+L+GT+L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CMQQAAIR-MRERGAGRII--NIASASWLGNV-GQTNYSASKAGVVGMTKTACRELAKKG  174
             M QA I  MR +G+G I+  +  SA + G + G  +YSA+KAGV+G+ K+  RE++   
Sbjct  162  -MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  175  VTVNAICPGFIDTDMTRGV-PENVWQIMVSKIPAGYAGEAKDVGECVAFLASDGARYING  233
            + +N+I PG+I+TD+T G+  ++ ++ ++  IP G  G A+DV++   FLASD + Y+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  234  EVINVGGGMVL  244
              ++V GGM++
Sbjct  281  ITLDVNGGMLI  291

981) AciX9_0137 in NC_015064


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (437),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 163/248 (66%), Gaps = 17/248 (6%)

Query  16   LSGKISLVTGGS--RGIGREIALALAKAGSDVALIGRTAGPDAYAVVDEIRAMGRQAFVY  73
            L GKI+++TG++  RGIGR  A+++A+ G+ V +++     D  A  D   ++G   +  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILD----LDESAARDAAATLGEGHLGL  101

Query  74   FADLSKaaqaasvvqqaasELGPISILVNNAGI-NPSKPLEQISTEDWDETIAVNLSSAF  132
             A+++  +Q    V     ++G I +LVNNAGI +P K L+ I   D D  + V+L +++
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD-IRPGDYDKVLDVSLRGTL  160

Query  133  YVTQAVLPAMRAQRWGRIIMLSSVAAQLGGVI--GPHYAASKAGIIGLVHGYASLLAKEG  190
             ++QAV+P+MRAQ  G I+ +SSV+AQ GG I  GPHY+A+KAG++GL  + A  ++ + 
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  191  ITVNSIAPALIETDM---LKGNDRIKPTL--IPLGRFGTVDEVASVALMLAEN--GYMTG  243
            I +NSIAP+LI+TD+   L  ++R  + +  IPLGR+G+ ++VA+ AL LA +  +Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  244  QTINVNGG  251
             T++VNGG
Sbjct  281  ITLDVNGG  288

982) fabG in NC_021743


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (437),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 155/242 (65%), Gaps = 6/242 (2%)

Query  2    SKIALVTGAT--RGIGKAIAEELVAKGYIVVGTATSEKGAESISAYLGENGKGLVLNVAD  59
            +KIA++TGA+  RGIG+A A  +   G  VV     E +A   +A LGE   GL  NVAD
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  60   AESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFDIIQTNLTSVYRLSKAVL  119
               +   +  I E FG +DVLVNNAGIT+    + ++  D   +++ +L +   +S+AV+
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  120  RPMMKKG-GRIITIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNVVA  176
              M  +G G I+ ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N +A
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIA  227

Query  177  PGFIATDMTDELTEDQ-KNAILSQIPAGELGSPQDIAKAVAFLASDDARYINGETIHVNG  235
            PG+I TD+T+ L +D+ ++AI+  IP G LG++QD+A+A  FLASD + Y+ G T++VNG
Sbjct  228  PGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  236  GL  237
            G+
Sbjct  288  GM  289

983) fabG in NC_021739


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (437),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 155/242 (65%), Gaps = 6/242 (2%)

Query  2    SKIALVTGAT--RGIGKAIAEELVAKGYIVVGTATSEKGAESISAYLGENGKGLVLNVAD  59
            +KIA++TGA+  RGIG+A A  +   G  VV     E +A   +A LGE   GL  NVAD
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  60   AESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFDIIQTNLTSVYRLSKAVL  119
               +   +  I E FG +DVLVNNAGIT+    + ++  D   +++ +L +   +S+AV+
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  120  RPMMKKG-GRIITIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNVVA  176
              M  +G G I+ ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N +A
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIA  227

Query  177  PGFIATDMTDELTEDQ-KNAILSQIPAGELGSPQDIAKAVAFLASDDARYINGETIHVNG  235
            PG+I TD+T+ L +D+ ++AI+  IP G LG++QD+A+A  FLASD + Y+ G T++VNG
Sbjct  228  PGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  236  GL  237
            G+
Sbjct  288  GM  289

984) fabG1 in NC_021082


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (437),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 155/242 (65%), Gaps = 6/242 (2%)

Query  2    SKIALVTGAT--RGIGKAIAEELVAKGYIVVGTATSEKGAESISAYLGENGKGLVLNVAD  59
            +KIA++TGA+  RGIG+A A  +   G  VV     E +A   +A LGE   GL  NVAD
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  60   AESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFDIIQTNLTSVYRLSKAVL  119
               +   +  I E FG +DVLVNNAGIT+    + ++  D   +++ +L +   +S+AV+
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  120  RPMMKKG-GRIITIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNVVA  176
              M  +G G I+ ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N +A
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIA  227

Query  177  PGFIATDMTDELTEDQ-KNAILSQIPAGELGSPQDIAKAVAFLASDDARYINGETIHVNG  235
            PG+I TD+T+ L +D+ ++AI+  IP G LG++QD+A+A  FLASD + Y+ G T++VNG
Sbjct  228  PGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  236  GL  237
            G+
Sbjct  288  GM  289

985) D648_22610 in NC_020834


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (437),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 155/242 (65%), Gaps = 6/242 (2%)

Query  2    SKIALVTGAT--RGIGKAIAEELVAKGYIVVGTATSEKGAESISAYLGENGKGLVLNVAD  59
            +KIA++TGA+  RGIG+A A  +   G  VV     E +A   +A LGE   GL  NVAD
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  60   AESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFDIIQTNLTSVYRLSKAVL  119
               +   +  I E FG +DVLVNNAGIT+    + ++  D   +++ +L +   +S+AV+
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  120  RPMMKKG-GRIITIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNVVA  176
              M  +G G I+ ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N +A
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIA  227

Query  177  PGFIATDMTDELTEDQ-KNAILSQIPAGELGSPQDIAKAVAFLASDDARYINGETIHVNG  235
            PG+I TD+T+ L +D+ ++AI+  IP G LG++QD+A+A  FLASD + Y+ G T++VNG
Sbjct  228  PGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  236  GL  237
            G+
Sbjct  288  GM  289

986) D650_3580 in NC_020833


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (437),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 155/242 (65%), Gaps = 6/242 (2%)

Query  2    SKIALVTGAT--RGIGKAIAEELVAKGYIVVGTATSEKGAESISAYLGENGKGLVLNVAD  59
            +KIA++TGA+  RGIG+A A  +   G  VV     E +A   +A LGE   GL  NVAD
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  60   AESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFDIIQTNLTSVYRLSKAVL  119
               +   +  I E FG +DVLVNNAGIT+    + ++  D   +++ +L +   +S+AV+
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  120  RPMMKKG-GRIITIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNVVA  176
              M  +G G I+ ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N +A
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIA  227

Query  177  PGFIATDMTDELTEDQ-KNAILSQIPAGELGSPQDIAKAVAFLASDDARYINGETIHVNG  235
            PG+I TD+T+ L +D+ ++AI+  IP G LG++QD+A+A  FLASD + Y+ G T++VNG
Sbjct  228  PGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  236  GL  237
            G+
Sbjct  288  GM  289

987) fabG in NC_021883


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (437),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 155/242 (65%), Gaps = 6/242 (2%)

Query  2    SKIALVTGAT--RGIGKAIAEELVAKGYIVVGTATSEKGAESISAYLGENGKGLVLNVAD  59
            +KIA++TGA+  RGIG+A A  +   G  VV     E +A   +A LGE   GL  NVAD
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVAD  107

Query  60   AESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFDIIQTNLTSVYRLSKAVL  119
               +   +  I E FG +DVLVNNAGIT+    + ++  D   +++ +L +   +S+AV+
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVI  167

Query  120  RPMMKKG-GRIITIGSVVGSMGNP--GQTNYCAAKAGLVGFSKSLAKEVASRGITVNVVA  176
              M  +G G I+ ++SV +  G    G  +Y AAKAG++G++K++A+E ++  I +N +A
Sbjct  168  PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIA  227

Query  177  PGFIATDMTDELTEDQ-KNAILSQIPAGELGSPQDIAKAVAFLASDDARYINGETIHVNG  235
            PG+I TD+T+ L +D+ ++AI+  IP G LG++QD+A+A  FLASD + Y+ G T++VNG
Sbjct  228  PGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNG  287

Query  236  GL  237
            G+
Sbjct  288  GM  289

988) fabG in NC_011959


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  120 bits (437),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 98/244 (41%), Positives = 158/244 (65%), Gaps = 11/244 (4%)

Query  8    AIVTGAV--RGIGRATALRLARDGFKVVVNYRGDEALAQALVEEIQAA-GGTAIAFRADV  64
            AI+TGA   RGIGRATA+ +A++G +VV+       L ++   +  A+ G   +++ A+V
Sbjct  51   AIITGAASERGIGRATAVTFAQHGARVVIL-----DLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDPEQVGAMVQAAIDQFGRLDALVNNAGITRDTLLLRMRDEDWHAVLETNLTSVFYCCRA  124
            +D  QV   V + I++FGR+D LVNNAGIT+    L +R  D + VL+ +L + +   +A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  ALRPMLRQRYGRIVNLSSVSGLIGN--IGQTNYAAAKAGIIGFSKALAREVASRGITVNV  182
             +  M  Q  G IV +SSVS+  G   +G  +Y+AAKAG++G++KA+ARE ++  I +N 
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  VAPGFIQTRLTEAL-PAELQQKLLEQIPIGFYGTPEDVAEAIAFLVSPGARYITGAVLAV  241
            +APG+I+T +T +L   E ++ ++E IP+G  G+++DVA+A  FL S  + Y+TG  L V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  DGGL  245
            +GG+
Sbjct  286  NGGM  289

989) GEM_2396 in NC_018513


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 169/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARLGATVIGTATSESgaaaitagfaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGRA A+ +A+ GA V+     ES+A   +A ++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALHVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQVALKTQIPLGRLGSPADIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG++ D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

990) Aasi_0105 in NC_010830


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 166/247 (68%), Gaps = 9/247 (3%)

Query  6    GKTALITGAS--RGIGKSIAHAFAEQGANIVFTHLSSEEQAQAVVDELKSFGVKVCAYRS  63
            GK A+ITGA+  RGIG++ A +FA++GA +V+ +L  E  A+     L    + + A  +
Sbjct  48   GKIAIITGAASERGIGRATAVTFAQHGARVVILDLD-ESAARDAAATLGEGHLGLAANVA  106

Query  64   DASNFTAVNDLVQEIIKEFGGLDILVNNAGITRDNLLLRMGEQDWDDVIQVNLKSAFNTV  123
            D S+   V++ V  II +FG +D+LVNNAGIT+    L +   D D V++V+L++++   
Sbjct  107  DESQ---VKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  124  KAAAKPMISQRsgsiinissvvgiKGNA--GQANYAASKAGMIGFTKSIALELGSRNIRC  181
            +A    M +Q SGSI+ +SSV + +G +  G ++Y+A+KAG++G+ K++A E+G+ +IR 
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  182  NAIAPGFIQTAMTEEL-PEATVAEWVKHIPLRRMGTTEDVAKCALFLASDAASYITGQVI  240
            N+IAPG+I+T +T  L  +      +  IPL R+G+++DVA+ ALFLASD +SY+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  QVDGGML  247
            +V+GGML
Sbjct  284  DVNGGML  290

991) fabG in NC_015856


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 164/248 (67%), Gaps = 9/248 (3%)

Query  11   LIGQVALVTGAS--RGIGRAIALQLLQRGAKVVGTATSEAGAAAISEYLEASQPGNGRGI  68
            L G++A++TGA+  RGIGRA A+ + Q+GA+VV     E++A   +  L  ++ G    +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLG----L  101

Query  69   VLDVNDAAGCAAAVELAHKEFGGLSILVNNAGITKDQLAMRMKDEDWDAVISTNLTAVAR  128
              +V D +    AV     +FG + +LVNNAGIT+   ++ ++  D D V+  +L +   
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  129  LSRAVLRGMMKAKHGRIINITSVVGSAGNP--GQMNYAAAKAGVSGMSRALAREIGSRNI  186
            +S+AV+  M     G I+ ++SV +  G    G  +Y+AAKAGV G+++A+ARE+G+ +I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  187  TVNCVAPGFIDTDMTKAL-GEEQHAALLQQIPLGRLGaaeevaaavvFLASPQASYITGS  245
             +N +APG+I+TD+T +L  +E++ A+++ IPLGRLGAA++VA A +FLAS  +SY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  246  TLHVNGGM  253
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

992) FraEuI1c_2671 in NC_014666


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 94/229 (42%), Positives = 155/229 (68%), Gaps = 5/229 (2%)

Query  3    VLAEKVAIISGAA--RGQGLAEAERFVAEGARVVLVDRLAEAVEAAAGRLGDAARFVAGD  60
            +L  K+AII+GAA  RG G A A  F  +GARVV++D    A   AA+ LG++   +A++
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAAN  104

Query  61   VADERAWTDAVALATDQFGGVDILVNNAGVMVSRSLVDTDEATFRDVLDTNLVGAYLGIR  120
            VADE    +AVA   ++FG +D+LVNNAG+  +   +D   + +  VLD +L G+ L  +
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  121  AVVPAMRARGGGAIVNTASAAGLKAIPM--GSAYVASKFGLRGLSRAAALELGRHQIRVN  178
            AV+P+MRA+G+G+IV  +S ++ ++  +  G+ Y A+K G+ GL++A A E+G +QIR+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  179  CVCPGLVRTEMAADLLRYHEKEALAN-IPLGIAAEATDVADLVLFLVSD  226
             + PGL++T+++++L++ + ++A+ + IPLG  + A DVA+  LFL SD
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD  273

993) Neut_0468 in NC_008344


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 175/252 (70%), Gaps = 8/252 (3%)

Query  1    MILEHKITLVTGAS--RGIGKAIALELGKYGATVIGTATSESGADHINQYLGEAHVSGMG  58
            M+L+ KI+++TGA+  RGIG+A A+ +++ GA V+     ES+A +    LGE+H   +G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH---LG  100

Query  59   LVMDVSNIEHINNGIETIQKSLGDVAILVNNAGITRDNLLARMKDDEWDSVLQTNLKSVF  118
            L  +V++  ++++++ TI   +G + +LVNNAGIT+      ++ ++ D VL+ +L++ +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  CLSRAVLRAMMKARSGRIINISSVVGTTGNP--GQTNYAAAKAGMMGFSKSLAKEIGSRN  176
             +S+AV+ +M    SG I+ +SSV +  G    G  +Y+AAKAG++G++K++A+E+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNCVAPGFIDTDMTRslssdlqqsliqH-IPLGRLGRPEDvaaavvflaspaaDYITG  235
            I +N +APG+I+TD+T +L  D ++  I + IPLGRLG ++DVA A +FLAS  + Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATLHVNGGMYME  247
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

994) fabG in NC_017860


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 168/252 (67%), Gaps = 15/252 (5%)

Query  3    LLTGKTALITgaargigkaiaikfaSEGANIAFTD-----LVIDENGKATEAEISALGVK  57
            LL GK A+ITGAA   G        + ++ ++F++     +++D +  A+    ++LG  
Sbjct  45   LLQGKIAIITGAASERGI-------GRATAVTFAQHGARVVILDLDESAARDAAATLGEG  97

Query  58   CKGYASNAADFAQSeevvkqvkeeFGSIDVLVNNAGITKDGLMLRMTEAQWDAVIAVNLK  117
              G A+N AD +Q  + V  + E+FG IDVLVNNAGIT+    L +  ++ D V+ V+L+
Sbjct  98   HLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  118  SAFNFIHACIPVMLRQRGGSIINMASVVGVHGNA--GQANYAASKAGMIALAKSVAQEMG  175
            +++   +A IP M  Q +GSI+ M+SV + +G +  G ++Y+A+KAG+++L+K++A+E G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  PKGLRANAIAPGFIETAMTQQLSDDIRKE-WASKIPLRRGGTTEDVANTALYLASDLSSY  234
            P  +R N+IAPG+I+T +T  L +D R++     IPL R G+++DVAN+AL+LASDLSSY
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VSGQVIQVDGGM  246
            ++G  ++V+GGM
Sbjct  278  LTGITLDVNGGM  289

995) fabG in NC_018142


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 163/248 (66%), Gaps = 11/248 (4%)

Query  4    LKDKIAIVTGGS--RGIGRTIALELARHGCQvavvyasssaaaEETCAEIRKMSTRAEAY  61
            L++KIAI+TG++  RGIGR+ A+ +A+HG +V ++    SAA + + +    ++    + 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT----LGEGHLGL  101

Query  62   RCDVSDPAQCRTVVRRIMDDFGRVDVLVNNAGIVRDAVAASIKDEDLAAVLDTNLKGAVH  121
              +V+D +Q +  V  I+++FGR+DVLVNNAGI +   +  I+  D   VLD +L+G++ 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  MIRECYFGFIRQRSGSIINVSSVVALLGGT--GQATYAAAKAGLIGLTKSVAREVAARGV  179
            M +        Q SGSI+ +SSV A  GG   G + Y+AAKAG++GL K++ARE ++  +
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  RCNAIAPGIIETEMTEFMQGDESRLAL---VPMRRFGKPTEVANLVVFLAGDASSYITGE  236
            R N+IAPG+I+T++T  +  DE R A+   +P+ R+G + +VAN  +FLA+D SSY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  237  VIRVDGGL  244
             + V+GG+
Sbjct  282  TLDVNGGM  289

996) fabG1 in NC_017574


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 174/248 (71%), Gaps = 10/248 (4%)

Query  5    LNNQVALVTGAS--RGIGRAIALELARQGATVVGTATSDAGAQAISAYFAEAGVKGAGVV  62
            L+ ++A++TGA+  RGIGRA A+ +A++GA VV     +++A+  +A ++E+ +   G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAARCEAVIDETIKTHGGLNILVNNAGITQDNLAMRMKDDEWTAVIDTNLSAVFRL  122
             NV D ++    +   I   G +++LVNNAGITQ   ++ ++ ++   V+D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQANYAAAKAGVEGMARALAREIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G ++Y+AAKAGV G+++A+ARE+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNSIAPGFIDTDMT-KVLSEEQHTALKAQIPLGRLGMPEDIasavaflaspaaGYITGA  238
             +NSIAPG+I+TD+T  ++ +E++ A+   IPLGRLG ++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

997) BC1002_4237 in NC_014118


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (433),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 105/262 (41%), Positives = 168/262 (65%), Gaps = 17/262 (6%)

Query  1    MLLKDKVVIVTGGS--RGIGRAIAVACAREGADVAINYWGDNDASYGRRSAveevvgeie  58
            MLL++K+ I+TG++  RGIGRA AV+ A++GA V I    D D S +R +A     G+  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVIL---DLDESAARDAAATLGEGH--  98

Query  59   glgrrvIAVEGNVAARDTGQDLVRRTVDEFGKVDVLASNAGICPFHAFLDMPAEVLESTV  118
                  +++ +NVA     ++ V   +++FG++DVL +NAGI      LD+ +   +  +
Sbjct  99   ------LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVL  152

Query  119  AVNLNGAFFVTQAAAQQMKKQGSGGAIVATSSISALVGGGM--QTHYTPTKAGVHSLMQS  176
             V+L G+++++QA    M+ QGS G+IV  SS+SA  GGG+    HY+++KAGV +L ++
Sbjct  153  DVSLRGTLLMSQAVIPTMRAQGS-GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKA  211

Query  177  CAIALGPFGIRCNSVMPGTIATDLNAEDLADEAKKAYFEKRIPLGRLGHPDDVADCVVFL  236
             A  +GP  IR NS+ PG I TD+ +  + DE + A +E  IPLGRLG ++DVA+  +FL
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFL  270

Query  237  ASDRARYVTGAALLVDGGLFVN  258
            ASD + Y+TG +L V+GG++++
Sbjct  271  ASDLSSYLTGITLDVNGGMLIH  292

998) fabG in NC_009648


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (436),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 160/251 (64%), Gaps = 10/251 (3%)

Query  1    MKLASKTAIVTGAA--RGIGFGIAQVLAREGARVIIadrdahgeaaaaSLRESGAQALFI  58
            M L +K AI+TGAA  RGIG + A  +A++GARV+I D D  +   AA+    G  +L  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGL--  101

Query  59   SCNIAEKTQVEALYSQAEEAFGPVDILVNNAGINRDAMLHKLTEADWDTVIDVNLKGTFL  118
            + N+A+ +QV    +   E FG +D+LVNNAGI +      +  +D D V+DV+L+GT+L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  119  CMQQAAIR-MRERGAGRII--NIASASWLGNV-GQTNYSASKAGVVGMTKTACRELAKKG  174
             M QA I  MR +G+G I+  +  SA + G + G  +YSA+KAGV+G+ K+  RE++   
Sbjct  162  -MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  175  VTVNAICPGFIDTDMTRGV-PENVWQIMVSKIPAGYAGEAKDVGECVAFLASDGARYING  233
            + +N+I PG+I+TD+T G+  ++ ++ ++  IP G  G A+DV++   FLASD + Y+ G
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  234  EVINVGGGMVL  244
              ++V GGM++
Sbjct  281  ITLDVNGGMLI  291

999) vfu_B01436 in NC_016628


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (436),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 159/247 (65%), Gaps = 7/247 (2%)

Query  4    QQKVAVVTGAA--RGIGRAISEQLLEDGFKVVGLDISPVEWASLEQTRNERVSSYQVNLC  61
            Q K+A++TGAA  RGIGRA +  + ++G +VV LD+          T  E   +   N+ 
Sbjct  47   QGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVA  106

Query  62   DAQAVAQTVACIAEQHQRVDVLVNNAGITRDAMLTDMLESDWNSVLDVNLKAVFLLTQKI  121
            D   V Q+VA I E+  R+DVLVNNAGIT+     D+  +D + VLDV+L++ +L++Q +
Sbjct  107  DESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAV  166

Query  122  APLMLAQgsgsiv--nissivgTDGNIGQSNYGASKGGVIAMSKGWAKELARKGAQIRVN  179
             P M AQGSGSIV  +  S    +G +G ++Y+A+K+GV++++K+ A+E++    QIR+N
Sbjct  167  IPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD--QIRIN  224

Query  180  CVAPGFIETDMTKEL-PEKVIGYMTSKTPLGRMGSVQDIADGVSFLVSDKSRFITGQVLK  238
             +APG+I+TD+T  L  +     +    PLGR+G+ QD+A++  FL SD S ++TG  L 
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  IDGGLVL  245
            ++GG+++
Sbjct  285  VNGGMLI  291

1000) OCQ_16430 in NC_016948


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  119 bits (436),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 93/218 (43%), Positives = 149/218 (69%), Gaps = 9/218 (4%)

