> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  770 bits (2913),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%)

Query  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60
            MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120
            YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180
            EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240
            AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300
            FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDsnnavffsan  360
            AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  361  aaLKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420
            AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480
            LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  481  LSLVGKLDRE  490
            LSLVGKLDRE
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  664 bits (2509),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 379/483 (79%), Positives = 448/483 (93%), Gaps = 0/483 (0%)

Query  2    SSDKVVDTPIIESIMEKSKYLKNDESYSIAKRGVAEFISAIVENDDVEDKINKFALDEMI  61
            +   + + +II+SIM+ S+Y K+DESY+IAK GV EFI+ IV  D  E+KINK++LDEMI
Sbjct  8    TQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMI  67

Query  62   AHIDDLVSKQMDEILHNEDFQKLESVWRGLYFLVERTDFNENIKINLFDVTKEEALEDFE  121
            AHIDD++S+QMDEILHNE++Q+LES WRGLYFLVERT+F+ENIKINLFDVTK+EALEDFE
Sbjct  68   AHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFE  127

Query  122  NNPDITQSVIYKNIYSSEYGQFGGEPVGAIIGDYQLSTNSPDMTFLNKMASIAAMSHSPF  181
             NPDIT + +YK IYSSEYGQFGGEPVGAI+GDY L++++PDM FL+KM+SIAAMSH+PF
Sbjct  128  ANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPF  187

Query  182  LTSCAPSFFGLENYSELANIQDLGGLLQGPQYTRWRTFRENEDSKYVGLMVTRFLTRSPY  241
            LTS +++FFGL+NY+EL++IQDL +LL+GPQY +WRTFRENEDSKY GL+VTRFLTRSPY
Sbjct  188  LTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPY  247

Query  242  SPEENPIKTFNYKENVHNSHNHLLWGNSAYAFATRLTESFAKYRWCGSIIGPKSGGSVKD  301
             P+ENPIK FNYKENVHNSHNHLLWGN+ YAFATRLT+SFA+YRWCG+IIGPK+GG+VKD
Sbjct  248  EPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKD  307

Query  302  LPTYLYESFGTMQSKIPTEVLITDRREYELAEAGFIALTLRRDsnnaaffsansaLKPKV  361
            LPTY+YESFGT QSKIPTEVLITDR EYELAE+GFIA+TLRRDSNNA FFSAN+ALKPK+
Sbjct  308  LPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKI  367

Query  362  FPNTPEGKEAETNYRLGTQLPYIFLISRLAHYLKVLQREEIGSWKERTDIENGLNEWVRQ  421
            FPNTPEGKEAETNYRLGTQLPYIFL+SRLAHYLKVLQREEIGSWKER+DIENGLNEW+RQ
Sbjct  368  FPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQ  427

Query  422  YISDQENPPAEVRSRRPFRGAQIKVDNVAGEPGWYKIGLSVRPHFKYMGGNFELSLVGKL  481
            Y+SDQENPPAEVRSRRPFRGA++ V ++ GE+GWY+I L+VRPHFK+MG+NFELSLVGKL
Sbjct  428  YVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKL  487

Query  482  DKE  484
            D+E
Sbjct  488  DRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  663 bits (2507),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 378/483 (79%), Positives = 447/483 (93%), Gaps = 0/483 (0%)

Query  2    SSDKVVDTPIIESIMEKSKYLKNDESYSIAKRGVAEFISAIVENDDVEDKINKFALDEMI  61
            +   + + +II+SIM+ S+Y K+DESY+IAK GV EFI+ IV  D  E+KINK++LDEMI
Sbjct  8    TQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMI  67

Query  62   AHIDDLVSKQMDEILHNEDFQKLESVWRGLYFLVERTDFNENIKINLFDVTKEEALEDFE  121
            AHIDD++S+QMDEILHNE++Q+LES WRGLYFLVERT+F+ENIKINLFDVTK+EALEDFE
Sbjct  68   AHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFE  127

Query  122  NNPDITQSVIYKNIYSSEYGQFGGEPVGAIIGDYQLSTNSPDMTFLNKMASIAAMSHSPF  181
             NPDIT + +YK IYSSEYGQFGGEPVGAI+GDY L++++PDM FL+KM+SIAAMSH+PF
Sbjct  128  ANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPF  187

Query  182  LTSCAPSFFGLENYSELANIQDLGGLLQGPQYTRWRTFRENEDSKYVGLMVTRFLTRSPY  241
            LTS +++FFGL+NY+EL++IQDL +LL+GPQY +WRTFRENEDSKY GL+VTRFLTRSPY
Sbjct  188  LTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPY  247

Query  242  SPEENPIKTFNYKENVHNSHNHLLWGNSAYAFATRLTESFAKYRWCGSIIGPKSGGSVKD  301
             P+ENPIK FNYKENVHNSHNHLLWGN+ YAFATRLT+SFA+YRWCG+IIGPK+GG+VKD
Sbjct  248  EPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKD  307

Query  302  LPTYLYESFGTMQSKIPTEVLITDRREYELAEAGFIALTLRRDsnnaaffsansaLKPKV  361
            LPTY+YESFGT QSKIPTEVLITDR EYELAE+GFIA+TLRRDSNNA FFSAN+ALKPK+
Sbjct  308  LPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKI  367

Query  362  FPNTPEGKEAETNYRLGTQLPYIFLISRLAHYLKVLQREEIGSWKERTDIENGLNEWVRQ  421
            FPNTPEGKEAETNYRLGTQLPYIFL+SRLAHYLKVLQREEIGSWKER+DIENGLNEW+RQ
Sbjct  368  FPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQ  427

Query  422  YISDQENPPAEVRSRRPFRGVQIKVDNVAGEPGWYKIGLSVRPHFKYMGGNFELSLVGKL  481
            Y+SDQENPPAEVRSRRPFRG ++ V ++ GE+GWY+I L+VRPHFK+MG+NFELSLVGKL
Sbjct  428  YVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKL  487

Query  482  DKE  484
            D+E
Sbjct  488  DRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  640 bits (2420),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 351/483 (73%), Positives = 437/483 (91%), Gaps = 2/483 (0%)

Query  2    SETKVKT-PIIESIMQRSKYTKDDESYSVVKQGVAEFISNVITTNNAEEKINKLALDEMI  60
            ++T +K  +II+SIMQ S+Y+K+DESY++ K GV EFI++++ T++AE+KINK +LDEMI
Sbjct  8    TQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMI  67

Query  61   AHIDTLLSAQMDEILHNKSFQELESTWRGIRFLVERTNFNENVKIDLLDATKEEILDDFE  120
            AHID ++S QMDEILHN  +Q+LESTWRG+ FLVERTNF+EN+KI+L+D TK+E L+DFE
Sbjct  68   AHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFE  127

Query  121  NNLDITQSTLYKQIYSAEYGQFGGEPVGAIVADYELDKSNQDMTFLNKMSSIAAMSHSPL  180
             N DIT +TLYK+IYS+EYGQFGGEPVGAI++DY L+ S  DM FL+KMSSIAAMSH+P+
Sbjct  128  ANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPF  187

Query  181  LTSLSSKFFGLDNFGELENIKDLKSLLEGPQYTRWRTFRENEDAKYTGCMVNRFLTRSPY  240
            LTS+S+ FFGLDN++EL +I+DLK+LLEGPQY +WRTFRENED+KY+G +V RFLTRSPY
Sbjct  188  LTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPY  247

Query  241  IPEDTPIKSFNYRESV-DKHDDMLWGNGAYAFATRLTESFADYRWCGNIIGPKGGGAVKD  299
             P++ PIK FNY+E+V + H+++LWGN  YAFATRLT+SFA+YRWCGNIIGPK+GGAVKD
Sbjct  248  EPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKD  307

Query  300  LPTYTYENYGSVQTKIPTEVLITDRREFELAENGFITLTLRRDSNNAAFFSANSVLKPKV  359
            LPTY YE++G+ Q+KIPTEVLITDR E+ELAE+GFI++TLRRDSNNA FFSAN+ LKPK+
Sbjct  308  LPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKI  367

Query  360  FPNTPEGKAAETNFRLGTQLPYVFLISRLAHYLKVLQREEIGTWKERSDVERGLNEWLRQ  419
            FPNTPEGK AETN+RLGTQLPY+FL+SRLAHYLKVLQREEIG+WKER+D+E GLNEW+RQ
Sbjct  368  FPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQ  427

Query  420  YISDQENPPADVRSRRPFRSAKVIVSDIAGEPGWYKIELLARPHFKFMGANFELSLVGKL  479
            Y+SDQENPPA+VRSRRPFR+AKV+VS+I GE+GWY+I+L  RPHFKFMGANFELSLVGKL
Sbjct  428  YVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKL  487

Query  480  DKE  482
            D+E
Sbjct  488  DRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  563 bits (2124),  Expect = 1e-161, Method: Compositional matrix adjust.
 Identities = 296/485 (62%), Positives = 411/485 (85%), Gaps = 0/485 (0%)

Query  9    SAASESVTEGSLLDQVMANSRMAPADEGYDVARKGVATFIANLLKSDEKGQPVNKALVDQ  68
            + +  S+ E S++D +M  SR +  DE+Y++A+ GV  FI++++K+D   + +NK  +D+
Sbjct  6    ANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDE  65

Query  69   MVVELDRKISAQMDEILHAPKLQELESSWRGLKLMVDRTDFRENIKVDILHATKTELLED  128
            M+ ++D  IS QMDEILH  ++Q+LES+WRGL ++V+RT+F+ENIK+++++ TK E LED
Sbjct  66   MIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALED  125

Query  129  FEFAPDVTQTGFYKHIYSTEYGQFGGEPVGAVVGNYAFTPSTPDMKLLQYVSSVGAMAHA  188
            FE  PD+T + +YK+IYS+EYGQFGGEPVGA++G+YA+ +STPDM++L  +SS++AM+HA
Sbjct  126  FEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHA  185

Query  189  PFLSSVAPSFFGVDSYQELPAIKELKAVFEGPKYAKWRSLRESEDARYLGLTSPRFLLRV  248
            PFL+S++++FFG+D+Y ELP I++LKA++EGP+Y KWR++RE+ED++Y GL   RFL R 
Sbjct  186  PFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRS  245

Query  249  PYDPTENPVRSFNYKEDVSGDHEHYLWGNTAYLLATRLTESFAKYRWCPNIIGPQSGGAV  308
            PY+P ENP++ FNYKE+V   H+H LWGNT Y +ATRLT+SFA+YRWC NIIGP++GGAV
Sbjct  246  PYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAV  305

Query  309  EDLPVHLFESFGQLEAKIPTEVLITDRREYEMADEGFIALTMRKGSDNAAFFSANSVQKP  368
             DLP  ++ESFG  ++KIPTEVLITDR EYE+A+ GFIA+T+R++S+NA FFSAN+  KP
Sbjct  306  KDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKP  365

Query  369  KQFPNTKEGKEAETNYKLGTQLPYMMIVNRLAHYIKVLQREQIGSWKERQDLERELNTWI  428
            K FPNT EGKEAETNY+LGTQLPY+ +V+RLAHY+KVLQRE+IGSWKER D+E  LN W+
Sbjct  366  KIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWM  425

Query  429  RQYVADQENPPAEVRSRRPLRAAQVTVSDVEGDPGWYQVSLAVRPHFKYMGANFELSLVG  488
            RQYV+DQENPPAEVRSRRP+R+A+V VS++EG++GWY+++L VRPHFK+MGANFELSLVG
Sbjct  426  RQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVG  485

Query  489  RLDKD  493
            +LD++
Sbjct  486  KLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  557 bits (2103),  Expect = 6e-160, Method: Compositional matrix adjust.
 Identities = 295/474 (63%), Positives = 404/474 (86%), Gaps = 0/474 (0%)

Query  20   LLDQVMANSRMAPADEGYDVARKGVATFIANLLKSDEKGQPVNKALVDQMVVELDRKISA  79
            ++D +M  SR +  DE+Y++A+ GV  FI++++K+D   + +NK  +D+M+ ++D  IS 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHAPKLQELESSWRGLKLMVDRTDFRENIKVDILHATKTELLEDFEFAPDVTQTG  139
            QMDEILH  ++Q+LES+WRGL ++V+RT+F+ENIK+++++ TK E LEDFE  PD+T + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHIYAAEYGQFGGEPVGAIVGNYAFSPSTPDMKLLQYVSSVGAMSHAPFLSSVAPSFF  199
            +YK+IY++EYGQFGGEPVGAI+G+YA+++STPDM++L  +SS++AMSHAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GVDSYQELPAIKELSAVFEGPKYAKWRSLRESEDARYLGLTAPRFLLRVPYDPTENPVRS  259
            G+D+Y ELP I++L A++EGP+Y KWR++RE+ED++Y GL   RFL R PY+P ENP++ 
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYKEDVSGDHEHYLWGNTSYLLATRLTESFAKYRWCPNIIGPQSGGAVEDLPVHTFESF  319
            FNYKE+V   H+H LWGNT Y +ATRLT+SFA+YRWC NIIGP++GGAV DLP   +ESF
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQLEAKIPTEVLITDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKQFPNTKEGKE  379
            G  ++KIPTEVLITDR EYELAE GFIA+T+R++S+NA FFSAN+  KPK FPNT EGKE
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMMIVNRLAHYIKVLQREQIGSWKERQDLERELNTWIRQYVADQENPP  439
            AETNY+LGTQLPY+ +V+RLAHY+KVLQRE+IGSWKER D+E  LN W+RQYV+DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  ADVRSRRPLRAAKVEVSDVEGDPGWYQVSLAVRPHFKYMGANFELSLVGRLDKD  493
            A+VRSRRP+R+AKV VS++EG++GWY+++L VRPHFK+MGANFELSLVG+LD++
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  557 bits (2103),  Expect = 6e-160, Method: Compositional matrix adjust.
 Identities = 295/474 (63%), Positives = 404/474 (86%), Gaps = 0/474 (0%)

Query  20   LLDQVMANSRMAPADEGYDVARKGVATFIANLLKSDEKGQPVNKALVDQMVVELDRKISA  79
            ++D +M  SR +  DE+Y++A+ GV  FI++++K+D   + +NK  +D+M+ ++D  IS 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHAPKLQELESSWRGLKLMVDRTDFRENIKVDILHATKTELLEDFEFAPDVTQTG  139
            QMDEILH  ++Q+LES+WRGL ++V+RT+F+ENIK+++++ TK E LEDFE  PD+T + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHIYAAEYGQFGGEPVGAIVGNYAFSPSTPDMKLLQYVSSVGAMSHAPFLSSVAPSFF  199
            +YK+IY++EYGQFGGEPVGAI+G+YA+++STPDM++L  +SS++AMSHAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GVDSYQELPAIKELSAVFEGPKYAKWRSLRESEDARYLGLTAPRFLLRVPYDPTENPVRS  259
            G+D+Y ELP I++L A++EGP+Y KWR++RE+ED++Y GL   RFL R PY+P ENP++ 
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYKEDVSGDHEHYLWGNTSYLLATRLTESFAKYRWCPNIIGPQSGGAVEDLPVHTFESF  319
            FNYKE+V   H+H LWGNT Y +ATRLT+SFA+YRWC NIIGP++GGAV DLP   +ESF
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQLEAKIPTEVLITDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKQFPNTKEGKE  379
            G  ++KIPTEVLITDR EYELAE GFIA+T+R++S+NA FFSAN+  KPK FPNT EGKE
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMMIVNRLAHYIKVLQREQIGSWKERQDLERELNTWIRQYVADQENPP  439
            AETNY+LGTQLPY+ +V+RLAHY+KVLQRE+IGSWKER D+E  LN W+RQYV+DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  ADVRSRRPLRAAKVEVSDVEGDPGWYQVSLAVRPHFKYMGANFELSLVGRLDKD  493
            A+VRSRRP+R+AKV VS++EG++GWY+++L VRPHFK+MGANFELSLVG+LD++
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  557 bits (2103),  Expect = 6e-160, Method: Compositional matrix adjust.
 Identities = 284/481 (60%), Positives = 412/481 (86%), Gaps = 0/481 (0%)

Query  12   QAEVSQMSLLDEIMAQTRIEPSEDGYDIAKKGIAAFIENLIGSKQTDEQVNKSLVDHMIV  71
            Q+ + ++S++D IM  +R    +++Y+IAK G+  FI +++ +  +++++NK  +D+MI 
Sbjct  9    QTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIA  68

Query  72   DLDNKISAQMDEILHNESVQTLESSWRGLKLLIDRTDFRENIKVEVLHATKQEMLDDFEF  131
            ++D+ IS QMDEILHNE +Q LES+WRGL +L++RT+F+ENIK+++++ TKQE L+DFE 
Sbjct  69   HIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEA  128

Query  132  AAETVQSGLYQHIYSSGYGQFGGEPVGAIIGNYAFTPSSPDIKLLQYIGAVAAMAHAPFI  191
             ++   + LY++IYSS YGQFGGEPVGAI+G+YA+ +S+PD+++L  ++++AAM+HAPF+
Sbjct  129  NPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFL  188

Query  192  SSVAPSFFGIDSFEELPNIKDLKSIFESPRYTKWRALRDSEDARYLGLTTPRFLLRVPYD  251
            +S++++FFG+D++ ELP+I+DLK+++E+P+Y KWR++R++ED++Y GL   RFL R PY+
Sbjct  189  TSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYE  248

Query  252  PIESPIRSFNYSENVSDSHDSYLWGNTAFSFGTRLTDSFANYRWCPNIIGPQSGGAVEDL  311
            P E+PI+ FNY ENV +SH+  LWGNT ++F+TRLTDSFANYRWC NIIGP++GGAV DL
Sbjct  249  PQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDL  308

Query  312  PVHMFESMGALQSKISTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVF  371
            P  ++ES G+ QSKI+TEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+F
Sbjct  309  PTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIF  368

Query  372  PNTKEGREAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNGWIKQY  431
            PNT EG+EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QY
Sbjct  369  PNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQY  428

Query  432  VADQENPPAEVRSRRPLRAAKIEVSDVEGDPGWYQVSLSVRPHFKYMGANFELSLVGRLD  491
            V+DQENPPAEVRSRRP+R+AK+ VS++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD
Sbjct  429  VSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLD  488

Query  492  K  492
            +
Sbjct  489  R  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  556 bits (2099),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 288/474 (61%), Positives = 407/474 (86%), Gaps = 0/474 (0%)

Query  19   NLLDEIMAQTKIAPNEEGYDVAKKGVAAFISNLLSSNQTDEPVNKNLVDQMLIELDRKIS  78
            +++D IM  ++ + ++E+Y++AK GV  FI++++ ++ +++ +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  79   AQMDEILHDESIQQMESAWRGLKLLVDRTDFRENNKIELIHVTKDELLEDFEFAPETTQS  138
             QMDEILH+E IQQ+ES+WRGL +LV+RT+F+EN KI+L++VTK+E LEDFE  P+ T +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  139  GLYKHVYSSGYGQFGGEPTGAIIGNYAFTPSSPDMKLLQYMASLGAMSHAPFISSVGPEF  198
             LYK++YSS YGQFGGEP GAI+G+YA+ +S+PDM++L  M+S++AMSHAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  199  FGVDSFEEMSNLKDLSSIFAGPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPIK  258
            FG+D++ E+++++DL +++ GP+Y KWR++RE+ED++Y GL   RFL R PY+P ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  259  SFNYEENVSQSHSHYLWGNTAYAFASKLTDSFSKYRWCPNIIGPQSGGAVEDLPVHVFES  318
             FNY ENV +SH+H LWGNT YAFA++LTDSF++YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  319  MGELQTKIPTEVLVTDRKEFELAEEGFIALTMRKGSDNAAFFSANSVQKPKIFPNTKEGK  378
             G  Q+KIPTEVL+TDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPKIFPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  379  EAETNYRLSTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  438
            EAETNYRL+TQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  439  PADVRSRRPLRGAKIEVSDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQ  492
            PA+VRSRRP+RGAK+ VS++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  555 bits (2096),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 291/492 (60%), Positives = 416/492 (85%), Gaps = 2/492 (0%)

Query  1    MPSNSSAKQKSVETSEHSILDSIIAQTSLTRDDEAYDIAKRGVSAFIEELLKPQNNGEPV  60
            M++ S+  Q S+   E SI+DSI+  +  +++DE+Y+IAK GV  FI E++K ++  + +
Sbjct  1    MSGASANTQTSI--KELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKI  58

Query  61   KKAMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVS  120
            +K  +D MIA+ID  +SRQMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI++++V+
Sbjct  59   NKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVT  118

Query  121  KDDLLEDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSS  180
            K++ LEDFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS
Sbjct  119  KQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSS  178

Query  181  VACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTV  240
            +A MSHAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y GL V
Sbjct  179  IAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLV  238

Query  241  PRFLLRNPYDPQENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIG  300
             RFL R+PY+PQENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA++RWC NIIG
Sbjct  239  TRFLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIG  298

Query  301  PQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFS  360
            P++GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFS
Sbjct  299  PKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFS  358

Query  361  ASSVQKPKFFGNSAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLE  420
            A++  KPK+F N++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E
Sbjct  359  ANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIE  418

Query  421  LELNKWIRQYVADQENPSAEVRGRRPLRAAQITVSDVEGEPGWYRVSLNVRPHFKYMGAD  480
              LN W+RQYV+DQENP+AEVR+RRP+R+A++ VS++EGE+GWYR++LNVRPHFK+MGA+
Sbjct  419  NGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGAN  478

Query  481  FTLSLVGKLDKE  492
            F LSLVGKLD+E
Sbjct  479  FELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  554 bits (2093),  Expect = 4e-159, Method: Compositional matrix adjust.
 Identities = 287/475 (61%), Positives = 409/475 (87%), Gaps = 0/475 (0%)

Query  19   NLLDEIMAQTRIAPNEEGYDVAKKGVAAFIENLLQSNKTEEPVNKTLVDQMLVELDRKIS  78
            +++D IM  +R + ++E+Y++AK GV  FI ++++++ +E+ +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  79   SQMNEILHDESFQQMESAWRGLKLLVDRTDFRENNKIELIHVTKSELLEDFEFAPETTQS  138
             QM+EILH+E +QQ+ES+WRGL +LV+RT+F+EN KI+L++VTK E LEDFE  P+ T +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  139  GLYKHVYSSGYGQFGGEPTGAIIGNYAFTPSSSDMKLLQYMGALGAMSHAPFISSVGPEF  198
             LYK++YSS YGQFGGEP GAI+G+YA+ +S++DM++L  M++++AMSHAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  199  FGIESFEELPNLKDLNSIFEGPKYAKWRTLRESEDARYIGLTAPRFLLRVPYDPIENPIK  258
            FG++++ ELP+++DL++++EGP+Y KWRT+RE+ED++Y GL   RFL R PY+P ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  259  SFNYQEDVSKSHSDYLWGNTAFAFASRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  318
             FNY+E+V +SH++ LWGNT +AFA+RLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  319  MGELQAKIPTEVLVTDRKEFELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFPNTKDGK  378
             G  Q+KIPTEVL+TDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT +GK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  379  EAETNYRLSTQLPYMMIVNRLAHYVKVLQREQIGAWKERGDLERELNGWIKQYVADQENP  438
            EAETNYRL+TQLPY+ +V+RLAHY+KVLQRE+IG+WKER+D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  439  PADVRSRRPLRGAKIEVSDVEGNPGWYQVSLAVRPHFKYMGANFELSLVGRLDQA  493
            PA+VRSRRP+RGAK+ VS++EG++GWY+++L VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  552 bits (2084),  Expect = 2e-158, Method: Compositional matrix adjust.
 Identities = 290/475 (62%), Positives = 405/475 (86%), Gaps = 0/475 (0%)