Query  41   HGANVVLADLDEATVKSTADKLDS--IGVACDVTADADVQRLVDQAVAEHGKLDLFVNNA  98
            HGA VV+ DLDE++ + +A  L+   +G+A +V+ +++V++ V   + + G++D++VNNA
Sbjct  73   HGARVVILDLDESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNA  132

Query  99   GITRDASMRKMTVVDFDAVVTVSLRGTWLGVRHACAVMREQKSGSIVNISSLSGKSGNP-  157
            GIT+      +   D+D V+ VSLRGT L  +   + MR Q SGSIV +SS+S++ G   
Sbjct  133  GITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGI  192

Query  158  -GQTNYSAAKAGIVGLTKAAAKEVAHHNVRVNAIQPGLIRTPMTEAMRPEVFAEREA---  213
             G  +YSAAKAG++GL KA A+E + +++R+N+I PGLI+T +T ++  +    R+A   
Sbjct  193  FGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQD--ERRHAIIE  250

Query  214  AVPMKragraeevagavvFLGSDLSSYITGAVLEVGGG  251
            ++P+ R G A++VA A +FL+SDLSSY+TG  L+V GG
Sbjct  251  GIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGG  288

1001) fabG in NC_014307


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 174/248 (71%), Gaps = 10/248 (4%)

Query  5    LNNQVALVTGAS--RGIGRAIALELARQGATVVGTATSDAGAQAISAYFAEAGVKGAGVV  62
            L+ ++A++TGA+  RGIGRA A+ +A++GA VV     +++A+  +A ++E+ +   G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAARCEAVIDETIKTHGGLNILVNNAGITQDNLAMRMKDDEWTAVIDTNLSAVFRL  122
             NV D ++    +   I   G +++LVNNAGITQ   ++ ++ ++   V+D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQANYAAAKAGVEGMARALAREIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G ++Y+AAKAGV G+++A+ARE+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNSIAPGFIDTDMT-KVLSEEQHTALKAQIPLGRLGMPEDIasavaflaspaasYITGA  238
             +NSIAPG+I+TD+T  ++ +E++ A+   IPLGRLG ++D+A+A  FLAS  +SY+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1002) fabG_2 in NC_015577


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 102/249 (41%), Positives = 173/249 (70%), Gaps = 6/249 (2%)

Query  1    MELQDKKALVTGAS--RGIGRAIADRFIAAGAEVWGIGTKEPEDMGERIEKASGRLHWVS  58
            M LQ+K A++TGA+  RGIGRA A  F   GA V  ++  E+   +     + G+L  ++
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLG-LA  102

Query  59   ADLGDLAATEKLAESLLKESGGFDILVNNAGITRDNLSFRMTLDDFQKVLDVNLTAAFLI  118
            A+++D +   +   +++ + G +D+LVNNAGIT+   ++ +  +D++KVLDV+L +++L+
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  119  SRTIGRDMIRRRAGSIINMSSVVGIHGNG--GQANYSASKAGLIGLTKSLAQEVASRGVR  176
            S+++   M  + +GSI+ MSSV + +G G  G ++YSA+KAG++GL K++A+E ++  +R
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  177  VNAIAPGFIASDMTNA-MAAEAKEKTIEHIPLKRIGQPEDIAEaalflasasssYITGQI  235
            +N+IAPG+I +D+T + M  E ++  IE IPL R+G ++D+A+AALFLAS  SSY+TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  236  IAVDGGMFI  244
            + V+GGM+I
Sbjct  283  LDVNGGMLI  291

1003) Dd703_1587 in NC_012880


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  118 bits (429),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 170/246 (70%), Gaps = 5/246 (2%)

Query  1    MSFKGKIALVTGAS--RGIGRAIAETLVARGATVIGTATSEKGAAEISSWLGEKGKGYML  58
            M ++GKIA++TGA+  RGIGRA A T+  +GA V+     E +A + ++ LGE   G   
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  59   NVTDVTSIEQVLSAIQKEFGDIDILVNNAGITRDNLLIRMKDEEWKEVLETNLSSVFRLS  118
            NV+D + + Q +++I  +FG ID+LVNNAGIT+    + ++  +   VL+ +L + + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  KAVLRAMMKKRFGRIITVGSVIGTRgnag--qanyaaakagLVGFSKSLAYEVASRGITV  176
            +AV+ +M  +  G I+ ++SV + RG +    ++Y+AAKAG++G++K++A E ++  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NVVAPGFIETDMTRAL-TDEQRAGILADVPANRLGDAKEIASAVAFLASDEAGYITGETL  235
            N +APG+I+TD+T +L  DE+R +I+ ++P  RLG A+++A+A  FLASD ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

1004) Mnod_3070 in NC_011894


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 103/250 (42%), Positives = 183/250 (74%), Gaps = 10/250 (4%)

Query  5    LTGRVAVVTGSA--RGIGLSIVRLLAERGASVVVTDINVEAGESSAAELRKEGHNAIFIA  62
            L G++A++TG+A  RGIG +    +A++GA VV+ D++  A+  +AA L  EGH ++  A
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGHLGL--A  102

Query  63   ADISKETDVIQLIATAIDKLGSIGILVNNAGIVSTGPVTDIDLQ--HWQRLIDIDLTSVF  120
            A+++ E++V Q +AT I+ +G I++LVNNAGI  T P+  +D++  + ++++D+ L + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGI--TQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  LLVKAVLPHMMERRSGRIINIASVAglngggllgnSCYAAAKGGVIAFSKGIAREAGQHG  180
            L+ +AV+P M  + SG I+ ++SV++  GGG++G + Y+AAK+GV++++K++ARE G + 
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  181  VTSNVICPALTETDMTASMPEAQRRR-IIDAIPLGRAGKPNEvaaavaflasddasfITG  239
            +  N I P+L +TD+T+++ + +RR+ II++IPLGR G +++VA A  FLASD +S++TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  240  ATLEVDGGFM  249
             TL+V+GG +
Sbjct  281  ITLDVNGGML  290

1005) fabG in NC_014311


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  118 bits (429),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 173/248 (70%), Gaps = 10/248 (4%)

Query  5    LNNQVALVTGAS--RGIGRAIALELARQGAIVVGTATSEAGAQAISAYFAEAGVKGAGVV  62
            L+ ++A++TGA+  RGIGRA A+ +A++GA VV     E++A+  +A ++E+ +   G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAARCEVVIDETIKTHGGLNILVNNAGITQDNLAMRMKDEEWTAVIDTNLSAVFRL  122
             NV D ++    +   I   G +++LVNNAGITQ   ++ ++  +   V+D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQANYAAAKAGVEGMARAMAKEIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G ++Y+AAKAGV G+++AMA+E+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNSIAPGFIDTDMT-KVLSEEQHTALKAQIPLGRLGMPEDIasavaflaspaaGYITGA  238
             +NSIAPG+I+TD+T  ++ +E++ A+   IPLGRLG ++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1006) PBPRB1562 in NC_006371


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  118 bits (429),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 87/214 (41%), Positives = 145/214 (68%), Gaps = 8/214 (3%)

Query  6    DMNASVMADLESTYSNVR-ALELNVCDRNSIGVAIAKINAEFGHIDVLVNNAGITRD-NL  63
            D++ S   D  +T ++ + +L  NV D + +  A+A I  +FG+IDVLVNNAGIT+  + 
Sbjct  81   DLDESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKT  140

Query  64   LDKMTEEEWDMVADVNLKGVFNMTQAIAPIMIENGIGSIITMSSVVGTDGN--IGQSNYA  121
            LD +   + D V DV+L+G + M+QA+ P M  +G GSI+ MSSV +  G   +G ++Y+
Sbjct  141  LD-IRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYS  199

Query  122  ATKGGVIAMTKGWSKEFSRKGAQVRANCIAPGFIETPMTKDL-PEKVLDYMTNKTPLKRM  180
            A+K+GV+++ K+ ++EF+    Q+R N IAPG+I+T +T +L  +   + + +  PL R+
Sbjct  200  AAKAGVLGLGKAMAREFGP--DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRL  257

Query  181  GKPTDIAEGALFLASERSSFITGQTLKIDGGLVI  214
            G + D+A++ALFLAS+ SS++TG TL ++GG++I
Sbjct  258  GAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

1007) fabG in NC_012856


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 101/248 (41%), Positives = 173/248 (70%), Gaps = 10/248 (4%)

Query  5    LNNQVALVTGAS--RGIGRAIALELARQGATVVGTATSEAGVQAITAYFAEAGVKGTGVV  62
            L+ ++A++TGA+  RGIGRA A+ +A++GA VV     E++ +  +A ++E+ +   G+ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAARCEAVIDETIKTHGGLNILVNNAGITQDNLAMRMKDDEWVSVIDTNLSAVFRL  122
             NV D ++    +   I   G +++LVNNAGITQ   ++ ++ ++   V+D +L + + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQANYAAAKAGVEGMSRALAREIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G ++Y+AAKAGV G+++A+ARE+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCIAPGFIDTDMT-KVLSEEQHTALKAQIPLGRLGAPEDIasavaflaspaaGYITGS  238
             +N IAPG+I+TD+T  ++ +E++ A+   IPLGRLGA++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1008) fabG in NC_007510


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  117 bits (428),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRSIALELARLGATVigtatsesgaaaitaafaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGR+ A+ +A+ GA V+     ES+A   +A+++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1009) fabG in NC_008060


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  117 bits (428),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRSIALELARLGATVigtatsesgaaaitaafaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGR+ A+ +A+ GA V+     ES+A   +A+++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1010) fabG in NC_008542


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  117 bits (428),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRSIALELARLGATVigtatsesgaaaitaafaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGR+ A+ +A+ GA V+     ES+A   +A+++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1011) fabG in NC_010508


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  117 bits (428),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRSIALELARLGATVigtatsesgaaaitaafaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGR+ A+ +A+ GA V+     ES+A   +A+++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNP--GQVNYAAAKAGVAGMTRALAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G    G  +Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1012) fabG3 in NC_014640


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 163/248 (66%), Gaps = 11/248 (4%)

Query  5    LTGKVAVITGSG--RGIGYASALALAQEGARIVITDINPESVEQAVGSLQQAGHDAIGAV  62
            L GK+A+ITG++  RGIG A+A+++AQ+GAR+VI D++  +  +A ++L   G++ +G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL---GEGHLGLA  102

Query  63   LDVCDPEQV-QTMAELAAHKFGGIDILVNNAGFTRDKYLLKMPVEDWDSVVDTILKGAYY  121
             +V D  QV Q++A +  H FG ID+LVNNAG+T+    L +   D D V+D  L+G+  
Sbjct  103  ANVADESQVKQAVATIIEH-FGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  CTKAALPSMMERKWGRVINIAS-RAHWGNP--GQTNYSAAKAGLIGFTRALALEQGKFNI  178
             ++A +P+M  +  G ++ ++S  A++G    G  +YSAAKAG++G+ +A+A E G  +I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  179  TANAIAPGLIETPLVRGLSTYETLRANALARQPVPRLGAVEDIANAVAFLASERSSFITG  238
              N+IAPGLI+T +  GL   E  R   +   P+ RLGA +D+ANA  FLAS+ SS++TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  ELLHVTGG  246
              L+V GG
Sbjct  281  ITLDVNGG  288

1013) DSY2660 in NC_007907


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 102/250 (41%), Positives = 172/250 (69%), Gaps = 9/250 (3%)

Query  1    MLLNNSVAIVTGGS--RGIGRAIALELARAGAKVVVNYAGHGEKAEETLSLIQEAGGEAL  58
            MLL+  +AI+TG++  RGIGRA A+ +A+ GA+VV+   +++   + + +L    G   L
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHL  99

Query  59   AVQADVSQVEDVERLIQTTLKTYGKIDILVNNAGITRDTLLLRMKETDWDAVLDTNLKGV  118
            ++ A+V++  +V + + T +  +G+ID+LVNNAGIT+    L ++  D D VLD +L+G 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCTKAVSKSMMKQRsgviinissvvgitgnagqany--aaakagiigFTKSIAKELGSR  176
            +L ++AV  +M  Q SG I+ +SSV +  G +  +    +AAKAG++G+ K++A+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GIRVNAVAPGYISTDMTESL-GEEVREQVMTQIPLGRMGQPEDIAKTVVFLASPAASYIT  235
             IR+N++APG I TD+T +L  +E R+ ++  IPLGR+G ++D+A++ +FLAS  +SY+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLAVDGGM  245
            G TL V+GGM
Sbjct  280  GITLDVNGGM  289

1014) PSJM300_01960 in NC_018177


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  117 bits (426),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 103/253 (41%), Positives = 167/253 (67%), Gaps = 10/253 (3%)

Query  1    MKLRNKVALVTGSS--HGIGLGIARRLAEEGAAVVLNGRKEGEPAREAVAQVRALGGRAC  58
            M L+ K+A++TG++  +GIG + A  +A++GA VV+ +  E+ +AR+A A   +LG    
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDES-AARDAAA---TLGEGHL  99

Query  59   FIAADVGSVADCRRLVAQAVEQMGGLDILVNNAGIQKHAAFLDAREEDFDDVLGVNLRGP  118
             +AA+V+  ++ ++ VA  +E+ G +D+LVNNAGI +    LD R  D+D VL+V+LRG 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FFLSQAFARHLRDSGRGGRIINNSSVHEELPFPNF--SDYCASKGGLKMLMRNLAIELAP  176
            +++SQA    +R  G +G I+  SSV  +     F  ++Y A+K+G+  L + +A E++P
Sbjct  160  LLMSQAVIPTMRAQG-SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  177  LGITVNNVAPGAIETPINRSLMNQPDKLANLLGNIPAGRLGQPRDVAGAVAFLASDDAGY  236
              I +N++APG I+T I  +LM Q ++   ++  IP GRLG ++DVA A  FLASD ++Y
Sbjct  219  DQIRINSIAPGLIHTDITGGLM-QDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  237  VTGITLVVDGGLL  249
            +TGITL V+GG+L
Sbjct  278  LTGITLDVNGGML  290

1015) Deipr_1937 in NC_015161


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 104/254 (41%), Positives = 167/254 (66%), Gaps = 7/254 (2%)

Query  4    QEHPLFGLRGQVALITGGGS--GLGLQMAEALTEMGASVVLCarklerceaaaaalrerg  61
            Q  PL  L+G++A+ITG++S  G+G   A ++++ GA VV+         AA  A    G
Sbjct  39   QRTPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI---LDLDESAARDAAATLG  95

Query  62   aqalaVACNVTDPasvqaavqaavDEFGRLDILVNNAGTTWAAPTEDMTLEQWNKVMDTN  121
               L++A NV+D + V+ AV + +++FGR+D+LVNNAG T +  T D+   + +KV+D +
Sbjct  96   EGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVS  155

Query  122  LTGVFLCSQAAGRVMLAQGSGSIINIASVAGLRGTPSHFPVIGYSASKGGVITFTRDLAW  181
            L G +L SQA    M AQGSGSI+ ++SV++ RG  + F    YSA+K+GV+ + + +A+
Sbjct  156  LRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGG-GIFGGPHYSAAKAGVLGLGKAMAR  214

Query  182  KWGPRGIRVNAIAPGWFPSDMSRVLLERYEKE-FLAAIPLGRFGGEQDLKGAAIFLASRA  240
              GP  IR+N+IAPG + +D++  L++   ++ ++ +IPLGR+G+ QD+  AA+FLAS  
Sbjct  215  EFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  241  SAYMTGQVLVVDGG  254
            S+Y+TG  L V+GG
Sbjct  275  SSYLTGITLDVNGG  288

1016) fabG in NC_010622


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 170/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQIAIVTGAS--RGIGRAIAIELARQGAMVIGTATSESGANAISEAFKAEGLNGRGAV  62
            L+ +IAI+TGA+  RGIGRA A+ +A++GA V+     ES+A   + ++    L   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNVNDAAGIETLIDGTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDNVMDTNLRSVFRL  122
             NV D + +   +   + +FG ++VLVNNAGITQ   ++ ++  D D+V+D +LR+ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNPg--qanyaaakagvagmtraLAREIGSRNI  179
            S+AV+ P M+A+G G I+ ++SV +  G      ++Y+AAKAGV G+ +A+ARE+G+ +I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQTALKAQIPLGRLGSPEDIAHAVTFLASPRAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1017) SABB_01205 in NC_021670


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 139/206 (68%), Gaps = 11/206 (5%)

Query  20   GDNAKAYNVDNASEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAADRIHEYPIDVYDKIMN  79
            G+   +   + A E QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLD  153

Query  80   VDMRGTFLMTKMMLPLMMNQG-GSIVNTSSFSGQ-AADLYRSG-YNAAKGAVINFTKSIA  136
            V +RGT+LM++ ++P M  QG GSIV  SS S+Q +++++ +  Y+AAK++V+ + K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  137  IEYGRDSIRANAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKL  196
             E+G D IR N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+ 
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANA  266

Query  197  VVFLASDDSSFITGETIRIDGGVMAY  222
             +FLASD SS++TG T+ ++GG++  
Sbjct  267  ALFLASDLSSYLTGITLDVNGGMLIH  292

1018) BN843_25120 in NC_021059


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 139/206 (68%), Gaps = 11/206 (5%)

Query  20   GDNAKAYNVDNASEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAADRIHEYPIDVYDKIMN  79
            G+   +   + A E QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLD  153

Query  80   VDMRGTFLMTKMMLPLMMNQG-GSIVNTSSFSGQ-AADLYRSG-YNAAKGAVINFTKSIA  136
            V +RGT+LM++ ++P M  QG GSIV  SS S+Q +++++ +  Y+AAK++V+ + K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  137  IEYGRDSIRANAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKL  196
             E+G D IR N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+ 
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANA  266

Query  197  VVFLASDDSSFITGETIRIDGGVMAY  222
             +FLASD SS++TG T+ ++GG++  
Sbjct  267  ALFLASDLSSYLTGITLDVNGGMLIH  292

1019) SAOUHSC_02772 in NC_007795


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 139/206 (68%), Gaps = 11/206 (5%)

Query  20   GDNAKAYNVDNASEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAADRIHEYPIDVYDKIMN  79
            G+   +   + A E QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLD  153

Query  80   VDMRGTFLMTKMMLPLMMNQG-GSIVNTSSFSGQ-AADLYRSG-YNAAKGAVINFTKSIA  136
            V +RGT+LM++ ++P M  QG GSIV  SS S+Q +++++ +  Y+AAK++V+ + K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  137  IEYGRDSIRANAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKL  196
             E+G D IR N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+ 
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANA  266

Query  197  VVFLASDDSSFITGETIRIDGGVMAY  222
             +FLASD SS++TG T+ ++GG++  
Sbjct  267  ALFLASDLSSYLTGITLDVNGGMLIH  292

1020) codY in NC_017347


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 139/206 (68%), Gaps = 11/206 (5%)

Query  20   GDNAKAYNVDNASEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAADRIHEYPIDVYDKIMN  79
            G+   +   + A E QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLD  153

Query  80   VDMRGTFLMTKMMLPLMMNQG-GSIVNTSSFSGQ-AADLYRSG-YNAAKGAVINFTKSIA  136
            V +RGT+LM++ ++P M  QG GSIV  SS S+Q +++++ +  Y+AAK++V+ + K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  137  IEYGRDSIRANAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKL  196
             E+G D IR N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+ 
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANA  266

Query  197  VVFLASDDSSFITGETIRIDGGVMAY  222
             +FLASD SS++TG T+ ++GG++  
Sbjct  267  ALFLASDLSSYLTGITLDVNGGMLIH  292

1021) SATW20_26000 in NC_017331


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 139/206 (68%), Gaps = 11/206 (5%)

Query  20   GDNAKAYNVDNASEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAADRIHEYPIDVYDKIMN  79
            G+   +   + A E QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLD  153

Query  80   VDMRGTFLMTKMMLPLMMNQG-GSIVNTSSFSGQ-AADLYRSG-YNAAKGAVINFTKSIA  136
            V +RGT+LM++ ++P M  QG GSIV  SS S+Q +++++ +  Y+AAK++V+ + K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  137  IEYGRDSIRANAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKL  196
             E+G D IR N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+ 
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANA  266

Query  197  VVFLASDDSSFITGETIRIDGGVMAY  222
             +FLASD SS++TG T+ ++GG++  
Sbjct  267  ALFLASDLSSYLTGITLDVNGGMLIH  292

1022) SAUSA300_2416 in NC_007793


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 139/206 (68%), Gaps = 11/206 (5%)

Query  20   GDNAKAYNVDNASEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAADRIHEYPIDVYDKIMN  79
            G+   +   + A E QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLD  153

Query  80   VDMRGTFLMTKMMLPLMMNQG-GSIVNTSSFSGQ-AADLYRSG-YNAAKGAVINFTKSIA  136
            V +RGT+LM++ ++P M  QG GSIV  SS S+Q +++++ +  Y+AAK++V+ + K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  137  IEYGRDSIRANAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKL  196
             E+G D IR N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+ 
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANA  266

Query  197  VVFLASDDSSFITGETIRIDGGVMAY  222
             +FLASD SS++TG T+ ++GG++  
Sbjct  267  ALFLASDLSSYLTGITLDVNGGMLIH  292

1023) SAVC_11230 in NC_016912


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 139/206 (68%), Gaps = 11/206 (5%)

Query  20   GDNAKAYNVDNASEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAADRIHEYPIDVYDKIMN  79
            G+   +   + A E QV + V+ I E+FGRIDVL NNAG+ ++   ++  P D YDK+++
Sbjct  95   GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGD-YDKVLD  153

Query  80   VDMRGTFLMTKMMLPLMMNQG-GSIVNTSSFSGQ-AADLYRSG-YNAAKGAVINFTKSIA  136
            V +RGT+LM++ ++P M  QG GSIV  SS S+Q +++++ +  Y+AAK++V+ + K++A
Sbjct  154  VSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMA  213

Query  137  IEYGRDSIRANAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKL  196
             E+G D IR N+IAPG I+T + + L    +D+   ++ E      PLGRLG +++VA+ 
Sbjct  214  REFGPDQIRINSIAPGLIHTDITGGLM---QDERRHAIIEG----IPLGRLGAAQDVANA  266

Query  197  VVFLASDDSSFITGETIRIDGGVMAY  222
             +FLASD SS++TG T+ ++GG++  
Sbjct  267  ALFLASDLSSYLTGITLDVNGGMLIH  292

1024) AZC_1961 in NC_009937


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (425),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 103/253 (41%), Positives = 166/253 (66%), Gaps = 8/253 (3%)

Query  1    MTLQGRIAVITGAASGIgrataarladagaavalvdrdaEGLAATADAITQAGGQALVLP  60
            M LQG+IA+ITGAAS  G + A+ ++ A  +  +V  D +  AA   A T + G+ L L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH-LGLA  102

Query  61   GDVGapeaveaaaaQVRGTYGGIDILIAAAGMSVGGTVLTTRPEDWDAVFRANVGGTWLW  120
            ++V+    V  A A +   +G ID+L+  AG++     L  RP D D V+  ++ GT L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  121  ARAVIPSMRERGGGAIVTFSSQLALAGGR--GNSAYVAAKGAILSLTRTMALDFAADNIR  178
            ++AVIP+MR +G+G+IV  SS  A  GG   G + Y AAK+++L+L ++MA +F++D+IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  VNAIAPGAVETPMLARGFGRQADPDAAREASRQRHALGRFGTADEIAQAALYLASDASSF  238
            +N+IAPG ++T + + G+ ++   +A  E+     +LGR+G+A+++A+AAL+LASD SS+
Sbjct  223  INSIAPGLIHTDITG-GLMQDERRHAIIEGI----PLGRLGAAQDVANAALFLASDLSSY  277

Query  239  ITGTTLAVDGGWL  251
            +TG TL V+GG L
Sbjct  278  LTGITLDVNGGML  290

1025) MASE_07910 in NC_018632


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (424),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 102/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGKGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKESVDTTIKTINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ TI E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-TDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1026) Gmet_2249 in NC_007517


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (424),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 104/250 (42%), Positives = 163/250 (66%), Gaps = 13/250 (5%)

Query  4    LDGKVAIVTGGA--RGMGQTTAEVFVQEGASVVIVDVLDVEGEALAKRLGRNTMYQHLDV  61
            L+GK+AI+TG+A  RG+G++TA  F Q+GA VVI+D+ +  +   A  LG   +    +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   TDEQGWEQLVEGIIDRYGCIDILVNNAAVFFSSPID--ETRSEAFRRILDINLIGPYLGM  119
            +DE    Q V  II+++G ID+LVNNA++  + PI   + R+  + ++LD++L G  L  
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGI--TQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  120  KAVIPTMKKNRRGSIINVSSVNGLRgssg--sgaysasKWGVRGLTKCVAMEVGPFGIRV  177
            +AVIPTM+ +  GSI+ +SSV++ RG++   +  YSA+K GV GL K +A E GP  IR+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  178  NSLHPGWIVTPMNNPDGKSFEEVNAELKIKFPGIALSRVGQSEEIARASLFLASDDSSYI  237
            NS+ PG I T +    G   ++   +  I   GI+L+R+G ++++A A+LFLASD SSY+
Sbjct  224  NSIAPGLIHTDIT---GGLMQDERRHAIIE--GIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  238  SGAELAVDGA  247
            +G  L V+G+
Sbjct  279  TGITLDVNGG  288

1027) Meso_3434 in NC_008254


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  116 bits (424),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 95/233 (41%), Positives = 155/233 (67%), Gaps = 18/233 (7%)

Query  25   FLREGMRVVIADIDGEKGTRSLKSLEKLGEAWFA-KADVGRSLDVHNLIAFTIDALGDID  83
            F ++G RVVI D+D E ++R   +   LGE+ ++  A+V+   +V + +A  I+ +G ID
Sbjct  70   FAQHGARVVILDLD-ESAARD--AAATLGEGHLGLAANVADESQVKQAVATIIEHFGRID  126

Query  84   VLVNNAGIAHGADFLDLREEDFDRVLRVNLKGAFLVGQAAARFMVEKVQNGGPAGAIINM  143
            VLVNNAGI++    LD+R  D+D+VL V+L+G++L++QA    M  + Q    +G+I+ M
Sbjct  127  VLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTM--RAQG---SGSIVCM  181

Query  144  SSVNA-----VFAIADQVPYSISKGGVNQLTKVMALALAPHGIRVNAIGPGSIMTDMLTS  198
            SSV+A     +F+ ++   YS +K+GV  L K MA  ++P+ IR+N+I+PG I TD+  +
Sbjct  182  SSVSAQRGGGIFGGPH---YSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGG  238

Query  199  VNDDPDARERILSRTPLGRIGDPQEIASIAAFLASDEASYITGQTIYADGGRL  251
            + +D + R+ I+   PLGR+G +Q++A+ A FLASD +SY+TG T+  +GG L
Sbjct  239  LMQD-ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGML  290

1028) Ssed_2624 in NC_009831


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 103/244 (43%), Positives = 162/244 (67%), Gaps = 5/244 (2%)

Query  7    LTGKVALVTGAS--RGIGRavaetlvaagatvvgtatSERGAAAIQEYlgdnglglvlnv  64
            L GK+A++TGA+  RGIGRA A T+   GA VV     E +A      LG+  LGL  NV
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDSQSVTDLFAQIKEKSGDVSILVNNAGITRDNLLMRMKEDEWSDIIDTNLTSLFRTSKA  124
            +D   V +  A I E  G + +LVNNAGIT+    + ++ ++   ++D +L + +  S+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VMRPMMKKRNGRIINIGSVVGSMGNP--GQTNYCAAKAGLIGFTKSLAREVASRQITVNA  182
            V+  M  + +G I+ ++SV +  G    G  +Y AAKAG++G+ K++ARE ++ QI +N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  183  IAPGFIQTDMTDEL-TEEQQQGIMSQVPMERLGQAQEIANAVVFLASDSAAYITGETLHV  241
            IAPG+I+TD+T+ L  +E++++I+  +P+ RLG AQ++ANA +FLASD ++Y+TG TL+V
Sbjct  226  IAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  242  NGGM  245
            NGGM
Sbjct  286  NGGM  289

1029) AMBAS45_08495 in NC_018679


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGKGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKESVDTTIKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-TDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1030) AMBLS11_07895 in NC_018692


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGKGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKESVDTTIKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-TDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1031) AMEC673_08000 in NC_018678


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGKGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKESVDTTIKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-TDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1032) amad1_09100 in NC_019393


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGQGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKDSVDATLKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-SDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1033) I633_08990 in NC_021716


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGQGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKDSVDATLKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-SDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1034) I607_08015 in NC_021710


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGQGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKDSVDATLKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-SDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1035) I876_08280 in NC_021717


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGQGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKDSVDATLKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-SDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1036) I634_08385 in NC_021712


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGQGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKDSVDATLKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-SDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1037) I636_08815 in NC_021714


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGQGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKDSVDATLKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-SDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1038) I635_09085 in NC_021713


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 170/245 (70%), Gaps = 6/245 (2%)

Query  4    LDGKIALVTGAS--RGIGKAIATQLAQQGATVIGTATSENGAQAISDYLSEFGGQGFALN  61
            L+GKIA++TGA+  RGIG+A A  +AQ+GA V+     E++A+  +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKDSVDATLKAINEAHGGIDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFTLSK  121
            V+D   V  ++ +I E  G ID+LVNNAGIT+    + ++ ++ + ++D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgsagnag--qanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +    ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKAL-SDDQKEAIFKDIPANRLGEPDEIAATVAFLVSDGAAYITGETIH  238
             +APG+I+TD+T +L  D++++AI+ +IP  RLG ++++A +  FL SD ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1039) fabG7 in NC_014640


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 103/254 (41%), Positives = 157/254 (62%), Gaps = 11/254 (4%)

Query  7    LLDQRSIIVTGAA--QGIGRAISELAMQLGARVTAVDMNADALAAFEREAPQGQLLTLAG  64
            LL+ +  I+TGAA  +GIGRA +    Q GARV  +D++  A         +G+L  LA+
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL-GLAA  103

Query  65   DVSDPafaeaavaqtaERFGTVDGLVNNAGITRTAMIEKMTQEAWQKVIDVHLTGSFQFL  124
            +V+D +    AVA   E+FG +D LVNNAGIT+      +     +KV+DV L G++   
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  125  QAVGRHMLATARETGKPGGSVVNITSDAGRRG--TIGQINYAAAKSGVLGLTMSAAREWG  182
            QAV    ++T R  G  +GS+V ++S +++RG   +G  +Y+AAK+GVLGL  + ARE G
Sbjct  164  QAV----IPTMRAQG--SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  183  KYGIRVNTIGFGVVETPMTETIRGDKFRDTYLSQIPLGRFGQPEEVAWPVCFLLSDAASY  242
               IR+N+I+ G+++T +T  +  D  R++ +  IPLGR+G +++VA +  FL SD +SY
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  243  MTGQHLYANGGMTI  256
            +TG  L  NGGM I
Sbjct  278  LTGITLDVNGGMLI  291

1040) Anamo_1485 in NC_018024


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 153/247 (62%), Gaps = 21/247 (8%)

Query  10   LEGKVAAVTGAAS--GIGYATAEILAKFGAQVVLLDVDEAKGELSAQKIVDQGGKACFMK  67
            L+GK+A +TGAAS  GIG ATA  +A+ GA+VV+LD+DE+ +   A   +++G  +  + 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAAR-DAAATLGEGHLG--LA  102

Query  68   CDVTSEKACKTVIEEIKDKFGRLDILHNNAGIIIRKTVVELDEKEWDLAVDVCLKGTYLL  127
             +V+ E   K  +  I + FGR+D+L NNAGI      +++   + D  +DV L+GT L+
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  128  SKHAIPLMAAggggsiintgsgwgLKGGE--KAASYCAAKGGVVNLTRAMAIDHGRDNIR  185
            S+  IP M A G+GSI+  +S  + +GG    ++ Y AAK+GV+ L +AMA + G D+IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  186  VNCVCPG----DIDTPLLRGEARQLGVSEEKFLQSSASERPLGRIGTPQDVANAVLFLAS  241
            +N + PG    DI   L+++E R          ++     PLGR+G++QDVANA LFLAS
Sbjct  223  INSIAPGLIHTDITGGLMQDERR----------HAIIEGIPLGRLGAAQDVANAALFLAS  272

Query  242  DLSKWIT  248
            DLS  +T
Sbjct  273  DLSSYLT  279

1041) CSSP291_10160 in NC_020260


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (418),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 86/212 (41%), Positives = 143/212 (68%), Gaps = 8/212 (3%)

Query  43   PARETAAKVHALGRRFVAIDADLAT-APVQPLVTEAVDALGRIDVLVNNAGIIRRDDALD  101
            +AR++AA   +LG   +++ A++A  + V+  V+  ++ +GRIDVLVNNAGI +   +LD
Sbjct  86   AARDAAA---TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD  142

Query  102  FSEKDWDDVMDLNLKALFFLSQAVARQFIAQGSGGKIINVASMLSFQGG--IRVPSYTAS  159
            +   D D V+D++L++ +++SQAV     AQGSG+ I+ ++S+ + +GG  +  P Y+A+
Sbjct  143  IRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGS-IVCMSSVSAQRGGGIFGGPHYSAA  201

Query  160  KSGVLGLTRLLANEWAPYGINVNGIAPGYMATNNTQALREDAERNEEILARIPAGRWGTP  219
            K+GVLGL + +A E +P  I +N+IAPG + T+ T +L +D ER + I+  IP GR G++
Sbjct  202  KAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQD-ERRHAIIEGIPLGRLGAA  260

Query  220  EDLQGPVIFLASKASDYVNGYTLAVDGGWLAR  251
            +D+  + +FLAS  S Y+ G TL V+GG L +
Sbjct  261  QDVANAALFLASDLSSYLTGITLDVNGGMLIH  292

1042) Rmar_2801 in NC_013501


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 163/248 (66%), Gaps = 9/248 (3%)

Query  5    FSGQSVLVTGGT--RGIGRAIVEAFAKAGARVAFTYRSSVqeaealkaqlaaqGTEVLaf  62
            + G+  ++TG++  RGIGRA   +FA+ GARV +       +  A +   A+ G   L++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVIL----DLDESAARDAAATLGEGHLGL  101

Query  63   qadaadfeaaGRVVEAVLEAWGKIDVLVNNAGITRDNLLLRMSEADWDAVLAANLKSVFN  122
             A+ AD     + V +++E  G+IDVLVNNAGIT+    L +  +D D VL  +L++ + 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  123  FCKQVYRPMMRQrsgriinissvvgvvgnA--GQTNYAASKAGIIGFSKSLARELGSRGI  180
              + V   M  Q SG I+ +SSV +  G +  G  +Y+A+KAG++G++K++ARE+G+  I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  181  TVNVVAPGYIETDMTAAL-PEQARQAMLSGIPLGRPGTPEDVAQAVLFLASPAAGYITGH  239
             +N +APG I+TD+T++L  ++ R+A++ GIPLGR G+++DVA+A LFLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  240  VLHVDGGM  247
             L+V+GGM
Sbjct  282  TLDVNGGM  289

1043) fabG in NC_016010


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 162/246 (66%), Gaps = 8/246 (3%)

Query  5    LQGEIALVTGAS--RGIGAAIADTLAAQgatvigtatsasgaaaigERLAAHGGH-GREL  61
            LQG IA++TGA+  RGIG A A T+A +GA V+      S+A   +  L+   GH G   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLAA  103

Query  62   NVTDATAVDGLIDAIGKEFGAISILVNNAGITRDNLLMRMKDDDWQAIIDTNLTSVFRTS  121
            NV+D + V   + +I  +FG I +LVNNAGIT+    + ++ +D + ++D +L + +  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  122  KAVMRGMMKARKGRIINIASVVGVTGNP--GQTNYAAAKAGIIAFSKSLAKEIGSRGVTV  179
            +AV+  M     G I+ ++SV +  G    G  +Y+AAKAG+++++K++A+E+G+  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NVVAPGFIDTDMTKAL-PDEARTALLQQIALGHLGEPEDIANAVAFLAGPTARYITGETL  238
            N +APG+I+TD+T +L  DE R A+++ I+LG+LG ++D+ANA  FLA+  + Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGM  244
            +VNGGM
Sbjct  284  DVNGGM  289

1044) fabG in NC_007508


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 162/246 (66%), Gaps = 8/246 (3%)

Query  5    LQGEIALVTGAS--RGIGAAIADTLAAQgatvigtatsasgaaaigERLAAHGGH-GREL  61
            LQG IA++TGA+  RGIG A A T+A +GA V+      S+A   +  L+   GH G   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLAA  103

Query  62   NVTDATAVDGLIDAIGKEFGAISILVNNAGITRDNLLMRMKDDDWQAIIDTNLTSVFRTS  121
            NV+D + V   + +I  +FG I +LVNNAGIT+    + ++ +D + ++D +L + +  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  122  KAVMRGMMKARKGRIINIASVVGVTGNP--GQTNYAAAKAGIIAFSKSLAKEIGSRGVTV  179
            +AV+  M     G I+ ++SV +  G    G  +Y+AAKAG+++++K++A+E+G+  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NVVAPGFIDTDMTKAL-PDEARTALLQQIALGHLGEPEDIANAVAFLAGPTARYITGETL  238
            N +APG+I+TD+T +L  DE R A+++ I+LG+LG ++D+ANA  FLA+  + Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGM  244
            +VNGGM
Sbjct  284  DVNGGM  289

1045) Sfla_6528 in NC_016110


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  114 bits (417),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 104/258 (41%), Positives = 168/258 (66%), Gaps = 20/258 (7%)

Query  7    FTGQVAFVTGASS--GMGLatarafaasgaavalaDINEDAVNAAAKQLADDGHQALALV  64
            + G++A++TGA+S  G+G ATA +FA  GA V + D++E A   AA  L++ GH  L+L 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GH--LGLA  102

Query  65   CDVTDEHQVAAAVDRTVEAFGRLDMAYNNAGIMPAPTDAADESADQFDRVQNINLRGIWA  124
             +V+DE QV  AV   +E FGR+D+  NNAGI   P  + D  ++++D+V +++LRG   
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGI-TQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  125  AMKHELRHMRTQGSGAIVNCSSL------GGLVGNPGRAAYHASKHGVIGLTKSAALEYG  178
              +  +  MR+QGSG+IV C S       GG+ G P    Y A+K GV+GL K+ A E+G
Sbjct  162  MSQAVIPTMRAQGSGSIV-CMSSVSAQRGGGIFGGP---HYSAAKAGVLGLGKAMAREFG  217

Query  179  SRGVRINAVCPGTISTPMVDAMIEGGELDRSQA-EGGQAIDRLGTADEIAQAVLWLCSDG  237
            +  +RIN++ PG I T + ++++++   +R +A   G +++RLG+A+++A+A L L SD 
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQD---ERRHAIIEGIPLGRLGAAQDVANAALFLASDL  274

Query  238  ASYVTGIALPVDGGYVAQ  255
            +SY+TGI+L V+GG + +
Sbjct  275  SSYLTGITLDVNGGMLIH  292

1046) kduD in NC_011001


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 86/212 (41%), Positives = 141/212 (67%), Gaps = 6/212 (2%)

Query  61   DATSARVAAA--GRRFVDVRADLSTLEPVERIVEGAVDAFGHVDILVNNAGMIRRCDALA  118
            D ++AR AAA  G   +++ A+++    V + V   ++ FG++D+LVNNAG+ +   +L 
Sbjct  83   DESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD  142

Query  119  FTEADWDAVIDVNLKSVFFLSQAVARQMVRQGRGGKIVNVASMLSFQGG--IRVPSYTAS  176
            +  +D D V+DV+L++ +++SQAV   M  QG +G IV ++S+ + +GG  +  P Y+A+
Sbjct  143  IRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQG-SGSIVCMSSVSAQRGGGIFGGPHYSAA  201

Query  177  KSGVLGLTRLLANEWAARGINVNAIAPGYMETDNTAQLREDSRRSDEILGRIPAGRWGVP  236
            K+GVLGL + +A E ++  I +N+IAPG ++TD T+ L +D RR + I+  IP GR G +
Sbjct  202  KAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERR-HAIIEGIPLGRLGAA  260

Query  237  DDLAGAAVFLASRASDYVHGHTLAVDGGWLAR  268
            +D+A AA+FLAS  S Y+ G TL V+GG L +
Sbjct  261  QDVANAALFLASDLSSYLTGITLDVNGGMLIH  292

1047) kduD2 in NC_017933


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 85/212 (41%), Positives = 142/212 (67%), Gaps = 8/212 (3%)

Query  43   PARETAAKVHALGRRFVAIDADLAT-APVQPLVTEAVDALGRIDILVNNAGIIRRDDVLD  101
            +AR++AA   +LG   +++ A++A  + V+  V+  ++ +GRID+LVNNAGI +    LD
Sbjct  86   AARDAAA---TLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD  142

Query  102  FSEKDWDDVMDLNLKALFFLSQAVARQFIAQGSGGKIINVASMLSFQGG--IRVPSYTAS  159
            +   D D V+D++L++ +++SQAV     AQGSG+ I+ ++S+ + +GG  +  P Y+A+
Sbjct  143  IRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGS-IVCMSSVSAQRGGGIFGGPHYSAA  201

Query  160  KSGVLGLTRLLANEWAPYGINVNGIAPGYMATNNTQALREDAERNEEILARIPAGRWGTP  219
            K+GVLGL + +A E +P  I +N+IAPG + T+ T +L +D ER + I+  IP GR G++
Sbjct  202  KAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQD-ERRHAIIEGIPLGRLGAA  260

Query  220  EDLQGPVIFLASKASDYVNGYTLAVDGGWLAR  251
            +D+  + +FLAS  S Y+ G TL V+GG L +
Sbjct  261  QDVANAALFLASDLSSYLTGITLDVNGGMLIH  292

1048) FraEuI1c_4417 in NC_014666


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  113 bits (410),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 170/251 (68%), Gaps = 12/251 (4%)

Query  1    MRLKDKVAVITGAGS--GIGKAIAHRFAAEGANVVCASVSGRAV-EVAAEIGPAAVGVQA  57
            M L++K+A+ITGA+S  GIG+A A  FA +GA VV   +   A  + AA +G + +G+ A
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  58   DVGDEADVRRLMTTARDAFGRIDVLVNNAGFGGKLRPLHEQTTADWDRVHGVNLRGVFFC  117
            +V+DE++V++ ++T  + FGRIDVLVNNAG+   ++ L +   +D D+V +V+LRG ++ 
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTL-DIRPGDYDKVLDVSLRGTLL-  161

Query  118  MKYGIIAMRDAGGGGSIVNISSATAVVG---FKNHGVYGAAKAGVNQLTKAAALDYADDN  174
            M  ++I+   A G+GSIV +SS +A  G   F     Y+AAKAGV  L KA A +++ D+
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPH-YSAAKAGVLGLGKAMAREFGPDQ  220

Query  175  IRVNAVCPGTIWTGLVAMSKVSPEPPPGVYRLPGIPMDRWGLSNEVaaaalflaSDEASY  234
            IR+N++ PG I T++ + + +  E   ++  + GIP++R G +++VA AALFLASD +SY
Sbjct  221  IRINSIAPGLIHTDITG-GLMQDERRHAI--IEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  235  VTGLLMPVDGG  245
            +TG+ + V+GG
Sbjct  278  LTGITLDVNGG  288

1049) Sinac_3785 in NC_019892


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  113 bits (413),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 109/253 (44%), Positives = 168/253 (67%), Gaps = 11/253 (4%)

Query  1    MTLTGKVAIVTgagsrrgigraialglarEGADVAVTEWAGEGVADEIRALGRRSLaaai  60
            M L GK+AI+TGA+S RGIGRA A+ +A++GA V + +    +  D   +LG   L+ A 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  61   dvadapavRQFVAAVAREFGHIDILVNNAGFCEFVPFLDLTEDLWDRTLAVNLKGFFLFG  120
            +VAD + V+Q VA++  +FG+ID+LVNNAG+ + +  LD+  +  D+ L V+L+G +L +
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  121  QCVARQMVLQGRGGKILNISSQAAEAAGE--EKVHYCVSKAGVKMLTQGMALELARHRIQ  178
            Q V   M  QG +G I+ +SS +A+ +G      HY  +KAGV  L ++MA E++ ++I+
Sbjct  164  QAVIPTMRAQG-SGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  179  VNAIAPGTIDTEIVRQPNIQALVERERQHS---TIPLGRMGTAADLVGAALFLCSPASDY  235
            +N+IAPG I+T+I       +L++ ER+H+    IPLGR+G+A D+  AALFL S  S Y
Sbjct  223  INSIAPGLIHTDIT-----GGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  236  VTGAALLVDGGML  248
            +TG +L V+GGML
Sbjct  278  LTGITLDVNGGML  290

1050) Osc7112_6622 in NC_019730


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  113 bits (413),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 105/259 (41%), Positives = 179/259 (70%), Gaps = 18/259 (6%)

Query  1    MMLKDKVALVTGGTS--GIGRATaiayaqqqakvvvvGRRIDEGEKTVRLIQDAGGDAIF  58
            M+L++K+A++TG++S  GIGRATA+++AQ+ A+VV+    +D +E + R    + G++ +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHL  99