Query  18   SLLDEIMAQTRIAPTEEGYDVAKKGVAAFIENLIGSNQTEEPVNKSLVDQMLVELDKKIS  77
            S++D IM  +R +  +E+Y++AK GV  FI +++ ++ +E+ +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHEERFQQMESSWRGLKLFIDRTDFRENNKVDLLHVTKGELLEDFEFAPETTQS  137
             QMDEILH+E++QQ+ES+WRGL ++++RT+F+EN K++L++VTK E LEDFE  P+ T +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSSGYGQFGGEPTGAIIGNFAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  197
             LYK++YSS YGQFGGEP GAI+G++A+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPTENPIK  257
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYVESVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  317
             FNY E+V  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGALQSKIPTEVLVTDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKIFPNTKEGK  377
             G+ QSKIPTEVL+TDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPKIFPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNGWIKQYVADQENP  437
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAAKIEVMDVEGEPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  492
            PA+VRSRRP+R+AK+ V ++EGE+GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  552 bits (2084),  Expect = 2e-158, Method: Compositional matrix adjust.
 Identities = 290/475 (62%), Positives = 405/475 (86%), Gaps = 0/475 (0%)

Query  18   SLLDEIMAQTRIAPTEEGYDVAKKGVAAFIENLIGSNQTEEPVNKSLVDQMLVELDKKIS  77
            S++D IM  +R +  +E+Y++AK GV  FI +++ ++ +E+ +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHEERFQQMESSWRGLKLFIDRTDFRENNKVDLLHVTKGELLEDFEFAPETTQS  137
             QMDEILH+E++QQ+ES+WRGL ++++RT+F+EN K++L++VTK E LEDFE  P+ T +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSSGYGQFGGEPTGAIIGNFAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  197
             LYK++YSS YGQFGGEP GAI+G++A+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPTENPIK  257
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYVESVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  317
             FNY E+V  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGALQSKIPTEVLVTDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKIFPNTKEGK  377
             G+ QSKIPTEVL+TDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPKIFPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNGWIKQYVADQENP  437
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAAKIEVMDVEGEPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  492
            PA+VRSRRP+R+AK+ V ++EGE+GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  552 bits (2084),  Expect = 2e-158, Method: Compositional matrix adjust.
 Identities = 288/489 (59%), Positives = 414/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQNAAENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVKKA  62
            ++A+ +  +   E SI+DSI+  +R + +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSKED  122
             +D MIA+ID  +SRQMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI++++V+K++
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVPRF  242
            MSHAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR +EDS+Y GL V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRNPYDPEENPVKSFVYKENVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKENV NSH+H LWGNT YAF+T+LTDSFA++RWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+V+VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  551 bits (2081),  Expect = 3e-158, Method: Compositional matrix adjust.
 Identities = 282/477 (60%), Positives = 412/477 (87%), Gaps = 0/477 (0%)

Query  19   DVSLLDQVMAKTRMAPADEGYDVAKQGVAAFISELLKSDDGQQQVNKSVVDRMIVELDRK  78
            ++S++D +M  +R +  DE+Y++AK GV  FI+E++K+D +++++NK  +D MI ++D  
Sbjct  14   ELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDI  73

Query  79   IGHQVDEILHDQEFQHLESAWRGLKLLVDRTDFRENIKLNVLHATKEELLEDFEFASEIS  138
            I++Q+DEILH++++Q+LES+WRGL +LV+RT+F+ENIK+N+++ TK+E LEDFE  ++I+
Sbjct  74   ISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDIT  133

Query  139  QSGLYQHVYAAEYGQFGGEPVAAMIGHYDFTPSGPDIKLLQYAASVGAMSHAPFLSSVAP  198
             + LY+++Y++EYGQFGGEPV+A++G+Y + +S PD+++L   +S++AMSHAPFL+S+++
Sbjct  134  TATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSA  193

Query  199  SFFGIDSFEELPNIKDFKAIFEGPKYARWRNLRESEDARYLGLTAPRFLLRTPYDPVENP  258
            +FFG+D++ ELP+I+D+KA++EGP+Y +WR +RE+ED++Y GL   RFL R+PY+P ENP
Sbjct  194  GFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENP  253

Query  259  VKSFHYQESVSESHDDYLWGNTAYLLAERLNDSFAKYRWCPNIIGPQSGGAVENLPMHTY  318
            +K F+Y+E+V +SH++ LWGNT Y +A RL DSFA+YRWC NIIGP++GGAV +LP   Y
Sbjct  254  IKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIY  313

Query  319  EALGQVQNKIPTEVLITDRREFEMAEEGFISLTMRKGSDNAAFFSANSVQKPKSFPNTPE  378
            E++G  Q+KIPTEVLITDR E+E+AE GFI++T+R++S+NA FFSAN+  KPK FPNTPE
Sbjct  314  ESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPE  373

Query  379  GREAETNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERQDLERELNTWIRQYVADQE  438
            G+EAETNY+LGTQLPY+F+V+RLAHY+KVLQRE+IGSWKER D+E  LN W+RQYV+DQE
Sbjct  374  GKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQE  433

Query  439  NPPADVRSRRPLRAASVQVSDVEGDPGWYQVSLAVRPHFKYMGANFELSLVGRLDKD  495
            NPPA+VRSRRP+R+A V VS++EG++GWY+++L VRPHFK+MGANFELSLVG+LD++
Sbjct  434  NPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 281/475 (60%), Positives = 408/475 (86%), Gaps = 0/475 (0%)

Query  17   SILESIIAQTRLTPDDDAYDIAKRGVSAFIEELLKPQNSGEPVKKAMVDRMIAEIDAKLS  76
            SI++SI+  +R + +D++Y+IAK GV  FI E++K +++ + ++K  +D MIA+ID  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  77   RQVDEILHHPQFQALESAWRGLQLLVDRTNFRENIKIEMLNVSKDDLLDDFEDSPEVMQS  136
            RQ+DEILH+ Q+Q LES+WRGL +LV+RTNF+ENIKI++++V+K++ L+DFE +P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  137  GLYKHIYTAEYGQFGGQPVGAVIANYFMSPSSPDVKLMQYVSSVACMSHAPFIAAAGPKF  196
             LYK+IY++EYGQFGG+PVGA++++Y +++S+PD++++  +SS+A MSHAPF+++ ++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  197  FGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYFGLTVPRFLLRNPYDPQENPVK  256
            FGL++++ LP ++DLK  +EGPQ+ KW++FR++ED++Y GL V RFL R+PY+PQENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  257  SFVYKETVANSHEHYLWGNTAYAFGTRLTDSFAKFRWCPNIVGPQSGGAVEDLPLHHFES  316
             F YKE V NSH+H LWGNT YAF+TRLTDSFA++RWC NI+GP++GGAV DLP   +ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  317  MGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGNGAEDK  376
             G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++  KPK+F N +E+K
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  377  HAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLERELNNWIRQYVADQENP  436
            +AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  LN+W+RQYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  437  SAEVRGRRPLRAAKIIVSDVEGEPGWYRVGLNVRPHFKYMGADFTLSLVGKLDKA  491
            +AEVR+RRP+R+AK++VS++EGE+GWYR+ LNVRPHFK+MGA+F LSLVGKLD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 285/489 (59%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKKA  62
            ++A+ + +    E +I+DSI+  +R S +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIKIEILSVSKQD  122
             +D MIA+ID  +S QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI+++ V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTKLTDSFAKYRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA+YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 285/489 (59%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKKA  62
            ++A+ + +    E +I+DSI+  +R S +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIKIEILSVSKQD  122
             +D MIA+ID  +S QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI+++ V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTKLTDSFAKYRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA+YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 285/489 (59%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKKA  62
            ++A+ + +    E +I+DSI+  +R S +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIKIEILSVSKQD  122
             +D MIA+ID  +S QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI+++ V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTKLTDSFAKYRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA+YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 285/489 (59%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKKA  62
            ++A+ + +    E +I+DSI+  +R S +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIKIEILSVSKQD  122
             +D MIA+ID  +S QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI+++ V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTKLTDSFAKYRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA+YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 285/489 (59%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKKA  62
            ++A+ + +    E +I+DSI+  +R S +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIKIEILSVSKQD  122
             +D MIA+ID  +S QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI+++ V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTKLTDSFAKYRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA+YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 285/489 (59%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKKA  62
            ++A+ + +    E +I+DSI+  +R S +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIKIEILSVSKQD  122
             +D MIA+ID  +S QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI+++ V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTKLTDSFAKYRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA+YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 285/489 (59%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKKA  62
            ++A+ + +    E +I+DSI+  +R S +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIKIEILSVSKQD  122
             +D MIA+ID  +S QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI+++ V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTKLTDSFAKYRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA+YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  550 bits (2076),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 285/489 (59%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKKA  62
            ++A+ + +    E +I+DSI+  +R S +DE+Y+IAK GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIKIEILSVSKQD  122
             +D MIA+ID  +S QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIKI+++ V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTKLTDSFAKYRWCPNIIGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA+YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2073),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 288/475 (61%), Positives = 404/475 (86%), Gaps = 0/475 (0%)

Query  18   SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS  77
            S++D IM  +R +  +E+Y+IAK GV  FI +++ ++ + + +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS  137
             QMDEILHN Q+Q +ES+WRGL ++V+RT+F+EN K+++++VTK+E LEDFE  P+ + +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  197
             LYK++YS+ YGQFGGEPVGAI+G+YA+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVK  257
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  317
             FNY ENV  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGK  377
             G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  437
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  492
            PA+VRSRRP+R+A++ V ++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2073),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 288/475 (61%), Positives = 404/475 (86%), Gaps = 0/475 (0%)

Query  18   SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS  77
            S++D IM  +R +  +E+Y+IAK GV  FI +++ ++ + + +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS  137
             QMDEILHN Q+Q +ES+WRGL ++V+RT+F+EN K+++++VTK+E LEDFE  P+ + +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  197
             LYK++YS+ YGQFGGEPVGAI+G+YA+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVK  257
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  317
             FNY ENV  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGK  377
             G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  437
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  492
            PA+VRSRRP+R+A++ V ++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2073),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 288/475 (61%), Positives = 404/475 (86%), Gaps = 0/475 (0%)

Query  18   SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS  77
            S++D IM  +R +  +E+Y+IAK GV  FI +++ ++ + + +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS  137
             QMDEILHN Q+Q +ES+WRGL ++V+RT+F+EN K+++++VTK+E LEDFE  P+ + +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  197
             LYK++YS+ YGQFGGEPVGAI+G+YA+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVK  257
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  317
             FNY ENV  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGK  377
             G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  437
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  492
            PA+VRSRRP+R+A++ V ++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2073),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 288/475 (61%), Positives = 404/475 (86%), Gaps = 0/475 (0%)

Query  18   SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS  77
            S++D IM  +R +  +E+Y+IAK GV  FI +++ ++ + + +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS  137
             QMDEILHN Q+Q +ES+WRGL ++V+RT+F+EN K+++++VTK+E LEDFE  P+ + +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  197
             LYK++YS+ YGQFGGEPVGAI+G+YA+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVK  257
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  317
             FNY ENV  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGK  377
             G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  437
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  492
            PA+VRSRRP+R+A++ V ++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2073),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 288/475 (61%), Positives = 404/475 (86%), Gaps = 0/475 (0%)

Query  18   SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS  77
            S++D IM  +R +  +E+Y+IAK GV  FI +++ ++ + + +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS  137
             QMDEILHN Q+Q +ES+WRGL ++V+RT+F+EN K+++++VTK+E LEDFE  P+ + +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  197
             LYK++YS+ YGQFGGEPVGAI+G+YA+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVK  257
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  317
             FNY ENV  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGK  377
             G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  437
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  492
            PA+VRSRRP+R+A++ V ++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2073),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 288/475 (61%), Positives = 404/475 (86%), Gaps = 0/475 (0%)

Query  18   SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS  77
            S++D IM  +R +  +E+Y+IAK GV  FI +++ ++ + + +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS  137
             QMDEILHN Q+Q +ES+WRGL ++V+RT+F+EN K+++++VTK+E LEDFE  P+ + +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  197
             LYK++YS+ YGQFGGEPVGAI+G+YA+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVK  257
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  317
             FNY ENV  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGK  377
             G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  437
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  492
            PA+VRSRRP+R+A++ V ++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2074),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 291/482 (61%), Positives = 406/482 (85%), Gaps = 0/482 (0%)

Query  10   RPQLAEGSLLDEIMAQTRIAPSEEGYDVAKKGVAAFIENLIGGNQLDEAVNKSLVDQMLV  69
            +  + E S++D IM  +R +  +E+Y++AK GV  FI +++  +  ++ +NK  +D+M+ 
Sbjct  9    QTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIA  68

Query  70   ELDKKISAQMDEILHDQQYQQMESAWRGLKLFVDRTDFRENNKVELLHVTKEELLEDFEF  129
            ++D  IS QMDEILH++Q QQ+ES+WRGL ++V+RT+F+EN K++L++VTK+E LEDFE 
Sbjct  69   HIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEA  128

Query  130  APDTTQSGLYKHVYSSGYGQFGGEPTGAIVGNFAFTPSTPDMKLLQYMGALGAMAHAPFI  189
             PD T + LYK++YSS YGQFGGEP GAI+G++A+ +STPDM++L  M++++AM+HAPF+
Sbjct  129  NPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFL  188

Query  190  SSVGPQFFGIDSFEELPNIKDIKSTFESPKYTKWRALRESEDARYIGLTAPRFLLRVPYD  249
            +S+++ FFG+D++ ELP+I+D+K+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+
Sbjct  189  TSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYE  248

Query  250  PTENPIKSFNYSENVSQSHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDL  309
            P ENPIK FNY ENV +SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DL
Sbjct  249  PQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDL  308

Query  310  PVHVFESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKAKIF  369
            P  ++ES G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  K+KIF
Sbjct  309  PTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIF  368

Query  370  PNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQY  429
            PNT EGKEAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QY
Sbjct  369  PNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQY  428

Query  430  VADQENPPADVRSRRPLRAAKIEVMDVEGNPGWYQVSLAVRPHFKYMGANFELSLVGRLD  489
            V+DQENPPA+VRSRRP+R+AK+ V ++EG++GWY+++L VRPHFK+MGANFELSLVG+LD
Sbjct  429  VSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLD  488

Query  490  QA  491
            + 
Sbjct  489  RE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2073),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 279/474 (59%), Positives = 405/474 (86%), Gaps = 1/474 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFIGELLSSSTVE-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI E++ + + E K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHNEEIQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILHNE+IQ +ESTWRGL +LV++T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDYQLSASSPDIKLMEYMGNVGAMSHAPFITSASSQF  197
             LYK+IY+ EYGQFGG PVGA++ DY L+AS+PD++++  M++++AMSHAPF+TS S+ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYTKWRGFREHEDARYVGLCTSRFMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR FRE+ED++Y GL  +RF+ R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYDEMVTDSHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGAVNDLPVYNFEA  317
             F+Y E V +SH++ LWGN+ YA A+++++SFA+YRWC NIIGP++GGAV+DLP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILVSDRREYELAEEGFMALTMRKGSDNAAFFSANSVQKPKVFANTPEGK  377
             G  ++KIPTE+L++DR EYELAE GF+A+T+R++S+NA FFSAN+  KPK+F+NTPEGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEVELNKWIRQYVSDQENP  437
            +AE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQ  491
            PAEVR+RRP+R+AKV VS++EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2072),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 288/475 (61%), Positives = 404/475 (86%), Gaps = 0/475 (0%)

Query  17   SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS  76
            S++D IM  +R +  +E+Y+IAK GV  FI +++ ++ + + +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  77   AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS  136
             QMDEILHN Q+Q +ES+WRGL ++V+RT+F+EN K+++++VTK+E LEDFE  P+ + +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  137  GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  196
             LYK++YS+ YGQFGGEPVGAI+G+YA+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  197  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVK  256
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  257  SFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  316
             FNY ENV  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  317  MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGK  376
             G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  377  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  436
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  437  PADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  491
            PA+VRSRRP+R+A++ V ++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  549 bits (2072),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 288/475 (61%), Positives = 404/475 (86%), Gaps = 0/475 (0%)

Query  17   SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS  76
            S++D IM  +R +  +E+Y+IAK GV  FI +++ ++ + + +NK  +D+M+ ++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  77   AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS  136
             QMDEILHN Q+Q +ES+WRGL ++V+RT+F+EN K+++++VTK+E LEDFE  P+ + +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  137  GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF  196
             LYK++YS+ YGQFGGEPVGAI+G+YA+ +STPDM++L  M++++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  197  FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVK  256
            FG+D++ ELP+I+DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL R PY+P ENP+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  257  SFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFES  316
             FNY ENV  SH+H LWGNT +AFATRLTDSFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  317  MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGK  376
             G+ QSKIPTEVLITDR E+ELAE GFIA+T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  377  EAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQENP  436
            EAETNY+LGTQLPY+ +++RLAHY+KVLQRE+IG+WKER D+E  LN W++QYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  437  PADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA  491
            PA+VRSRRP+R+A++ V ++EG++GWY+++L+VRPHFK+MGANFELSLVG+LD+ 
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  548 bits (2068),  Expect = 3e-157, Method: Compositional matrix adjust.
 Identities = 281/489 (58%), Positives = 411/489 (85%), Gaps = 0/489 (0%)

Query  3    TNAAQQNRNENGEYNILDSIIAETRLSPDDEAYDIARRGVSAFIEELLKPQNEGEPVKKA  62
            + A+ + +    E +I+DSI+  +R S +DE+Y+IA+ GV  FI E++K ++  + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   MVDRMIAEIDAKLGSQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIRIEILSVSKED  122
             +D MIA+ID  ++ QMDEILH+ ++Q LES+WRGL +LV+RTNF+ENI+I+++ V+K++
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYLSPSSPDVKLMQYVSSVAC  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y L++S+PD++++  +SS+A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVPRF  242
            M+HAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FR++EDS+Y +L V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTRLTDSFAKYRWCPNIVGPQS  302
            L R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+TRLTDSFA+YRWC NI+GP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREFELAEEGFISLTMRKGSDNAAFFSASS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR E+ELAE GFI++T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR++LNVRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  547 bits (2066),  Expect = 4e-157, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 409/474 (87%), Gaps = 1/474 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTE-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI+E++ + ++E K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHNEEVQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILHNE++Q +ESTWRGL +LV++T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDYAMSASSPDIKLMEYMANVGAMSHAPFITSASAKF  197
             LYK+IY+ EYGQFGG PVGA++ DYA++AS+PD++++  M++++AMSHAPF+TS SA F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCTSRFMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR +RE+ED++Y GL  +RF+ R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYDEQVTDSHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGTVQDLPVYNFEA  317
             F+Y E+V +SH++ LWGN+ YA A+++++SFA+YRWC NIIGP++GG+V+DLP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGK  377
             G  ++KIPTE+L++DR EYELAE GFIA+T+R++S+NA FFSAN+  KPK+F+NTPEGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENP  437
            +AE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQ  491
            PAEVR+RRP+R+AKV VS++EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  547 bits (2066),  Expect = 5e-157, Method: Compositional matrix adjust.
 Identities = 284/473 (61%), Positives = 407/473 (87%), Gaps = 0/473 (0%)

Query  18   SLLDQVMEQTRFKPENEDYTIAQRGIAEFISEMLKTDNTDAVVNKTLIDEMIVRLDEKIG  77
            S++D +M+ +R+  E+E Y IA+ G+ EFI+E++KTD+++  +NK  +DEMI ++D+ I+
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   HQVDEILHNQKLQEIESAWRGLKLLVDRTDFRENIKIEVLNVTKEELLDDFEYATDITQS  137
            +Q+DEILHN+++Q++ES+WRGL +LV+RT+F+ENIKI++++VTK+E L+DFE   DIT +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSANYGQFGGEPVAAIVGNYTFTPAAPDIKLLQYVSSVGAMSHAPFISAAGPEF  197
             LYK++YS++YGQFGGEPV+AI+G+Y++ +++PD+++L  +SS++AMSHAPF+++ ++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYASLSEIKEVKDIFEGPRYAKWRALRESEDSKYLALTMPRFLSRLPYDPIENPTK  257
            FGLD+YA L+ I+++K ++EGP+Y KWR++RE+EDSKY +L + RFL+R PY+P ENP K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  RFNYQETIAGEHNNYLWSNVAFLMASKVTESFAKYRWCPNIIGPQSGGAVEDLPVHLFES  317
            +FNY+E +   HN+ LW+N  +  A+++T+SFA+YRWC NIIGP++GGAV DLP  ++ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  FGQLQAKIPTEVLITDRKEFELADEGFIPLTMRKGSDNAAFFSANSVQKPKKFPNTEEGK  377
            FG  Q+KIPTEVLITDR E+ELA+ GFI++T+R++S+NA FFSAN+  KPK FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  LAETNYKLGTQLPYMFIVNRLAHYLKVLQREQIGSWKERQDLERELNVWLKQYVSDQENP  437
             AETNY+LGTQLPY+F+V+RLAHYLKVLQRE+IGSWKER D+E  LN W++QYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRSRRPLRAAKVEVSSVAGEPGWYKVSLSVRPHFKYMGASFDLSLVGRLD  490
            PAEVRSRRP+R+AKV VS + GE+GWY+++L+VRPHFK+MGA+F+LSLVG+LD
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLD  488

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  547 bits (2065),  Expect = 6e-157, Method: Compositional matrix adjust.
 Identities = 282/489 (58%), Positives = 412/489 (85%), Gaps = 0/489 (0%)

Query  3    TSAVQETTGAGVEYGILDRIIAETSLTPDDEAYGIAKRGVSAFIEELLKPQNQGEQVKKA  62
            ++A  +T  +  E +I+D I+  +  + +DE+Y IAK GV  FI E++K ++  ++++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   LVDRMIAEIDAKLSQQMDEILHHAEFQALESSWRGLKLLIDRTNFRENIKVEILNVSKQD  122
             +D MIA+ID  +S+QMDEILH+ ++Q LES+WRGL +L++RTNF+ENIK+++++V+KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVVQSGLYKHIYTAEYGQFGGQPVGAIVANYYFSPSAPDVKTMQYVASVSS  182
             L+DFE +P++  + LYK+IY++EYGQFGG+PVGAI+++Y +++S+PD++ +  ++S+++
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  MSHAPFISAAGPKFFGLDSFTGLPDLKDLKDHFEGPQFAKWQSFREQEDSRYVGLTVPRF  242
            MSHAPF+++ ++ FFGLD+++ LP ++DLK  +EGPQ+ KW++FRE+EDS+Y GL V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRNPYDPEDNPVKTFVYKENVANDHEHYLWGNTAFTFASKLTDSFAKFRWCPNIIGPQS  302
            L R+PY+P++NP+K F YKENV N H+H LWGNT ++FA++LTDSFA++RWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSANS  362
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFI++T+R++S+NA FFSAN+
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKFFGISEEGKTAELNYKLGTQLPYLFIVNRLAHYLKVLQREQIGAWKERTDLELEL  422
              KPK+F  + EGK AE NY+LGTQLPY+F+V+RLAHYLKVLQRE+IG+WKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRSRRPLRAAQVIVSDVEGEPGWYRVSLSVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVRSRRP+R+A+V+VS++EGE+GWYR++L+VRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  547 bits (2065),  Expect = 6e-157, Method: Compositional matrix adjust.
 Identities = 282/487 (58%), Positives = 409/487 (84%), Gaps = 0/487 (0%)