Query  59   -VQADVTKEADVKAMVDKAVGVFGRLDIAFNNAGTLGENPSLIEQTEAEYDRIMNVNVKG  117
             + A+V+ E++VK  V   +  FGR+D+  NNAG + +    ++   ++YD++++V+++G
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAG-ITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  118  VWLSMKHEIAQMLKQGSGSIV--NTASANGVVALPGVPLYTASKHAVIGLTKAAALQYAK  175
              L  +  I+ M  QGSGSIV  ++ SA+   ++ G P Y+A+K +V+GL KA A +++ 
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  176  AGIRINVVAPAVIETDMFEAATGG--QDEAK-AYITGLHPLGRIGTPLEVANAVLFLSSD  232
              IRIN +AP++I+TD+    TGG  QDE + A I G+ PLGR+G++ +VANA LFL+SD
Sbjct  219  DQIRINSIAPGLIHTDI----TGGLMQDERRHAIIEGI-PLGRLGAAQDVANAALFLASD  273

Query  233  LASFVTGETLMVDGGFVAQ  251
            L+S++TG TL V+GG + +
Sbjct  274  LSSYLTGITLDVNGGMLIH  292

1051) BRPE64_ACDS19780 in NC_021287


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 176/251 (71%), Gaps = 12/251 (4%)

Query  1    MNLENQVAIVTGAS--RGIGRAIALELAKQGATVIGTATSESGAAGITEALQAVSGKSR-  57
            M L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     ES+A + + +L    G ++ 
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL----GEGHL  99

Query  58   GavlnvndaaaadaFIEATVKEFGGLNVLVNNAGITKDQLAMRMKDDEFDAVIDTNLRAV  117
            G   NV D +     + + + +FG ++VLVNNAGIT+   ++ ++ +++D V+D +LR+ 
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  118  FRLSRAVLRPMMKARG-GRIINITSVVGSSGNPg--qanyaaakagvagmtraLAREIGS  174
            + +S+AV+ P M+A+G G I+ ++SV +  G      ++Y+AAKAGV G+ +A+ARE+G+
Sbjct  160  LLMSQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  175  RGITVNCIAPGFIDTDMTK-VLPEEQRTALTAQIPLGRLGAPEDIAHAVAFLASPFAGYI  233
              I +N IAPG+I+TD+T  ++ +E+R A+   IPLGRLGA++D+A+A  FLAS +++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  234  TGTTLHVNGGM  244
            TG TL+VNGGM
Sbjct  279  TGITLDVNGGM  289

1052) Sinac_1365 in NC_019892


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 107/251 (43%), Positives = 172/251 (69%), Gaps = 16/251 (6%)

Query  14   LSGQVALVTGAS--RGIGRAIATRLAACGASVAGVARTVEGLEETLKTIRDAGGT-AEGY  70
            L G++A++TGA+  RGIGRA A  +A  GA V      + +L+E+  + RDA++T +EG 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARV-----VILDLDES--AARDAAATLGEGH  98

Query  71   ---AANVADSADVNRVVEEVEAKFGKIHVLVNNAGITRDGLVLRMEDDAWDDVIDTNLKG  127
               AANVAD ++V++ V  +   FG+I+VLVNNAGIT+    L +  +  D V+D +L+G
Sbjct  99   LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRG  158

Query  128  TFLFSRAVGAIMMRGRYGRIINISSVSGLMGNP--GQANYSASKAGVIGFSRTIARELAP  185
            T+L S+AV + M     G I+ +SSVS+  G    G ++YSA+KAGV+G+++++ARE++P
Sbjct  159  TLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  186  RNITVNVIAPGFITTDMTDAL-PDKIKSEVKDRVPLRRLGTPDDIadlacylagagagyl  244
             +I +N IAPG+I TD+T++L  D  +  + + +PL RLG+++D+A+ A +LA+  ++YL
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  245  TGQVIAVDGGM  255
            TG  + V+GGM
Sbjct  279  TGITLDVNGGM  289

1053) fabG in NC_009482


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 105/256 (42%), Positives = 174/256 (68%), Gaps = 13/256 (5%)

Query  2    SSLAPLAGQIALVTGAS--RGIGRAIALQLAEAGAEVVVNYASSADAAEQVVSAITAAGG  59
            ++L  L G+IA++TGA+  RGIGRA A+ +A+ GA VV+     + A +    A ++ G 
Sbjct  41   TPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARD----AAATLGE  96

Query  60   SAYALKADVSQEDQVEQLMAAVLEKSGRIDVLINNAGITRDGLLMRMKTPDWQAVLDLNL  119
            +  +L A+V++E QV Q +A+++E  GRIDVL+NNAGIT+    + ++  D + VLD++L
Sbjct  97   GHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSL  156

Query  120  SGVFLCTRAVTRTMLKQKQGRIINITSVVGLMgnag--qanyaaakagVIGFTKSTAREL  177
             G +L ++AV  TM  Q  G I+ ++SV +  G +    ++Y+AAKAGV+G+ K+ ARE+
Sbjct  157  RGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  178  ASRGITVNAVAPGFIATDMTKDLAAE----ALLNAIPLGRYGEVDEVAGAVRFLAADPAA  233
            ++  I +N++APG+I TD+T +L  +    A++++IPLGR G  ++VA A  FLA+D  +
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASD-LS  275

Query  234  AYITGQVLQVDGGMVM  249
            +Y+TG  L+V+GGM++
Sbjct  276  SYLTGITLDVNGGMLI  291

1054) Saro_3420 in NC_009427


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 102/251 (41%), Positives = 162/251 (65%), Gaps = 14/251 (5%)

Query  7    LSGKAAIVTGST--RGIGRAIAEALVAAGARVVISSEDAADTARVAAELGMP--GCACDV  62
            L GK AI+TG++  RGIGRA A ++   GARVVI   D + +   AA LG    G A +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  63   ADDLQLAALVEFSLASLGRLDVLVCNAGITGKAGPFAEIDMDDYARVMAINLRSQVVMCN  122
            AD+ Q+   V   +  +GR+DVLV NAGIT     + +I  +DY +V+ ++LR+ ++M +
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTL-DIRPGDYDKVLDVSLRGTLLMSQ  164

Query  123  lalphiaaggggaailvaslsalRGNGRINA--YALAKAGVAQLARNLAVEWGPRAVRVN  180
              +P + A G+G+ + ++S+SA RG G + +  Y+ AKAGV  L++ +A E GP  +R+N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  181  AVSPGFIATELSGPLLADEGFMARRMSM---TPLRRPGTPAEVAGAAVFLASPAGGFVTG  237
            +++PG+I T+++G L+ DE    RR ++    PL R G++ +VA AA+FLAS  ++++TG
Sbjct  225  SIAPGLIHTDITGGLMQDE----RRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  238  HNLVVDGGTLV  248
              L V+GG L+
Sbjct  281  ITLDVNGGMLI  291

1055) Tgr7_1835 in NC_011901


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 102/249 (41%), Positives = 169/249 (68%), Gaps = 8/249 (3%)

Query  1    MSLENEIALVTGSS--RGIGKAIAMALAEQGATVVGTATSESGAEAITAYLREAGLKGRG  58
            M L+  IA++TG++  RGIG+A A+++A++GA VV     ES+A   +A L E+ L   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MALNVTDAEAVEAAIKQISDDLGGISILVNNAGITRDNLMMRMKDEEWDDIIQTNLTAVW  118
            +A NV+D   V  A+  I +++G I +LVNNAGIT+    + ++  + D +++ +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RVTRGVLRGMMKARKGRIINvgsvvgssgNA--GQTNYaaakagllglgkslaREVGSRG  176
             ++++V+  M     G I+ ++SV +  G +  G  +Y+AAKAG+LGLGK++ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNTVAPGFIDTDMTRGL-PEAQRDALLGQIPLGRLGRPEEIASVVAFLASPAAAYITG  235
            I +N++APG+I+TD+T GL  + +R+A++  IPLGRLG ++++A+   FLAS  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ETLHVNGGM  244
             TL+VNGGM
Sbjct  281  ITLDVNGGM  289

1056) fabG2 in NC_012587


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 90/218 (42%), Positives = 149/218 (69%), Gaps = 2/218 (0%)

Query  28   EGAQVVVCDRDEEAAKLTAEEIGSAALAVRADISVDEDVSGLVDQALARFGKIDILVNNA  87
            +GA+VV+ D DE AA+ +A  +G + L++ A+++ + +V   V   + +FG+ID+LVNNA
Sbjct  73   HGARVVILDLDESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNA  132

Query  88   GIGATTlflessreefervvRINLTGTFLVSQAVARTMAEHKSGSIVNIASLSGQKGGV-  146
            GI      L+    ++++V+ ++L GT+L+SQAV  TM  + SGSIV ++S+S+Q+GG  
Sbjct  133  GITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGI  192

Query  147  -GRSAYGASKAGVELLNKVMAVELADHGINVNAIAPGPILTEVSRTMHTIETREAYHRLV  205
             G + Y+A+KAGV  L K MA E++ + I +N+IAPG I T+++  +   E R+A    +
Sbjct  193  FGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGI  252

Query  206  PQRRYGEPEEIADAAVFLASEEARYITGHTLNVDGGFL  243
            P  R G ++++A+AA+FLAS+ + Y+TG TL+V+GG L
Sbjct  253  PLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGML  290

1057) Bcenmc03_6823 in NC_010512


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 105/261 (41%), Positives = 163/261 (63%), Gaps = 16/261 (6%)

Query  6    ASLFSLDQKVAVVTGAGS--GIGRETalllasagaavvaadlNEEAAQETVKQIELSSGK  63
            ++L  L+ K+A++TGA+S  GIGR TA+ +A  GA VV  DL+E AA+++     L+ G 
Sbjct  41   TPLMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA--ATLGEGH  98

Query  64   AIAVKVDIGNESSILAMYETVQAKLGRLDVLVNNAGIYPKTHFVETSAEKWDKVLGVNLR  123
             +++  ++++ES +     T+   +GR+DVLVNNAGI      ++  +   DKVL+V+LR
Sbjct  99   -LGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLR  157

Query  124  GTFLCMREAIKRMQATGNGGSIVNISSVASQQ-PVIFDNGDYGASKAGVNNLTKVAALEF  182
            GT+L  +  I  M+A G+ GSIV +SSV++Q+   IF+  +Y+A+KAGV  L K  A EF
Sbjct  158  GTLLMSQAVIPTMRAQGS-GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREF  216

Query  183  AGDRIRVNAVLPGGVATE---GAAESTKAHQATGPITQPGRMPLGRIGLPSDIARAVLFF  239
            + D+IR+N++ PG + T+   G  +  + H     I      PLGR+G + D+A A LF+
Sbjct  217  GPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGI------PLGRLGAAQDVANAALFL  270

Query  240  ASPASDYVTGQLLAVDGGFQV  260
            AS  S Y+TG  L V+GG  +
Sbjct  271  ASDLSSYLTGITLDVNGGMLI  291

1058) Bfae_04660 in NC_013172


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  111 bits (403),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 101/246 (42%), Positives = 164/246 (67%), Gaps = 6/246 (2%)

Query  17   LTGRICVVTGAAS--GIGRGIATrlaaegavvvvadldeeaaravaeQLGRPALAVGVDV  74
            L G+I ++TGAAS  GIGR+ A  +A +GA VV+ DLDE AAR  A  LG   L+++ +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  75   SDRERVDAMTAQVMDRFGRIDVLVNNAGWDTVGPFLEQDHEVWDRIIGINLCGTLHCSQS  134
            +D  +V    A ++++FGRIDVLVNNAG       L+      D++++++L GTL  SQ+
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  135  VVRVMVQQGHGTVVNIASDAARVGSS--GEAVYSACKGGVVAFTKTLARETARHGITANA  192
            V+  M  QG G++V ++S +A+ G++  G + YSA K+GV+++ K++ARE + + I  N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  193  VCPGPADTPLFASLSEENPKLRASLERAIPLRRLAQPEDLAHAVAFLASPASRYITGQTL  252
            + PG  +T + ++L +++   R ++  +IPL RL+ ++D+A+A  FLAS  S Y+TG TL
Sbjct  226  IAPGLIHTDITGGLMQDER--RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  253  SVSGGL  258
             V+GG+
Sbjct  284  DVNGGM  289

1059) LVISKB_0165 in NC_020819


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  110 bits (400),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 159/248 (65%), Gaps = 14/248 (5%)

Query  4    LDGKVAIVTGGV--KGIGLATAKAFVQEGAKVVITDVDERNSAAALAEIGQDNAIFVKQN  61
            L+GK+AI+TG+   +GIG ATA +F Q+GA+VVI D+DE  +  A A +G+++ + +  N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGH-LGLAAN  104

Query  62   VADEAQWEPVFEAAEKAFGPVNVLMNNAGILSFNNAEEVTEDSWHKVLAVDLDGVMYGVK  121
            VADE+Q      +    FG ++VL+NNAGI    ++ ++  +  +KVL V L G +   +
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  HAIAHMKDNG-GSIINLSSIAGLIGISNLFA---YNAAKGGVRMLNKSAAL-YCAEQHYP  176
              I+ M+ +G GSI+ +SS+++  G + +F+   Y+AAK+GV  L K+ A  + ++Q   
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRG-GGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ---  220

Query  177  IRVNSIHPGYIHTPMVDAY--PEMRQQLEALHPVGRLGEASEVANMAVYLASDESSFSTG  234
            IR+NSI PG IHT + ++    E R+ +    P+GRLG A +VAN A++LASD SS+ TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  235  AEFVVDGG  242
              + V+GG
Sbjct  281  ITLDVNGG  288

1060) N646_3826 in NC_022359


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  110 bits (399),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 164/246 (67%), Gaps = 14/246 (5%)

Query  5    KVAVVTGAA--RGIGQAICEQLLEDGFHVIGLDIS-PVEWSQSAQLSSYQVNLC----Da  57
            K+A++TGAA  RGIG+A    + ++G +V+ LD+  +  +  +A L+  ++ L     D 
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  58   eavsevvesvveQHGRIDALVNNAGITRDALLPDMLEQDWDSVIDVNLKAVFLLTQRVAP  117
              V + V +++E+ GRID LVNNAGIT+     D+   D D V+DV+L++ +L++Q V P
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  118  VMLEQgtgsiv--sissivgtDGNIGQSNYGASKGGVISMSKGWAKELSRKGAQIRVNCV  175
             M  QG+GSIV  S  S    +G +G ++Y+A+K+GV++++K+ A+E++    QIR+N +
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD--QIRINSI  226

Query  176  APGFIATDMTKNL--PEKVIQMMEGKTPLGRMGSVQDIANGVSFLTSDKSAYITGQVLKI  233
            APG+I TD+T  L   E+   ++EG  PLGR+G+ QD+AN+  FL+SD S+Y+TG  L +
Sbjct  227  APGLIHTDITGGLMQDERRHAIIEG-IPLGRLGAAQDVANAALFLASDLSSYLTGITLDV  285

Query  234  DGGLVL  239
            +GG+++
Sbjct  286  NGGMLI  291

1061) bgla_1g10410 in NC_015381


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 107/251 (43%), Positives = 180/251 (72%), Gaps = 16/251 (6%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARQGATVIGTATSEagaqgigaalaeaglagrgaV  62
            L+ ++AI+TGA+  RGIGRA A+ +A++GA V+     E++A++ +A+L+E+ L+  +  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA--  103

Query  63   LDVNDAASAEALIDSTVKEFGRLDILVNNAGITQDQLAMRMKDDDWDAVIDTNLKSVFRL  122
             +V D +     + + + +FGR+D+LVNNAGITQ   ++ ++ +D D V+D +L++ + +
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRGVLRPMMKARG-GRIINITSVV-----GSLGNPgqanyaaakagvagltraLAREIGS  176
            S++V+ P M+A+G G I+ ++SV      G +G P   +Y+AAKAGV GL +A+ARE+G+
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGP---HYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGITVNCVAPGFIDTDMTKSL-PEEQQAALKTQIPLGRLGSTDDIAHAVAFLASPLAGYI  235
              I +N +APG+I+TD+T +L  +E++ A+   IPLGRLG+++D+A+A  FLAS L++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGTTLHVNGGM  246
            TG TL+VNGGM
Sbjct  279  TGITLDVNGGM  289

1062) Achl_1767 in NC_011886


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 156/247 (64%), Gaps = 12/247 (4%)

Query  4    FDGRVAIITGGAS--GIGRATAVRFAGEGGSVVVADIQDELaaqvaaeigaaggHARAFH  61
            ++G++AIITG+AS  GIGRATAV FA +G+ VV+ D+++   A   A    + GH  ++ 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDES--AARDAAATLGEGHL-GLA  102

Query  62   LDVTSESGWAGVVAFALEEFGRLDVLVNNAGIGDNQSIEDTSVETYTKVVAVTQTSVFLG  121
             +V+ ES     VA  +E+FGR+DVLVNNAGI +     D     Y KV+ V+  + +L 
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  122  EkaaaaalkaSGNGAVVNVSSMFGIVGG--FGTSPAYAAAKGAVRTLTKNTALGWATQGI  179
             +A  ++++A G+G++V +SS+ +  GG  FG +P Y+AAK++V  L K  A   + + I
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFG-GPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  RVNSVHPGFIDTPI----LGDTDRKLLTDTTPMARLGRPEDVAAVILFAASDDAAFMTGS  235
            R+NS+ PG+I+T I    + D  R  + +  P++RLG ++DVA   LF ASD ++++TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  236  ELVVDGG  242
             L V+GG
Sbjct  282  TLDVNGG  288

1063) A606_01865 in NC_021663


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 168/247 (69%), Gaps = 7/247 (2%)

Query  7    LSGQTCIVTGAA--QGIGKAIATTLAARGanvvvadlngdaaaataaeiggnSLGVTVDV  64
            L G+  I+TGAA  +GIG+A A T+A +GA VV+ DL+  AA  +AA +G   LG++ +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  65   TDRAQVDAMVATTVETYGRIDVLVNNAGWDKVSPFLDLDPAVWKRIIDINLVGTLNCAHA  124
            +D +QV   VAT +E +GRIDVLVNNAG  +    LD+ P+   +++D++L GTL  ++A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VALQMKEQDGHSTIINIGSDAARVGSS--GEAVYSACKGGVVAFTKTLARELARYGVTAN  182
            V   M+ Q G ++I+ ++S +A+ G++  G + YSA K+GV+++ K++ARE++   +  N
Sbjct  166  VIPTMRAQ-GSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  183  AVCPGPADTPLFAQISEENPKLRTALEKSIPLRRLAQPEDLANAVAFFASPDTSYVTGQT  242
            ++ PG  +T + + + +++   R A+  +IPL RL+ ++D+ANA  F+AS  +SY+TG T
Sbjct  225  SIAPGLIHTDITGGLMQDER--RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  243  FSVSGGL  249
            + V+GG+
Sbjct  283  LDVNGGM  289

1064) fabG in NC_003919


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 162/246 (66%), Gaps = 8/246 (3%)

Query  5    LQGEIALVTGAS--RGIGAAIADTLAAHgatvigtatsasgaaaigERLAAHGGH-GREL  61
            LQG IA++TGA+  RGIG A A T+A HGA V+      S+A   +  L+   GH G   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLAA  103

Query  62   NVTdaaavdgvidaigKEFGAISILVNNAGITRDNLLMRMKDDDWQAIIDTNLTSVFRTS  121
            NV+D + V   + +I  +FG I +LVNNAGIT+    + ++ +D + ++D +L + +  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  122  KAVMRGMIKARKGRIINIASVVGVTGNP--GQTNYAAAKAGIIAFSKSLAKEIGSRGVTV  179
            +AV+  M     G I+ ++SV +  G    G  +Y+AAKAG+++++K++A+E+G+  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NVVAPGFIDTDMTKAL-PDEARTALLQQIALGHLGEPEDIANAVAFLAGPTARYITGETL  238
            N +APG+I+TD+T +L  DE R A+++ I+LG+LG ++D+ANA  FLA+  + Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGM  244
            +VNGGM
Sbjct  284  DVNGGM  289

1065) fabG in NC_020800


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 162/246 (66%), Gaps = 8/246 (3%)

Query  5    LQGEIALVTGAS--RGIGAAIADTLAAHgatvigtatsasgaaaigERLAAHGGH-GREL  61
            LQG IA++TGA+  RGIG A A T+A HGA V+      S+A   +  L+   GH G   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLAA  103

Query  62   NVTdaaavdgvidaigKEFGAISILVNNAGITRDNLLMRMKDDDWQAIIDTNLTSVFRTS  121
            NV+D + V   + +I  +FG I +LVNNAGIT+    + ++ +D + ++D +L + +  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  122  KAVMRGMIKARKGRIINIASVVGVTGNP--GQTNYAAAKAGIIAFSKSLAKEIGSRGVTV  179
            +AV+  M     G I+ ++SV +  G    G  +Y+AAKAG+++++K++A+E+G+  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NVVAPGFIDTDMTKAL-PDEARTALLQQIALGHLGEPEDIANAVAFLAGPTARYITGETL  238
            N +APG+I+TD+T +L  DE R A+++ I+LG+LG ++D+ANA  FLA+  + Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGM  244
            +VNGGM
Sbjct  284  DVNGGM  289

1066) BCO26_1813 in NC_015634


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  109 bits (398),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 103/253 (41%), Positives = 159/253 (63%), Gaps = 18/253 (7%)

Query  1    MKLKNKVAVITGGAS--GIGEATAWLFANEGAKVVIGDVAESKMEIADKIKETGGEALFV  58
            M L+ K+A+ITG+AS  GIG ATA  FA++GA+VVI D+ ES     D     G   L +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDES--AARDAAATLGEGHLGL  101

Query  59   HCDVSDKYSVKHLMEKATDTYGKLDILVACAGIPEKHGPVHELD---QDYWQKVLDINLT  115
              +V+D   VK+ +    + +G++D+LV  AGI +   P+  LD    DY +KVLD++L 
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQ---PIKTLDIRPGDY-DKVLDVSLR  157

Query  116  GVMLSNKYAIPYMLKNGKGAIVNMGSFMAH--VGITNsaaysaakaaVVNLTRAEAVTYA  173
            G +L ++  IP M  +G G+IV M+S  A+   GI  ++ YSAAKA+V+ L +A A  ++
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  174  KQGIRVNSVSPG---TTESPALKYFTKEQIQETIDHNPMGRLGKPEEVAKAVLFLVSDDA  230
             + IR+NS++PG   T  + +L     E+ +  I+  P+GRLG +++VA+A LFL SD +
Sbjct  218  PDQIRINSIAPGLIHTDITGGL--MQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLS  275

Query  231  SFITGTDLHVDGG  243
            S++TG  L+V+GG
Sbjct  276  SYLTGITLDVNGG  288

1067) fabG in NC_020815


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  109 bits (398),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 162/246 (66%), Gaps = 8/246 (3%)

Query  5    LQGEIALVTGAS--RGIGAAIADTLAAHgatvigtatsasgaaaigERLAAHGGH-GREL  61
            LQG IA++TGA+  RGIG A A T+A HGA V+      S+A   +  L+   GH G   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLAA  103