Query  5    ETAQESSQVLNGNLLDEILAQTKITPIDEGYDVAKKGVAAFISNILETESNSEPINKALV  64
             +A+  + + + +++D I+  ++ +  DE+Y++AK GV  FI++I+ T+S  + INK  +
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  65   DKMLVELDKKISSQMDQILHDESVQQMESSWRNLKLLVDRTDFRENIKIEVLHVTKSELL  124
            D M+ ++D  IS QMD+ILH+E +QQ+ES+WR L +LV+RT+F+ENIKI++++VTK E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  125  DDFEFAPETVQSGLYKHVYSSGYGQFGGEPIGAIVGNYAFTPSSQDMKLLQYVSAVGAMA  184
            +DFE  P+   + LYK++YSS YGQFGGEP+GAI+G+YA+ +S+ DM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  185  HAPFLSSVGPEFFGIDSFEELPNLKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLL  244
            HAPFL+S+++ FFG+D++ ELP+++DLK+ +E+P+Y KWR++RE+ED++Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  245  RVPYDPIDNPIGSFNYRESVHASHEDYLWGNTAFALATRLTESFAKYRWCPNIIGPQSGG  304
            R PY+P +NPI  FNY+E+VH SH++ LWGNT +A+ATRLT+SFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  305  AVDDLPVHVFESMGALQSKIPTEVLITDRKEFELADEGFISLTMRKGSDNAAFFSANSIQ  364
            AV DLP  ++ES G+ QSKIPTEVLITDR E+ELA+ GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  365  KPKVFPNTKEGKEAETNYKLGTQIPYMMIINRLAHYIKVLQREQIGSWKERQDLERELNS  424
            KPK+FPNT EGKEAETNY+LGTQ+PY+ +++RLAHY+KVLQRE+IGSWKER D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIKQFVADQENPPADVRSRRPLRAAKVEVMDVQGDPGWYQVSMAVRPHFKYMGANFELSL  484
            W++Q+V+DQENPPA+VRSRRP+R+AKV V +++G++GWY++++ VRPHFK+MGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDQE  491
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  547 bits (2064),  Expect = 7e-157, Method: Compositional matrix adjust.
 Identities = 277/474 (59%), Positives = 408/474 (87%), Gaps = 1/474 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTE-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI+E++ + ++E K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHNEEVQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILHNE++Q +ESTWRGL +LV++T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDYDMSASSPDIKLMEYMANVGAMSHAPFITSASAKF  197
             LYK+IY+ EYGQFGG PVGA++ DY ++AS+PD++++  M++++AMSHAPF+TS SA F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYTKWRSLREHEDARYLGLCTSRFMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR++RE+ED++Y GL  +RF+ R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYDEQVTDSHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGTVHDLPVYNFEA  317
             F+Y E+V +SH++ LWGN+ YA A+++++SFA+YRWC NIIGP++GG+V DLP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGK  377
             G  ++KIPTE+L++DR EYELAE GFIA+T+R++S+NA FFSAN+  KPK+F+NTPEGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENP  437
            +AE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQ  491
            PAEVR+RRP+R+AKV VS++EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  547 bits (2063),  Expect = 8e-157, Method: Compositional matrix adjust.
 Identities = 277/475 (59%), Positives = 407/475 (86%), Gaps = 1/475 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFIGELLSTNTSD-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI E++ T++++ K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHNEEVQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILHNE++Q +ESTWRGL +LV++T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDFQMSASSPDIKLMEYMANVGAMSHAPFITSASAKF  197
             LYK+IY+ EYGQFGG PVGA++ D+ ++AS+PD++++  M++++AMSHAPF+TS SA F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYTKWRGFREHEDARYVGLCTSRMMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR FRE+ED++Y GL  +R + R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYNEHVKDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGTVSDLPVYNYES  317
             F+Y+E+V ++H++ LWGN+ YA A+++++SFA+YRWC NIIGP++GG+V DLP Y YES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILISDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKAKVFPNTPEGQ  377
             G  ++KIPTE+LI+DR EYELAE GFIA+T+R++S+NA FFSAN+  K+K+FPNTPEG+
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGIQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENP  437
            +AE NY+LG QLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSEVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQN  492
            PAEVR+RRP+R+AKV VSE+EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD++
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  546 bits (2061),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 404/474 (86%), Gaps = 0/474 (0%)

Query  17   LLDEIMAQARITPVDEGYSVAKQGVAALIANILDSGTTSDPVNKALVDSMIVELDKKLSK  76
            ++D IM  +R +  DE+Y++AK GV  +I++I+ ++++ + +NK  +D MI ++D  +S+
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  77   QMDVILHAKELQEMESSWRSLKLLVDRTDFRENIKIQVLHATKEELLEDFEFSPEITQSG  136
            QMD ILH  ++Q++ES+WR+L +LV+RT+F+ENIKI++++ TK+E LEDFE +P+IT + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  137  LYKHVYSSGYGQFGGQPVGAVIGDYAFTHSAPDIKLMQYVSAVGAMAHAPFISSVAPSFF  196
            LYK++YSS YGQFGG+PVGA++GDYA+  S+PD++++  +S+++AM+HAPF++S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  197  GVDSFTDLSSIKDLKSVFEGPAYTKWRALRESEDARYLGLTAPRFLARLPYDPTENPIKG  256
            G+D++++L+ I+DLK+++EGP Y KWR++RE+ED++Y GL   RFL+R PY+P ENPIK 
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  257  FNYQEDISSDHDHYLWGNTAYLMGTSLTDSFAKYRWCPNIIGPQSGGAIHDLPVHVYEAM  316
            FNY+E++ + H+H LWGNT Y  +T LTDSFA+YRWC NIIGP++GGA+ DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  317  GQLQAKIPTEVLITDRREYELSEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGRE  376
            G  Q+KIPTEVLITDR EYEL+E GFI++T+R+DS+NA FFSAN+  KPK+FPNT EG+E
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  377  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNSWIRQFVADQENPP  436
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W+RQ+V+DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  437  AEVRSRRPLRAAQIKVLDVEGEPGWYQVAMAVRPHFKYMGASFELSLVGRLDKE  490
            AEVRSRRP+R+A++ V ++EGE+GWY++ + VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  546 bits (2062),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 277/474 (59%), Positives = 407/474 (86%), Gaps = 1/474 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTE-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI+E++ + ++E K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHNEEVQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILHNE++Q +ESTWRGL +LV++T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDYNMSASSPDIKLMEYMANVGAMSHAPFITSASAKF  197
             LYK+IY+ EYGQFGG PVGA++ DY ++AS+PD++++  M++++AMSHAPF+TS SA F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYTKWRGLREHEDARYLGLCTSRFMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR +RE+ED++Y GL  +RF+ R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYDEHVTDSHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGSVHDLPVYNFEA  317
             F+Y E+V +SH++ LWGN+ YA A+++++SFA+YRWC NIIGP++GG+V DLP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGK  377
             G  ++KIPTE+L++DR EYELAE GFIA+T+R++S+NA FFSAN+  KPK+F+NTPEGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENP  437
            +AE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQ  491
            PAEVR+RRP+R+AKV VS++EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  546 bits (2062),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 277/474 (59%), Positives = 407/474 (86%), Gaps = 1/474 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTE-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI+E++ + ++E K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHNEEVQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILHNE++Q +ESTWRGL +LV++T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDYNMSASSPDIKLMEYMANVGAMSHAPFITSASAKF  197
             LYK+IY+ EYGQFGG PVGA++ DY ++AS+PD++++  M++++AMSHAPF+TS SA F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYTKWRGLREHEDARYLGLCTSRFMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR +RE+ED++Y GL  +RF+ R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYDEHVTDSHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGSVHDLPVYNFEA  317
             F+Y E+V +SH++ LWGN+ YA A+++++SFA+YRWC NIIGP++GG+V DLP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGK  377
             G  ++KIPTE+L++DR EYELAE GFIA+T+R++S+NA FFSAN+  KPK+F+NTPEGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENP  437
            +AE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQ  491
            PAEVR+RRP+R+AKV VS++EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  546 bits (2062),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 277/474 (59%), Positives = 407/474 (86%), Gaps = 1/474 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTE-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI+E++ + ++E K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHNEEVQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILHNE++Q +ESTWRGL +LV++T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDYNMSASSPDIKLMEYMANVGAMSHAPFITSASAKF  197
             LYK+IY+ EYGQFGG PVGA++ DY ++AS+PD++++  M++++AMSHAPF+TS SA F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYTKWRGLREHEDARYLGLCTSRFMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR +RE+ED++Y GL  +RF+ R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYDEHVTDSHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGSVHDLPVYNFEA  317
             F+Y E+V +SH++ LWGN+ YA A+++++SFA+YRWC NIIGP++GG+V DLP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGK  377
             G  ++KIPTE+L++DR EYELAE GFIA+T+R++S+NA FFSAN+  KPK+F+NTPEGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENP  437
            +AE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQ  491
            PAEVR+RRP+R+AKV VS++EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  546 bits (2062),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 280/490 (58%), Positives = 414/490 (85%), Gaps = 2/490 (0%)

Query  2    TSKAMQQGTVSEFQHGILDQIIAETRLSPDDDAYEIAKRGVAAFIEELLKPHNSNEPVKK  61
             + A  Q ++ E+  +I+D I+  +R S +D++Y+IAK GV  FI E++K +++++ ++K
Sbjct  3    GASANTQTSIKEL--SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  62   ALVDRMITEIDAKLSQQMDEIIHHAEFQALEASWRGLQLLIDRTDFRENIKIELLSISRQ  121
              +D MI++ID  +S+QMDEI+H+ ++Q LE++WRGL +L++RT+F+ENIKI+L+ +++Q
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  122  DLLEDFEDSPEVVQSGLYKHVYTAEYGQFGGNPVGAIIANYFFSPSAPDVKTMQYVSSVA  181
            + LEDFE +P++  + LYK++Y++EYGQFGG+PVGAI+++Y +++S+PD++ +  +SS+A
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  182  CMAHAPFIAAAGPNFFGLEQFTGLPDLKDLRDHFEGPQFAKWQSFRQQEDARYLALTVPR  241
             M+HAPF+++ ++ FFGL++++ LP ++DL+  +EGPQ+ KW++FR++ED++Y +L V R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  242  FLLRSPYEPEENPVKTFAYKENVANSHEHYLWGNTAYAFATKLTDSFAKFRWCPNIIGPL  301
            FL RSPYEP+ENP+K F YKENV NSH+H LWGNT YAFAT+LTDSFA++RWC NIIGP 
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  302  SGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSAS  361
            +GGAV DLP   ++S G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSA+
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  362  SVQKPKFFGNSPEGKTAELNYRLGTQLPYMMVVNRLAHYLKVLQREQIGSWKERADLEAQ  421
            +  KPK+F N+PEGK AE NYRLGTQLPY+ +V+RLAHYLKVLQRE+IGSWKERAD+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  422  LNKWIRQYIADQENPSSEVRGRRPLRSAQIIVSDVEGDPGWYRVSLNVRPHFKYMGADFT  481
            LN W+RQY++DQENP++EVR+RRP+R+A+++VS++EG++GWYR++LNVRPHFK+MGA+F 
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  482  LSLVGKMDKE  491
            LSLVGK+D+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  543 bits (2048),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 276/474 (59%), Positives = 408/474 (87%), Gaps = 1/474 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTE-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI+E++ + ++E K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHSEEVQAIESTWLGLKYLVEHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILH+E++Q +ESTW GL +LVE+T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDFAMSASSPDIKLMEYMANVGAMSHAPFITSASAKF  197
             LYK+IY+ EYGQFGG PVGA++ D+A++AS+PD++++  M++++AMSHAPF+TS SA F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCTSRFMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR +RE+ED++Y GL  +RF+ R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYDEQVTDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGAVQDLPVYNFEA  317
             F+Y E+V ++H++ LWGN+ YA A+++++SFA+YRWC NIIGP++GGAV+DLP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGK  377
             G  ++KIPTE+L++DR EYELAE GFIA+T+R++S+NA FFSAN+  KPK+F+NTPEGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENP  437
            +AE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQ  491
            PAEVR+RRP+R+AKV VS++EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  543 bits (2048),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 276/474 (59%), Positives = 408/474 (87%), Gaps = 1/474 (0%)

Query  19   SLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTE-KVDQSLVDLMISEIDQKLS  77
            S++DSI++ +R    DE++++AK GV  FI+E++ + ++E K+++  +D MI++ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQVDAILHSEEVQAIESTWLGLKYLVEHTDFRENIQIELISAKKDEVLDDFEDAPEVVKS  137
            +Q+D ILH+E++Q +ESTW GL +LVE+T+F+ENI+I+L+   K+E L+DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKQIYTREYGQFGGKPVGAVICDFAMSASSPDIKLMEYMANVGAMSHAPFITSASAKF  197
             LYK+IY+ EYGQFGG PVGA++ D+A++AS+PD++++  M++++AMSHAPF+TS SA F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCTSRFMLRTPYSVEDNPIK  257
            FGLD+Y ELP+++DLK+++EGPQY KWR +RE+ED++Y GL  +RF+ R+PY  ++NPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  AFDYDEQVTDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGAVQDLPVYNFEA  317
             F+Y E+V ++H++ LWGN+ YA A+++++SFA+YRWC NIIGP++GGAV+DLP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGK  377
             G  ++KIPTE+L++DR EYELAE GFIA+T+R++S+NA FFSAN+  KPK+F+NTPEGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  QAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENP  437
            +AE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER+D+E  LN W+RQYVSDQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASFDLSLVGKLDQ  491
            PAEVR+RRP+R+AKV VS++EG++GWY+++++VRPHFK+MGA+F+LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  542 bits (2047),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 281/490 (58%), Positives = 409/490 (84%), Gaps = 0/490 (0%)

Query  3    LHEESSTTLAPGSTTSLLDEIMSQARMTPENDGYHIAKQGVAAFISSILDTGSNEEPINK  62
            +   S+ T ++    S++D IM  +R + E+++Y+IAK GV  FI+ I+ T+S E+ INK
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  63   LVVDRMIVELDKTLSTQVDEIMHAKEFQELESSWRSLKLLVDRTDFRENIKINIIHATKE  122
              +D MI ++D  +S Q+DEI+H  ++Q+LES+WR+L +LV+RT+F+ENIKIN+++ TK+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  123  ELLEDFEFSPEIIQSGLYKHVYSTGYGQFGGEPVAAVIGNYAFSNSSPDIKLMQYVSAVG  182
            E LEDFE +P+I  + LYK++YS+ YGQFGGEPV+A++G+YA++ S+PD++++  +S+++
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  183  AMAHAPFLSSVAPDFFGISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPR  242
            AM+HAPFL+S++++FFG+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  243  FLLRLPYSTVENPIKNFNYQEDVSKDHEHFLWGNTAYLLATCLTDSFAKYRWCPNIIGPQ  302
            FL R PY   ENPIK+FNY+E+V + H+H+LWGNT Y +AT LTDSFA+YRWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  303  SGGTVSDLPVHLFEAMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSAN  362
            +GG+V DLP  ++E+ G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  363  SVQKPKVFPNTREGKMAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERE  422
            +  KPK+FPNT EGK AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  423  LNTWLKQYIADQENPPTDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFE  482
            LN W++QY++DQENPP++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  483  LSLVGRLDKE  492
            LSLVG+LD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  541 bits (2041),  Expect = 5e-155, Method: Compositional matrix adjust.
 Identities = 291/491 (60%), Positives = 418/491 (86%), Gaps = 1/491 (0%)

Query  1    MTTTAAAVETGNLAEAGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVK  60
            M+ ++A  +T+ + E +I+D I+  +R + +DE+Y+IAK GV  FI E++K ++ ++ ++
Sbjct  1    MSGASANTQTS-IKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKIN  59

Query  61   KAMVDRMIAEIDAKLSRQMDEILHHPEFQALESSWRGLKLLVDRTNFRENIKLEILNASK  120
            K  +D MIA+ID  +SRQMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIK+++++ +K
Sbjct  60   KYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTK  119

Query  121  QDLLEDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIANYFFDPSAPDVKTLQYVASV  180
            Q+ LEDFE +P+I  + LYK+IY++EYGQFGG+PVGA++++Y +++S+PD++ L  ++S+
Sbjct  120  QEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSI  179

Query  181  ASMSHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFREQEDARYVGLTVP  240
            A+MSHAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FRE+ED++Y GL V 
Sbjct  180  AAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVT  239

Query  241  RFLLRNPYDPEDNPVKSFVYKENVANSHEHYLWGNTAYTFASRLTDSFAKFRWCPNIIGP  300
            RFL R+PY+P++NP+K F YKENV NSH+H LWGNT Y+FA+RLTDSFA++RWC NIIGP
Sbjct  240  RFLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGP  299

Query  301  QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDnaaffsa  360
            ++GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSA
Sbjct  300  KAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSA  359

Query  361  nsaQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAHYLKVLQREQIGAWKERTDLEL  420
            N+A KPK+F N+ EGK AE NY+LGTQLPY+F+V+RLAHYLKVLQRE+IG+WKER+D+E 
Sbjct  360  NAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIEN  419

Query  421  ELNKWIRQFVADQENPSAEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGADF  480
             LN W+RQ+V+DQENP+AEVRSRRP+R+A+V VS++EGE+GWYR++L+VRPHFK+MGA+F
Sbjct  420  GLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANF  479

Query  481  TLSLVGKLDKE  491
             LSLVGKLD+E
Sbjct  480  ELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  540 bits (2039),  Expect = 7e-155, Method: Compositional matrix adjust.
 Identities = 291/490 (60%), Positives = 416/490 (85%), Gaps = 0/490 (0%)

Query  1    MSTAAQQQSAENSEFSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKK  60
            MS A+ +  +   E+SI+DSI+  +R + +DE+Y+IAK GV  FI E++K ++  + ++K
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  61   ALVDRMIAEIDAKLSRQMDEILHHPDFQAMESAWRGLQLLVDRTNFRENIKIEILNVSKQ  120
              +D MIA+ID  +SRQMDEILH+ ++Q +ES+WRGL +LV+RTNF+ENIKI++++V+KQ
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  121  DLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAVIANYYLSPSSPDVKLMQYVSSVS  180
            + L+DFE +P++  A LYK+IY++EYGQFGG+PVGA++++Y L++S+PD++++  +SS++
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  181  CMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFRESEDARYIGLTVPR  240
             MSHAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FRE+ED++Y GL V R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  241  FLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQ  300
            FL R+PY+P+ENP+K F YKE V NSH+H LWGNT YAF+T+LTDSFA++RWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  301  SGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDnaaffsan  360
            +GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  361  saQKPKFFGISAEGKTAELNYKLGTQLPYMMIVNRLAHYIKVLQREQLGSWKERTDLELE  420
            +A KPK+F  ++EGK AE NY+LGTQLPY+ +V+RLAHY+KVLQRE++GSWKER+D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  421  LNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADFT  480
            LN W+RQYV+DQENP+AEVR+RRP+R+A+V+VS++EGE+GWYR++LNVRPHFK+MGA+F 
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  481  LSLVGKLDKE  490
            LSLVGKLD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  540 bits (2039),  Expect = 7e-155, Method: Compositional matrix adjust.
 Identities = 276/476 (58%), Positives = 403/476 (85%), Gaps = 0/476 (0%)

Query  16   VGLLDQIVAQTNLTPEDETYGIAKRGVSAFIEELLKPQNQEEPVKKALIDKMITEIDQRL  75
            ++++D I+  +  + EDE+Y IAK GV  FI E++K ++ E+ ++K  +D MI++ID+ +
Sbjct  15   LSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDII  74

Query  76   SKQVDEILHHSSFQQLESAWRGLKLLVDRTDFRENIKIEVINVSKTDLLEDFEDASEITQ  135
            S+Q+DEILH+  +QQLES+WRGL +LV+RT+F+ENIKI++++V+K + LEDFE  ++IT 
Sbjct  75   SRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITT  134

Query  136  SGLYKHVYTNEFGTFGGQPVGAIIGNYDFGPSAPDIKNLQNLASVAAMSHAPFISAAGPK  195
            + LYK++Y++E+G FGG+PVGAI+G+Y + +S+PD++ L +++S+AAMSHAPF+++ ++ 
Sbjct  135  ATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAG  194

Query  196  FFGLESFEGLPDLKDLNDHFESPQYAKWQSFREQEDSRYVGLTLPRFLLRQPYDPEENPV  255
            FFGL+++  LP ++DL+  +E+PQY KW++FRE+EDS+Y GL + RFL R PY+P+ENP+
Sbjct  195  FFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPI  254

Query  256  KAFNYHENVSATHEDYLWGNTAFTMATRITESFANFRWCPNIIGPQSGGAVEDLPLHHFE  315
            K FNY ENV  +H++ LWGNT ++ ATR+T+SFAN+RWC NIIGP++GGAV DLP   +E
Sbjct  255  KKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYE  314

Query  316  SMGDIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKAKFFGNTEEG  375
            S G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSAN+  K+K+F NT EG
Sbjct  315  SFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEG  374

Query  376  KNAELNFRLGTQLPYLFIISRLAHYIKVLQREQIGSWKERTDLEQELNTWIRQYIADQEN  435
            K+AE N+RLGTQLPY+F++SRLAHY+KVLQRE+IGSWKER+D+E+ LN W+RQY++DQEN
Sbjct  375  KEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQEN  434

Query  436  PPAEVRSRRPLRAANIEVMDVEGNPGWYKVNLSVRPHFKYMGSDFTLSLVGKLDQE  491
            PPAEVRSRRP+R+A++ V ++EG++GWY++NL+VRPHFK+MG++F LSLVGKLD+E
Sbjct  435  PPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  540 bits (2039),  Expect = 7e-155, Method: Compositional matrix adjust.
 Identities = 276/476 (58%), Positives = 403/476 (85%), Gaps = 0/476 (0%)

Query  16   VGLLDQIVAQTNLTPEDETYGIAKRGVSAFIEELLKPQNQEEPVKKALIDKMITEIDQRL  75
            ++++D I+  +  + EDE+Y IAK GV  FI E++K ++ E+ ++K  +D MI++ID+ +
Sbjct  15   LSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDII  74

Query  76   SKQVDEILHHSSFQQLESAWRGLKLLVDRTDFRENIKIEVINVSKTDLLEDFEDASEITQ  135
            S+Q+DEILH+  +QQLES+WRGL +LV+RT+F+ENIKI++++V+K + LEDFE  ++IT 
Sbjct  75   SRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITT  134

Query  136  SGLYKHVYTNEFGTFGGQPVGAIIGNYDFGPSAPDIKNLQNLASVAAMSHAPFISAAGPK  195
            + LYK++Y++E+G FGG+PVGAI+G+Y + +S+PD++ L +++S+AAMSHAPF+++ ++ 
Sbjct  135  ATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAG  194

Query  196  FFGLESFEGLPDLKDLNDHFESPQYAKWQSFREQEDSRYVGLTLPRFLLRQPYDPEENPV  255
            FFGL+++  LP ++DL+  +E+PQY KW++FRE+EDS+Y GL + RFL R PY+P+ENP+
Sbjct  195  FFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPI  254

Query  256  KAFNYHENVSATHEDYLWGNTAFTMATRITESFANFRWCPNIIGPQSGGAVEDLPLHHFE  315
            K FNY ENV  +H++ LWGNT ++ ATR+T+SFAN+RWC NIIGP++GGAV DLP   +E
Sbjct  255  KKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYE  314

Query  316  SMGDIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKAKFFGNTEEG  375
            S G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSAN+  K+K+F NT EG
Sbjct  315  SFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEG  374

Query  376  KNAELNFRLGTQLPYLFIISRLAHYIKVLQREQIGSWKERTDLEQELNTWIRQYIADQEN  435
            K+AE N+RLGTQLPY+F++SRLAHY+KVLQRE+IGSWKER+D+E+ LN W+RQY++DQEN
Sbjct  375  KEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQEN  434

Query  436  PPAEVRSRRPLRAANIEVMDVEGNPGWYKVNLSVRPHFKYMGSDFTLSLVGKLDQE  491
            PPAEVRSRRP+R+A++ V ++EG++GWY++NL+VRPHFK+MG++F LSLVGKLD+E
Sbjct  435  PPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  540 bits (2038),  Expect = 8e-155, Method: Compositional matrix adjust.
 Identities = 278/488 (57%), Positives = 406/488 (84%), Gaps = 1/488 (0%)

Query  5    VAEHTASAASDGPLLDQIMAKTRMAPSDEGYDIARQGVAAFISELLKGEGEETPQVNKAV  64
             + +T ++  + +++D IM  +R +  DE+Y+IA+ GV  FI+E++K ++ E  ++NK  
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAEN-KINKYT  62

Query  65   VDRMIVELDRKIGQQVDEILHLPEFQRLESAWRGLKLLVDRTDFRENIRLNLLHASKEEL  124
            +D MI ++D  I++Q+DEILH  ++Q+LES+WRGL +LV+RT+F+ENI++NL++ +K+E 
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  125  LEDFEFSPELPQSGLYQHVYASGYGQFGGDPVAGVIGVYDFQPTTPDIKLLQYSAAVGAT  184
            LEDFE +P++  + LY+++Y+S YGQFGG+PV++++G Y ++++TPD+++L   ++++A 
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  185  AHAPFISSVAPEFFGIERYQDLPNIKDLAATLQGPKYARWRSLRESEDARYLGLTAPRFL  244
            +HAPF++S+++ FFG++ Y +LP+I+DL A L+GP+Y +WR++RE+ED++Y GL   RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  245  LRMPYDPVENPVKTFNYRESVSESHEHYLWGNTAYLFAERLTDSFARYRWCPNIIGPQSG  304
             R PY+P ENP+K FNY+E+V +SH+H LWGNT Y FA RLTDSFA YRWC NIIGP++G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  305  GAVEHLPVHTFESMGQLQAKIPTEVLITDRREYELAEEGFIALTMRKDSDNAAFFSANSV  364
            GAV +LP   +ES G  Q+KIPTEVLITDR EYELAE GFIA+T+R+DS+NA FFSAN+ 
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  365  QRPRRFPNTAEGRAAETNFKLGTQLPYLFVVNRLAHYIKVLQREQIGAWKERQDLERELN  424
             +P+ FPNT+EG+ AETN++LGTQLPY+F+V+RLAHY+KVLQRE+IG+WKER D+E  LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  425  DWIRQYVADQENPPAEVRSRRPLRAASIQVSDLEGDPGWYQVSLAVRPHFKYMGANFELS  484
            +W+RQYV+DQENPPAEVRSRRP+R+A + VS++EG++GWY+++L VRPHFK+MGANFELS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  485  LVGRLDKE  492
            LVG+LD+E
Sbjct  483  LVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  539 bits (2036),  Expect = 1e-154, Method: Compositional matrix adjust.
 Identities = 289/489 (60%), Positives = 414/489 (85%), Gaps = 0/489 (0%)

Query  4    SAAAVEHGNHLAEGGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVKKA  63
            S+A+ +    + E +I+D I+  +R + +DE+Y+IAK GV  FI E++K ++ ++ ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  64   MVDRMIAEIDAKLSRQMDEILHHPQFQALESSWRGLKLLVDRTNFRENIKLELLNASKQD  123
             +D MIA+ID  +SRQMDEILH+ Q+Q LES+WRGL +LV+RTNF+ENIK++L++ +KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  124  LLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIANYFFDPSAPDVKTMQYVASVAS  183
             L+DFE +P+I  + LYK+IY++EYGQFGG+PVGA++++Y +++S+PD++ +  ++S+A+
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  184  MSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTVPRF  243
            MSHAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FRE+ED++Y GL V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  244  LLRNPYDPEDNPVKSFVYKENVAGSHEHYLWGNTAYAFASRLTDSFAKFRWCPNIIGPQS  303
            L R+PY+P++NP+K F YKENV  SH+H LWGNT YAFA+RLTDSFA++RWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  304  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDnaaffsans  363
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSAN+
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  364  aQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAHYLKVLQREQIGAWKERTDLELEL  423
            A KPK+F N+ EGK AE NY+LGTQLPY+F+V+RLAHYLKVLQRE+IG+WKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  424  NKWIRQFVADQENPSSEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGADFTL  483
            N W+RQ+V+DQENP++EVRSRRP+R+A+V VS++EGE+GWYR++L+VRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  484  SLVGKLDKE  492
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  538 bits (2029),  Expect = 4e-154, Method: Compositional matrix adjust.
 Identities = 283/475 (60%), Positives = 401/475 (85%), Gaps = 0/475 (0%)

Query  18   SLLDEIMSQARMTPENDGYYIAKQGVAAFIGSILDTGSNEEPINKLLVDKMIVELDKKLS  77
            S++D IM  +R + E+++Y IAK GV  FI  I+ T+S E+ INK  +D MI ++D  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   EQMDEILHAQQFQELESSWRSLKILVDRTDFRENIKINVIHATKDELLEDFEFSPEIIQS  137
             QMDEILH +Q+Q+LES+WR+L +LV+RT+F+ENIKIN+++ TK+E LEDFE +P+I  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GFYKHVYSTGYGQFGGEPVAAVIGNYAFSNTSPDIKLMQYVSSVGAMAHAPFLSSVSPEF  197
             +YK++YS+ YGQFGGEPV+A++G+YA++ ++PD++++  +SS++AM+HAPFL+S+S+ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGVNSFTDLPAIKDLKSVFEGPSHTKWRALRESEDSRYLGLTAPRFLLRLPYSSVENPIK  257
            FG++++++LP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY + ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  NFNYQENVSRDHDHFLWGNTAYLLASCLTDSFAKYRWCPNIIGPQSGGAVSDLPVHLYEA  317
            +FNY+ENV   H+H+LWGNT Y +A+ LTDSFA+YRWC NIIGP++GGAV DLP  +YE+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQVQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGK  377
             G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  IAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNMWLKQYIADQENP  437
             AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PTDVRSRRPLRAAEIKVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  492
            P++VRSRRP+R+A + V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  538 bits (2029),  Expect = 4e-154, Method: Compositional matrix adjust.
 Identities = 275/472 (59%), Positives = 400/472 (85%), Gaps = 0/472 (0%)

Query  21   DEIMSQARMTPENDGYHIAKQGVAAFISSILDTGTNEEPVNKLVVDRMIVELDKTLSTQV  80
            D IM  +R + E+++Y+IAK GV  FI+ I+ T++ E+ +NK  +D MI ++D  +S Q+
Sbjct  19   DSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQM  78

Query  81   DEIMHAKEFQELESSWRSLKLLVDRTDFRENIKINIIHATKEELLEDFEFSPEIIQSGLY  140
            DEI+H  ++Q+LES+WR+L +LV+RT+F+ENIKIN+++ TK+E LEDFE +P+I  + LY
Sbjct  79   DEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLY  138

Query  141  KHVYSTGYGQFGGEPVAAVIGNYAFSNSSPDIKLMQYVSAVGAMAHAPFLSSVAPDFFGI  200
            K++YS+ YGQFGGEPV+A++G+YA++ S+PD++++  +S+++AM+HAPFL+S++++FFG+
Sbjct  139  KRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGL  198

Query  201  SSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKNFN  260
             +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+FN
Sbjct  199  DNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFN  258

Query  261  YQEDVSKDHEHFLWGNTAYLLATCLTDSFAKYRWCPNIIGPQSGGTVSDLPVHLFEAMGQ  320
            Y+E+V + H+H+LWGNT Y +AT LTDSFA+YRWC NIIGP++GG+V DLP  ++E+ G 
Sbjct  259  YKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGT  318

Query  321  IQAKIPTEVLVTDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKMAE  380
             Q+KIPTEVL+TDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK AE
Sbjct  319  TQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAE  378

Query  381  TNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNTWLKQYIADQENPPTD  440
            TNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP++
Sbjct  379  TNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAE  438

Query  441  VRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  492
            VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  439  VRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  538 bits (2029),  Expect = 4e-154, Method: Compositional matrix adjust.
 Identities = 287/489 (59%), Positives = 414/489 (85%), Gaps = 0/489 (0%)

Query  4    SAAAVEHGNHLAEGGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVKKA  63
            S+A+ +    + E +I+D I+  +R + +DE+Y+IAK GV  FI E++K ++ ++ ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  64   MVDRMIAEIDAKLSQQMDEILHHPQFQALESSWRGLKLLVDRTNFRENIKLELLNASKQD  123
             +D MIA+ID  +S+QMDEILH+ Q+Q LES+WRGL +LV+RTNF+ENIK++L++ +KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  124  LLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIANYFFDPSAPDVKTMQYVASVAS  183
             L+DFE +P+I  + LYK+IY++EYGQFGG+PVGA++++Y +++S+PD++ +  ++S+A+
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  184  MSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTVPRF  243
            MSHAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FRE+ED++Y GL V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  244  LLRNPYDPEDNPVKSFVYKENVAGSHEHYLWGNTAYTFASRLTDSFAKFRWCPNIIGPQS  303
            L R+PY+P++NP+K F YKENV  SH+H LWGNT Y+FA+RLTDSFA++RWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  304  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDnaaffsans  363
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSAN+
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  364  aQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAHYLKVLQREQIGAWKERTDLELEL  423
            A KPK+F N+ EGK AE NY+LGTQLPY+F+V+RLAHYLKVLQRE+IG+WKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  424  NKWIRQFVADQENPSSEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGADFTL  483
            N W+RQ+V+DQENP++EVRSRRP+R+A+V VS++EGE+GWYR++L+VRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  484  SLVGKLDKE  492
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  538 bits (2029),  Expect = 4e-154, Method: Compositional matrix adjust.
 Identities = 279/490 (57%), Positives = 409/490 (84%), Gaps = 0/490 (0%)

Query  3    LNAEAQEQQAPASTGSLLDEIMAQSRMSPETEAYDIAKQGVAAFISNIFASESEDQQINR  62
            +++ + + Q++    S++D IM  SR S E E+Y+IAK GV  FI++I  ++S +++IN+
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  63   LLIDKMLVELDNKLSTQVDEILHAPKFQEIEASWRSLKLLVDRTDFRENIKINILHATKE  122
              +D M+ ++D+ +S Q+DEILH  ++Q++E++WR+L +LV+RT+F+ENIKIN+++ TK+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  123  ELLEDFEFSPEIVQSGFYQHVYSSGYGQFGGEPVATVIGNYAFNNTAPDMKLMQYVSTVG  182
            E LEDFE +P+I  + +Y+++YSS YGQFGGEPV++++G+YA+N ++PDM+++  +S+++
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  183  AMAHAPFLSSVSPNFFGINSYAELPAIKDLKSVFEGPAHTKWRSLREAEDSRYLGLTAPR  242
            AM+HAPFL+S+S+ FFG+++YAELP I+DLK+++EGP   KWR++RE EDS+Y GL   R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  243  FLLRLPYSPTENPVKMFNYSENVKQDHEHYLWGNTAFLLASCINDSFAKYRWCPNIIGPQ  302
            FL R PY P ENP+K FNY ENV + H+H LWGNT + +A+ + DSFA+YRWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  303  SGGTVNDLPVHIFEAMGELQTKIPTEVLVTDRREFELAEEGFITLTMRKGSDNAAFFSAN  362
            +GG+V+DLP  I+E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  363  SVQKPKVFPNTPEGKLAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERE  422
            +  KPK+FPNTPEGK AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  423  LNIWLKQYVADQENPPADVRSKRPLRSAEIKVLDVDGDPGWYQVAIQVRPHFKYMGANFE  482
            LN W++QYV+DQENPPA+VRS+RP+R+A + V +++G++GWY++ ++VRPHFK+MGANFE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  483  LSLVGRLDKE  492
            LSLVG+LD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  537 bits (2028),  Expect = 5e-154, Method: Compositional matrix adjust.
 Identities = 285/487 (59%), Positives = 404/487 (83%), Gaps = 1/487 (0%)

Query  8    TSPLAESVAPQHSLLDEIMSRTRIQPESDGYDVARQGVVAFIRSILTSDTGDA-INRLAV  66
            +S+ +++   + S++D IM  +R   E ++Y++A+ GVV FI  I+ +D+++  IN+ ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  67   DRMITVLDQKLSAQTDEILHSEPVQQLESFWRSMKLLVDRTDFKENIKIHLIHATKEELL  126
            D MI+ +D+ +S Q DEILH+E +QQLES WR++ +LV+RT+F+ENIKI+L++ TK+E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  127  EDFEFAPEIVQSGFYKHIYSSGYGQFGGEPVAAVVGAYEFKNTTPDMKLLQYVSAVGSMA  186
            EDFE  P+I  + +YK+IYSS YGQFGGEPV+A++G Y ++ +TPDM++L  +S++++M+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  187  HAPFLSSVAPQFFGLNSYTELPTIKDLYSVFEGPAYTKWRALRESEDSRYLGLTAPRVLL  246
            HAPFL+S+++ FFGL++Y+ELP I+DL +++EGP Y KWR++RE+EDS+Y GL   R L 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  247  RLPYSPTENPVKSFCYEEDVRHRHEDYLWGNTAFLLACSLTDSFSKYRWCPNIIGPQSGG  306
            R PY P ENP+K F Y E+V++ H++ LWGNT + +A  LTDSF++YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  307  AVKDLPVHLYESLGQIQAKIPTEVLITDRREYELAEEGFISLTMRKDSDNACFFSANSVQ  366
            AVKDLP  +YES+G  Q+KIPTEVLITDR EYELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  367  KPKVFPNTREGKEAETNYKLGTQLPYMFIITRLAHFIKVLQREQIGSWKERSDLERELNI  426
            KPK+FPNT EGKEAETNY+LGTQLPY+F+++RLAH++KVLQRE+IGSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  427  WIRQYVADQENPPADVRSRKPLRAAKIEVQDVEGEPGWYKVALAVRPHFKYMGATFELAL  486
            W+RQYV+DQENPPA+VRSR+P+R+AK+ V ++EGE+GWY++ L VRPHFK+MGA FEL+L
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  487  VGRLDKE  493
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  537 bits (2027),  Expect = 5e-154, Method: Compositional matrix adjust.
 Identities = 287/489 (59%), Positives = 414/489 (85%), Gaps = 0/489 (0%)

Query  4    SAAAVEHGKHLAEGGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVKKA  63
            S+A+ +    + E +I+D I+  +R + +DE+Y+IAK GV  FI E++K ++ ++ ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  64   MVDRMIAEIDAKLSQQMDEILHHPQFQALESSWRGLKLLVDRTNFRENIKLELLNASKQD  123
             +D MIA+ID  +S+QMDEILH+ Q+Q LES+WRGL +LV+RTNF+ENIK++L++ +KQ+
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  124  LLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIANYFFDPSAPDVKTMQYVASVAS  183
             L+DFE +P+I  + LYK+IY++EYGQFGG+PVGA++++Y +++S+PD++ +  ++S+A+
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  184  MSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTVPRF  243
            MSHAPF+++ ++ FFGL++++ LP ++DLK  +EGPQ+ KW++FRE+ED++Y GL V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  244  LLRNPYDPEDNPVKSFVYKENVAGSHEHYLWGNTAYTFASRLTDSFAKFRWCPNIIGPQS  303
            L R+PY+P++NP+K F YKENV  SH+H LWGNT Y+FA+RLTDSFA++RWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  304  GGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDnaaffsans  363
            GGAV DLP   +ES G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSAN+
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  364  aQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAHYLKVLQREQIGAWKERTDLELEL  423
            A KPK+F N+ EGK AE NY+LGTQLPY+F+V+RLAHYLKVLQRE+IG+WKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  424  NKWIRQFVADQENPSSEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGADFTL  483
            N W+RQ+V+DQENP++EVRSRRP+R+A+V VS++EGE+GWYR++L+VRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  484  SLVGKLDKE  492
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  536 bits (2024),  Expect = 1e-153, Method: Compositional matrix adjust.
 Identities = 279/490 (57%), Positives = 409/490 (84%), Gaps = 0/490 (0%)

Query  10   LNAEAQEQQAPASTGSLLDEIMAQSRMSPETEAYDIAKQGVAAFISNIFASESEDQQINR  69
            +++ + + Q++    S++D IM  SR S E E+Y+IAK GV  FI++I  ++S +++IN+
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  70   LLIDKMLVELDNKLSTQVDEILHAPKFQEIEASWRSLKLLVDRTDFRENIKINILHATKE  129
              +D M+ ++D+ +S Q+DEILH  ++Q++E++WR+L +LV+RT+F+ENIKIN+++ TK+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  130  ELLEDFEFSPEIVQSGFYQHVYSSGYGQFGGEPVATVIGNYAFNNTAPDMKLMQYVSTVG  189
            E LEDFE +P+I  + +Y+++YSS YGQFGGEPV++++G+YA+N ++PDM+++  +S+++
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  190  AMAHAPFLSSVSPNFFGINSYAELPAIKDLKSVFEGPAHTKWRSLREAEDSRYLGLTAPR  249
            AM+HAPFL+S+S+ FFG+++YAELP I+DLK+++EGP   KWR++RE EDS+Y GL   R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  250  FLLRLPYSPTENPVKMFNYSENVKQDHEHYLWGNTAFLLASCINDSFAKYRWCPNIIGPQ  309
            FL R PY P ENP+K FNY ENV + H+H LWGNT + +A+ + DSFA+YRWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  310  SGGTVNDLPVHIFEAMGELQTKIPTEVLVTDRREFELAEEGFITLTMRKGSDNAAFFSAN  369
            +GG+V+DLP  I+E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  370  SVQKPKVFPNTPEGKLAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERE  429
            +  KPK+FPNTPEGK AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  430  LNIWLKQYVADQENPPADVRSKRPLRSAEIKVLDVDGDPGWYQVAIQVRPHFKYMGANFE  489
            LN W++QYV+DQENPPA+VRS+RP+R+A + V +++G++GWY++ ++VRPHFK+MGANFE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  490  LSLVGRLDKE  499
            LSLVG+LD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  536 bits (2021),  Expect = 2e-153, Method: Compositional matrix adjust.
 Identities = 277/475 (59%), Positives = 398/475 (84%), Gaps = 0/475 (0%)

Query  18   SLLDEIMSQARITPENDGYYIAKQGIAAFISSILDTGANEEPINKLVVDKMIVELDKKLS  77
            S++D IM  +R + E+++Y IAK G+  FI+ I+ T++ E+ INK  +D MI ++D  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   EQMDEIMHAKPFQELESSWRSLKILVDRTDFRENIKINIIHATKDEMLEDFEFSPEIIQS  137
             QMDEI+H   +Q+LES+WR+L +LV+RT+F+ENIKIN+++ TK+E LEDFE +P+I  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GFYKHVYSTGYGQFGGEPVAAVIGNYAFTNSSPDIKLMQYVSAVGAMAHSPFLSSVSPEF  197
             +YK++YS+ YGQFGGEPV+A++G+YA+  S+PD++++  +S+++AM+H+PFL+S+S+ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGVNSFTDLPAIKDLKSVFEGPSHTKWRALRESEDSRYLGLTAPRFLLRLPYSSVENPIK  257
            FG++++++LP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY + ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  NFNYQENVSRDHEHFLWGNTAYLMASCLTDSFAKYRWCPNIIGPQSGGTVSDLPVHLYEA  317
            +FNY+ENV   H+H+LWGNT Y  A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQVQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGK  377
             G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  IAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNMWLKQYIADQENP  437
             AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PTDVRSRRPLRAAEIKVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  492
            P++VRSRRP+R+A + V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  535 bits (2020),  Expect = 2e-153, Method: Compositional matrix adjust.
 Identities = 269/487 (56%), Positives = 405/487 (84%), Gaps = 0/487 (0%)

Query  10   SEDTTTGTISNATLLDQIMAETKLIPTHEGYQVARHGVSAFIAEILKSNDPDQLINKHRV  69
            +   T  +I + +++D IM  ++    +E+Y++A+ GV  FI+EI+K++ +++ INK  +
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  70   DQMIAEVDRVLGKQMDAILHHPEFQQLESSWRGLKILVDRTDFRENIKLEVLHANKEDLL  129
            D+MIA++D ++++QMD ILH+ ++QQLES+WRGL +LV+RT+F+ENIK+++++  K++ L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  130  DDFENAADITCSGIYKHVYTAGYGQFGGEPIAAMVGNYSFGPSSPDIKLLSYMASVGAMS  189
            +DFE  +DIT + +YK++Y++ YGQFGGEP++A++G+Y++ +S+PD+++LS M+S++AMS
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  190  HAPFLAAPSPEFFNLSSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTGPRFML  249
            HAPFL++ S+ FF L ++ ELP+++++K L+ GP+  KWR+FRE+ED++  +L   RF+ 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  250  RSAYHPQEKPIESFNYHENIAGQHDNYLWGNSTFLLASCINDSFARYRWCPNIIGPQSGG  309
            RS+Y+PQE+PI  FNY EN+   H++ LWGN+ + +A+ + DSFA YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  310  AVEDLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQ  369
            AV DLP  +YES+G  Q+KIPTEVLI+DR E+ELAE GFIA+T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  370  KPKNFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERRDLESELNK  429
            KPK FP+TPEG +A+TNY+LGTQLPY+F+V+RLAHY+KVLQRE+IGSWKER D+E+ LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  430  WIKQYVADQENPSADVRSRRPLRAAKVEVSDVAGDPGWYQVSLAVRPHFKYMGANFEISL  489
            W++QYV+DQENP+A+VRSRRP+R+AKV VS++ G++GWY+++L VRPHFK+MGANFE+SL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  490  VGRLDTQ  496
            VG+LD +
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  535 bits (2019),  Expect = 2e-153, Method: Compositional matrix adjust.
 Identities = 268/489 (55%), Positives = 410/489 (84%), Gaps = 0/489 (0%)

Query  8    TVAVETTTEPLSNATLLDQIMAETKLAPTQEGYQVARQGVSAFIAEILKSHDPDQLINKH  67
            + A   T  ++ + +++D IM  ++ +  +E+Y++A+ GV  FI+EI+K++ +++ INK 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  68   RVDQMIAELDRVLSKQMDAILHQPKFQQLESAWRSLKLLVDRTDFRENIKLEVLHVSKDD  127
             +D+MIA++D ++S+QMD ILH+ ++QQLES+WR+L +LV+RT+F+ENIK+++++V+K++
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  128  LLDDFENAADITCSGIYKHVYTAGYGQFGGEPVAAMVGNYSFGPSSPDIKLLSYMASVGA  187
             L+DFE  +DIT + +YK++Y++ YGQFGGEPV+A++G+Y++ +S+PD+++LS M+S++A
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  188  MAHAPFLAAPSPEFFNLSSFEELPNLKEIKDIFAGPRHAKWRAFRESEDARHTGLTGPRF  247
            M+HAPFL++ S+ FF L ++ ELP+++++K ++ GP+  KWR+FRE+ED++ +GL   RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  248  MLRSAYHPQENPVQSFTYDEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQS  307
            + RS+Y+PQENP++ F Y E++   H++ LWGN+ + +A+ + DSFA YRWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  308  GGAVEDLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANS  367
            GGAV DLP  +YES+G  Q+KIPTEVLI+DR E+ELAE GFIA+T+R+DS+NA FFSAN+
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  368  VQKPKNFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERKDLESEL  427
              KPK FP+TPEG +A+TNY+LGTQLPY+F+V+RLAHY+KVLQRE+IGSWKER D+E+ L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  428  NKWIRQYVADQENPSADVRSRRPLRAARVEVSDVAGDPGWYQVSLAVRPHFKYMGANFEI  487
            N W+RQYV+DQENP+A+VRSRRP+R+A+V VS++ G++GWY+++L VRPHFK+MGANFE+
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  488  SLVGRLDTQ  496
            SLVG+LD +
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  535 bits (2019),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 288/476 (61%), Positives = 407/476 (86%), Gaps = 0/476 (0%)