Query  62   NVTdaaavdgvidaigKEFGAISILVNNAGITRDNLLMRMKDDDWQAIIDTNLTSVFRTS  121
            NV+D + V   + +I  +FG I +LVNNAGIT+    + ++ +D + ++D +L + +  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  122  KAVMRGMMKARKGRIINIASVVGVTGNP--GQTNYAAAKAGIIAFSKSLAKEIGSRGVTV  179
            +AV+  M     G I+ ++SV +  G    G  +Y+AAKAG+++++K++A+E+G+  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NVVAPGFIDTDMTKAL-PDEARTALLQQIALGHLGEPEDIANAVAFLAGPTARYITGETL  238
            N +APG+I+TD+T +L  DE R A+++ I+LG+LG ++D+ANA  FLA+  + Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGM  244
            +VNGGM
Sbjct  284  DVNGGM  289

1068) YM304_35170 in NC_020520


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 103/257 (41%), Positives = 165/257 (65%), Gaps = 23/257 (8%)

Query  9    MTGRVAVVTGGS--RGLGREMVLAFAEQGADVVIASRKIENCESVAREVEA-LGRQALPI  65
            + G++A++TG++  RG+GR   ++FA++GA VVI    ++  ES AR+  A LG   L +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVI----LDLDESAARDAAATLGEGHLGL  101

Query  66   AYHAGDWDDSDRLAEATYERFGRCDVLVNNAGMSPLYPSVDAISEALYDKVLGVNLKGPF  125
            A + +D  +  +   +  E+FGR DVLVNNAG++    ++D I  + YDKVL+V+L+G +
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLD-IRPGDYDKVLDVSLRGTL  160

Query  126  RLSAVIGTRMQAAVQAGTQgsgsiifvssissQRPS-----PQEVVYGAAKAGVNNLTYG  180
             +S  +   M+A      QGSGSI+ +SS+S+QR +     P+   Y+AAKAGV  L  +
Sbjct  161  LMSQAVIPTMRA------QGSGSIVCMSSVSAQRGGGIFGGPH---YSAAKAGVLGLGKA  211

Query  181  LSRTLGPE-VRVNCIVPGPFLTDISKAWNLDEFNESARKTLALGRGGEPDEIIGAALYLA  239
            ++R +GP+ +R+N I PG + TDI+ +   DE  ++    ++LGR G ++++  AAL+LA
Sbjct  212  MAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLA  271

Query  240  TDASSYTTGTLIDVNGG  256
            +D SSY TG  +DVNGG
Sbjct  272  SDLSSYLTGITLDVNGG  288

1069) fabG in NC_010322


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGIAGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E   +  G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE---GHLG  100

Query  59   MELNVTSAESVEAVLGAIAEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +++I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1070) fabG in NC_021505


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLGAIAEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +++I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1071) fabG in NC_021491


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  107 bits (390),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVETVLGAIAEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +++I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1072) fabG in NC_018220


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  107 bits (388),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLAAIGEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +A+I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1073) fabG in NC_019905


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  107 bits (388),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLAAIGEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +A+I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1074) fabG in NC_002947


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  107 bits (388),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLAAIGEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +A+I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1075) PPS_1547 in NC_015733


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  107 bits (388),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLAAIGEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +A+I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1076) Despr_2011 in NC_014972


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 102/252 (41%), Positives = 164/252 (66%), Gaps = 9/252 (3%)

Query  1    MILEKMIALVTGGS--RGIGRAICLKLAAMGATVGINYVANPAAAEETLRQVEAVGGKGF  58
            M+L+  IA++TG++  RGIGRA  + +A  GA V I  + ++AA + +     ++G   +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAA----ATLGEGHL  99

Query  59   TVRFDVADAQAVQEQIKEIIATHGQIDILVNNAGITRDGLMARMKEDDWDSVLDTNLKGA  118
             +  +VAD   V++ +  II   G+ID+LVNNAGIT+      ++ +D D VLD +L+G+
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCSKAVMRAMMKKRWGRII--nvssvvgfvgnsgqvnYgaakaglaglTKSMARELAGR  176
            +L S+AV+ +M  +  G I+  +  S     G  G  +Y+AAKAG+ GL K+MARE++  
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NITVNCVAPGYIVTDMTDGL-TEDVQEALKAQIPMGTLGTPEDVAASVGFLASPDSNYIT  235
            +I +N +APG I TD+T+GL  ++ ++A+   IP+G LG+++DVA +  FLAS  S+Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQTLHVNGGMYM  247
            G TL+VNGGM +
Sbjct  280  GITLDVNGGMLI  291

1077) fabG in NC_016048


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 170/250 (68%), Gaps = 9/250 (3%)

Query  1    MNFSGKTAVVTGGS--RGLGRAICRKLAAGGANVVFSYAGNTAAAQETVKELEDMGAEVR  58
            M + GK A++TG++  RG+GRA    +A  GA VV+   +++AA + +      +G    
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT----LGEGHL  99

Query  59   AVQGDVADSEAVRTLMDTAVKEFGHIHILVNNAGITRDGLAMMMKEEDFDAVIDTNLKGT  118
            ++ ++VAD   V+  + T + +FG+I++LVNNAGIT+   ++ ++  D+D V+D +L+GT
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FLCMKAVSRIMLRQKYGRIVNLSSVVGLHGNA--GQVNYAASKAGVIGMTKSLAKELAAK  176
            +L  +AV   M  Q  G IV +SSV + +G +  G  +Y+A+KAGV+G+ K++A+E+++ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  GITVNAVAPGFITTDMTSAL-PEAARTALLATIPMarlgaaedvaaavaflagdasaYIT  235
             I +N++APG+I TD+T++L  +  R A++  IP++RLGAA+DVA A  FLA+D S+Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQVLGVDGGM  245
            G  L+V+GGM
Sbjct  280  GITLDVNGGM  289

1078) fabG in NC_010501


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  106 bits (387),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLGAIGEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +++I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQAEEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1079) TASI_0538 in NC_016043


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  106 bits (387),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 166/247 (68%), Gaps = 7/247 (2%)

Query  5    LKDKIALVTGAS--RGIGEAIALELASRGARVIGTATSESGAKQITEKLSEFGGEGKVLN  62
            L++KIA++TGA+  RGIG A A+ +A +GARV+     ES+A++ +  L+E G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  63   VTDAAASEELVKEIVE-MGGPHILVNNAGITRDNLIMRMKDEEWDDIVQTNLTAVFRLSR  121
            V+D +   + V  I+E  G  ++LVNNAGIT+    + ++  + D +++ +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVVRPMMKARDGRIINITSVVGMTGN--IgqanyaaakagvagMTRSLARELGSRNITVN  179
            AV+  M     G I+ ++SV +  G   +G ++Y+AAKAGV G+ +++ARE+G+ +I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  CVAPGFIDTAMTRAL-GDEAAQKLISQIPLGRLGSVKDIAYAVAFLASPYAGYITGETIN  238
             +APG+I+T +T +L  DE  + +I  IPLGRLG+ +D+A A  FLAS  ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGMFI  245
            VNGGM+I
Sbjct  285  VNGGMLI  291

1080) YSA_01907 in NC_017986


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  106 bits (386),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLGAIGEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +++I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1081) fabG_2 in NC_017530


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  106 bits (386),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLAAIGQQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +A+I ++FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1082) fabG in NC_009512


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  106 bits (386),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 164/249 (66%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGATVIGTATSASGAERIAATLKEHGITGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E  +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   MELNVTSAESVEAVLGAIGEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +++I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARWGRIISIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVTPGFIDTDMTREL-PEAQREALQTQIPLGRLGQADEIAKVVSFLASDGAAYVTG  235
            I +NS++PG+I+TD+T  L  + +R+A+   IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATVPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1083) Varpa_1532 in NC_014931


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  106 bits (385),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 172/246 (70%), Gaps = 8/246 (3%)

Query  15   FEGQVALVTGAS--RGIGAAIALELAQRGLKVVGTGTTEDSAAKITSALSAFDGR-GRAL  71
            ++G++A++TGA+  RGIG A A+ +AQ+G +VV  +  E +A   +++L+  +G+ G A 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG--EGHLGLAA  103

Query  72   NVNDAAAVEALIDEIVQAYGSIHVLVNNAGITRDTLAMRMKDDDWDAVLDTNLKAVFRLS  131
            NV D + V   +  I++ +G I+VLVNNAGIT+   ++ ++ +D D VLD +L++ + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  132  RAVIRPMMKQRYGRIISITSVVgasgnagqany--aaakagvagmtraLARELGSRNITV  189
            +AVI  M  Q  G I+ ++SV +  G +  +    +AAKAGV G+ +A+ARE+G+ +I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  190  NCVAPGFIETDMTASL-PEaqqqallqqIPLGHLGKPADIAHAVAYLASPQASYVTGQEL  248
            N +APG+I+TD+T++L  + +++A+++ IPLG+LG + D+A+A  +LAS  +SY+TG  L
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  249  HVNGGM  254
            +VNGGM
Sbjct  284  DVNGGM  289

1084) Aave_2790 in NC_008752


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 164/247 (67%), Gaps = 13/247 (5%)

Query  21   RICIVTGGA--QGIGEACARRFARESarvvvadvddarGSALAAELPQA-LYVHCDVGDK  77
            +I I+TG+A  +GIG A A  FA+++ARVV+ D+D++ +   AA L ++ L +  +V+D 
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  78   AQVDALVARVLEAHGRIDVLVNNAGIFRSADFLEVSEEDFDAVLRVNLKGSFLVGQavar  137
            +QV   VA ++E  GRIDVLVNNAGI ++   L++   D+D VL V+L+G++L++QAV  
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  138  amvaagrgaIVNMSSVN-----GVLAIPTIASYNVSKGGINQLTRVMALALASRGVRVNA  192
            +M A G G+IV MSSV+     G+++ P    Y+ +K+G+  L + MA  +++  +R+N+
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGP---HYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  193  VAPGTIATELATQAVLTSDDARARIMSRTPMGRLGEPAEIADVVAWLASDAASYVTGEIV  252
            +APG I T+++  + L  D+ R  I+   P+GRLG + ++A+    LASD +SY+TG  +
Sbjct  226  IAPGLIHTDIT--GGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  253  TVDGGRM  259
             V+GG +
Sbjct  284  DVNGGML  290

1085) bglu_1g09530 in NC_012724


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 176/251 (71%), Gaps = 16/251 (6%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARSGATVIGTATSEagaqaisaafaeagaagrgaV  62
            L+ ++AI+TGA+  RGIGRA A+ +A+ GA V+     E++A+  +A+++E+  +  +  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA--  103

Query  63   LDVNDAAAGEALIEATVKEFGRLDVLVNNAGITQDQLAMRMKDDDWDAVIDTNLKSVFRL  122
             +V D +     + + + +FGR+DVLVNNAGITQ   ++ ++ +D D V+D +L++ + +
Sbjct  104  -NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVV-----GSLGNPgqanyaaakagvagltraLAREIGS  176
            S+AV+ P M+A+G G I+ ++SV      G +G P   +Y+AAKAGV GL +A+ARE+G+
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGP---HYSAAKAGVLGLGKAMAREFGP  218

Query  177  RGITVNCVAPGFIDTDMTKAL-PEEQQAALKSQIPLGRLGSTDDIAHAVAFLASPQAGYI  235
              I +N +APG+I+TD+T +L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+
Sbjct  219  DQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGTTLHVNGGM  246
            TG TL+VNGGM
Sbjct  279  TGITLDVNGGM  289

1086) fabG in NC_020516


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 168/247 (69%), Gaps = 8/247 (3%)

Query  5    LEGQVALVTGAS--RGIGRAIALELGKLGATVVGTATSEGGAADIEKGLQEAGIKGGGLA  62
            L+G++A++TGA+  RGIGRA A+ +++ GA VV     E++A D    L E+ +   GLA
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LNvtdaaacealvaeveKRFGAVGILVNNAGITRDNLAMRMKDEEWDSVLDTNLKAVFRM  122
             NV+D +     VA +  +FG +++LVNNAGIT+   ++ ++  + D VLD +L++ + M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRLVMRGMMKARGGRIINVTSVVGSAGNPg--qanyaaakagvagmsraLARELGSRNIT  180
            S+ V+  M    +G I+ ++SV +  G      ++Y+AAKAGV G+++A+ARE+G+ +I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  181  VNCVAPGFIDTDMTRAL-PESARDALLGNIALGRLGRPEEVAGAVAFLASPAAAYVTGTT  239
            +N +APG+I+TD+T +L  +  R+A++  I+LGRLG +++VA A  FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  240  LHVNGGM  246
            L+VNGGM
Sbjct  283  LDVNGGM  289

1087) Acav_2471 in NC_015138


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (383),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 164/247 (67%), Gaps = 13/247 (5%)

Query  16   RVCIVTGGA--QGIGEACARRFAREGarvvvadvddarGSALAAELPQA-LYVRCDVGDK  72
            ++ I+TG+A  +GIG A A  FA++GARVV+ D+D++ +   AA L ++ L +  +V+D 
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  73   AQVDALVARVLEAHGRIDVLVNNAGIFRAADFLDVSEEDFDAVLRVNLKGSFLVGQavar  132
            +QV   VA ++E  GRIDVLVNNAGI ++   LD+   D+D VL V+L+G++L++QAV  
Sbjct  109  SQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIP  168

Query  133  amaaagrgaIVNMSSVN-----GVLAIPTIASYNVSKGGINQLTRVMALALAARGVRVNA  187
            +M A G G+IV MSSV+     G+++ P    Y+ +K+G+  L + MA  +++  +R+N+
Sbjct  169  TMRAQGSGSIVCMSSVSAQRGGGIFGGP---HYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  188  VAPGTIATELAAQAVLTSDDARARIMSRTPMGRLGEPGEIADVVAWLASDAASYVTGEIV  247
            +APG I T++++   L  D+ R  I+   P+GRLG + ++A+    LASD +SY+TG  +
Sbjct  226  IAPGLIHTDITGG--LMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  248  TVDGGRM  254
             V+GG +
Sbjct  284  DVNGGML  290

1088) B5T_01632 in NC_018691


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 161/251 (65%), Gaps = 12/251 (4%)

Query  4    FDQKTVLITGAAS--GIGRAAALRFAEEGARLVLVDRNLAGLEETRATLPAGTEATLREV  61
            ++ K  +ITGAAS  GIGRA+A+ FA++GAR+V++D + ++  ++ ATL  G +  L   
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG-HLGL-AA  103

Query  62   NVADEQAVKTLVDDIAASHGGIQVLINNAGTAGNDHSPVTDNNTENWNTILSVNLLGPMF  121
            NVADE  VK  V  I    G I+VL+NNAG +  +     D    + + +L V+L G ++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGIT--QPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  FIRAVAPYMKEQGGGAIVNTASVAGIRSGA--GGNAYSASKAGVISLTKTTACDLGGYNV  179
              +AV P M+ QG+G+IV  +SV++ R+G+  GG  YSA+KAGV++L K+ A ++G  ++
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  RVNAVCPGLIETGMTKPVFDYARENNKEEKLGSRCELRRYGRPSEIaaamaflasddasY  239
            R+N++ PGLI+T++T  + +  R +   E +     L R G + ++A A  FLASD +SY
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGI----PLGRLGAAQDVANAALFLASDLSSY  277

Query  240  VTGQALAVDGG  250
            +TG +L V+GG
Sbjct  278  LTGITLDVNGG  288

1089) ambt_09985 in NC_015554


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 99/245 (41%), Positives = 166/245 (68%), Gaps = 6/245 (2%)

Query  4    LEGKVALVTGAS--RGIGKAIASQLaaqgatvvgtatSESGASAITEYLSEFGGKGIALN  61
            L+GK+A++TGA+  RGIG+A A  +A +GA VV     ES+A   +  L+E G  G+A N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  62   VTDKDSIDAIIKEINDTFGGIDILVNNAGITRDNLLMRMKDDEWQDIINTNLTAIFTLSK  121
            V+D   +   +  I + FG ID+LVNNAGIT+    + ++ ++ + +++ +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVLRGMMKKRFGRIVNIGSVVgssgna--gqanyaaakagVIGFSKSMAREVASRGITIN  179
            AV+  M  +  G IV ++SV +  G +  G ++Y+AAKAGV+G++K+MARE ++  I IN
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  VVAPGFIDTDMTKSL-TDDQKSAIFKDIPANRLGEPDEIAATVAFLVSSGAAYITGETIH  238
             +APG+I+TD+T +L  D+++ AI+ +IP  RLG ++++A +  FL S  ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGM  243
            VNGGM
Sbjct  285  VNGGM  289

1090) Desru_1733 in NC_015589


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 103/252 (41%), Positives = 170/252 (68%), Gaps = 9/252 (3%)

Query  1    MFLNGKVAIVTGAS--RGIGRAIALTMAGAQADIVINYAGRADAAEETAEMIRQLGRKAL  58
            M+L+GK+AI+TGA+  RGIGRA A+T A   A +VI   + + A + +A     LG   L
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAAT----LGEGHL  99

Query  59   VYRAdvsdsqqvqqMVEATVAEFGKIDILVNNAGITRDNLILRMKEEDWDTVMAVNLKSA  118
               A+V+D  QV+Q V + + +FG+ID+LVNNAGIT+    L ++  D D V+ V+L+++
Sbjct  100  GLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGT  159

Query  119  FNTIKAVAKPMVKARGGRIINISSVVglygna--gqanyaaakaglIGLTKTMAKELGSR  176
            +   +AV   M    +G I+ +SSV +  G +  G ++Y+AAKAG++GL K+MA+E+G+ 
Sbjct  160  LLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  177  NITVNAVAPGFIMTDMTENL-GGEAKEKLASSTALNRLGKPEDVASLVAFLASDFCGYIT  235
            +I +N++APG+I TD+T  L  +E ++ +  + +L RLG ++DVA+   FLASD+ +Y+T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  236  GQVIGVDGGIIL  247
            G  ++V+GG+++
Sbjct  280  GITLDVNGGMLI  291

1091) Pnap_3072 in NC_008781


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 164/246 (67%), Gaps = 7/246 (2%)

Query  6    FEGQVALVTGAS--RGIGAAIALELAKKGLRVTGTATTDEGAAKISRTLAAYPGCQGQTL  63
            ++G++A++TGA+  RGIG A A+ +A+ G RV      + +A   + TL+   G  G + 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLAA  103

Query  64   DVNDAAAAEALVNRIVTECGGLQVLVNNAGITRDMLAMRLKDDDWDAVLDTNLKAVFRMS  123
            +V D +     V  I+ + G ++VLVNNAGIT+ + ++ ++ +D D VLD +L++ + MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  124  RAVMRCMMKQRYGRIISITSVVgasgnagqany--aaakagvagmtraLARELGSRSITV  181
            +AV+  M  Q  G I+ ++SV +  G +  +    +AAKAGV G+ +A+ARE+G+  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  182  NCVAPGFIETDMTARL-PEEQQKALLGQIPLGHLGKPQDIAHAVAFLASPLASYITGQEI  240
            N +APG+I+TD+T+ L  +E++ A++  IPLG+LG +QD+A+A  FLAS L+SY+TG  +
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  241  HVNGGM  246
            +VNGGM
Sbjct  284  DVNGGM  289

1092) MDS_1682 in NC_015410


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 165/249 (67%), Gaps = 8/249 (3%)

Query  1    MSLQGKVALVTGAS--RGIGQAIALELGRQGAIVIGTATSASGAERIAATLKEHGISGTG  58
            M LQGK+A++TGA+  RGIG+A A+ ++++GA V+      S+A   AATL E   +  G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE---GHLG  100

Query  59   MELNVTSAESVEAVLGAIAEQFGAPAILVNNAGITRDNLMLRMKDDEWFDVIDTNLNSLY  118
            +  NV+    V   +++I E+FG   +LVNNAGIT+    L ++ ++   V+D +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RLSKGVLRGMTKARFGRIINIGSVVgamgnag--qanyaaakagLEGFSRALAREVGSRG  176
             +S++V+  M     G I+ ++SV +  G +    ++Y+AAKAG+ G+++A+ARE G+  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITVNSVAPGFIDTDMTREL-PEAQRDALLTQIPLGRLGQAEEIAKVVGFLASDGAGYVTG  235
            I +NS+APG+I+TD+T  L  + +R+A++  IPLGRLG A+++A+   FLASD ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ATIPVNGGM  244
             T+ VNGGM
Sbjct  281  ITLDVNGGM  289

1093) fabG in NC_021033


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  104 bits (378),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 165/247 (67%), Gaps = 7/247 (2%)

Query  5    LKDKIALVTGAS--RGIGEAIALELASRGASVIGTATSESGAKQITEKLSEFGGEGKVLN  62
            L++KIA++TGA+  RGIG A A+ +A +GA V+     ES+A++ +  L+E G  G   N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  63   VTDAAASEELVKEIVE-MGGPHILVNNAGITRDNLIMRMKDEEWDDIIQTNLTSVFRLSR  121
            V+D +   + V  I+E  G  ++LVNNAGIT+    + ++  + D +++ +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  122  AVVRPMMKARDGRIINITSVVGMTGN--IgqanyaaakagvagMTRSLARELGSRNITVN  179
            AV+  M     G I+ ++SV +  G   +G ++Y+AAKAGV G+ +++ARE+G+ +I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  180  CVAPGFIDTAMTRAL-GDEAAQKLISQIPLGRLGSVKDIAYAVAFLASPYAGYITGETIN  238
             +APG+I+T +T +L  DE  + +I  IPLGRLG+ +D+A A  FLAS  ++Y+TG T++
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  239  VNGGMFI  245
            VNGGM+I
Sbjct  285  VNGGMLI  291

1094) fabG1 in NC_022247


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  104 bits (378),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 171/246 (70%), Gaps = 8/246 (3%)

Query  6    FEGQVALVTGAS--RGIGAAIALELAQRGLKVVGTGTTEDSAAKITSALSAFDGR-GRAL  62
            ++G++A++TGA+  RGIG A A+ +AQ+G +VV  +  E +A   +++L+  +G+ G A 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG--EGHLGLAA  103

Query  63   DVNDAVAVEALIDEIVQAYGAIHVLVNNAGITRDTLAMRMKDDDWDAVLDTNLKAVFRLS  122
            +V D   V   +  I++ +G I+VLVNNAGIT+   ++ ++ +D D VLD +L++ + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  123  RAVIRPMMKQRYGRIISITSVVgasgnagqany--aaakagvagmtraLARELGSRNITV  180
            +AVI  M  Q  G I+ ++SV +  G +  +    +AAKAGV G+ +A+ARE+G+ +I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVAPGFIETDMTASL-PEaqqqallqqIPLGHLGKPADIAHAVAYLASPQASYVTGQEL  239
            N +APG+I+TD+T++L  + +++A+++ IPLG+LG + D+A+A  +LAS  +SY+TG  L
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  240  HVNGGM  245
            +VNGGM
Sbjct  284  DVNGGM  289