Query  17   LGILDRIIAETKLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVKKAMVDRMIAEIDAKL  76
            L+I+D I+  ++ + +DE+Y+IAK GV  FI E++K ++ ++ ++K  +D MIA+ID  +
Sbjct  15   LSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDII  74

Query  77   SRQMDEILHHPDFQALESSWRGLKLLVDRTNFRENIKLEILNASKQDLLDDFEDSPEIVQ  136
            SRQMDEILH+ ++Q LES+WRGL +LV+RTNF+ENIK+++++ +KQ+ L+DFE +P+I  
Sbjct  75   SRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITT  134

Query  137  SGLYKHIYTAEYGQFGGQPVGALIANYYFDPSAPDVKTLQYVASVACMSHAPFIASAGPK  196
            + LYK+IY++EYGQFGG+PVGA++++Y +++S+PD++ L  ++S+A MSHAPF++S ++ 
Sbjct  135  ATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAG  194

Query  197  FFGLETFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTVPRFLLRNPYDPEDNPV  256
            FFGL+ ++ LP ++DLK  +EGPQ+ KW++FRE+ED++Y GL V RFL R+PY+P++NP+
Sbjct  195  FFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPI  254

Query  257  KTFVYKENVANSHEHYLWGNTAYAFASRLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFE  316
            K F YKENV NSH+H LWGNT YAFA+RLTDSFA++RWC NIIGP++GGAV DLP   +E
Sbjct  255  KKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYE  314

Query  317  SMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDnaaffsansaQKPKFFGISEEG  376
            S G  ++KIPTEVL++DR EYELAE GFIA+T+R++S+NA FFSAN+A KPK+F  + EG
Sbjct  315  SFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEG  374

Query  377  KTAELNYKLGTQLPYMFIVNRLAHYLKVLQREQIGAWKERTDLELELNKWIRQYVADQEN  436
            K AE NY+LGTQLPY+F+V+RLAHYLKVLQRE+IG+WKER+D+E  LN W+RQYV+DQEN
Sbjct  375  KEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQEN  434

Query  437  PSSEVRSRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADFTLSLVGKLDKE  492
            P++EVRSRRP+R+A+V+VS++EGE+GWYR++LNVRPHFK+MGA+F LSLVGKLD+E
Sbjct  435  PPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  534 bits (2015),  Expect = 5e-153, Method: Compositional matrix adjust.
 Identities = 280/486 (58%), Positives = 407/486 (84%), Gaps = 0/486 (0%)

Query  6    GEQVTATLEPVNILDRIIAETKLTPQDEAYDIAKRGVSAFIEELLKSKSSAEPVKKALVD  65
            + +  +++  ++I+D I+  ++ + +DE+Y+IAK GV  FI E++K+ S+ + ++K  +D
Sbjct  5    SANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLD  64

Query  66   KMIAAIDEKLSRQVDEILHNTKFQQMESAWCGLKMVVDRTDFDQNIKLEILNVSKEDLLD  125
             MIA ID+ +SRQ+DEILHN ++QQ+ES+W GL  +V+RT+F++NIK+++++V+K++ L+
Sbjct  65   EMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALE  124

Query  126  DFEDASDITHSGLYKHIYTSEYGQFGGQPVGAIIANYAFGPSAPDVKILQYASSVAAMSH  185
            DFE  +DIT + LYK+IY+SEYGQFGG+PVGAI+++YA+ +S+PD+++L   SS+AAMSH
Sbjct  125  DFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSH  184

Query  186  APFISAAGPKFFGLESYEGLPNIKDLNDHFDGPQYTKWQSFRETEDSRYVGLTLPRFLLR  245
            APF+++ ++ FFGL++Y  LP+I+DL+  ++GPQY KW++FRE EDS+Y GL + RFL R
Sbjct  185  APFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTR  244

Query  246  QPYSPEDNPVKTFVYQEDVSATHEHYLWGNSAYAFATRLTESFAKYRWCPNIIGPRSGGA  305
             PY P++NP+K F Y+E+V  +H+H LWGN+ YAFATRLT+SFA+YRWC NIIGP++GGA
Sbjct  245  SPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGA  304

Query  306  VNDLPLHHFESMGEIETKIPTEVLVSDRREYQLAEQGFISLTMRKGSDnaaffsansaQK  365
            V+DLP   +ES G  ++KIPTEVL++DR EY+LAE GFI++T+R++S+NA FFSAN+A K
Sbjct  305  VKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALK  364

Query  366  PKFFGNSEEGKKAELNYKLGTQLPYMFVICRLAHYIKVLQREQIGSWKERTQLETELNKW  425
            PK+F N+ EGK AE NY+LGTQLPY+F++ RLAHY+KVLQRE+IGSWKER+++E  LN W
Sbjct  365  PKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEW  424

Query  426  LRQYIADQENPPAEVRSRRPLRAAQITVEDVDGEPGWYRVGIAVRPHFKFMGADFTLSLV  485
            +RQY++DQENPPAEVRSRRP+R+A++ V +++GE+GWYR+ + VRPHFKFMGA+F LSLV
Sbjct  425  MRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLV  484

Query  486  GKLDKE  491
            GKLD+E
Sbjct  485  GKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  534 bits (2015),  Expect = 5e-153, Method: Compositional matrix adjust.
 Identities = 279/490 (57%), Positives = 407/490 (84%), Gaps = 0/490 (0%)

Query  3    LNSETQEQQVSSSNVSLLDEIMAQSRMSPESEAYGIAKQGVAAFISNLFASQNEEEQINK  62
            +++ + + Q S  ++S++D IM  SR S E E+Y IAK GV  FI+++  +++ E++INK
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  63   LLIDKMLVELDNKLSTQVDQILHAPKFQELESSWRSLKLLVDRTDFRENIKINILHATKE  122
              +D M+ ++D+ +S Q+D+ILH  ++Q+LES+WR+L +LV+RT+F+ENIKIN+++ TK+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  123  ELLEDFEFSPEIVQSGFYQHVYSSGYGQFGGEPVAAVVGNYAFNNTTPDLKLMQYVSAVG  182
            E LEDFE +P+I  + +Y+++YSS YGQFGGEPV+A++G+YA+N +TPD++++  +S+++
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  183  AMAHAPFLSSVSPNFFGINSYAELPAIKDIKSVFEGPAHTKWRSLREAEDSRYLGLTAPR  242
            AM+HAPFL+S+S+ FFG+++YAELP I+D+K+++EGP   KWR++RE EDS+Y GL   R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  243  FLLRLPYSPTENPVKLFNYTENVKQDHDHYLWGNTAFLLASCINDSFAKYRWCPNIIGPQ  302
            FL R PY P ENP+K FNY ENV + H+H LWGNT + +A+ + DSFA+YRWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  303  SGGTVSDLPVHVFEAMGELQAKIPTEVLVTDRREFELAEEGFITLTMRKGSDNAAFFSAN  362
            +GG+V DLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  363  SVQKPKTFPNTHEGKIAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERE  422
            +  KPK FPNT EGK AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  423  LNIWLKQYIADQENPPADVRSKRPLRSAQIQVLDVEGDPGWYQVAIQVRPHFKYMGANFE  482
            LN W++QY++DQENPPA+VRS+RP+R+A++ V ++EG++GWY++ ++VRPHFK+MGANFE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  483  LSLVGRLDKE  492
            LSLVG+LD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 278/474 (59%), Positives = 399/474 (85%), Gaps = 0/474 (0%)

Query  20   LLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSA  79
            ++D IM  +R +  +++Y+IAK GV  FI+ I+ T++ E+ INK  +D MI ++D  +S 
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  80   QMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSG  139
            QMDEILH ++++++ES+WR+L +LV+RT+F+ENIKIN+ + TK+E LEDFE +P+I  + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  140  FYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFF  199
            +YK++YSS YGQFGGEP +AI+G+YA+N S+PDM++L  +S+++AM+HAPFL+S++++FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  200  GISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTTPRFLLRLPYSTVENPIKN  259
            G+ +++ELP I+DLK+++EGP   KWR++RE+EDS+Y GL   RFL R PY   ENPIK+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  260  FNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAM  319
            FNY E+V  +H+H+LWGNT + +A+ LTDSFA+YRWC NIIGP++GG+V DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  320  GQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKM  379
            G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  KPK+FPNT EGK 
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  380  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPP  439
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  440  TDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGASFELSLVGRLDKE  493
            ++VRSRRP+R+A++ V ++EG++GWY++ ++VRPHFK+MGA+FELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  529 bits (1997),  Expect = 1e-151, Method: Compositional matrix adjust.
 Identities = 258/488 (53%), Positives = 402/488 (83%), Gaps = 1/488 (0%)

Query  7    AQQDSTQPAVQAEGSLIDQLIESTRIRPDDDAYSMTRQGLEAFVAELLEPSRAKEKVSQG  66
            +   +TQ +++ E S+ID +++++R   +D++Y++++ G+  F++E++    A +K+++ 
Sbjct  3    GASANTQTSIK-ELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  67   MIDEMIAGLDRKLCQQVDAIMHEESFQKMESSWRSLKFLVDRTDFRENNRIEILNVSKED  126
             +DEMIA +D  + +Q+D I+H+E +Q++ES+WR+L FLV+RT+F+EN +I++++V+K++
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  127  LLADFEDAPDITRSGLYKAVYTAEFGQFGGEPIGTIIGNYDFGPGGQDIKLLQSIASVSA  186
             L DFE  PDIT + LYK +Y++E+GQFGGEP+G+I+G+Y + ++  D+++L  ++S++A
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  187  MAHAPFIAAAGPQFFGLDSYSDLANLKDLSAVFEGPQYTKWNAFRESEDARFVGLTMPNF  246
            M+HAPF+++ ++ FFGLD+Y++L++++DL A++EGPQY KW +FRE+ED+++ GL +  F
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  247  LLRVPYGDETVPTKKFRYNEDVGGGNKDFLWGNAAFAFASRLSESFAQYRWCANIIGPQG  306
            L R PY  +  P KKF Y+E+V  +++++LWGN+ +AFA+RL++SFA+YRWC+NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  307  GGTVGDLPVYNYEAMGEAQVKIPTEVLISERREFELAEQGFISLTMRKNTDNAAFFSANS  366
            GG+V DLP Y YE+ G +Q KIPTEVLI++R E+ELAE GFI++T+R++++NA FFSAN+
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  367  VQKPKFFGNNPEGKQAELNYKLGTQLPYIFVVSRLAHYIKVIQRENIGTWKERNDLETEL  426
              KPK+F N PEGK+AE NY+LGTQLPYIF+VSRLAHY+KV+QRE+IG+WKER D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  427  NTWIRQYVADMDNPAAGVRSRRPLRQAEVTVSDVEGDPGWYRVGLKVRPHFKYMGASFTL  486
            N W+RQYV+D +NP+A VRSRRP+R A V VS++EG++GWYR+ L+VRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  487  SLVGKLDK  494
            SLVGKLD+
Sbjct  482  SLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  527 bits (1988),  Expect = 7e-151, Method: Compositional matrix adjust.
 Identities = 273/488 (56%), Positives = 398/488 (82%), Gaps = 0/488 (0%)

Query  6    TEASVSTPSVAGPSLLDEIMAQTRFKPESESYGIARQGVTAFITALLQNDDEAESVDILA  65
              ++ +  S+   S++D IM  +R+  E ESY IA+ GV  FIT +++ D   + ++  +
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  66   VNAMIADIDTRVGHQMDLILHAPEFQELESFLRSLKLLVDRADPRENIKIHLMHATKEEL  125
            ++ MIA+ID  +++QMD ILH  ++Q+LES  R+L +LV+R++ +ENIKI+L + TK+E 
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  126  LDDFEFSPEITQSGLYRHVYSSGFGQFGGEPFAAVIGNYAFDNSAADMKLLKYISAVSAM  185
            L+DFE +P+IT + LY+++YSS +GQFGGEP +A++G+YA++ S++DM++L  +S+++AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  186  AHSPFLSSVSPEFFGLESFTELPAIKDLAAIFEGPGYTKWRSLRESDDSRNLGLTAPRFL  245
            +H+PFL+S+S+ FFGL++++ELP I+DL A++EGP Y KWR++RE++DS+  GL   RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  246  LRHPYAPYENPVKSFNYHEDVSQSHENYLWGNTAFLLAANMVESFISTRWCPNIIGPQSG  305
             R PY P ENP+K FNY E+V +SH++ LWGNT + +A+ + +SF + RWC NIIGP++G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  306  GAVKDLPVHMYEAMGQLQSKIPTEILITDRREYELAEQGFITLTMRKNSDNAAFFSANSI  365
            GAVKDLP  +YE+ G  QSKIPTE+LITDR EYELAE GFI++T+R++S+NA FFSAN+ 
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  366  QKPKVFPNSPEGKSAETNYKLGTQLPYLFIISRIAHYLKVLQREQIGSWKERSDVERGLN  425
             KPK+FPN+PEGK AETNY+LGTQLPY+F++SR+AHYLKVLQRE+IGSWKER+D+E GLN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  426  TWIHQLVADQENPPSEVRSRKPLRQAKVEVTDVEGEPGWYRIKLAARPHFKYMGSDFDLT  485
             W++Q V+DQENPP+EVRSR+P+R AKV V+++EGE+GWYRI+L  RPHFK+MG++F+L+
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  486  LVGRLDKD  493
            LVG+LD++
Sbjct  483  LVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  525 bits (1982),  Expect = 2e-150, Method: Compositional matrix adjust.
 Identities = 281/475 (60%), Positives = 403/475 (85%), Gaps = 0/475 (0%)

Query  18   SILDNIISQTLLSADDEAYGIAKRGVSAFIAELVKPHNCDEPVKKRLVDRMIAEIDTKLS  77
            SI+D+I+  +  S +DE+Y IAK GV  FI+E+VK ++ ++ ++K  +D MIA+ID  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   EQMDEILHHPDFQALEASWRGLQLLVDRTNFRENIKIELLNVSRedllddfedsseITQS  137
             QMDEILH+ ++Q LE++WRGL +LV+RTNF+ENIKI+L++V++++ L+DFE +++IT +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKHVYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSVAGMAHAPFIAAAGPSF  197
             LYK++YS+EYGQFGG+PVGAI+++Y L++S+PD++++   SS+A+M+HAPF+++ +++F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGLESFTGLPDLKDLRDHFEGPQFAKWQSFRQSEDARYIGLTVPRFLLRTPYDPLECPVK  257
            FGL++++ LP ++DL+  +EGPQ+ KW++FR++ED++Y GL V RFL R+PY+P E P+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  TFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGPQSGGAVEDLPLHHFQS  317
             F Y+ENV NSH+H LWGNT YAFATRLTDSFA +RWC NIIGP++GGAV DLP   ++S
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGEIETKIPTEVLISDRREYELAQEGFIALTMRKGSDNAAFFSASSVQKPKSFGISEEGK  377
             G  ++KIPTEVLI+DR EYELA+ GFIA+T+R++S+NA FFSA++  KPK F  + EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  AAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGAWKERTDLELELNKWVRQYVADQENP  437
             AE NYRLGTQLPY+ +V+RLAHYLKVLQRE++G+WKER+D+E  LN W+RQYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  SAEVRGRRPLRAARIVVSDVEGEPGWYRVNVTVRPHFKYMGADFTLSLVGKLDKE  492
            +AEVR+RRP+R+A+++VS++EGE+GWYR+N+ VRPHFK+MGA+F LSLVGKLD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  525 bits (1980),  Expect = 3e-150, Method: Compositional matrix adjust.
 Identities = 262/490 (54%), Positives = 408/490 (84%), Gaps = 1/490 (0%)

Query  6    TTVTVETQAETLSNATLLDQIMAETKLVPTQEGYQVARQGVSAFIAEILKSHDPDQLINK  65
            +  + +TQ+ ++ + +++D IM  ++    +E+Y++A+ GV  FI+EI+K++ +++ INK
Sbjct  2    SGASANTQT-SIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  66   HRVDQMIAELDRVLSKQMDAILHEPAFQQLESAWRSLKLLVDRTDFRENIKLEVLHVSKE  125
              +D+MIA++D ++S+QMD ILH+  +QQLES+WR+L +LV+RT+F+ENIK+++++V+K+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  126  DLLDDFENAADITCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSYMASVG  185
            + L+DFE  +DIT + +YK++Y++ YGQFGGEPV+A++G+Y + +S+PD+++LS M+S++
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  186  AMSHAPFIAAPSPEFFNLSSFEALPNLKEIKDIFAGPRHAKWRAFRESEDARHIALTGPR  245
            AMSHAPF+++ S+ FF L ++  LP+++++K ++ GP+  KWR+FRE+ED++  +L   R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  246  FMLRSAYHHQDQPISSFHYDENINGRHDNYLWGSSAFLLASCINDSFARYRWCPNIIGPQ  305
            F+ RS+Y+ Q++PI  F+Y EN++  H++ LWG++ + +A+ + DSFA YRWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  306  SGGAVEGLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSAN  365
            +GGAV +LP  +YES+G  Q+KIPTEVLI+DR E+ELAE GFIA+T+R+DS+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  366  SVQKPKNFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERRDLESE  425
            +  KPK FP+TPEG +A+TNY+LGTQLPY+F+V+RLAHY+KVLQRE+IGSWKER D+E+ 
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  426  LNKWIKQYVADQENPSADVRSRRPLRAARVEVSDVAGDPGWYQVSLAVRPHFKYMGANFE  485
            LN W++QYV+DQENP+A+VRSRRP+R+A+V VS++ G++GWY+++L VRPHFK+MGANFE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  486  ISLVGRLDTQ  495
            +SLVG+LD +
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  524 bits (1977),  Expect = 5e-150, Method: Compositional matrix adjust.
 Identities = 260/473 (55%), Positives = 393/473 (84%), Gaps = 0/473 (0%)

Query  22   LIDQLIESTRVKPGDDAYSITRQGLEAFVAELLEPSRAQEKVSQGLIDEMIAGLDRKLCR  81
            +ID +++++R    D++Y+I++ G+  F++E++    A++K+++  +DEMIA +D  + R
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  82   QVDAIMHQEQFQKLESAWRSLKFLVDRTDFRENNRIEILNVSKQALLEDFEDASDITRSG  141
            Q+D I+H+EQ+Q+LES+WR+L FLV+RT+F+EN +I++++V+KQ  LEDFE  +DIT + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  142  LYKAVYTAEFGQFGGEPFGTIIGNYEFGPGGQDVKLLQSVASVAAMAHTPFIASAGPQFF  201
            LYK +Y++E+GQFGGEP G+I+G+Y + ++  D+++L  ++S+AAM+H+PF++S ++ FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  202  GMDSYAGLPNLKDLAAVFEGPQYTKWNAFRQTEDARFVGLTLPNFLLRVPYGDDTVPTKQ  261
            G+D+YA LP+++DL A++EGPQY KW +FR+ ED+++ GL +  FL R PY  +  P K+
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  262  FRYNEDVSGGSKDFLWGNAAFAFASRLSESFAQYRWCANIIGPQGGGTVGDLPVYNYEAM  321
            F Y+E+V  + +++LWGN+ +AFA+RL++SFA+YRWC+NIIGP++GG+V DLP Y YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  322  GETQTKIPTEVLISERREFELAEQGFIALTMRKNTDNAAFFSANSVQKPKFFGNNKEGKE  381
            G TQ+KIPTEVLI++R E+ELAE GFIA+T+R++++NA FFSAN+  KPK+F N  EGKE
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  382  AELNYKLGTQLPYIFIVSRLAHYIKVIQRENIGTWKERTDLESELNNWIRQYVADMDNPA  441
            AE NY+LGTQLPYIF+VSRLAHY+KV+QRE+IG+WKER+D+E+ LN+W+RQYV+D +NP+
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  442  AGVRSRRPLRQAEITVSDVEGDPGWYRVGLKVRPHFKYMGASFTLSLVGKLDK  494
            A VRSRRP+R A + VS++EG++GWYR+ L+VRPHFK+MGA+F LSLVGKLD+
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  523 bits (1973),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 277/487 (57%), Positives = 398/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYHEDVSRNHEDYLWGNTAWMLACNVADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V  +H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAARVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+A+V V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  523 bits (1973),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 277/487 (57%), Positives = 398/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYHEDVSRNHEDYLWGNTAWMLACNVADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V  +H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAARVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+A+V V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  523 bits (1973),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 267/475 (57%), Positives = 388/475 (82%), Gaps = 0/475 (0%)

Query  18   SLLEEIVQATKLQPADEAYSITKKGVEALITQLLEPGTETPKVSKAVLDDMIAEIDKKLS  77
            S+++ I+Q+++    DE+Y+I+K GV  +IT+++  ++   K++K  LD+MIA+ID  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   RQMDEILHNTQFQKLESSWRSLHFLVDRTDFRENNRIEIMNATKDELLDDFEDAPEVAKS  137
            RQMDEILHN Q+Q+LES+WR+L FLV+RT+F+EN +I++ + TK+E L+DFE  P+++ +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GLYKTVYSAEYGQFGGKPYGAIIGNYDFGPGPQDIKLLQSLAAVSGMAHAPFIAAASPQF  197
             LYK +YS+EYGQFGG P GAI+G+Y + ++  D+++L  ++++++M+HAPF+++ S+ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGCDDYTALPNLKDIKSILEGPQYAKWQSFRESEDARYVGLALPRFLLRLPYGEATKPVK  257
            FG D+Y+ LP+++D+K++LEGPQY KW++FRE+ED++Y GL + RFL R PY    +P+K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFNYEESVSAGHDRYCWGNAAFSFATRLTESFANFRWCANIIGPQGGGAVHDLPLHQYEA  317
             FNY E+V  +H++  WGN+ ++FATRLT+SFAN+RWC+NIIGP++GGAV DLP   YE+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGAIQTKIPTEVLVSERREFELAEEGFIALTMRKGSDNAAFFSANSVQKPKYFGTSKEGK  377
             G+ Q+KIPTEVL+++R E+ELAE GFIA+T+R++S+NA FFSAN+  KPK F  + EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAELNYKLGLQLPYMFIVSRLAHYLKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNP  437
            EAE NY+LG QLPY+F+VSRLAHYLKV+QRE+IG+WKER+D+EN LN W+RQYVS+ +NP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  MPGVRSRRPLRQAQVTVEEVPGEPGWYRVGLKVTPHFKYMGAYFTLSLVGKLDKE  492
             + VRSRRP+R A+V V E+ GE+GWYR+ L+V PHFK+MGA F LSLVGKLD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  523 bits (1975),  Expect = 8e-150, Method: Compositional matrix adjust.
 Identities = 265/490 (55%), Positives = 401/490 (82%), Gaps = 0/490 (0%)

Query  6    LKQAKPEASTAGGEPSLLDEIVQATKVKPSDESYSATRVGVQAFIDELLKPGREGIRVTQ  65
            +  A +++ T+  E S++D I+Q+++    DESY+ +++GV  FI E++K +    ++ +
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  66   AVITEMIANIDQKLSTQVDAILHDSQFQKLESAWRGLKFLVERTDFRENIKISMVNLSKE  125
              + EMIA+ID+ +S Q+D ILH+ Q+Q+LES+WRGL FLVERT+F+ENIKI++ +++K+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  126  DLLADFEDAPELTKSGLYKMLYTAEYGQFGGQPYGAMVANYEFGPGPRDISLLQSVAATS  185
            + L DFE  P++T + LYK +Y++EYGQFGG+P GA++++Y + ++  D+++L  +++ +
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  186  AMAHAPFIAAAGESFFGVDSFEQLPNLKDLKSVFEGPQHAKWRGFRESEDSRNVGLVLPR  245
            AM+HAPF+++ + +FFG+D++ +LP+++DLK+++EGPQ  KWR FRE+EDS+  GL++ R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  246  FLLRLPYGPETIPSKNFEYRENVSAGDTSFLWGNAAFAFASCLTDSFAKYRWCANVIGPQ  305
            FL R PY P+  P K+F+Y+ENV  ++  +LWGN+ +AFA+ LTDSFA+YRWC+N+IGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  306  GGGAVYDLPVYTYEAMGATQAKIPTQTLISERREFELAEEGFIALAMRKGSDNAAFFSAN  365
            +GGAV DLP Y YE+ G+TQ+KIPT+ LI++R E+ELAE GFIA+++R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  366  SCQKPKFFGNTKEGKEAETNYKLGTQLPYMFVISRLTHYIKVLQRENIGTWKQRTDLETE  425
            +  KPK+F NT EGKEAETNY+LGTQLPY+F++SRL+HY+KVLQRE+IG+WK+R+D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  426  LNNWIRQYVADQESPSAGVRSRRPLRRAEISVNDIPGDPGWYGVTLKVMPHFKYMGANFE  485
            LN+W+RQYV+DQE+P+A VRSRRP+R A + V++I G++GWY + L+V PHFK+MGANFE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  486  LSLVGKLDKE  495
            LSLVGKLD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  522 bits (1971),  Expect = 2e-149, Method: Compositional matrix adjust.
 Identities = 266/475 (56%), Positives = 393/475 (83%), Gaps = 0/475 (0%)

Query  17   SLLDDIVSHTKLNKNDDSYNVVKNGVEALIQELINTDDSEERVNKSVIDKMIAELDRKIS  76
            S++D I+  ++ +K+D+SYN+ K GV  +I E+++TD +E+++NK  +D MIA++D  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  77   TQMDEIIHNKNFQELESRWRGLYLLIERTDFRQNILMEILNVSKEELMEDFEDCLDITQS  136
             QMDEI+HN ++Q+LES WRGLY+L+ERT+F++NI +++++V+K+E +EDFE   DIT +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  137  GLYKHIYTSGYGQHGGQPVGTIVADYELSPSNYDIKFLNKVSSIAAMSHAPFIAAAGPKF  196
             LYK+IY+S YGQ GG+PVG+I++DY L++S  D++FL+K+SSIAAMSHAPF+++ ++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  197  FGLDSFEGLPDLKDLEDIINSPQFTAWRGFRQNEDSKYVGLTLPRFLLRAPYDPEDNPIL  256
            FGLD++  LP ++DL  ++++PQ+  WR FR+NEDSKY GL + RFL R+PY+P++NPI 
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  257  NFSYKEDVSASHENYLWGNTVYAFASRLTESFASYRWCTNIIGPTSGGEVKNLPVHTFES  316
            +F+YKE+V  SH++ LWGNT+YAFA+RLT+SFA+YRWC NIIGP +GG VK+LP   +ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  317  MGDIEMKIPTEVLISDRREYELSEQGFIPLVMRKGNNSATFFAASSVQIPKIFPDTEEGQ  376
             G  + KIPTEVLI+DR EYEL+E GFI++ +R+++N+A FF+A++   PKIFP+T EG+
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  377  IAQLNYKLGTQLPYLFAITRMSHYIKVLQREYIGSFRERADLERELNKWAKQYIANQENP  436
             A+ NY+LGTQLPY+F ++R++HY+KVLQRE IGS +ERAD+E  LN W +QY+++QENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  437  SSEIRSKRPFKNMLIEVSDIVGDPGWYKVRIALRPHFKYMGANFELSLVGKLEKE  491
            ++E+RS+RPF+   + VS+I G++GWY++ + +RPHFK+MGANFELSLVGKL++E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  522 bits (1968),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 283/489 (58%), Positives = 410/489 (84%), Gaps = 0/489 (0%)

Query  3    TQATSLAAPRADESSILDNIIAQTLLTADDEAYGIAKRGVSAFIEELVKPHNSAEPVKKR  62
            + A++ +     E SI+D+I+  +  + +DE+Y IAK GV  FI E+VK +++ + ++K 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  63   LVDRMIAEIDSKLSRQMDEILHHPQFQALEAAWRGLQLLIERTNFRENIKIELLNVSRAD  122
             +D MIA+ID  +SRQMDEILH+ Q+Q LE++WRGL +L+ERTNF+ENIKI+L++V++ +
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  123  LLDDFEDSPEVNQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYVSTVAC  182
             L+DFE +P++  + LYK+IYS+EYGQFGG+PVGAI+++Y L++S+PD++++  +S++A 
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  183  VahapfiaaagpaffgLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVPRF  242
            ++HAPF+++ +++FFGL++++ LP ++DLK  +EGPQ+ KW++FR++ED++Y GL V RF
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  243  LLRTPYDPLESPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGPQS  302
            L R+PY+P E+P+K F Y+ENV NSH+H LWGNT YAFATRLTDSFA +RWC NIIGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  303  GGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSASS  362
            GGAV DLP   ++S G  ++KIPTEVL++DR EYELA+ GFIA+T+R++S+NA FFSA++
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  363  VQKPKYFGTSVEGREAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLELEL  422
              KPK F  + EG+EAE NYRLGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  423  NKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADFTL  482
            N W+RQYV+DQENP+AEVR+RRP+R+A+++VS+++GE+GWYR+NL+VRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  483  SLVGKLDKE  491
            SLVGKLD+E
Sbjct  482  SLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1966),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 399/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1964),  Expect = 5e-149, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLVV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK  +
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1965),  Expect = 5e-149, Method: Compositional matrix adjust.
 Identities = 260/485 (54%), Positives = 394/485 (82%), Gaps = 0/485 (0%)

Query  9    STAAPTTTDEPSLLDQIMEQTRLRPVDEGYDLAKRGIEAFVSELMKPTRKDEKVNNAIVD  68
            S+ + T+  E S++D IM+ +R    DE+Y++AK G+  F++E++K    ++K+N+  +D
Sbjct  5    SANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLD  64

Query  69   QMIAEIDAKLGRQIDTILHDDGFQKLETAWRGLKFLVDRTDFRENIKIEVLSATKDELRE  128
            +MIA+ID  ++RQ+D ILH++ +Q+LE++WRGL FLV+RT+F+ENIKI+++  TK+E  E
Sbjct  65   EMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALE  124

Query  129  DFEDAPEIAKSGLYKQVYVSEYGQFGGQPIGAVITNFEYSPNAADVKLMQNMAAVGAMSH  188
            DFE  P+I+ + LYK++Y SEYGQFGG+P+GA++ ++  +++++D++++ +M++++AMSH
Sbjct  125  DFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSH  184

Query  189  TPVIGAAGPQFFGNDSYEALPNLKDLQSIFDSPSYAKWNSFRESEDSRYFGLTLPRFLLR  248
            +P + + ++ FFG D+Y  LP+++DL++++++P Y KW +FRE+EDS+Y GL + RFL R
Sbjct  185  APFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTR  244

Query  249  LPYGPQSTPIKSFNYQESASTDSKDYCWGNAAFAFATRLSESFAKYRWCPNIIGPQSGGV  308
             PY PQ  PIK FNY+E+     ++  WGN+ +AFATRL++SFA+YRWC NIIGP++GG 
Sbjct  245  SPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGA  304

Query  309  VEDLPLHRFDAMGQTETKIPTEILISDRREYELAEQGFIALTMRKGSDNAAFFSANSVQK  368
            V DLP   +++ G T++KIPTE+LI+DR EYELAE GFIA+T+R++S+NA FFSAN+  K
Sbjct  305  VKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALK  364

Query  369  PKSFGSSKEGKEAELNYKLGTQLPYLFIINRLAHYIKVLQRENIGSWKQRGELETELNNW  428
            PK F ++ EGKEAE NY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWK+R+++E  LN+W
Sbjct  365  PKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEW  424

Query  429  IRDYVSDQDNPTAEVRSRRPLRRAKIVVEEVEGDVGWYRVNLKVQPHFKHMGADFTLNLT  488
            +R+YVSDQ+NP AEVRSRRP+R AK++V E+EG+ GWYR+NL+V+PHFK MGA+F L+L 
Sbjct  425  MRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLV  484

Query  489  GKLDK  493
            GKLD+
Sbjct  485  GKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1964),  Expect = 6e-149, Method: Compositional matrix adjust.
 Identities = 276/487 (57%), Positives = 397/487 (82%), Gaps = 4/487 (0%)

Query  9    VSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +  S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPWSPADNPVKSFNYHEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R P  P +NP+K FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAARVEVMDVEGEPGWYQVALSVRPHFKFMGANFELSL  484
            W+RQYV+DQENPPA+VRSR+P+R+A+V V ++EGE+GWY++ L+VRPHFKFMGANFELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDRE  491
            VG+LDRE
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  521 bits (1964),  Expect = 6e-149, Method: Compositional matrix adjust.
 Identities = 255/474 (54%), Positives = 395/474 (84%), Gaps = 0/474 (0%)

Query  23   SLIDDLVEATRLKPGDEAYSITRQGVKAFINELLEPQRAVEKVTQATVDEMIAELDKKLC  82
            S+ID +++++R    DE+Y+I++ GV  FI E++  + A +K+ + T+DEMIA++D  + 
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  83   HQVDAILHNAEFQKMESAWRSLKFLVDRTDFRENNKIEILNVSKQKLLEDFEDAPEITKS  142
            +Q+D ILHN ++Q++ES+WR+L FLV+RT+F+EN KI++++V+KQ  LEDFE  P+IT +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  143  GLYKIAYTNEFGQFGGQPYGTIIANYEMNPGPQDIKLLQNIASVATMAHAPFIAAAGPEF  202
             LYK  Y++E+GQFGG+P G+I+++Y +N++  D+++L +++S+A+M+HAPF+++ ++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  203  FGVDDFSKLPNLKDLASIYEMPQFTKWNSFRESDDSRFVGLTVPRFMLRLPYGQGTVPSK  262
            FG+D+++ LP+++DL ++ E PQ+ KW +FRE++DS++ GL V RF+ R PY     P K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  263  KFNYQEDVSGGNSSFLWGNASFAFASRLSESFAKYRWNTNIIGPQGGGAVTNLPIYNFEA  322
            KFNY+E+V  +++ +LWGN+ +AFA+RL++SFA+YRW  NIIGP++GGAV +LP Y +E+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  323  MGEVQSKIPTEILVSERREFELAEQGFIGLTMRKNSDNAAFFSANSTQKAKIFAQTKEGK  382
             G  QSKIPTE+L+++R E+ELAE GFI++T+R++S+NA FFSAN++ K+KIF++T EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  383  EAELNYKLGTQLPYIFVVSRLAHYIKIIQRENIGTWKERGDLETELNNWIRQYVSDMDNP  442
            EAE NY+LGTQLPYIF+VSRLAHY+K++QRE+IG+WKER+D+E  LN+W+RQYVSD +NP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  443  APGVRSRRPLRQAEIVVSDVDGDPGWYRVSLKVRPHFKYMGASFTLSLVGKLDK  496
            ++ VRSRRP+R A ++VS+++G++GWYR++L+VRPHFK+MGA+F LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  520 bits (1960),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 266/488 (55%), Positives = 409/488 (84%), Gaps = 3/488 (0%)

Query  10   TAAAPEADASI---SLLDQLIESARIKPGDEAYSITRQGIQAFIGQLLEPQNAVERITQA  66
            ++A++++++SI   S++D +++++R    DE+Y+I++ G+  FI +++  ++A ++I + 
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKY  61

Query  67   TVDSMIADLDQKLCAQVDAILHHADLQKMESAWRSLKFLVDRTNFRENVKIQLLSVSKGK  126
            T+D MIA++D+ +  Q+D ILH+ ++Q++ES+WR+L FLV+RTNF+EN+KI+L+ V+K  
Sbjct  62   TLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQE  121

Query  127  LLEDFEDSADITKSGLYKNLYTAEYGQFGGQPFGAIVANYEFGPGTQDVKLLQSVASVSA  186
             LEDFE ++DIT + LYK +Y++EYGQFGG+P GAI+++Y + ++T D+++L  ++S++A
Sbjct  122  ALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAA  181

Query  187  MSHAPFIAAAGPHFFGVDTYDQLPNLKDLSSIFEGPQFVKWNAFRESEDARYVGLTLPHF  246
            MSHAPF+++ ++ FFG+D Y +LP+++DL +++EGPQ+VKW +FRE+ED++Y GL + +F
Sbjct  182  MSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRF  241

Query  247  LLRVPYGADTVPAKKFNYKEDVSGGNKQFLWGNAAFAFASRLTSSFADYRWCANVIGPQG  306
            L R PY ++  P KKFNYKE+V  +++++LWGN+ +AFA+RLT SFA+YRWC+N+IGP++
Sbjct  242  LTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKA  301

Query  307  GGTVGDLPVYTYESMGELQNKIPTEVLISERREFELAEQGFIALTMRKNSDnaaffsans  366
            GG+V DLP Y YES G  Q+KIPTEVLI++R E+ELAE GFIA+T+R++S+NA FFSAN+
Sbjct  302  GGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANA  361

Query  367  aQKPKFFGNTKEGKEAELNYKLSTQLPYMFVVSRLAHYIKVIQRENIGTWKERVDLESEL  426
            A KPK+F NT EGKEAE NY+L+TQLPY+F+VSRLAHY+KV+QRE+IG+WKER D+E+ L
Sbjct  362  ALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGL  421

Query  427  NTWIRQYVADMDNPAEGVRSRRPLRQAEIVVADVEGDPGWYRVDLKVRPHFKYMGASFTL  486
            N W+RQYV+D +NP+  VRSRRP+R A ++V+++EG++GWYR++L+VRPHFK+MGA+F L
Sbjct  422  NEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFEL  481

Query  487  SLVGKLDK  494
            SLVGKLD+
Sbjct  482  SLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  520 bits (1963),  Expect = 7e-149, Method: Compositional matrix adjust.
 Identities = 279/486 (58%), Positives = 395/486 (82%), Gaps = 4/486 (0%)

Query  9    VSTRTEQGSHAPSLLDEIMAQTRIQPGADGYDIARQGVTAFIASLLQSTSPAEPVNKLAV  68
             S+ T+ +    S++D IM  +R     ++Y+IA+ GV  FI+ ++++ S+ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDARISRQMDAIIHAPQFQQLESFWRSMKALVDRVDFRENIKVHVLHVTKAELL  128
            D MIA+ID  ISRQMD I+H  Q+QQLES WR++  LV+R +F+ENIK+++++VTK E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEITQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTTPDMKLLNYVSAVGAMA  188
            EDFE  P+IT + +YK++YSS +GQFGGEP++A+LG Y ++ +TPDM++L+ +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLKSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL + +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSATENPIKSFNYAEDVSHSHEHYLWGNTAWMLASNIADSFAKYRWAPNIIGPQSGG  308
            R PY + ENPIK FNY E+V +SH+H LWGNT   +A+ ++DSFA+YRW  NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLYESMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKNSDNAAFFSANSVQ  368
            AVKDLP  +YES G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNI  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WVRQYVADQENPPADVRSRKPLRGAKVEVLDVDGEPGWYQVAISARPHFKYMGASFELSL  484
            W+RQYV+DQENPPA+VRSR+P+RGAKV V +++GE+GWY++ ++ RPHFK+MGA+FELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDK  490
            VG+LD+
Sbjct  484  VGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  520 bits (1962),  Expect = 8e-149, Method: Compositional matrix adjust.
 Identities = 279/486 (58%), Positives = 395/486 (82%), Gaps = 4/486 (0%)

Query  9    VSTRTEQGSHAPSLLDEIMAQTRIQPGADGYDIARQGVTAFIASLLQSTSSAEPVNKLAV  68
             S+ T+ +    S++D IM  +R     ++Y+IA+ GV  FI+ ++++ S+ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDARISRQMDAIIHAPQFQQLESFWRSMKALVDRVDFRENIKVHVLHVTKAELL  128
            D MIA+ID  ISRQMD I+H  Q+QQLES WR++  LV+R +F+ENIK+++++VTK E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEITQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTTPDMKLLNYVSAVGAMA  188
            EDFE  P+IT + +YK++YSS +GQFGGEP++A+LG Y ++ +TPDM++L+ +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLKSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL + +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSATENPIKSFNYAEDVSHSHEHYLWGNTAWMLASNIADSFAKYRWAPNIIGPQSGG  308
            R PY + ENPIK FNY E+V +SH+H LWGNT   +A+ ++DSFA+YRW  NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLYESMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKNSDNAAFFSANSVQ  368
            AVKDLP  +YES G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNI  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WVRQYVADQENPPADVRSRKPLRGAKVEVLDVDGEPGWYQVAISARPHFKYMGASFELSL  484
            W+RQYV+DQENPPA+VRSR+P+RGAKV V +++GE+GWY++ ++ RPHFK+MGA+FELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDK  490
            VG+LD+
Sbjct  484  VGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  519 bits (1959),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 286/480 (60%), Positives = 405/480 (85%), Gaps = 0/480 (0%)

Query  12   TADEYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVKKRLVDRMIAEI  71
            +  E SI+D+I+  +  S +DE+Y IAK GV  FI E++K ++  + ++K  +D MIA+I
Sbjct  11   SIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHI  70

Query  72   DTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTDFRENIKIELLNVSRQDLLEDFEDSP  131
            D  +S QMDEILH+ ++Q LE++W+GL +LV+RT+F+ENIKI+L++V++Q+ LEDFE +P
Sbjct  71   DDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANP  130

Query  132  EVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSVACMahapfiaa  191
            ++T + LYK+IYS+EYGQFGG+PVGAI+++Y L++S+PD++++   SS+A M+HAPF+++
Sbjct  131  DITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTS  190

Query  192  aapaffGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVPRFLLRTPYDPL  251
             +++FFGL++++ LP ++DLK  +EGPQ+ KW++FR++ED++Y GL V RFL R+PY+P 
Sbjct  191  MSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQ  250

Query  252  ECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGPQSGGAVEDLPL  311
            E P+K F Y+ENV NSH+H LWGNT YAFATRLTDSFA +RWC NIIGP++GGAV DLP 
Sbjct  251  ENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPT  310

Query  312  HHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSASSVQKPKHFGL  371
              ++S G  ++KIPTEVL++DR EYELA+ GFIA+T+R++S+NA FFSA++  KPK F  
Sbjct  311  YIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPN  370

Query  372  SPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLELELNKWIRQYVA  431
            +PEGKEAE NYRLGTQLPY+ +V+RLAHYLKVLQRE++GSWKER+D+E  LN W+RQYV+
Sbjct  371  TPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVS  430

Query  432  DQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGADFTLSLVGKLDKE  491
            DQENP+AEVR+RRP+R+A+++VS++EGE+GWYR+NL+VRPHFK+MGA+F LSLVGKLD+E
Sbjct  431  DQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  519 bits (1959),  Expect = 2e-148, Method: Compositional matrix adjust.
 Identities = 279/486 (58%), Positives = 395/486 (82%), Gaps = 4/486 (0%)

Query  9    VSTRTEQGSHAPSLLDEIMAQTRIQPGADGYDIARQGVTAFVASLLQSTSPAEPVNKLAV  68
             S+ T+ +    S++D IM  +R     ++Y+IA+ GV  F++ ++++ S+ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDVRISRQMDAIIHAPQFQQLESFWRSMKALVDRVDFRENIKVHVLHVTKAELL  128
            D MIA+ID  ISRQMD I+H  Q+QQLES WR++  LV+R +F+ENIK+++++VTK E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEITQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTTPDMKLLNYVSAVGAMA  188
            EDFE  P+IT + +YK++YSS +GQFGGEP++A+LG Y ++ +TPDM++L+ +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLKSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL + +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSATENPIKSFNYAENVSHSHEHYLWGNTAWMLASNIADSFAKYRWAPNIIGPQSGG  308
            R PY + ENPIK FNY ENV +SH+H LWGNT   +A+ ++DSFA+YRW  NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLYESMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKNSDNAAFFSANSVQ  368
            AVKDLP  +YES G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNI  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WVRQYVADQENPPADVRSRKPLRGAKVEVLDVDGEPGWYQVAISARPHFKYMGASFELSL  484
            W+RQYV+DQENPPA+VRSR+P+RGAKV V +++GE+GWY++ ++ RPHFK+MGA+FELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDK  490
            VG+LD+
Sbjct  484  VGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  518 bits (1954),  Expect = 3e-148, Method: Compositional matrix adjust.
 Identities = 279/486 (58%), Positives = 394/486 (82%), Gaps = 4/486 (0%)

Query  9    VSTRTEQGSHAPSLLDEIMAQTRIQPGADGYDIARQGVTAFIASLLQSTSPAEPVNKLAV  68
             S+ T+ +    S++D IM  +R     ++Y+IA+ GV  FI+ ++++ S+ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDARISRQMDAIIHAPQFQQLESFWRSMKALVDRVDFRENIKVHVLHVTKAELL  128
            D MIA+ID  ISRQMD I+H  Q+QQLES WR++  LV+R +F+ENIK+++++VTK E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEITQSGFYKHVYSSGLGQFGGEPIAAVLGAYEFKNTTPDMKLLNYVSAVGAMA  188
            EDFE  P+IT + +YK++YSS  GQFGGEP++A+LG Y ++ +TPDM++L+ +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLKSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL + +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSATENPIKSFNYAEDVSHSHEHYLWGNTAWMLASNIADSFAKYRWAPNIIGPQSGG  308
            R PY + ENPIK FNY E+V +SH+H LWGNT   +A+ ++DSFA+YRW  NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLYESMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKNSDNAAFFSANSVQ  368
            AVKDLP  +YES G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNI  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WVRQYVADQENPPADVRSRKPLRGAKVEVLDVDGEPGWYQVAISARPHFKYMGASFELSL  484
            W+RQYV+DQENPPA+VRSR+P+RGAKV V +++GE+GWY++ ++ RPHFK+MGA+FELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDK  490
            VG+LD+
Sbjct  484  VGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  518 bits (1954),  Expect = 3e-148, Method: Compositional matrix adjust.
 Identities = 279/486 (58%), Positives = 394/486 (82%), Gaps = 4/486 (0%)

Query  9    VSTRTEQGSHAPSLLDEIMAQTRIQPGADGYDIARQGVTAFIASLLQSTSPAEPVNKLAV  68
             S+ T+ +    S++D IM  +R     ++Y+IA+ GV  FI+ ++++ S+ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDARISRQMDAIIHAPQFQQLESFWRSMKALVDRVDFRENIKVHVLHVTKAELL  128
            D MIA+ID  ISRQMD I+H  Q+QQLES WR++  LV+R +F+ENIK+++++VTK E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEITQSGFYKHVYSSGLGQFGGEPIAAVLGAYEFKNTTPDMKLLNYVSAVGAMA  188
            EDFE  P+IT + +YK++YSS  GQFGGEP++A+LG Y ++ +TPDM++L+ +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLKSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL + +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSATENPIKSFNYAEDVSHSHEHYLWGNTAWMLASNIADSFAKYRWAPNIIGPQSGG  308
            R PY + ENPIK FNY E+V +SH+H LWGNT   +A+ ++DSFA+YRW  NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLYESMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKNSDNAAFFSANSVQ  368
            AVKDLP  +YES G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNI  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WVRQYVADQENPPADVRSRKPLRGAKVEVLDVDGEPGWYQVAISARPHFKYMGASFELSL  484
            W+RQYV+DQENPPA+VRSR+P+RGAKV V +++GE+GWY++ ++ RPHFK+MGA+FELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDK  490
            VG+LD+
Sbjct  484  VGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  518 bits (1954),  Expect = 3e-148, Method: Compositional matrix adjust.
 Identities = 279/486 (58%), Positives = 394/486 (82%), Gaps = 4/486 (0%)