1095) Franean1_3233 in NC_009921


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 131/207 (64%), Gaps = 8/207 (3%)

Query  33   VVIGDIDKDTASAQAEALHADIGRPAEGTGVDVADSTAVTAWIDDVAARHGRIDVLINNA  92
            VVI D+D  +A   A +L    G    G + +VAD + V   +  +  + GRIDVL+NNA
Sbjct  77   VVILDLDESAARDAAATL----GEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNA  132

Query  93   GIIRDNRITDISDADWHAVVDVSLTGSFHCARAVIPHMRARSYGRIVSFSSMSWR---GN  149
            GI +  +  DI  +D + V+DVSL G++  ++AVIP MRA++ G IV  SS+S +   G 
Sbjct  133  GITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGI  192

Query  150  FGQANYVAAKAGIVGLTRAIALETARDGITVNAIAPGLIETPMLAS-MNTAAREKLIGKV  208
            FG ++Y AAKAG++GL +A+A E + D I +N+IAPGLI+T + ++ M+   R+ +I  +
Sbjct  193  FGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGI  252

Query  209  PQRTTGQPVDIAEAAAFLTCPAAGYIT  235
            P    G + D+A+AA FL+   ++Y+T
Sbjct  253  PLGRLGAAQDVANAALFLASDLSSYLT  279

1096) Vapar_1391 in NC_012791


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 169/246 (69%), Gaps = 8/246 (3%)

Query  6    FEGQVALVTGAS--RGIGAAIALELAQRGLKVVGTGTTEDSAAKITSALSAFDGR-GRAL  62
            ++G++A++TGA+  RGIG A A+ +AQ+G +VV  +  E +A   +++L+  +G+ G A 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG--EGHLGLAA  103

Query  63   DVNDAVAVEALIDEIVKAYGAIHVLVNNAGITRDTLAMRMKDDDWDAVLDTNLKAVFRLS  122
            +V D   V   +  I+  +G I+VLVNNAGIT+   ++ ++ +D D VLD +L++ + +S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  123  RAVIRPMMKQRYGRIISITSVVgasgnagqany--aaakagvagmtraLARELGSRSITV  180
            +AVI  M  Q  G I+ ++SV +  G +  +    +AAKAGV G+ +A+ARE+G+  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  181  NCVAPGFIETDMTASL-PEaqqqallqqIPLGHLGKPADIAHAVAYLASPQASYVTGQEL  239
            N +APG+I+TD+T++L  + +++A+++ IPLG+LG + D+A+A  +LAS  +SY+TG  L
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  240  HVNGGM  245
            +VNGGM
Sbjct  284  DVNGGM  289

1097) MASS_4710 in NC_021282


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  103 bits (375),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 102/250 (41%), Positives = 164/250 (66%), Gaps = 17/250 (6%)

Query  7    LLQGKNVIVTggarglgaafarHIV--SQCGRVVIADVLDDDGRQLAAELGDAARFTHL-  63
            LLQGK  I+TG+A   G + A  +    + +RVVI D+ +  +R+ AA LG++    HL 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HLG  100

Query  64   ---DVTDAEQWRELIDTTLAEFGTITGLVNNAGISSAAMVADEPLEHFRKVIEINLVGVF  120
               +V+D  Q ++ + T + +FG I  LVNNAGI+ +    D    ++ KV++++L G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  IGMQAVIPSMRAHGCGSIVNISSAAGLVGLALTSG--YGASKWGVRGLSKVAAIELGPER  178
            +  QAVIP+MRA+G GSIV +SS ++  G ++ +G  Y+A+K GV GL+K  A E+GP++
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNSVHPGVIYTPMTAKEGFREGEGNMPI---VAMgrvgaadevagavaYLLSDAASYV  235
            IR+NS+ PG+I T +T+  G+ ++E   +I   +++GR+GAA++VA A  +L SD +SY+
Sbjct  221  IRINSIAPGLIHTDITG--GLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGAELAVDGG  245
            TG  L V+GG
Sbjct  279  TGITLDVNGG  288

1098) MYCMA_2579 in NC_018150


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  103 bits (375),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 102/250 (41%), Positives = 164/250 (66%), Gaps = 17/250 (6%)

Query  7    LLQGKNVIVTggarglgaafarHIV--SQCGRVVIADVLDDDGRQLAAELGDAARFTHL-  63
            LLQGK  I+TG+A   G + A  +    + +RVVI D+ +  +R+ AA LG++    HL 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG----HLG  100

Query  64   ---DVTDAEQWRELIDTTLAEFGTITGLVNNAGISSAAMVADEPLEHFRKVIEINLVGVF  120
               +V+D  Q ++ + T + +FG I  LVNNAGI+ +    D    ++ KV++++L G +
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  121  IGMQAVIPSMRAHGCGSIVNISSAAGLVGLALTSG--YGASKWGVRGLSKVAAIELGPER  178
            +  QAVIP+MRA+G GSIV +SS ++  G ++ +G  Y+A+K GV GL+K  A E+GP++
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  179  IRVNSVHPGVIYTPMTAKEGFREGEGNMPI---VAMgrvgaadevagavaYLLSDAASYV  235
            IR+NS+ PG+I T +T+  G+ ++E   +I   +++GR+GAA++VA A  +L SD +SY+
Sbjct  221  IRINSIAPGLIHTDITG--GLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYL  278

Query  236  TGAELAVDGG  245
            TG  L V+GG
Sbjct  279  TGITLDVNGG  288

1099) B446_26935 in NC_021985


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  103 bits (374),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 165/251 (66%), Gaps = 15/251 (5%)

Query  8    LTGRTAFVTGAAG--GIGRasavllaeagaavHCADRDAEGLHGTAELIGKGGGTARTHV  65
            L G+ A++TGAA+  GIGRA+AV +A+ GA V   D D  + +++A  +G G     ++V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  66   LDVTD-RTALASAVRAAGRLDVMAAIAGIMHSSSVLDTRDEDLDRVLDVNFKGVLYACQE  124
             D ++ + A+A+ +   GR+DV+   AGI ++   LD R  D D+VLDV+++G L   Q 
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  AARSMLAHDMPGSIVTMASGAVDTGGPGLL---CYGAAKAAVVQLTKTLATEVGPHGIRV  181
               +M A++ +GSIV M+S + + GG G++    Y+AAKA+V+ L K++A E GP+ IR+
Sbjct  166  VIPTMRAQG-SGSIVCMSSVSAQRGG-GIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  182  NAVAPGWVRTPMTA--RHDRQVQAHTEGLMARMSPLGRVGEPDDVAHTVLYLASDASAFM  239
            N++APG ++T +T+   +D + +A  EG+     PLGR+G ++DVA++ L+LASD S+++
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGI-----PLGRLGAAQDVANAALFLASDLSSYL  278

Query  240  TGQILRPNGGV  250
            TG  L  NGG+
Sbjct  279  TGITLDVNGGM  289

1100) fabG3 in NC_014974


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  103 bits (373),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 103/246 (42%), Positives = 164/246 (67%), Gaps = 10/246 (4%)

Query  1    MRLKDKVVLITGAA--HGIGRATLELFAQEGARLVACDleeeplreaaaatgalalPM--  56
            M L++K+ +ITGAA  +GIGRAT   FAQ+GAR+V  DL+E + R+AAA+ G   L +  
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAA  103

Query  57   NVADPLSVERGFQEALQAMGHLDGVVHYAGITRDNFHWKMPLEDWEAVLRVNLTGSFLVA  116
            NVAD   V ++    ++  G++D +V+ AGIT+      +   D + VL V+L G++L++
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  117  KAASEAMRERNPGSIV----LTSSRVYLGNLGQANYAASKAGVVGLTRTLALELGRYGIR  172
            +A   +MR + +GSIV    +++ R   G +G ++Y+A+KAGV+GL +++A E+G   IR
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGG-GIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  173  VNALAPGFIETRMTAK-VPEKVREKAIAATPLGRAGQPIEVAYAALFLVSDESSFITGQV  231
            +N++APG+I+T +T+  + +  R+  I + PLGR G + +VA AALFL SD SS++TG  
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  232  LFVDGG  237
            L V+GG
Sbjct  283  LDVNGG  288

1101) TVNIR_2307 in NC_019902


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  103 bits (373),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 145/225 (65%), Gaps = 14/225 (6%)

Query  28   QAGARVVITDIDEAEGRQAAGELGVEFEAL--DVSSRDSCRHAVQAIQERLGPVGVLCSN  85
            Q GARVVI D+DE+ +R+AA+ LG    +L  +V+     ++AV +I E++G ++VL +N
Sbjct  72   QHGARVVILDLDESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNN  131

Query  86   AGIFPQAPLDTMT--EDDWDTMIAVNLRGAFFMTQAVLPGMREQGYGRIVLTSSITGPVT  143
            AGI    P+ T+    +D D ++ V+LRG+++M+QAV+P MR QG G IV  SS+++   
Sbjct  132  AGI--TQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRG  189

Query  144  G--YPGWAHYGASKAGQLGFMRSAALECARDGITINAVMPGNV---LTEGLKAQGEDYLR  198
            G  + G +HY+A+KAG LG+ ++ A E + D I IN++ PG +   +T GL    ++  +
Sbjct  190  GGIFGG-PHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQ--DERRH  246

Query  199  EMAESIPTRALCEPQDIAFAVCFLASPEARYITGQTLIVDGGQIL  243
             + E+IP   L  +QD+A A  FLAS  + Y+TG TL V+GG ++
Sbjct  247  AIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGMLI  291

1102) fabG in NC_008390


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 170/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARLGATVIGTATSESGAAAITARFAEAGVTGRGav  62
            L+ ++AI+TGA+  RGIGRA A+ +A+ GA V+     ES+A   +A ++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALHVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNPg--qanyaaakagvagmtraLAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G      ++Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1103) Caur_2733 in NC_010175


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 107/246 (44%), Positives = 174/246 (71%), Gaps = 8/246 (3%)

Query  4    LRGRTAIVTGAG--RGIGYAIATAFVEHGAQVALLD-RDAAVVPAAERLGDRVQGvvadv  60
            L+G+ AI+TGA+  RGIG A A +F +HGA+V +LD  ++A   AA  LG+   G+ A+V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  61   aiaaevdtavNHVLHQWGRIDILVNNAAVLSSAPFLDLTPAEWERTLAVNLTAIYHTCRA  120
            A  ++V  AV  ++++ GRID+LVNNA++  +   LD+ P++ ++ L V+L +     +A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  121  VVPAMIATGYGRLITIASVAGKRGGGILgsaaysaakagaIGLTKALARELAPHGITANT  180
            V+P+M A G G ++ ++SV+++RGGGI+G++ YSAAKAG +GL KA+ARE++P+ I  N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  181  ICPGPVETTLLSVMTPELRERAQRL---IPLGRfalpaevaaaalflasteasfITGETI  237
            I PG ++T + + +  +  ER + +   IPLGR++ + +VA AALFLAS  +S++TG T+
Sbjct  226  IAPGLIHTDITGGLMQD--ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  238  DVDGGL  243
            DV+GG+
Sbjct  284  DVNGGM  289

1104) Chy400_2957 in NC_012032


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 107/246 (44%), Positives = 174/246 (71%), Gaps = 8/246 (3%)

Query  4    LRGRTAIVTGAG--RGIGYAIATAFVEHGAQVALLD-RDAAVVPAAERLGDRVQGvvadv  60
            L+G+ AI+TGA+  RGIG A A +F +HGA+V +LD  ++A   AA  LG+   G+ A+V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  61   aiaaevdtavNHVLHQWGRIDILVNNAAVLSSAPFLDLTPAEWERTLAVNLTAIYHTCRA  120
            A  ++V  AV  ++++ GRID+LVNNA++  +   LD+ P++ ++ L V+L +     +A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  121  VVPAMIATGYGRLITIASVAGKRGGGILgsaaysaakagaIGLTKALARELAPHGITANT  180
            V+P+M A G G ++ ++SV+++RGGGI+G++ YSAAKAG +GL KA+ARE++P+ I  N+
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  181  ICPGPVETTLLSVMTPELRERAQRL---IPLGRfalpaevaaaalflasteasfITGETI  237
            I PG ++T + + +  +  ER + +   IPLGR++ + +VA AALFLAS  +S++TG T+
Sbjct  226  IAPGLIHTDITGGLMQD--ERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  238  DVDGGL  243
            DV+GG+
Sbjct  284  DVNGGM  289

1105) Mfla_1505 in NC_007947


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  101 bits (367),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 161/246 (66%), Gaps = 6/246 (2%)

Query  1    MLEGQVALVTGAS--RGIGAAIAQELAKQGAKVVGTATSESGAANITQSLSAHGGIGLAL  58
            +L+G++A++TGA+  RGIG A A  +A++GA+VV     ES+A + + +L+  G +GLA 
Sbjct  45   LLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAA  103

Query  59   DVNDAGQVEAVLKNIAGQFGDVTILVNNAGITRDTLLMRMKDEDWDAVIATNLTSVYRMS  118
            +V D +QV   +  I  +FG + +LVNNAGIT+    + ++  D D V+  +L +   MS
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  119  QAVLRPMMKARSGRIINISSVVGHMGNPg--qanyaaakagmagFTRSLAAEVGSRGITV  176
            QAV+  M    SG I+ +SSV ++ G      ++Y+AAKAG+ G+ +++A E G+  I +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  177  NCVAPGFIDTDMTREL-PDNVREELLKRVPAGRFGDVKDIaaavaflaspaaGYITGETL  235
            N +APG+I+TD+T  L  D+ R+ ++  +P GR+G  +D+A A  FLAS  ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  HVNGGM  241
            +VNGGM
Sbjct  284  DVNGGM  289

1106) fabG in NC_010645


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  101 bits (366),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 102/248 (42%), Positives = 168/248 (68%), Gaps = 6/248 (2%)

Query  8    LEGKIALVTGAT--RGIGQAIAQELAARGAKVVGTATSESGAAAITEALSASGGRGvvln  65
            L+GKIA++TGA+  RGIG+A A  +A +GA+VV     ES+A   + +L+  G  G+  N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  66   vtdaaavdalldelGKEGGGPHILVNNAGITRDTLAMRMKDEDWSAVIDTNLSSVFRLSR  125
            V+D + V   +  +  + G  ++LVNNAGIT+   ++ ++  D   V+D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  126  AVLRNMMKARWGRIINITSVVgssgnag--qanyaaakagVSGMTRALARELGSRNITVN  183
            AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+ +A+ARE+G+ +I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  184  CVAPGFIDTDMTR-VLGEEQTAALLQQIPLGRLGAPADIANAVGFLASPLAGYITGTTLH  242
             +APG+I+TD+T  ++ +E+  A+++ IPLGRLGA+ D+ANA  FLAS L++Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  243  VNGGMYMQ  250
            VNGGM ++
Sbjct  285  VNGGMLIH  292

1107) Hbor_34580 in NC_014731


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score =  101 bits (367),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 106/260 (41%), Positives = 167/260 (65%), Gaps = 18/260 (6%)

Query  1    MSLLEGKTAVItgssggig--rgiartFADHGASVVVADISEEPREGGTPTHELLQEEGA  58
            + LL+GK A+ITG+++  G  R+ A TFA+HGA VV+ D+ E +  ++++T       G 
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL------GE  96

Query  59   ESMYVECDVSdyddcvaaveaa-deFGGIDVMVNNAGIVGPQDPLVDIDLEDYRNLISIN  117
              + +  +V+D  +   AV +  ++FG IDV+VNNAGI  P   L DI   DY +++ ++
Sbjct  97   GHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTL-DIRPGDYDKVLDVS  155

Query  118  LDGVVHGSKAAALAMLEQGVHGSIVNMSSVAGITG---FGGITPYSAAKGGVRSFTYALA  174
            L G +  S+A   +M  QG  GSIV MSSV++  G   FGG   YSAAK+GV ++  A+A
Sbjct  156  LRGTLLMSQAVIPTMRAQGS-GSIVCMSSVSAQRGGGIFGG-PHYSAAKAGVLGLGKAMA  213

Query  175  SELGPDGIRVNAVHPGIIETTMTTEDSPFVGTEQEEKMLPTIPLRRVGQPEDVAGVVTFL  234
             E+GPD IR+N++ PG+I+T +T   + ++  E+ + ++  IPL R+G ++DVA    FL
Sbjct  214  REFGPDQIRINSIAPGLIHTDIT---GGLMQDERRHAIIEGIPLGRLGAAQDVANAALFL  270

Query  235  ASDLASYVTAESVIVDGGQL  254
            ASDL+SY+T+ ++ V+GG L
Sbjct  271  ASDLSSYLTGITLDVNGGML  290

1108) 3SC5B7.15c in NC_003888


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 141/222 (64%), Gaps = 10/222 (4%)

Query  32   EGARVLLTDVDLVGARRTAAELADDGLDATAFACDVSDRESVETAVAHAVETFGGLDVLV  91
            +GARV++ D+D  +AR +AA L+++ L   ++A +V+D   V  AVA  +E FG +DVLV
Sbjct  73   HGARVVILDLDESAARDAAATLGEGHL---GLAANVADESQVKQAVATIIEHFGRIDVLV  129

Query  92   NNAFACTPDAPLFEDEPDDVWARDLDVTLTGAQRCCRAALPHLAASGRGAIVSIGSVNGV  151
            NNA    P   L +  P+D   + LDV+L G+    +A +P + A G G+IV ++SV++ 
Sbjct  130  NNAGITQPIKTL-DIRPGD-YDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  152  QD---FGNHAYSAAKAGLASLTRTLAGHAGPRGVRVNLVTPGTVRTTAWEG--RDEELAA  206
            ++   FG   YSAAKAG+ +L +++A + GP  +R+N ++PG ++T    G  +DE   A
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDERRHA  247

Query  207  VRGLYPLGRVGEPEDVAAAVAFLASRDAAWITGTTLAVDGGL  248
            +    PLGR+G ++DVA A  FLAS  ++ +TG TL V+GG+
Sbjct  248  IIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGM  289

1109) CLDAP_15130 in NC_017079


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 99.1 bits (357),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 157/229 (69%), Gaps = 10/229 (4%)

Query  25   KFAQEGAAVGVLDIDEAACQRVVDEItatggralalgadvadeqqveaavaRLRNAFGLI  84
             FAQ+GA V +LD+DE+A +   D  ++ G   L+L+A+VADE QV  AVA + + FG I
Sbjct  69   TFAQHGARVVILDLDESAAR---DAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRI  125

Query  85   NVLVNNAAVMPAGRLHETSPADFDRCVAVNLRGAYLVSRAVIPHMLELRQGSIIHMASVT  144
            +VLVNNA++  + +  +  P+D+D+ + V+LRG+ L+S+AVIP M     GSI+ M+SV+
Sbjct  126  DVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVS  185

Query  145  G--VIGLPGLAVYSATKGALIALARAMSTDYARLGIRVNTVSPGTIDSPMLHNFLAAQSA  202
            +    G+ G + YSA+K+++++L++AM+ +++   IR+N+++PG I++ +   ++  +  
Sbjct  186  AQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQDER-  244

Query  203  PDRLRRAFDEMHPIGRVGTIEEVANVFLFLASDESSFVTGANYMVDGGI  251
                R+A+ E  P+GR+G+ ++VAN  LFLASD SS++TG    V+GG+
Sbjct  245  ----RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGM  289

1110) fabG in NC_006513


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 169/247 (69%), Gaps = 8/247 (3%)

Query  8    LNGAVALVTGAS--RGIGRAVALELGRLGATVVGTATSEAGAAEIGKSLREAGTEGCGLA  65
            L+G +A++TGA+  RGIGRA A+ +++ GA VV     E++A + + +L E+     GLA
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  66   LDVTDGAACEAAVREVEKRFGAIGILVNNAGITRDNLALRMKDDEWEVVIDTNLKSVFRM  125
             +V+D +    AV  +  +FG I++LVNNAGIT+   +L ++ ++ + V+D +L++ + M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  126  SRLVMRGMMKARGGRIINITSVVGSAGNPg--qanyaaakagvagmsraLARELGSRNIT  183
            S+ V+  M    +G I+ ++SV +  G      ++Y+AAKAGV G+++A+ARE+G+ +I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  184  VNCVAPGFIDTDMTRAL-PEAARDALLGNIALGRLGRPEEIaaavaflaspaaaYVTGTT  242
            +N +APG+I+TD+T +L  +  R+A++  I+LGRLG ++++A A  FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  243  LHVNGGM  249
            L+VNGGM
Sbjct  283  LDVNGGM  289

1111) fabG in NC_008702


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 172/247 (70%), Gaps = 8/247 (3%)

Query  5    LEGQIALVTGAS--RGIGRAVAMELARLGAVVVGTATSEAGAADIDNALAEAGFKGAGLA  62
            L+G+IA++TGA+  RGIGRA A+ +A+ GA VV     E++A D   +L+E+ +   GLA
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   LDVTDVAACEGLIAEVEKRFGAVCILVNNAGITRDNLAMRMKDDEWDAVIDTNLKAVFRM  122
             +V+D +     +A +  +FG + +LVNNAGIT+   ++ ++ ++ D V+D +L++ + M
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRLVMRGMMKARTGRIINITSVVgsagnag--qanyaaakagvagmsraLARELGSRNIT  180
            S+ V+  M    +G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +I 
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  181  VNCVAPGFIDTDMTRAL-PDSARDALLGSIALGRLGRPEEIaaavaflaspaaaYVTGTT  239
            +N +APG+I+TD+T +L  D  R+A++ +I+LGRLG ++++A A  FLAS  ++Y+TG T
Sbjct  223  INSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGIT  282

Query  240  LHVNGGM  246
            L+VNGGM
Sbjct  283  LDVNGGM  289

1112) fabG in NC_021659


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 96.8 bits (348),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 88/217 (41%), Positives = 143/217 (66%), Gaps = 5/217 (2%)

Query  29   RIAIVARDPQRLQQAARQIGPGTRHYAADLSRRGEVEEVVARLAEDLGTVDVLVNNAGFT  88
            R+ I+  D    ++AA  +G G    AA+++  ++V + VA + E++G +DVLVNNAG+T
Sbjct  76   RVVILDLDESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGIT  135

Query  89   RVIAADTPLAQAEREWDAVIEGNLKSTFLFTLAMLPHLRKPG-GRIINLSSIAAQCGSGS  147
            + I     L     + D V++ +L++T+L + A++P +R  G G I+ +SS++AQ G+G 
Sbjct  136  QPI---KTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGI  192

Query  148  PGALGYSAAKAGVQGFTLNLARELGPQGITVNAIAPGFIADTRFFGAGLPQERIDAIAAE  207
             G+  YSAAKAGV G+   +ARE+GP+ I +N+IAPG+I +T + G+ + +ER +AI   
Sbjct  193  FGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLI-HTDITGGLMQDERRHAIIEG  251

Query  208  TPLARTGRVEDIaaaalwlaSEQASFITGTITSINGG  244
             PL+R G  +D+A AAL LAS+ +S++TG    +NGG
Sbjct  252  IPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGG  288

1113) nodG in NC_021591


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 96.5 bits (347),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 87/217 (41%), Positives = 143/217 (66%), Gaps = 5/217 (2%)

Query  29   RIAIVARDPQRLQQAARQIGPGTRHYAADLSRRGEVEEVVARLAEDLGTVDVLVNNAGFT  88
            R+ I+  D    ++AA  +G G    AA+++  ++V + VA + E++G +DVLVNNAG+T
Sbjct  76   RVVILDLDESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGIT  135

Query  89   RVIAADTPLAQAEREWDAVIEGNLKSTFLFTLAMLPHLRKPG-GRIINLSSIAAQCGSGS  147
            + I     L     + D V++ +L++T+L + A++P +R  G G I+ +SS++AQ G+G 
Sbjct  136  QPI---KTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGI  192

Query  148  PGALGYSAAKAGVQGFTLNLARELGPQGITVNAIAPGFIADTRFFGAGLPQDRIDAIAAE  207
             G+  YSAAKAGV G+   +ARE+GP+ I +N+IAPG+I +T + G+ + ++R +AI   
Sbjct  193  FGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLI-HTDITGGLMQDERRHAIIEG  251

Query  208  TPLARTGRVEDIaaaalwlaSEQASFITGTITSINGG  244
             PL+R G  +D+A AAL LAS+ +S++TG    +NGG
Sbjct  252  IPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGG  288

1114) Caul_2722 in NC_010338


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 156/248 (63%), Gaps = 15/248 (6%)

Query  9    LFSLEGKVALVTGAS--RGIgaaladglagaggSVIGVA-RSPAPREA---FGHTIRYVA  62
            L  L+GK+A++TGA+  RGIG A A  +A  G+ V+ +    +A+R+A   +G+    +A
Sbjct  43   LMLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLA  102

Query  63   ADIAAG--VEALVADIVAEHGRIDVLVNAAGVSLAASSPDQALAAFDATLDINLRaayaa  120
            A++A    V   VA I+ + GRIDVLVN AG++ +  + D   + +D  LD++LR++   
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  121  clavaPHM--ESGGSIINVTSINSLVG---FPGNPGYVAAKGGLRMLTKALAVDLGPRGV  175
              AV P M  +++GSI+ ++S+++  G   F G P Y AAK+G+  L KA+A ++GP  +
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIF-GGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  176  RVNALAPGYIHTDMTAASFADPERHAARARHTCLGRWGEVDDLVGAAIFLASDASRYMTG  235
            R+N++APG IHTD+T++   D  RHA       LGR G  +D+  AA+FLASD S Y+TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAI-IEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  QDLVIDGG  243
              L ++GG
Sbjct  281  ITLDVNGG  288

1115) PPUBIRD1_2624 in NC_017530


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 96.0 bits (345),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 136/221 (62%), Gaps = 23/221 (10%)

Query  48   DLDKC--RELAATLGEHSAGEVSALACDIADPASVEqaaaqvqaLHGRCDVLVNNASVLR  105
            DLD    R+ AATLGE   G    LA ++AD + V QA A +    GR DVLVNNA++ +
Sbjct  81   DLDESAARDAAATLGEGHLG----LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQ  136

Query  106  PGALDTLSL--EQWNQVLAVNLSGYLLCAQAFGRSMLDCGQGRIVHVASIAAH-----YP  158
            P  + TL +   + ++VL V+L G LL +QA   +M   G G IV ++S++A+     + 
Sbjct  137  P--IKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFG  194

Query  159  QPNSGAYSAAKAGVSMLSRQIAVEWGPRGVRSNAVCPGLIRTPLSAAFYADPQVERRRSA  218
             P+   YSAAKAGV  L++ +A E GP  +R N++ PGLI+T +++++  D   ERR++ 
Sbjct  195  GPH---YSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQD---ERRHAI  248

Query  219  MTANQ--RIGEPQDIAEAVLFLASRRADYINGAELTVDGGL  257
            + +    R+G +QD+A+A LFLAS  + Y+ G  L V+GG+
Sbjct  249  IEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGGM  289

1116) NOCYR_2311 in NC_016887


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 95.4 bits (343),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 103/256 (41%), Positives = 164/256 (65%), Gaps = 18/256 (7%)

Query  1    MTQETRTAIVTGAA--RGIGAAVAKRLAADGMAVAVLDLDASACAGTVDAITAAGGRala  58
            M  + + AI+TGAA  RGIG A A  +A +G  V +LDLD SA   + DA ++ G   L+
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESA---ARDAAATLGEGHLG  100

Query  59   vgadvageaavTRAVEQITDALGAPTVLVNNAGIIRDNLLFKMTVDDWDAVMNVHLRGAF  118
            ++A+VA+E+ V +AV  I + +G   VLVNNAGI +    + +  +D D V++V LRG++
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  LMTRAVQQHMVEAGFGRIVNLSSTSALGNR-----GQANYSAAKAGMQGLTKTLAIELGK  173
            LM++AV   M   G G IV +SS SA  +R     G ++YSAAKAG+ GL K++A E+G 
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSA--QRGGGIFGGPHYSAAKAGVLGLGKAMAREFGP  218

Query  174  FGVTANAIAPGFIETEMTAATAARVGMPFDDFKKAMAQQIPVQRTGTPDDIAHTASFLVS  233
              +  N+IAPG+I+T++T+      G+  D+ + A+ + IP+ R G+++D+A++A FL S
Sbjct  219  DQIRINSIAPGLIHTDITG------GLMQDERRHAIIEGIPLGRLGAAQDVANAALFLAS  272

Query  234  PGAGFVSGQVIYVAGG  249
              +++++G  + V GG
Sbjct  273  DLSSYLTGITLDVNGG  288

1117) NH44784_026741 in NC_021285


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 94.9 bits (341),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 140/232 (61%), Gaps = 20/232 (8%)

Query  34   ARAGYRVVVSDVDAQRARRVADELGAPHSAHAFDVSDESAVETAFDQIEQAHGPIAVLVS  93
            A+ G RVV+ D+D   AR  A  LG  H + A +V+DES V  A   I +  G I VLV+
Sbjct  71   AQHGARVVILDLDESAARDAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVN  130

Query  94   AAGLLLFQPNGERPLIKDTTLDIW----ERSFAVNARGVFLCGRAYLRRREAAPLKHGRI  149
             AG+        +P+    TLDI+    ++ + V+ RG +L ++A +    A     G I
Sbjct  131  NAGI-------TQPI---KTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQG--SGSI  178

Query  150  VTFTSVAAQLGG--YRSSASYIAAKSAVLGLTKAMARESAHLGVTVNGIAPGLIDTDMLR  207
            V  +SV+AQ GG  + +++ Y AAK++VLGL KAMARE +   + +N+IAPGLI+TD + 
Sbjct  179  VCMSSVSAQRGGGIF-GGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTD-IT  236

Query  208  STVTSSGalaaaaqaIPLGRIGTVDDVAAAVRFLASEEAGYITGSVIDVNGG  259
            + +       A  ++IPLGR+G+ +DVA A  FLAS+ ++Y+TG  +DVNGG
Sbjct  237  GGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGG  288

1118) fabG in NC_019382


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 94.9 bits (341),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 174/252 (70%), Gaps = 14/252 (5%)

Query  8    LQGKIALVTGAT--RGIGRAIAQELaargatvvgtatSEAGAQAITEALAAQGGRGVVLD  65
            LQGKIA++TGA+  RGIGRA A  +A +GA VV     E++A+  + +L+ +G  G+  +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-EGHLGLAAN  104

Query  66   VTDA----QACEALIEQLGKEGGGPHILVNNAGITRDTLAMRMKDDDWSAVIDTNLASVF  121
            V+D     QA  ++IE++G+     ++LVNNAGIT+   ++ ++ +D   V+D +L + +
Sbjct  105  VADESQVKQAVATIIEHFGR----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  RLSRAVLRGMMKARWGRIINITSVVgasgnag--qanyaaakagvagmsraLARELGSRN  179
             +S+AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNCVAPGFIDTDMTR-ILGEDQTAALLQQIPLGRLGAPADIAHAVAFLAGPQAGYITG  238
            I +N +APG+I+TD+T  ++ +++  A+++ IPLGRLGA+ D+A+A  FLA+  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  TTLHVNGGMYMQ  250
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

1119) RHA1_ro01501 in NC_008268


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 94.4 bits (339),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 103/251 (42%), Positives = 161/251 (65%), Gaps = 18/251 (7%)

Query  7    RTAIVTGAA--RGIGAAVAKKLASDGYAVAVLDLDESACAATVDAIESTGGRALAVGanv  64
            + AI+TGAA  RGIG A A  +A +G  V +LDLDESA   + DA  + G   L+++ANV
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESA---ARDAAATLGEGHLGLAANV  105

Query  65   adeasvaaavervateLGAPTILINNAGITRDNLLFKMTVDDWDAVMNVHLRGAFLMSRA  124
            ADE+ V  AV  +  ++G   +L+NNAGIT+    + +  +D D V++V LRG++LMS+A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  125  VQQHMVDAGFGRIVNLSSTSALGNR-----GQVNYSAAKAGMQGFTKTLAIELGKFGVTA  179
            V   M   G G IV +SS SA  +R     G  +YSAAKAG+ G+ K++A E+G   +  
Sbjct  166  VIPTMRAQGSGSIVCMSSVSA--QRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NAIAPGFIETEMTAATAERVGVGFEDFKKAAASQIPVNRVGQPEDIANTASFLASEGAGF  239
            N+IAPG+I+T++T++  +      ++ + A    IP+ R+G ++D+AN+A FLAS+ +++
Sbjct  224  NSIAPGLIHTDITGGLMQ------DERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  240  VSGQVIYVAGG  250
            ++G  + V GG
Sbjct  278  LTGITLDVNGG  288

1120) Saro_3667 in NC_009427


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 94.1 bits (338),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 100/248 (41%), Positives = 161/248 (65%), Gaps = 7/248 (2%)

Query  4    LSGKVAIVTGGA--RGMGAATSRLFVAEGAKVAIadvldeagealaaelgdaaRFFKLDV  61
            L GK+AI+TG+A  RG+G AT+  F  +GA+V I D+ + A+   AA LG++   +  +V
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANV  105

Query  62   TSEDNWASVVSEVEAALGPVDVLVNNAGILMFKSLLETTKADYEKVLGVNLVGEFLGIKA  121
            + E +    V+ +   +G +DVLVNNAGI      L+   +DY+KVL+V+L G +L  +A
Sbjct  106  ADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQA  165

Query  122  VAPGMIARGKGSIVNISSVDGMKGANSLVA--YASSKWGVRGLTKVAAMELGHKGIRVNS  179
            V P M A+G GSIV +SSV + +G+  + +  Y+++K GV GL K  A E+G   IR+NS
Sbjct  166  VIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINS  225

Query  180  VHPGGVDTVMSNHSGAAREDVDKGYAN-VPLQRIGGPEEVaaaslflasddasYLHGAEI  238
            + PG ++T ++  +G  +++   +  + +PL R+G++++VA A+LFLASD +SYL G  +
Sbjct  226  IAPGLIHTDIT--GGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  VVDGGMTV  246
             V+GGM +
Sbjct  284  DVNGGMLI  291

1121) fabG in NC_018268


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 93.9 bits (337),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 100/249 (41%), Positives = 160/249 (65%), Gaps = 8/249 (3%)

Query  1    MSLEGKVALVTGAT--RGIGKAVARALAEQGAEVIGTATTTAGAESISAELQAGGFKGYG  58
            M L+GK+A++TGA+  RGIG+A A ++A++GA V+      ++A   +A L  G +   G
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---G  100

Query  59   LVMNVADLKSIEDGLKTIAEKSGAPLILVNNAGITrdnlllrlkdddWADVLETNLTSVY  118
            L  NVAD   + +++ TI E  G   +LVNNAGIT+    L ++ +D   VL+ +L +  
Sbjct  101  LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  119  RTSKAVLRGMAKARWGRVINISSVVASMGNA--GQGNYCAAKAGVEGFTRSLAKEMSARG  176
              S+AV+  M     G ++ +SSV A  G +  G  +Y AAKAGV G+ +++A+E ++  
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  177  ITANCVAPGFIDTDMTRKL-DDGQRDAMLNVIPAGRLGEPEEvaavvaflasnaaayvTG  235
            I  N +APG+I+TD+T  L +D +R+A+++ IP GRLG +++VA    FLAS+ ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  236  ETIHVNGGM  244
             T++VNGGM
Sbjct  281  ITLDVNGGM  289

1122) MYA_1016 in NC_017920


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 93.3 bits (335),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 170/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARLGATVigtatsesgaaaisagfaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGRA A+ +A+ GA V+     ES+A   +A ++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNPg--qanyaaakagvagmtraLAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G      ++Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1123) fabG in NC_010084


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 93.3 bits (335),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARLGATVigtatsesgaaaitaafaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGRA A+ +A+ GA V+     ES+A   +A+++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNPg--qanyaaakagvagmtraLAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G      ++Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1124) fabG in NC_010804


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 93.3 bits (335),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 171/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARLGATVigtatsesgaaaitaafaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGRA A+ +A+ GA V+     ES+A   +A+++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNPg--qanyaaakagvagmtraLAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G      ++Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1125) fabG in NC_009256


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 93.3 bits (335),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 104/248 (42%), Positives = 170/248 (69%), Gaps = 10/248 (4%)

Query  5    LDKQVAIVTGAS--RGIGRAIALELARLGATVigtatsesgaaaisagfaeagVTGRGav  62
            L+ ++AI+TGA+  RGIGRA A+ +A+ GA V+     ES+A   +A ++E+ +   G  
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  63   lnvndaaaaealidaTVKEFGALNVLVNNAGITQDQLAMRMKDEDWDAVIDTNLKSVFRL  122
             NV D +     + + + +FG ++VLVNNAGITQ   ++ ++  D D V+D +L++ + +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  123  SRAVLRPMMKARG-GRIINITSVVGSAGNPg--qanyaaakagvagmtraLAREIGSRGI  179
            S+AV+ P M+A+G G I+ ++SV +  G      ++Y+AAKAGV G+ +A+ARE+G+  I
Sbjct  163  SQAVI-PTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNCVAPGFIDTDMTKTL-PEEQQAALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  238
             +N +APG+I+TD+T  L  +E++ A+   IPLGRLG+++D+A+A  FLAS  ++Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  239  TLHVNGGM  246
            TL+VNGGM
Sbjct  282  TLDVNGGM  289

1126) Xaut_2691 in NC_009720


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 93.1 bits (334),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/244 (42%), Positives = 159/244 (66%), Gaps = 13/244 (5%)

Query  5    ALITGAAD--GIGWAIARTLAATGWRLALVdldegaaaaraaelgaghlaVRADVSVEED  62
            A+ITGAA   GIG+A A T+A  G R+ ++DLDE+AA   AA LG GHL++ A+V+ E +
Sbjct  51   AIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADESQ  110

Query  63   VAEAMRRAVAAFGGLDAVVNNAGIADTHLPTVEQDAARFRKILDVDLTGVFLVSREAARV  122
            V +A+   +  FG +D +VNNAGI++  + T++  ++ + K+LDV L G +L+S+     
Sbjct  111  VKQAVATIIEHFGRIDVLVNNAGITQP-IKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPT  169

Query  123  MLPRRSGSIVNLSSIA-----GITGLPRRNAYGAAKAGVVALTRSMACEFGPAGIRVNAV  177
            M ++ SGSIV +SS++     GI G P+   Y+AAKAGV++L ++MA EFGP  IR+N++
Sbjct  170  MRAQGSGSIVCMSSVSAQRGGGIFGGPH---YSAAKAGVLGLGKAMAREFGPDQIRINSI  226

Query  178  APGYVETALVKALErdgridlgrirrriplgFLAQPDDIAQAVAFLVSPAARYVTGTVLS  237
            APG ++T +  +L +D R +       +    L+ ++D+A+A  FL S  + Y+TG  L 
Sbjct  227  APGLIHTDITGGLMQDERRHAIIEGIPLGR--LGAAQDVANAALFLASDLSSYLTGITLD  284

Query  238  VDGG  241
            V+GG
Sbjct  285  VNGG  288

1127) Smlt2604 in NC_010943


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 93.1 bits (334),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/251 (41%), Positives = 169/251 (68%), Gaps = 11/251 (4%)

Query  1    MSFQDKVAIVTGGG--RDIGRAVSIKLAAAGARVCINYANDEASAQETLARIQAAGGQAM  58
            M +Q+K+AI+TG++  R+IGRA ++ +A  GARV I    DE++A+++ A +   G   +
Sbjct  44   MLLQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAAATL---GEGHL  99

Query  59   VHRadvtdatavaglvaaaqaaFGERIDLLVNVAGGMVQRRPLADIDPVFFHTVMDLNLT  118
               A+V+D + V   VA+    FG RID+LVN AG     + L DI P  ++ V+D++L 
Sbjct  100  GLAANVADESQVKQAVATIIEHFG-RIDVLVNNAGITQPIKTL-DIRPGDYDKVLDVSLR  157

Query  119  STYLTTHAVVPHMRE--GAAIVNFASQAGRDGGGP-GASIYATAKAAVMTFTRAMAKELG  175
            +T L ++AV+P MR   +++IV  +S +++ GGG  G++ Y++AKA+V+ + +AMA+E+G
Sbjct  158  GTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFG  217

Query  176  PKGIRVNALCCGMIATRFHDEFTKPEVRTAVAGATPLRRQGapdeaadaavflasdaaaF  235
            P  IR+N++  G+I T + + + + E R A+  + PL R GA+++ A+AA+FLASD +++
Sbjct  218  PDQIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSY  277

Query  236  ITGANLDVNGG  246
            +TG  LDVNGG
Sbjct  278  LTGITLDVNGG  288

1128) Rcas_1253 in NC_009767


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 85/205 (42%), Positives = 128/205 (63%), Gaps = 3/205 (1%)

Query  53   DAIAATGRRSVALTADLSSTAPVEGVVSETITRLGRLDILVNNAGIIRRAPAVDYGWNDW  112
            DA A+ G   ++L+A+++  + V   V+  I ++GR+D+LVNNAGI +   ++D    D 
Sbjct  89   DAAATLGEGHLGLAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDY  148

Query  113  RAVLDVNLDAVWALCQAAGRPMIAQGHGKIINVASLLAFQGG--IRVPayaaakhavaGL  170
              VLDV+L +   + QA    M AQG G I+ ++S+ A +GG  +  P Y+AAK +V GL
Sbjct  149  DKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGL  208

Query  171  TKALANEWAHLGVNVNAIAPGYMVTDNTQALRDDPERSRQILERIPAGRWGVPADLAGAA  230
             KA+A E +   + +N+IAPG + TD T +L +D ER + I+E IP GR G + D+A AA
Sbjct  209  GKAMAREFGPDQIRINSIAPGLIHTDITGGLMQD-ERRHAIIEGIPLGRLGAAQDVANAA  267

Query  231  IFLASSASDYVHGHVLVVDGGWLAR  255
            +FLAS  S Y+ G  L V+GG L +
Sbjct  268  LFLASDLSSYLTGITLDVNGGMLIH  292

1129) fabG in NC_018829


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 174/252 (70%), Gaps = 14/252 (5%)

Query  8    LQGKIALVTGAT--RGIGRAIAQELaargatvvgtatSEAGAQAITEALAAQGGRGVVLD  65
            LQGKIA++TGA+  RGIGRA A  +A +GA VV     E++A+  + +L+ +G  G+  +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-EGHLGLAAN  104

Query  66   VTDA----QACEALIEQLGKDGGGPHILVNNAGITRDTLAMRMKDDDWSAVIDTNLAAVF  121
            V+D     QA  ++IE++G+     ++LVNNAGIT+   ++ ++ +D   V+D +L + +
Sbjct  105  VADESQVKQAVATIIEHFGR----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  RLSRAVLRGMMKARWGRIINITSVVgasgnag--qanyaaakagvagmaralaRELGSRN  179
             +S+AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNCVAPGFIDTDMTR-ILGEDQTAALLQQIPLGRLGAPADIAHAVAFLAGPQAGYITG  238
            I +N +APG+I+TD+T  ++ +++  A+++ IPLGRLGA+ D+A+A  FLA+  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  TTLHVNGGMYMQ  250
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

1130) fabG in NC_002927


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 174/252 (70%), Gaps = 14/252 (5%)

Query  8    LQGKIALVTGAT--RGIGRAIAQELaargatvvgtatSEAGAQAITEALAAQGGRGVVLD  65
            LQGKIA++TGA+  RGIGRA A  +A +GA VV     E++A+  + +L+ +G  G+  +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-EGHLGLAAN  104

Query  66   VTDA----QACEALIEQLGKDGGGPHILVNNAGITRDTLAMRMKDDDWSAVIDTNLAAVF  121
            V+D     QA  ++IE++G+     ++LVNNAGIT+   ++ ++ +D   V+D +L + +
Sbjct  105  VADESQVKQAVATIIEHFGR----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  RLSRAVLRGMMKARWGRIINITSVVgasgnag--qanyaaakagvagmaralaRELGSRN  179
             +S+AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNCVAPGFIDTDMTR-ILGEDQTAALLQQIPLGRLGAPADIAHAVAFLAGPQAGYITG  238
            I +N +APG+I+TD+T  ++ +++  A+++ IPLGRLGA+ D+A+A  FLA+  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  TTLHVNGGMYMQ  250
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

1131) fabG in NC_002928


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 174/252 (70%), Gaps = 14/252 (5%)

Query  8    LQGKIALVTGAT--RGIGRAIAQELaargatvvgtatSEAGAQAITEALAAQGGRGVVLD  65
            LQGKIA++TGA+  RGIGRA A  +A +GA VV     E++A+  + +L+ +G  G+  +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-EGHLGLAAN  104

Query  66   VTDA----QACEALIEQLGKDGGGPHILVNNAGITRDTLAMRMKDDDWSAVIDTNLAAVF  121
            V+D     QA  ++IE++G+     ++LVNNAGIT+   ++ ++ +D   V+D +L + +
Sbjct  105  VADESQVKQAVATIIEHFGR----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  RLSRAVLRGMMKARWGRIINITSVVgasgnag--qanyaaakagvagmaralaRELGSRN  179
             +S+AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNCVAPGFIDTDMTR-ILGEDQTAALLQQIPLGRLGAPADIAHAVAFLAGPQAGYITG  238
            I +N +APG+I+TD+T  ++ +++  A+++ IPLGRLGA+ D+A+A  FLA+  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  TTLHVNGGMYMQ  250
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

1132) fabG in NC_018518


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 174/252 (70%), Gaps = 14/252 (5%)