Query  9    VSTRTEQGSHAPSLLDEIMAQTRIQPGADGYDIARQGVTAFIASLLQSTSPAEPVNKLAV  68
             S+ T+ +    S++D IM  +R     ++Y+IA+ GV  FI+ ++++ S+ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDARISRQMDAIIHAPQFQQLESFWRSMKALVDRVDFRENIKVHVLHVTKAELL  128
            D MIA+ID  ISRQMD I+H  Q+QQLES WR++  LV+R +F+ENIK+++++VTK E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEITQSGFYKHVYSSGLGQFGGEPIAAVLGAYEFKNTTPDMKLLNYVSAVGAMA  188
            EDFE  P+IT + +YK++YSS  GQFGGEP++A+LG Y ++ +TPDM++L+ +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLKSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL + +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSATENPIKSFNYAEDVSHSHEHYLWGNTAWMLASNIADSFAKYRWAPNIIGPQSGG  308
            R PY + ENPIK FNY E+V +SH+H LWGNT   +A+ ++DSFA+YRW  NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLYESMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKNSDNAAFFSANSVQ  368
            AVKDLP  +YES G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNI  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WVRQYVADQENPPADVRSRKPLRGAKVEVLDVDGEPGWYQVAISARPHFKYMGASFELSL  484
            W+RQYV+DQENPPA+VRSR+P+RGAKV V +++GE+GWY++ ++ RPHFK+MGA+FELSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  485  VGRLDK  490
            VG+LD+
Sbjct  484  VGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  518 bits (1953),  Expect = 4e-148, Method: Compositional matrix adjust.
 Identities = 269/490 (55%), Positives = 403/490 (83%), Gaps = 2/490 (0%)

Query  2    SETSTAQEIQKETTIGLLDQIVAQTNLTPEDETYGIAKRGVSAFIQELLKPHNQSEPVKK  61
            + ++ +Q   KE  ++++D I+  +  + EDE+Y IAK GV  FI E++K ++  + ++K
Sbjct  3    GASANTQTSIKE--LSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  62   ALIDKMITEIDQRLSTQVDEILHHSSFQQLESAWRGLKLLVDRTDFRENTKIEIINISKK  121
              +D MI++ID+ +S Q+DEILH+  +QQLES+WRGL +LV+RT+F+EN KI++++++K+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  122  DLLEDFEDASDITQSGLYKHVYTNEFGTFGGQPVGAIIGNYDFGPSAPDIKNLQNvaava  181
            + LEDFE  +DIT + LYK++Y++E+G FGG+PVGAI+G+Y + +S+PD++ L +++++A
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  182  amahaPFISAAGPKFFGLDSFEGLPDLKDLNDHFESPQYAKWQSFRDQEDARYVGLTLPR  241
            AM+HAPF+++ ++ FFGLD++  LP ++DL+  +E+PQY KW++FR++ED++Y GL + R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  242  FLLRQPYDPEENPVKTFNYHENVSATHEDYLWGNTAFTMASRVTESFANFRWCPNIIGPQ  301
            FL R PY+P+ENP+K FNY ENV  +H++ LWGNT ++ A+R+T+SFAN+RWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  302  SGGTVEDLPLHHFDSMGDIETKIPTEVLVSDRREFELAEEGFIALTMRKGSDNAAFFSAN  361
            +GG+V DLP   ++S G  ++KIPTEVL++DR E+ELAE GFIA+T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  362  SVQKAKLFGNSEEGKSAELNYRLGTQLPYLFIISRLAHYIKVLQREQIGSWKEPTDLERE  421
            +  K+K+F N+ EGK AE NYRLGTQLPY+F++SRLAHY+KVLQRE+IGSWKE +D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  422  LNTWIRQYITDQENPPAEVRSRRPLRAASIEVIDVEGSPGWYKVNLSVRPHFKYMGSDFT  481
            LN W+RQY++DQENPPAEVRSRRP+R+A + V ++EG +GWY++NL+VRPHFK+MG++F 
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  482  LSLVGKLDQE  491
            LSLVGKLD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  517 bits (1952),  Expect = 5e-148, Method: Compositional matrix adjust.
 Identities = 280/490 (58%), Positives = 409/490 (84%), Gaps = 0/490 (0%)

Query  3    MVEEQAQTGAAGGSSSLLEEIMAQARITPVDEGYNVAKQGIAALVANILDSGNAAEPVNK  62
            M    A+T ++    S+++ IM  +R +  DE+YN+AK G+  ++++I+ +++A + +NK
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  63   ALVDSMIVELDKKLSKQIDVILHAQELQELESSWRSLKLLIDRTDFRENIKILLLHATKN  122
              +D MI ++D  +S+Q+D ILH +++Q+LES+WR+L +L++RT+F+ENIKI L++ TK+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  123  ELLEDFEFAPEITQSGFYKHVYSSgygqfggqpiggvigDYALTQSSPDIKLMQYVSAVG  182
            E LEDFE  P+IT + +YK++YSS YGQFGG+P+G+++GDYAL  S+PD++++  +S+++
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  183  AMAHAPFVSSVAPTFFGVDSFTDLPSIKDLKSVFEGPAYTKWRSMRESEDARYLGLTAPR  242
            AM+HAPF++S+++ FFG+D++++LP I+DLK+++EGP Y KWR+ RE+ED++Y GL   R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  243  FLARLPYDPVENPIKGFNYKEDISANHEHYLWGNTAYLMGTAITDSFAKYRWCPNIIGPQ  302
            FL+R PY+P ENPIK FNYKE++  +H+H LWGNT Y  +T +TDSFA+YRWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  303  SGGAITDLPVHVYEAMGQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSAN  362
            +GGA+ DLP  +YE+ G  Q+KIPTEVLITDR EYE+AE GFI++T+R+DS+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  363  SVQKPKVFANTKEGKEAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERE  422
            +  KPK+F+NT EGKEAETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  423  LNNWIKQYVADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMAVRPHFKYMGANFE  482
            LN+W++QYV+DQENPPA+VRSRRP+R+A++ V ++EGE+GWY++ + VRPHFK+MGANFE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  483  LSLVGRLDKE  492
            LSLVG+LD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  515 bits (1942),  Expect = 3e-147, Method: Compositional matrix adjust.
 Identities = 279/475 (59%), Positives = 401/475 (85%), Gaps = 0/475 (0%)

Query  18   SLLDHIMHQARLQPEDEGYDIAKHGISAFIANLLESGQEDVPVNKLIVDRMIAELDKKMS  77
            S++D IM+ +R   EDE+Y+IAK G+  FI++++ ++  +  +NK  +D MIA++D  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   AQMDEILHSDEFQNMESSWRSLKLLVDRTDFRENIKITILHATKEELLDDFEYSPEIVQS  137
             QMDEILH++++Q++ES+WR+L +LV+RT+F+ENIKI +++ TK+E L+DFE +P+I  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GFYKHIYASGYGQFGGEPVAAVIGNYAFTPSAPDMKLLQYVSSVGAMahapfissaapaf  197
             +YK+IY+S YGQFGGEPV+A++G+YA+ +S+PDM++L  +SS++AM+HAPF++S +++F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  fGLKSFTELPAIKELKAVFEGPAYVKWRALRESEDSRYLGLTTPRFLLRLPYDSEDNPAK  257
            FGL +++ELP I++LKA++EGP YVKWR++RE+EDS+Y GL   RFL R PY++++NP K
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  SFDYRETIQGEHDNYLWGNTAYLMACNLTDSFARYRWCPNIIGPQSGGAVHDLPVHKFES  317
             F+Y+E ++  H++ LWGNT Y  A  LTDSFA YRWC NIIGP++GGAV DLP   +ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  LGQLQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKCKVFPNTREGK  377
            +G  Q+KIPTEVLITDR E+ELAE GFI++T+R++S+NA FFSAN+  K K+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  IAETNYRLGTQLPYMFIINRLAHYVKVLQREQLGAWKERQDLERELNRWIRQYVADQENP  437
             AETNYRLGTQLPY+F+++RLAHY+KVLQRE++G+WKER D+E  LN W+RQYV+DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PAEVRSRRPLRAAQITVSDVEGDPGWYQVSMAVRPHFKYMGASFELSLVGRLDKE  492
            PAEVRSRRP+R+A++ VS++EG++GWY++++ VRPHFK+MGA+FELSLVG+LD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  513 bits (1934),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  21   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  80
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  81   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  140
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  141  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  200
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  201  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  260
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  261  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  320
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  321  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  380
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  381  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  440
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  441  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  500
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  501  LVGKLEK  507
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  513 bits (1934),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  21   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  80
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  81   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  140
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  141  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  200
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  201  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  260
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  261  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  320
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  321  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  380
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  381  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  440
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  441  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  500
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  501  LVGKLEK  507
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  513 bits (1934),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  21   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  80
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  81   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  140
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  141  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  200
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  201  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  260
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  261  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  320
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  321  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  380
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  381  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  440
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  441  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  500
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  501  LVGKLEK  507
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  513 bits (1934),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  21   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  80
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  81   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  140
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  141  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  200
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  201  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  260
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  261  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  320
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  321  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  380
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  381  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  440
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  441  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  500
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  501  LVGKLEK  507
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  513 bits (1937),  Expect = 8e-147, Method: Compositional matrix adjust.
 Identities = 261/468 (56%), Positives = 394/468 (85%), Gaps = 0/468 (0%)

Query  27   IESARIKPGDEAYSITRQGIQAFISQLLEPQNAVERITQATVDSMIADLDQKLCAQVDAI  86
            ++++R    DE+Y+I++ G+  FI++++  ++A ++I + T+D MIA++D+ +  Q+D I
Sbjct  22   MQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEI  81

Query  87   LHHADFQKMESAWRSLKFLVDRTNFRENVKIQLLSVSKGKLLEDFEDAADITKSGLYKNL  146
            LH+ ++Q++ES+WR+L FLV+RTNF+EN+KI+L+ V+K   LEDFE  +DIT + LYK +
Sbjct  82   LHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRI  141

Query  147  YTAEYGQFGGQPFGAIVANYEFGPGTQDVKLLQNVASVSAMSHAPFIAAAGPHFFGVDTY  206
            Y++EYGQFGG+P GAI+++Y + ++T D+++L +++S++AMSHAPF+++ ++ FFG+D Y
Sbjct  142  YSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNY  201

Query  207  DQLPNLKDLSSIFEGPQFVKWNAFRESEDARYVGLTLPHFLLRVPYGADTVPAKKFNYKE  266
             +LP+++DL +++EGPQ+VKW +FRE+ED++Y GL + +FL R PY ++  P KKFNYKE
Sbjct  202  AELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKE  261

Query  267  DVSGGNSQFLWGNAAFAFASRLTASFADYRWCANVIGPQGGGTVGDLPVYTYESMGELQN  326
            +V  +++++LWGN+ +AFA+RLT SFA+YRWC+N+IGP++GG+V DLP Y YES G  Q+
Sbjct  262  NVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQS  321

Query  327  KIPTEVLISERREFELAEQGFIALTMRKNSDnaaffsansaQKPKFFGNTKEGKEAELNY  386
            KIPTEVLI++R E+ELAE GFIA+T+R++S+NA FFSAN+A KPK+F NT EGKEAE NY
Sbjct  322  KIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNY  381

Query  387  KLSTQLPYMFVVSRLAHYIKVIQRENIGTWKERVDLESELNTWIRQYVADMDNPAEGVRS  446
            +L+TQLPY+F+VSRLAHY+KV+QRE+IG+WKER D+E+ LN W+RQYV+D +NP+  VRS
Sbjct  382  RLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRS  441

Query  447  RRPLRQAEIVVADVEGDPGWYRVDLKVRPHFKYMGASFTLSLVGKLDK  494
            RRP+R A ++V+++EG++GWYR++L+VRPHFK+MGA+F LSLVGKLD+
Sbjct  442  RRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1932),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 275/470 (59%), Positives = 399/470 (85%), Gaps = 0/470 (0%)

Query  23   IMAQARITPVDEGYNVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQIDV  82
            IM  +R +  DE+YN+AK G+  ++++I+ +++A + +NK  +D MI ++D  +S+Q+D 
Sbjct  21   IMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDE  80

Query  83   ILHAQELQELESSWRSLKLLIDRTDFRENIKILLLHATKNELLEDFEFAPEITQSGFYKH  142
            ILH +++Q+LES+WR+L +L++RT+F+ENIKI L++ TK+E LEDFE  P+IT + +YK+
Sbjct  81   ILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKR  140

Query  143  VYSSgygqfggqpiggvigDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDS  202
            +YSS YGQFGG+P+G+++GDYAL  S+PD++++  +S+++AM+HAPF++S+++ FFG+D+
Sbjct  141  IYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDN  200

Query  203  FTDLPSIKDLKSVFEGPAYTKWRSMRESEDARYLGLTAPRFLARLPYDPVENPIKGFHYK  262
            +++LP I+DLK+++EGP Y KWR+ RE+ED++Y GL   RFL+R PY+P ENPIK F+YK
Sbjct  201  YAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYK  260

Query  263  EDISANHEHYLWGNTAYLMGTAITDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAMGQLQ  322
            E++  +H+H LWGNT Y  +T +TDSFA+YRWC NIIGP++GGA+ DLP  +YE+ G  Q
Sbjct  261  ENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQ  320

Query  323  AKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFANTKEGKEAETN  382
            +KIPTEVLITDR EYE+AE GFI++T+R+DS+NA FFSAN+  KPK+F+NT EGKEAETN
Sbjct  321  SKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETN  380

Query  383  YKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNNWIKQYVADQENPPADVR  442
            Y+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN+W++QYV+DQENPPA+VR
Sbjct  381  YRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVR  440

Query  443  SRRPLRAAQIKVLDVEGEPGWYQVTMAVRPHFKYMGANFELSLVGRLDKE  492
            SRRP+R+A++ V ++EGE+GWY++ + VRPHFK+MGANFELSLVG+LD+E
Sbjct  441  SRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 276/475 (59%), Positives = 401/475 (85%), Gaps = 0/475 (0%)

Query  18   SLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLS  77
            S++D IM  +R S  DE+Y++AK G+  ++++I+ +++A + +NK  +D MI ++D  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQIDVILHAKELQELESSWRSMKLLVDRTDFRENIKLLVLHATKEELLEDFEFAPEISQS  137
            +Q+D ILH  ++Q+LES+WR++ +LV+RT+F+ENIK+ +++ TK+E LEDFE  P+I+ +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GFYKHVYSSgygqfggqpiggvigDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTF  197
             +YK++YSS YGQFGG+P+G+++GDYAL  S+PD++++  +S+++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTAPRFLARLPYDPVENPIK  257
            FG+D +++LP I+DLK+++EGP Y KWR++RE+ED++Y GL   RFL+R PY+P ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  GFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYEA  317
             FNYKE++   H+H LWGNT Y  +T LTDSFA+YRWC NIIGP++GGA+ DLP  +YE+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGK  377
             G  Q+KIPTEVLITDR EYE+AE GFI++T+R+DS+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNTWIKQYIADQENP  437
            EAETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGANFELSLVGRLDKE  492
            PA+VRSRRP+R+A++ V ++EGE+GWY++ ++VRPHFK+MGANFELSLVG+LD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 274/474 (58%), Positives = 401/474 (85%), Gaps = 0/474 (0%)

Query  19   LLDDIMAQARITPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSK  78
            ++D IM  +R +  DE+Y++AK G+  ++++I+ +++A + +NK  +D MI ++D  +S+
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  79   QIDVILHAKELQELESSWRSLKLLVDRTDFRENIKLLVLHATKEELLEDFEFAPEISQSG  138
            Q+D ILH  ++Q+LES+WR+L +LV+RT+F+ENIK+ +++ TK+E LEDFE  P+I+ + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  139  FYKHVYSSgygqfggqpiggvigDYAMTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFF  198
            +YK++YSS YGQFGG+P+G+++GDYA+  S+PD++++  +S+++AM+HAPF++S+++ FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  199  GVDSFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTAPRFLARLPYDPVENPIKG  258
            G+D++++LP I+DLK+++EGP Y KWR++RE+ED++Y GL   RFL+R PY+P ENPIK 
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  259  FNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAM  318
            FNYKE++   H+H LWGNT Y  +T LTDSFA+YRWC NIIGP++GGA+ DLP  +YE+ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  319  GQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGKE  378
            G  Q+KIPTEVLITDR EYE+AE GFI++T+R+DS+NA FFSAN+  KPK+FPNT EGKE
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  379  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNTWIKQYIADQENPP  438
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  439  ADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGANFELSLVGRLDKE  492
            A+VRSRRP+R+A++ V ++EGE+GWY++ ++VRPHFK+MGANFELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 273/490 (56%), Positives = 405/490 (83%), Gaps = 1/490 (0%)

Query  7    SAGQPDVAGAGAAISLLDQIMEETRIRPEDEESYSIARRGVEAFISDLLSSQEVDQRINR  66
            S++ ++   +   +S++D IM+ +R  + ++ESY+IA+ GV  FI++++ ++  +++IN+
Sbjct  2    SGASANTQTSIKELSIIDSIMQTSRY-SKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  67   VLVDRMISELDLKVSSQLDEILHDEKFQELESAWRGLKLLVDRTDFRENIKIDVLSVSKD  126
              +D MI+++D  +S Q+DEILH+E++Q+LES+WRGL +LV+RT+F+ENIKI+++ V+K+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  127  KLLEDFETSPEVVQSGLYKHVYSSGYGQFGGEPVGAMIANYDFGPGARDVKLLQFAASVG  186
              LEDFE++P++  + LYK++YSS YGQFGGEPVGA++++Y + +++ D+++L   +S++
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  187  AMAHAPFIAAAGPKMFDVDEYVDLPAQKDLFSIYEGPRFRKWMGFRQSEDSRYVGLTCPR  246
            AM+HAPF+++ ++  F++D+Y +LP  +DL ++ EGP++ KW  FR++EDS+Y GL   R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  247  FLLRMPYDAEENPVDAFVYNENVTEEHESYLWGNTSFLMATRLTESFAKYRWCPNIIGPQ  306
            FL R PY+++ENP+  F Y+ENV + H+  LWGNT +  ATRLT+SFA+YRWC NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  307  SGGAVHDLPVHVFEAFGQLEEKIPTEVLVTDRREFELAEEGFIALTMRKGSDnaaffsan  366
            +GGAV DLP  ++E+FG  + KIPTEVL+TDR E+ELAE GFIA+T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  367  saQKPKIFQNTKEGKEAETNYKLGTQLPYMMIVNRLAHYIKVLQREQIGSWKEREDLERE  426
            +A KPKIF NT EGKEAETNY+LGTQLPY+ +V+RLAHY+KVLQRE+IGSWKER D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  427  LNTWLRQYVADQENPPQDVRSRRPLRAAEVIVSDVEGDPGWYQVSLKVRPHFKYMGANFE  486
            LN W+RQYV+DQENPP +VRSRRP+R+A V+VS++EG++GWY+++L+VRPHFK+MGANFE
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  487  LSLVGKLDKD  496
            LSLVGKLD++
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  12   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  71
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  72   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  131
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  132  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  191
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  192  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  251
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  252  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  311
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  312  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  371
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  372  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  431
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  432  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  491
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  492  LVGKLEK  498
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  12   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  71
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  72   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  131
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  132  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  191
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  192  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  251
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  252  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  311
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  312  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  371
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  372  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  431
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  432  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  491
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  492  LVGKLEK  498
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  12   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  71
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  72   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  131
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  132  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  191
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  192  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  251
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  252  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  311
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  312  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  371
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  372  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  431
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  432  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  491
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  492  LVGKLEK  498
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  12   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  71
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  72   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  131
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  132  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  191
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  192  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  251
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  252  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  311
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  312  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  371
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  372  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  431
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  432  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  491
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  492  LVGKLEK  498
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  12   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  71
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  72   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  131
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  132  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  191
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  192  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  251
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  252  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  311
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  312  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  371
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  372  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  431
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  432  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  491
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  492  LVGKLEK  498
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 257/487 (53%), Positives = 406/487 (84%), Gaps = 0/487 (0%)

Query  12   DDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQAT  71
            + ++++  +    S++D +++++R  +++++Y I++ G+  F++++ K   + + +++ T
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  72   IDDMIAEIDRKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTAL  131
            +D+MIA+ID  + RQ+D ILH+  +QQLESTWR+L FLV+RT+F+EN+K++++DV K   
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  132  FDDFEDSPDITKSGLYQKVYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAM  191
            ++DFE +PDIT + LY+++Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  192  AHTpfiaaagpaffgiDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDARYVGLTLPRFL  251
            +H+PF+++ +++FFG+D+++ LP+++DL +L+EGPQY KW +FRE+ED++Y GL + RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  252  LRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGG  311
             R PY ++  P+K+FNY E V+ ++ H+LWGN+ +AFATRLT SFA+YRWC+N+IGPK+G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  312  GTVTDLPLYAYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANST  371
            G+V DLP Y YES G  Q+KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  372  QKPKFFGISKEGKEAELNYRLSTQLPYIFVVNRLAHYIKVIQRENIGSWKERGDLEQELN  431
             KPK+F  + EGKEAE NYRL+TQLPYIF+V+RLAHY+KV+QRE+IGSWKER+D+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  432  QWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPHFKYMGAFFTLS  491
            +W+RQYV D +NP+  VRSRRP+R A+++VS++EGE+GWYR++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  492  LVGKLEK  498
            LVGKL++
Sbjct  483  LVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1930),  Expect = 3e-146, Method: Compositional matrix adjust.
 Identities = 275/475 (58%), Positives = 401/475 (85%), Gaps = 0/475 (0%)

Query  18   SLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLS  77
            S++D IM  +R S  DE+Y++AK G+  ++++I+ +++A + +NK  +D MI ++D  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQIDVILHAKELQELESSWRSMKLLIDRTDFRENIKLLVLHATKEELLEDFEFAPEISQS  137
            +Q+D ILH  ++Q+LES+WR++ +L++RT+F+ENIK+ +++ TK+E LEDFE  P+I+ +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GFYKHVYSSgygqfggqpiggvigDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTF  197
             +YK++YSS YGQFGG+P+G+++GDYAL  S+PD++++  +S+++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTAPRFLARLPYDPVENPIK  257
            FG+D +++LP I+DLK+++EGP Y KWR++RE+ED++Y GL   RFL+R PY+P ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  GFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYEA  317
             FNYKE++   H+H LWGNT Y  +T LTDSFA+YRWC NIIGP++GGA+ DLP  +YE+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGK  377
             G  Q+KIPTEVLITDR EYE+AE GFI++T+R+DS+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNTWIKQYIADQENP  437
            EAETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGANFELSLVGRLDKE  492
            PA+VRSRRP+R+A++ V ++EGE+GWY++ ++VRPHFK+MGANFELSLVG+LD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1930),  Expect = 3e-146, Method: Compositional matrix adjust.
 Identities = 275/475 (58%), Positives = 401/475 (85%), Gaps = 0/475 (0%)

Query  18   SLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLS  77
            S++D IM  +R S  DE+Y++AK G+  ++++I+ +++A + +NK  +D MI ++D  +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  78   KQIDVILHAKELQELESSWRSMKLLIDRTDFRENIKLLVLHATKEELLEDFEFAPEISQS  137
            +Q+D ILH  ++Q+LES+WR++ +L++RT+F+ENIK+ +++ TK+E LEDFE  P+I+ +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  138  GFYKHVYSSgygqfggqpiggvigDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTF  197
             +YK++YSS YGQFGG+P+G+++GDYAL  S+PD++++  +S+++AM+HAPF++S+++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  198  FGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTAPRFLARLPYDPVENPIK  257
            FG+D +++LP I+DLK+++EGP Y KWR++RE+ED++Y GL   RFL+R PY+P ENPIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  258  GFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYEA  317
             FNYKE++   H+H LWGNT Y  +T LTDSFA+YRWC NIIGP++GGA+ DLP  +YE+
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  318  MGQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGK  377
             G  Q+KIPTEVLITDR EYE+AE GFI++T+R+DS+NA FFSAN+  KPK+FPNT EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  378  EAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNTWIKQYIADQENP  437
            EAETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  438  PADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGANFELSLVGRLDKE  492
            PA+VRSRRP+R+A++ V ++EGE+GWY++ ++VRPHFK+MGANFELSLVG+LD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  512 bits (1930),  Expect = 3e-146, Method: Compositional matrix adjust.
 Identities = 266/479 (56%), Positives = 404/479 (85%), Gaps = 0/479 (0%)