Query  8    LQGKIALVTGAT--RGIGRAIAQELaargatvvgtatSEAGAQAITEALAAQGGRGVVLD  65
            LQGKIA++TGA+  RGIGRA A  +A +GA VV     E++A+  + +L+ +G  G+  +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-EGHLGLAAN  104

Query  66   VTDA----QACEALIEQLGKDGGGPHILVNNAGITRDTLAMRMKDDDWSAVIDTNLAAVF  121
            V+D     QA  ++IE++G+     ++LVNNAGIT+   ++ ++ +D   V+D +L + +
Sbjct  105  VADESQVKQAVATIIEHFGR----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  RLSRAVLRGMMKARWGRIINITSVVgasgnag--qanyaaakagvagmaralaRELGSRN  179
             +S+AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNCVAPGFIDTDMTR-ILGEDQTAALLQQIPLGRLGAPADIAHAVAFLAGPQAGYITG  238
            I +N +APG+I+TD+T  ++ +++  A+++ IPLGRLGA+ D+A+A  FLA+  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  TTLHVNGGMYMQ  250
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

1133) fabG in NC_018828


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 174/252 (70%), Gaps = 14/252 (5%)

Query  8    LQGKIALVTGAT--RGIGRAIAQELaargatvvgtatSEAGAQAITEALAAQGGRGVVLD  65
            LQGKIA++TGA+  RGIGRA A  +A +GA VV     E++A+  + +L+ +G  G+  +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-EGHLGLAAN  104

Query  66   VTDA----QACEALIEQLGKDGGGPHILVNNAGITRDTLAMRMKDDDWSAVIDTNLAAVF  121
            V+D     QA  ++IE++G+     ++LVNNAGIT+   ++ ++ +D   V+D +L + +
Sbjct  105  VADESQVKQAVATIIEHFGR----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  RLSRAVLRGMMKARWGRIINITSVVgasgnag--qanyaaakagvagmaralaRELGSRN  179
             +S+AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNCVAPGFIDTDMTR-ILGEDQTAALLQQIPLGRLGAPADIAHAVAFLAGPQAGYITG  238
            I +N +APG+I+TD+T  ++ +++  A+++ IPLGRLGA+ D+A+A  FLA+  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  TTLHVNGGMYMQ  250
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

1134) fabG in NC_017223


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 174/252 (70%), Gaps = 14/252 (5%)

Query  8    LQGKIALVTGAT--RGIGRAIAQELaargatvvgtatSEAGAQAITEALAAQGGRGVVLD  65
            LQGKIA++TGA+  RGIGRA A  +A +GA VV     E++A+  + +L+ +G  G+  +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-EGHLGLAAN  104

Query  66   VTDA----QACEALIEQLGKDGGGPHILVNNAGITRDTLAMRMKDDDWSAVIDTNLAAVF  121
            V+D     QA  ++IE++G+     ++LVNNAGIT+   ++ ++ +D   V+D +L + +
Sbjct  105  VADESQVKQAVATIIEHFGR----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  RLSRAVLRGMMKARWGRIINITSVVgasgnag--qanyaaakagvagmaralaRELGSRN  179
             +S+AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNCVAPGFIDTDMTR-ILGEDQTAALLQQIPLGRLGAPADIAHAVAFLAGPQAGYITG  238
            I +N +APG+I+TD+T  ++ +++  A+++ IPLGRLGA+ D+A+A  FLA+  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  TTLHVNGGMYMQ  250
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

1135) fabG in NC_002929


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 174/252 (70%), Gaps = 14/252 (5%)

Query  8    LQGKIALVTGAT--RGIGRAIAQELaargatvvgtatSEAGAQAITEALAAQGGRGVVLD  65
            LQGKIA++TGA+  RGIGRA A  +A +GA VV     E++A+  + +L+ +G  G+  +
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLG-EGHLGLAAN  104

Query  66   VTDA----QACEALIEQLGKDGGGPHILVNNAGITRDTLAMRMKDDDWSAVIDTNLAAVF  121
            V+D     QA  ++IE++G+     ++LVNNAGIT+   ++ ++ +D   V+D +L + +
Sbjct  105  VADESQVKQAVATIIEHFGR----IDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTL  160

Query  122  RLSRAVLRGMMKARWGRIINITSVVgasgnag--qanyaaakagvagmaralaRELGSRN  179
             +S+AV+  M     G I+ ++SV +  G +    ++Y+AAKAGV G+++A+ARE+G+ +
Sbjct  161  LMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQ  220

Query  180  ITVNCVAPGFIDTDMTR-ILGEDQTAALLQQIPLGRLGAPADIAHAVAFLAGPQAGYITG  238
            I +N +APG+I+TD+T  ++ +++  A+++ IPLGRLGA+ D+A+A  FLA+  ++Y+TG
Sbjct  221  IRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  239  TTLHVNGGMYMQ  250
             TL+VNGGM ++
Sbjct  281  ITLDVNGGMLIH  292

1136) T1E_5677 in NC_018220


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.6 bits (332),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 131/211 (63%), Gaps = 21/211 (9%)

Query  56   AATLGEHSAGEVSALACDIADPASVEqaaaqvqaLHGRCDVLVNNASVLRPGALDTLSL-  114
            AATLGE   G    LA ++AD + V QA A +    GR DVLVNNA++ +P  + TL + 
Sbjct  91   AATLGEGHLG----LAANVADESQVKQAVATIIEHFGRIDVLVNNAGITQP--IKTLDIR  144

Query  115  -EQWNQVLAVNLSGYLLCAQAFGRSMLDCGQGRIVHVASIAAH-----YPQPNSGAYSAA  168
              + ++VL V+L G LL +QA   +M   G G IV ++S++A+     +  P+   YSAA
Sbjct  145  PGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPH---YSAA  201

Query  169  KAGVSMLSRQIAVEWGPRGVRSNAVCPGLIRTPLSAAFYADTQVERRRSAMTANQ--RIG  226
            KAGV  L++ +A E GP  +R N++ PGLI+T +++++  D   ERR++ + +    R+G
Sbjct  202  KAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITGGLMQD---ERRHAIIEGIPLGRLG  258

Query  227  EPQDIAEAVLFLASRRADYINGAELTVDGGL  257
             +QD+A+A LFLAS  + Y+ G  L V+GG+
Sbjct  259  AAQDVANAALFLASDLSSYLTGITLDVNGGM  289

1137) Snas_2912 in NC_013947


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 93/227 (41%), Positives = 153/227 (68%), Gaps = 12/227 (5%)

Query  23   AHDGLQVALLDLDETACADGVQRITDSGGRalavgadvadsgavtdavaRVAEELGPPTV  82
            A++G +V +LDLDE+A  D+   + ++    L+++A+VAD + V +AVA + E++G   V
Sbjct  71   AQHGARVVILDLDESAARDAAATLGEG---HLGLAANVADESQVKQAVATIIEHFGRIDV  127

Query  83   LVNNAGITRDNLLFKMSEDDWDSVIGVHLRGAFLMTRAVQEFMTQRRDGRIINLSSKSAL  142
            LVNNAGIT+    + +  +D D V++V LRG++LM++AV   M  +  G I+ +SS SA 
Sbjct  128  LVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAVIPTMRAQGSGSIVCMSSVSAQ  187

Query  143  ---GNRGQANYSAAKAGLQGFTKTLAIELGKFGITVNAIAPGFIATDMTAATARRLGMTT  199
               G  G ++YSAAKAG+ G+ K++A E+G   I +N+IAPG+I TD+T+      G+  
Sbjct  188  RGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRINSIAPGLIHTDITG------GLMQ  241

Query  200  EELHRAAAEQIPLGRVGTPEDIANTVSFLAGEGASFVSGQVIYVAGG  246
            +E ++A  E IPLGR+G+++D+AN+  FLA++ +S+++G  + V GG
Sbjct  242  DERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLDVNGG  288

1138) PT7_1693 in NC_015458


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 91.0 bits (326),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 100/245 (41%), Positives = 165/245 (68%), Gaps = 6/245 (2%)

Query  6    LEGKLALVTGAT--RGIGKAIALELaargatvvgtatsgagaQSITEMLGAAGGRGVVLN  63
            L+GK+A++TGA+  RGIG+A A+ +A +GA VV      ++A+  +  LG  G  G+  N
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE-GHLGLAAN  104

Query  64   VDDAAACESLVAELAKQDGGPHILVNNAGITRDNLAMRMKDDDWQAVIDTNLSAVFRLSR  123
            V D +     VA +  + G  ++LVNNAGIT+   ++ ++ +D + V+D +L + + +S+
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  124  AVTKSMMKARWGRIINITSVIGSSGNPg--qanyaaakagvagmaralaRELGSRNITVN  181
            AV  +M     G I+ ++SV +  G      ++Y+AAKAGV G+++A+ARE+G+ +I +N
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  182  CVAPGFIETDMTRAL-NEAQASAILAQIPLGRLGAANDIAHAVAFLAGPQAGYITGTTLH  240
             +APG+I+TD+T +L ++ +  AI+  IPLGRLGAA+D+A+A  FLA+  ++Y+TG TL+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITLD  284

Query  241  VNGGM  245
            VNGGM
Sbjct  285  VNGGM  289

1139) fabG in NC_017671


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 90.2 bits (323),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 163/246 (67%), Gaps = 8/246 (3%)

Query  5    LQGEIALVTGAS--RgigaaiadllaaqgaTVIGTATTESGAAAIGERLAAHGGH-GRAL  61
            LQG IA++TGA+  RGIG A A  +A +GA V+     ES+A   +  L+   GH G A 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLAA  103

Query  62   NVTDAAALDSVLDGIAKEFGPISILVNNAGITRDNLLMRMKDEDWASIIDTNLTSVFRTS  121
            NV+D + +   +  I  +FG I +LVNNAGIT+    + ++  D   ++D +L + +  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  122  KAVMRGMMKARKGRIINIASVVGVTgnag--qanyaaakagiigFSKSLAKEIGSRGVTV  179
            +AV+  M     G I+ ++SV +  G +    ++Y+AAKAG++G++K++A+E+G+  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NVVAPGFIDTDMTKAL-PEEARTALINDIALERLGSPEDIAHAVAFLASPAAGYITGETL  238
            N +APG+I+TD+T +L  +E R A+I++I+L RLG+++D+A+A  FLAS  ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGM  244
            +VNGGM
Sbjct  284  DVNGGM  289

1140) fabG in NC_010943


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 89.9 bits (322),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 163/246 (67%), Gaps = 8/246 (3%)

Query  5    LQGEIALVTGAS--RgigaaiadllaaqgaTVIGTATTESGAAAIGERLAAHGGH-GRAL  61
            LQG IA++TGA+  RGIG A A  +A +GA V+     ES+A   +  L+   GH G A 
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGE--GHLGLAA  103

Query  62   NVTDAAALDSVLDGIAKEFGPISILVNNAGITRDNLLMRMKDEDWASIIDTNLTSVFRTS  121
            NV+D + +   +  I  +FG I +LVNNAGIT+    + ++  D   ++D +L + +  S
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  122  KAVMRGMMKARKGRIINIASVVGVTgnag--qanyaaakagiigFSKSLAKEIGSRGVTV  179
            +AV+  M     G I+ ++SV +  G +    ++Y+AAKAG++G++K++A+E+G+  + +
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  180  NVVAPGFIDTDMTKAL-PEEARAALINDIALERLGSPEDIAHAVAFLASPAAGYITGETL  238
            N +APG+I+TD+T +L  +E R A+I++I+L RLG+++D+A+A  FLAS  ++Y+TG TL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  239  HVNGGM  244
            +VNGGM
Sbjct  284  DVNGGM  289

1141) Acid_7390 in NC_008536


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 89.1 bits (319),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 162/247 (66%), Gaps = 15/247 (6%)

Query  4    LSGKVALVTGSS--RGIGRAIALGMARAGADIVINYKARAAEARDTESEIAGLGrrvlav  61
            L GK+A++TG++  RGIGRA A+  A+ GA +VI      + ARD+    A LG   L++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVI-LDLDESAARDAA---ATLGEGHLGL  101

Query  62   qadvaraadverlvdavrTQLGPIDILVNNAGIARVQAIEETTERDWDELLAVNLKSCFL  121
             A+VA  ++V + V ++  ++G ID+LVNNAGI++     +    D D +L V+L++ +L
Sbjct  102  AANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLL  161

Query  122  VTQAVLPGMRARRWGRILNLssvaahvggvvgahy--aasKAGMLGLTHFYASRLAKEGI  179
            ++QAV+P MRA+  G I+ +SSV+A+ GG + +    +A+KAG+LGL    A  ++ + I
Sbjct  162  MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQI  221

Query  180  TVNAISPALIETE-----MVTANVNATAERIPIGRFGAVEEVADAAVMLARN--GYITGQ  232
             +N+I+P+LI+T+     M     +A  E IP+GR+GA ++VA+AA+ LA +  +Y+TG 
Sbjct  222  RINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGI  281

Query  233  TLHVNGG  239
            TL+VNGG
Sbjct  282  TLDVNGG  288

1142) SBI_04380 in NC_016582


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 88.9 bits (318),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 155/252 (62%), Gaps = 13/252 (5%)

Query  4    FEGYAVVLTGAG--RGIGEVTARRFAAEGARVLITDLdgeraakaaaairadggeaeSLA  61
            ++G   ++TGA+  RGIG  TA  FA +GARV+I DLD   A  AAA++  +     +LA
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHL---GLA  102

Query  62   CDVADRTAVEAAVAHAVDRFGALDVLVNNALSCTPDTPLFEDQLDDAWHQDLDITLTGAF  121
             +VAD + V  AVA  +++FG +DVLVNNA    P   L  D   +  ++ LD++L G++
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTL--DIRPGDYDKVLDVSLRGTL  160

Query  122  RCaraalphlaaaggrgaIVNVGSVNGERD---FGNHAYSAAKAGLASLTRTLAGHAAQR  178
                 A+     A G G+IV ++SV+++R+   FG   YSAAKAG+ +L +++A + +  
Sbjct  161  L-MSQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPD  219

Query  179  GVRVNLVAPGTIHTPNWDGREDALDRAARV--YPLGRVGEPADIAAAITFLASSDASWIT  236
             +R+N +APG IHT   +G  +   R A +   PLGR+G + D+A A  FLAS  +S +T
Sbjct  220  QIRINSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLT  279

Query  237  GVTLPVDGGLLM  248
            G+TL V+GG+L+
Sbjct  280  GITLDVNGGMLI  291

1143) BBR47_57630 in NC_012491


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 88.1 bits (315),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 106/258 (42%), Positives = 166/258 (65%), Gaps = 21/258 (8%)

Query  10   LQGKVALVTGAAS--GIGLATAKRLAQFGVNVMLLDINEELGEKAAQEIVAEGGSARYFT  67
            LQGK+A++TGAAS  GIG ATA  +AQ G  V++LD++E  + + A   ++EG  +  ++
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDES-AARDAAATLGEGHLG--LA  102

Query  68   CNVVSQQDCREVTQAIEEAYGRIDILFNNAGVIRRKTvveleeddwdlvvdvslKGAYNL  127
             NV  + + ++   +I E +GRID+L NNAG+ +    +++  +D D V+DVSL+G+  +
Sbjct  103  ANVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLM  162

Query  128  SKFVIPVMAKtgggsii--ntgsgwgikggdkaaaycaakagVVNLTRAMAIDHGPENIR  185
            S+ VIP M   G+GSI+  ++ S+    G   ++ Y AAKAGV+ L +AMA + GP++IR
Sbjct  163  SQAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIR  222

Query  186  VNCVSPG----DTDTPLLREEARQLEKDEGAFLASSAQGRPLERLGTPQDIANAVLFFAS  241
            +N ++PG    D    L+++E R+          +  +G PL RLG++QD+ANA LF+AS
Sbjct  223  INSIAPGLIHTDITGGLMQDERRH----------AIIEGIPLGRLGAAQDVANAALFLAS  272

Query  242  DLSSWVTGSVLVVDGGGL  259
            DLSS +TG  L V+GG L
Sbjct  273  DLSSYLTGITLDVNGGML  290

1144) XNR_2050 in NC_020990


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 86.5 bits (309),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 99/247 (41%), Positives = 152/247 (62%), Gaps = 14/247 (5%)

Query  9    ALVTGAG--QGIGEAVARRLAGEGARVLVTDRDGERARKVAAALCGEGGQARALVCDvad  66
            A++TGA+  +GIG A A  +A +GARV++ D D   AR  AA+L GEG  +  L  +VAD
Sbjct  51   AIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATL-GEGHLG--LAANVAD  107

Query  67   rtaveaavayavESFGGLDVLVNNACSAGQDTPLFEDGSDEVWERDLDITLTGAYRCara  126
             + V  AVA  +E FG +DVLVNNA  +     L  D      ++ LD++L G+     +
Sbjct  108  ESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTL--DIRPGDYDKVLDVSLRGTL--LMS  163

Query  127  alphlaaapDGRGAVVSIGSVNGEQD---FGGHAYSAAKAGLAGLTRTLAGHAGPRGVRV  183
                 +  ++G G++V ++SV+++++   FGG  YSAAKAG+ GL +++A + GP  +R+
Sbjct  164  QAVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRI  223

Query  184  NLVAPGTIATPAWAG--REASLEAAAGHYPLGRIGRPEDVAAAVAFLASRDAAWITGITL  241
            N +APG I T   +G  ++   +A     PLGR+G ++DVA A  FLAS  ++ +TGITL
Sbjct  224  NSIAPGLIHTDITGGLMQDERRHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  242  PVDGGIL  248
             V+GG+L
Sbjct  284  DVNGGML  290

1145) ebA309 in NC_006513


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 86.0 bits (307),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 129/208 (63%), Gaps = 25/208 (12%)

Query  64   DVSDERQWESALACAVEEFGGMDLLVNNAGIEQTGLLADVELADINKLLAVNVAGVILGH  123
            +V+DE Q   A+A  +E+FG +D+LVNNAGI Q     D+  +D +K+L V++ G +L  
Sbjct  104  NVADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMS  163

Query  124  KHAIRTMRPGGSAGKGGSIINLSSVAGLIGTPALGV--YSATKGAVRLLSKAAAVECGRL  181
            +  I TMR+ GS    GSI+ +SSV++  G   +G   YSA+K++V  L+KA A E    
Sbjct  164  QAVIPTMRAQGS----GSIVCMSSVSAQRGGGIFGGPHYSAAKAGVLGLGKAMARE----  215

Query  182  GYG---IRVNSIHPGLVDTDMGVKLVDDFVGLGVFADRETALRQMLETYPIGRTGVPGDI  238
             +G   IR+NSI PGL++TD+   L++D        +R  A+   +E  P+GR G + D+
Sbjct  216  -FGPDQIRINSIAPGLIHTDITGGLMQD--------ERRHAI---IEGIPLGRLGAAQDV  263

Query  239  AGTALFLASEQSSWITGTEIVVDGGMTI  266
            A +ALFLAS+ SS +TG  + V+GGM I
Sbjct  264  ANAALFLASDLSSYLTGITLDVNGGMLI  291

1146) CMN_00047 in NC_020891


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 83.4 bits (297),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 155/248 (63%), Gaps = 13/248 (5%)

Query  5    FDGKVVIITGAGS--GIGEATARRFVAEGAKVVITDSVEDKVRAVADSLPEGTatalvad  62
            ++GK+ IITGA+S  GIG ATA  F  +GA+VVI D  E   R  A +L EG   +L A+
Sbjct  46   LQGKIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEG-HLGLAAN  104

Query  63   aavsadadrvvaaaieaHGRLDVLVNNAGTFQAGPISGITDEEWHRVIDTDLSGVFYGTR  122
             A  ++  + VA+ IE  GR+DVLVNNAG  Q+    +I   + ++V+D  L G +  ++
Sbjct  105  VADESQVKQAVATIIEHFGRIDVLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQ  164

Query  123  AALPQL-VATRGSIVNVSSVS-----GMAADHHMSAYNAAKGGVSNLTRATALDHGVDGV  176
            A +P +     GSIV +SSVS     G+ ++ H   Y+AAK+GV  L +A A + G D +
Sbjct  165  AVIPTMRAQGSGSIVCMSSVSAQRGGGIFGGPH---YSAAKAGVLGLGKAMAREFGPDQI  221

Query  177  RVNAVAPGLIWTELVAGKEDDEELKAEFAKRISLGRGGEADEVaaaiaflasddasfITG  236
            R+N++APGLI T++ +G  +DE  +  +   I+LGR G A++VA A  FLASD +S++TG
Sbjct  222  RINSIAPGLIHTDITGGLMQDER-RHAIIEGIPLGRLGAAQDVANAALFLASDLSSYLTG  280

Query  237  AILPVDGG  244
              L V+GG
Sbjct  281  ITLDVNGG  288

1147) FraEuI1c_3085 in NC_014666


> AY597276|14|G14|51102967|AAT96115.1|Pseudomonas_viridiflava_RMX3.1b|+|12888..13766|-|-|putative 
short-chain type regulator
Length=292

 Score = 69.4 bits (244),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 100/246 (41%), Positives = 161/246 (66%), Gaps = 13/246 (5%)

Query  4    SVVIVTGAAS--GIGRAAAELYAERGYGVVGVDRYEAGL-ESLERPGEIA-TLVGDVAEE  59
             + I+TGAAS  GIGRA+A  +A++G  VV +D  E++  ++    GE    L ++VA+E
Sbjct  49   KIAIITGAASERGIGRATAVTFAQHGARVVILDLDESAARDAAATLGEGHLGLAANVADE  108

Query  60   KTNLAAVELAISRFGRLDAAVLNAGGGGTGPLES-DGSIERLDrvlavnvrgvalgvrav  118
                 AV   I +FGR+D  VL   +G T P+ + D      D+VL V++RG  L  +AV
Sbjct  109  SQVKQAVATIIEHFGRID--VLVNNAGITQPIKTLDIRPGDYDKVLDVSLRGTLLMSQAV  166

Query  119  vpalravgggSIVATSSISGLRGDSGGIWG---YNAAKAAVINLVRSLALDYAAENIRIN  175
            +P++RA G+GSIV  SS+S+ RG  GGI G   Y+AAKA+V+ L +++A ++++++IRIN
Sbjct  167  IPTMRAQGSGSIVCMSSVSAQRG--GGIFGGPHYSAAKAGVLGLGKAMAREFGPDQIRIN  224

Query  176  SIAPGSAITAMTaplladpvlaaaFNREVPLQRFSSAREQAEVIYFLTSSAASFVTGVTI  235
            SIAPG   T +T+ L+ D    A ++  +PL R+++A++ A+   FL+S  +S++TG+T+
Sbjct  225  SIAPGLIHTDITGGLMQDERRHAIIE-GIPLGRLGAAQDVANAALFLASDLSSYLTGITL  283

Query  236  PVDGGL  241
             V+GG+
Sbjct  284  DVNGGM  289