Query  18   LSNTTLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEID  77
            + + +++D IM  ++    +E+Y+IA+ GV  FITEI+K++ +++ INK   D+MIA+ID
Sbjct  12   IKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHID  71

Query  78   RMLGKQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEILHVSKEDLLDDFENAAD  137
             ++++QMD ILH+ ++QQLES+WR+L +LV+RT+F+ENIK+++++V+K++ L+DFE  +D
Sbjct  72   DIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPD  131

Query  138  VTCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSYMASVGAMSHapflaap  197
            +T + +YK++Y++ YGQFGGEPV+A++G+Y + +S+PD+++LS M+S++AMSHAPFL++ 
Sbjct  132  ITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSM  191

Query  198  apeffNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTGPRFMLRSAYHPQE  257
            ++ FF L+++ ELP+++++K L+ GP+  KWR+FRE+ED++  +L   RF+ RS+Y+PQE
Sbjct  192  SAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQE  251

Query  258  QPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVH  317
            +PI  FNY+E++   H++ LWGN+ + +A+ + DSFA YRWC NIIGP++GGAV DLP  
Sbjct  252  NPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTY  311

Query  318  LYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKT  377
            +YES+G  Q+KIPTEVLI+DR E+ELAE GFIA+T+R+DS+NA FFSAN+  KPK FP+T
Sbjct  312  IYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNT  371

Query  378  PEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERRDLESELNKWIKQYVAD  437
            PEG +A+TNY+LGTQLPY+F+V+RLAHY+KVLQRE+IGSWKER D+E+ LN W++QYV+D
Sbjct  372  PEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSD  431

Query  438  QENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKYMGANFEISLVGRLDTQ  496
            QENP+A+VRSRRP+R+A++ VS++ G++GWY+++L VRPHFK+MGANFE+SLVG+LD +
Sbjct  432  QENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  511 bits (1928),  Expect = 4e-146, Method: Compositional matrix adjust.
 Identities = 251/480 (53%), Positives = 396/480 (83%), Gaps = 0/480 (0%)

Query  14   STAEVSLLDDIVEATKLKPEDEAYSVTKAGLQAFLEEMVKPERAGAKVSGNLVDDMLAQI  73
            S  E+S++D I+++++   EDE+Y+++K G+  F+ E+VK + A  K++   +D+M+A+I
Sbjct  11   SIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHI  70

Query  74   DEKLSAQMDSIIHNKEFQKMESSWRSLKFLIDRTDFRENVRIQMMNVSKEDLLDDFDDAP  133
            D+ +S QMD I+HN ++Q++ES+WR+L FL++RT+F+EN++I++ +V+K++ L+DF+  P
Sbjct  71   DDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANP  130

Query  134  EITKSGLYKQAYTAEYGQFGGQPFGAIIGNYDFGPGPQDMKLLQYTASVSAMSHAPFIAA  193
            +IT + LYK+ Y++EYGQFGG+P GAI+G+Y + ++  DM++L   +S++AMSHAPF+++
Sbjct  131  DITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTS  190

Query  194  AGPEFFGIEKWSELPNLKDLKSIFEMPQYAKWNSFRESDDSRNVGLTLPKFLLRLPYGPE  253
             ++ FFG+++ +ELP+++DLK+++E PQY KW +FRE++DS+  GL + +FL R PY P+
Sbjct  191  MSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQ  250

Query  254  TLPAKSFNYQETVSDGDDDFCWGNTAFAFASKLTDSFAKYRWCANIIGPQGGGAVEDLPL  313
              P K FNY+E V ++++++ WGNT +AFA++LTDSFA+YRWC+NIIGP++GGAV DLP 
Sbjct  251  ENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPT  310

Query  314  YQYEAMGAVQTKIPTQVLLSERREFELAEEGFIGLTMRKGSDNAAFFSANSCQKPKFFGT  373
            Y YE+ G+ Q+KIPT+VL+++R E+ELAE GFI++T+R++S+NA FFSAN+  KPK+F  
Sbjct  311  YIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPN  370

Query  374  SKEGKEAELNYKLSTQLPYMMIMDRLAHYIKVIQRENIGTWKERGDLERELNTWISQYVT  433
            + EGKEAE NY+L+TQLPY+ ++ RLAHY+KV+QRE+IG+WKER+D+E  LN W+ QYV+
Sbjct  371  TPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVS  430

Query  434  EMDNPAPSVRSRRPLRMAKIEVSDVEGDPGWYQVSLKARPHFKYMGASFTLSLVGKLEKE  493
            + +NP++ VRSRRP+R AK+ VS++EG++GWY+++L+ RPHFK+MGA+F LSLVGKL++E
Sbjct  431  DQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  511 bits (1926),  Expect = 5e-146, Method: Compositional matrix adjust.
 Identities = 276/470 (59%), Positives = 399/470 (85%), Gaps = 0/470 (0%)

Query  23   IMAQARITPVDEGYNVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQIDV  82
            IM  +R +  DE+YN+AK G+  ++++I+ +++A + +NK  +D MI ++D  +S+Q+D 
Sbjct  21   IMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDE  80

Query  83   ILHAQELQELESSWRSLKLLIDRTDFRENIKILLLHATKDELLEDFEFAPEITQSGFYKH  142
            ILH +++Q+LES+WR+L +L++RT+F+ENIKI L++ TK+E LEDFE  P+IT + +YK+
Sbjct  81   ILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKR  140

Query  143  VYSSgygqfggqpiggvigDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDS  202
            +YSS YGQFGG+P+G+++GDYAL  S+PD++++  +S+++AM+HAPF++S+++ FFG+D+
Sbjct  141  IYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDN  200

Query  203  FTDLPSIKDLKSVFEGPTYTKWRSMRESEDARYLGLTAPRFLARLPYDPVENPIKGFNYK  262
            +++LP I+DLK+++EGP Y KWR+ RE+ED++Y GL   RFL+R PY+P ENPIK FNYK
Sbjct  201  YAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYK  260

Query  263  EDISASHENYLWGNTAYLMGTAITDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAMGQLQ  322
            E++  SH++ LWGNT Y  +T +TDSFA+YRWC NIIGP++GGA+ DLP  +YE+ G  Q
Sbjct  261  ENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQ  320

Query  323  AKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFANTKEGKEAETN  382
            +KIPTEVLITDR EYE+AE GFI++T+R+DS+NA FFSAN+  KPK+F+NT EGKEAETN
Sbjct  321  SKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETN  380

Query  383  YKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNNWIKQYVADQENPPADVR  442
            Y+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN+W++QYV+DQENPPA+VR
Sbjct  381  YRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVR  440

Query  443  SRRPLRAAQIKVLDVEGEPGWYQVTMAVRPHFKYMGANFELSLVGRLDKE  492
            SRRP+R+A++ V ++EGE+GWY++ + VRPHFK+MGANFELSLVG+LD+E
Sbjct  441  SRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  511 bits (1927),  Expect = 5e-146, Method: Compositional matrix adjust.
 Identities = 273/474 (58%), Positives = 400/474 (85%), Gaps = 0/474 (0%)

Query  19   LLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSK  78
            ++D IM  +R S  DE+Y++AK G+  ++++I+ +++A + +NK  +D MI ++D  +S+
Sbjct  17   IIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISR  76

Query  79   QIDVILHAKELQELESSWRSLKLLIDRTDFRENIKLLVLHATKEELLEDFEFAPEISQSG  138
            Q+D ILH  ++Q+LES+WR+L +L++RT+F+ENIK+ +++ TK+E LEDFE  P+I+ + 
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  139  FYKHVYSSgygqfggqpiggvigDYAMTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFF  198
            +YK++YSS YGQFGG+P+G+++GDYA+  S+PD++++  +S+++AM+HAPF++S+++ FF
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  199  GVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTAPRFLARLPYDPVENPIKG  258
            G+D +++LP I+DLK+++EGP Y KWR++RE+ED++Y GL   RFL+R PY+P ENPIK 
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  259  FNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYQAM  318
            FNYKE++   H+H LWGNT Y  +T LTDSFA+YRWC NIIGP++GGA+ DLP  +Y++ 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  319  GQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGKE  378
            G  Q+KIPTEVLITDR EYE+AE GFI++T+R+DS+NA FFSAN+  KPK+FPNT EGKE
Sbjct  317  GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKE  376

Query  379  AETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNTWIKQYIADQENPP  438
            AETNY+LGTQLPY+F+++RLAHY+KVLQRE+IGSWKER D+E  LN W++QY++DQENPP
Sbjct  377  AETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPP  436

Query  439  ADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGANFELSLVGRLDKE  492
            A+VRSRRP+R+A++ V ++EGE+GWY++ ++VRPHFK+MGANFELSLVG+LD+E
Sbjct  437  AEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  511 bits (1927),  Expect = 5e-146, Method: Compositional matrix adjust.
 Identities = 268/479 (56%), Positives = 403/479 (85%), Gaps = 0/479 (0%)

Query  18   LSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEID  77
            + + +++D IM  ++    +E+Y+IA+ GV  FITEI+K++ +++ INK   D+MIA+ID
Sbjct  12   IKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHID  71

Query  78   RMLGNQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEVLHVTKEDLLDDFENAAD  137
             +++ QMD ILH+ ++QQLES+WR+L +LV+RT+F+ENIK+++++VTK++ L+DFE  +D
Sbjct  72   DIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPD  131

Query  138  ITCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSYMASVGAMSHapflaap  197
            IT + +YK++Y++ YGQFGGEPV+A++G+Y + +S+PD+++LS M+S++AMSHAPFL++ 
Sbjct  132  ITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSM  191

Query  198  apeffNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTGPRFMLRSAYHPQE  257
            ++ FF L+++ ELP+++++K L+ GP+  KWR+FRE+ED++  +L   RF+ RS+Y+PQE
Sbjct  192  SAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQE  251

Query  258  QPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVH  317
            +PI  FNY+E++   H++ LWGN+ + +A+ + DSFA YRWC NIIGP++GGAV DLP  
Sbjct  252  NPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTY  311

Query  318  LYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKT  377
            +YES+G  Q+KIPTEVLI+DR E+ELAE GFIA+T+R+DS+NA FFSAN+  KPK FP+T
Sbjct  312  IYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNT  371

Query  378  PEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERRDLESELNKWIKQYVAD  437
            PEG +A+TNY+LGTQLPY+F+V+RLAHY+KVLQRE+IGSWKER D+E+ LN W++QYV+D
Sbjct  372  PEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSD  431

Query  438  QENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKYMGANFEISLVGRLDTQ  496
            QENP+A+VRSRRP+R+A++ VS++ G++GWY+++L VRPHFK+MGANFE+SLVG+LD +
Sbjct  432  QENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  511 bits (1926),  Expect = 6e-146, Method: Compositional matrix adjust.
 Identities = 267/479 (56%), Positives = 403/479 (85%), Gaps = 0/479 (0%)

Query  18   LSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEID  77
            + + +++D IM  ++    +E+Y+IA+ GV  FITEI+K++ +++ INK   D+MIA+ID
Sbjct  12   IKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHID  71

Query  78   RMLGNQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEVLHVSKEDLLDDFENAAD  137
             +++ QMD ILH+ ++QQLES+WR+L +LV+RT+F+ENIK+++++V+K++ L+DFE  +D
Sbjct  72   DIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPD  131

Query  138  ITCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSYMASVGAMSHapflaap  197
            IT + +YK++Y++ YGQFGGEPV+A++G+Y + +S+PD+++LS M+S++AMSHAPFL++ 
Sbjct  132  ITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSM  191

Query  198  apeffNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTGPRFMLRSAYHPQE  257
            ++ FF L+++ ELP+++++K L+ GP+  KWR+FRE+ED++  +L   RF+ RS+Y+PQE
Sbjct  192  SAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQE  251

Query  258  QPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVH  317
            +PI  FNY+E++   H++ LWGN+ + +A+ + DSFA YRWC NIIGP++GGAV DLP  
Sbjct  252  NPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTY  311

Query  318  LYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKT  377
            +YES+G  Q+KIPTEVLI+DR E+ELAE GFIA+T+R+DS+NA FFSAN+  KPK FP+T
Sbjct  312  IYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNT  371

Query  378  PEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERRDLESELNKWIKQYVAD  437
            PEG +A+TNY+LGTQLPY+F+V+RLAHY+KVLQRE+IGSWKER D+E+ LN W++QYV+D
Sbjct  372  PEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSD  431

Query  438  QENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKYMGANFEISLVGRLDTQ  496
            QENP+A+VRSRRP+R+A++ VS++ G++GWY+++L VRPHFK+MGANFE+SLVG+LD +
Sbjct  432  QENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  510 bits (1923),  Expect = 1e-145, Method: Compositional matrix adjust.
 Identities = 253/480 (53%), Positives = 394/480 (83%), Gaps = 0/480 (0%)

Query  15   TTTEGSLLDDIVEATKLKPEDEAYSVTKAGLQAFLEEMVKPEREGAKVSGGLVDDMLAQI  74
            +  E S++D I+++++   EDE+Y+++K G+  F+ E+VK +    K++   +D+M+A+I
Sbjct  11   SIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHI  70

Query  75   DKKLSSQMDSIIHNKEFQQLESSWRSLKFLVDRTNFRENVRIQMMNVSKQDLLDDFDDAP  134
            D  +S QMD I+HN ++QQLES+WR+L FLV+RTNF+EN++I++ +V+KQ+ L+DF+  P
Sbjct  71   DDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANP  130

Query  135  EITKSGLYKQAYTAEYGQFGGQPFGAIIGNYDFGPGPQDMKLLQYTASVAAMTHAPFIAA  194
            +IT + LYK+ Y++EYGQFGG+P GAI+G+Y + ++  DM++L   +S+AAM+HAPF+++
Sbjct  131  DITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTS  190

Query  195  AGTEFFGIEKWSELPNLKDLKSIFEMPQYAKWNSFRESDDARNVGLTLPKFLLRLPYGPD  254
             ++ FFG+++ +ELP+++DLK+++E PQY KW +FRE++D++  GL + +FL R PY P+
Sbjct  191  MSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQ  250

Query  255  TLPAKSFNYQESVIDGDDDFCWGNTAFAFASKLTDSFAKYRWCANIIGPQGGGAVEDLPL  314
              P K FNY+E+V ++++++ WGNT +AFA++LTDSFA+YRWC+NIIGP++GGAV DLP 
Sbjct  251  ENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPT  310

Query  315  YQYEAMGAVQTKIPTQVLLSERREFELAEEGFIGLTMRKGSDNAAFFSANSTQKPKFFGT  374
            Y YE+ G+ Q+KIPT+VL+++R E+ELAE GFI++T+R++S+NA FFSAN++ KPK+F  
Sbjct  311  YIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPN  370

Query  375  SKEGKEAELNYKLSTQLPYMMIMDRLAHYIKVIQRENIGTWKERGDLERELNTWISQYVT  434
            + EGKEAE NY+L+TQLPY+ ++ RLAHY+KV+QRE+IG+WKER+D+E  LN W+ QYV+
Sbjct  371  TPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVS  430

Query  435  EMDNPAPSVRSRRPLRMAKIEVSDVEGDPGWYQVSLKARPHFKYMGAAFTLSLVGKLEKE  494
            + +NP++ VRSRRP+R AK+ VS++EG++GWY+++L+ RPHFK+MGA F LSLVGKL++E
Sbjct  431  DQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  510 bits (1923),  Expect = 1e-145, Method: Compositional matrix adjust.
 Identities = 255/488 (53%), Positives = 389/488 (80%), Gaps = 0/488 (0%)

Query  7    AAGSAGVQTLEGGSLLDEILAETKMTPGDEGYEIAKRGVQAFISELVAPRREGEKVDKAF  66
            +A++    ++   S++D I+  ++ +  DE+Y+IAK GV  FI+E+V      +K++K  
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  67   VDALIAEIDVKLSRQIDEILHNPSFQKLESAWRGLKFVIDRCDFRENVKVEMLNCSKEDL  126
            +D +IA+ID  +SRQ+DEILHN  +Q+LES+WRGL F+++R +F+EN+K+++++ +K++ 
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  127  LADFEDAPEVPKSGLYKIVYSAEFGQFGGKPVGAIIANYEFGPGPQDIALLQKCAAVATM  186
            L DFE  P++  + LYK +YS+E+GQFGG PVGAI+++Y + ++  D+ +L K +++A+M
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  187  SHAPFIAAAGPQFFGLKDFQGLPNLKDLKALFEGPQYTKWNAFRETEDARYVGLVMPRFL  246
            SHAPF+++ ++ FFGL ++  LP+++DLKAL+EGPQY KW +FRE ED++Y GL++ RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  247  LRLPFGANTVPVKAFNYEEDVVGKHDAYCWGNATYAFATRLADSFAKYRWCPNIIGPQAG  306
             R P+ ++  P+K FNY E+V   H+   WGN+ YAFATRL+DSFA+YRWC NIIGP+AG
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  307  GSVENLPLHQYEAMGEIQTKVPTEIMLTERREFELSEEGFIGLTFRKDSDNACFFSANSA  366
            G+V +LP   YE+ G  Q+K+PTE+++T+R E+EL+E GFI++T+R+DS+NA FFSAN+A
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  367  QKAKFFGQSDEGRAAEMNYRLGTQLPYMFIMCRIAHYLKVLQREQIGTWKERADLEKELN  426
             K+K+F ++ EG+ AE NYRLGTQLPY+F++ R+AHYLKVLQRE+IG+WKERAD+E+ LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  427  DWIGQYVADQDVVSAATRGRRPLRKARIIVTEVPGNAGWYKVDMQVRPHFKYMGAFFTLS  486
            +W+ QYV+DQ+  +A  R+RRP+R A+++V+E+ G+AGWY+++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  487  LVGKLDKE  494
            LVGKLD+E
Sbjct  483  LVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  510 bits (1925),  Expect = 7e-146, Method: Compositional matrix adjust.
 Identities = 268/479 (56%), Positives = 402/479 (84%), Gaps = 0/479 (0%)

Query  18   LSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEID  77
            + + +++D IM  ++    +E+Y+IA+ GV  FITEI+K++ +++ INK   D+MIA+ID
Sbjct  12   IKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHID  71

Query  78   RMLGNQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEVLHVTKEDLLDDFENAAD  137
             +++ QMD ILH+ ++QQLES+WR+L +LV+RT+F+ENIK+++++VTK++ L+DFE  +D
Sbjct  72   DIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPD  131

Query  138  ITCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSYMASVGAMSHapflaap  197
            IT + +YK++Y++ YGQFGGEPV+A++G+Y + +S+PD+++LS M+S++AMSHAPFL++ 
Sbjct  132  ITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSM  191

Query  198  apeffNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTGPRFMLRSAYHPQE  257
            ++ FF L+++ ELP+++++K L+ GP+  KWR+FRE+ED++  +L   RF+ RS+Y+PQE
Sbjct  192  SAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQE  251

Query  258  QPIESFNYNEGIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVH  317
            +PI  FNY+E +   H++ LWGN+ + +A+ + DSFA YRWC NIIGP++GGAV DLP  
Sbjct  252  NPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTY  311

Query  318  LYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKT  377
            +YES+G  Q+KIPTEVLI+DR E+ELAE GFIA+T+R+DS+NA FFSAN+  KPK FP+T
Sbjct  312  IYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNT  371

Query  378  PEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERRDLESELNKWIKQYVAD  437
            PEG +A+TNY+LGTQLPY+F+V+RLAHY+KVLQRE+IGSWKER D+E+ LN W++QYV+D
Sbjct  372  PEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSD  431

Query  438  QENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKYMGANFEISLVGRLDTQ  496
            QENP+A+VRSRRP+R+A++ VS++ G++GWY+++L VRPHFK+MGANFE+SLVG+LD +
Sbjct  432  QENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  510 bits (1923),  Expect = 9e-146, Method: Compositional matrix adjust.
 Identities = 259/488 (54%), Positives = 388/488 (80%), Gaps = 0/488 (0%)

Query  7    AAGSAGVQTLEGGSLLDEILAETKMTPGDEGYEIAKRGVQAFISELVAPRREGEKVDKAF  66
            +A++    ++   S++D I+  ++ +  DE+Y+IAK GV  FI+E+V      +K++K  
Sbjct  3    GASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYT  62

Query  67   VDALIAEIDVKLSRQIDEILHHPSFQKLESAWRGLKFVIDRCDFRENVKVEMLNCSKEDL  126
            +D +IA+ID  +SRQ+DEILH+  +Q+LES+WRGL F+++R +F+EN+K+++++ +K++ 
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  127  LADFEDAPEVPKSGLYKLVYSAEFGQFGGKPVGAIIANYEFGPGPQDIALLQKCAAVAAM  186
            L DFE  P++  + LYK +YS+E+GQFGG PVGAI+++Y + ++  D+ +L K +++AAM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  187  SHAPFIAAAGPQFFGLKDFIGLPNLKDLKALFEGPQYTKWNAFRETEDSRYVGLVMPRFL  246
            SHAPF+++ ++ FFGL ++  LP+++DLKAL+EGPQY KW +FRE EDS+Y GL++ RFL
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  247  LRLPFGANTVPVKAFNYEEDVVGKHDAYCWGNATYAFATRLADSFAKYRWCPNIIGPQAG  306
             R P+ ++  P+K FNY E+V   H+   WGN+ YAFATRL+DSFA+YRWC NIIGP+AG
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  307  GAVENLPLHQYEAMGEIQTKIPTEIMLTERREFELSEEGFIGLTFRKDSDNACFFSANSA  366
            GAV +LP   YE+ G  Q+KIPTE+++T+R E+EL+E GFI++T+R+DS+NA FFSAN+A
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  367  QKPKFYGQSEEGRAAEMNYRLGTQLPYMFIMCRIAHYLKVLQREQIGTWKERADLERELN  426
             KPK++ ++ EG+ AE NYRLGTQLPY+F++ R+AHYLKVLQRE+IG+WKERAD+E  LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  427  EWIGQYVADQDVVSAATRGRRPLRKARIIVTEVPGNAGWYKVDMQVRPHFKYMGAFFTLS  486
            EW+ QYV+DQ+  +A  R+RRP+R A+++V+E+ G+AGWY+++++VRPHFK+MGA F LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  487  LVGKLDKE  494
            LVGKLD+E
Sbjct  483  LVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  508 bits (1916),  Expect = 3e-145, Method: Compositional matrix adjust.
 Identities = 254/469 (55%), Positives = 395/469 (85%), Gaps = 0/469 (0%)

Query  39   LIEAARVKRDEDAYPITRQGIQAFVAHLAKPKRPIETVSQATIDDMIAEIDRKLCRQVDA  98
            +++++R  +++++Y I++ G+  F++++ K   + + +++ T+D+MIA+ID  + RQ+D 
Sbjct  21   IMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDE  80

Query  99   ILHDPDFQQLESTWRSLKFLVQRTDFRENIRIQFLDVGKAALLDDFDDSPDITKSGLYQK  158
            ILH+ ++QQLESTWR+L FLV+RT+F+ENI+I+++DV K   L+DF+ +PDIT + LY++
Sbjct  81   ILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKR  140

Query  159  VYTAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYAASTAAMAHTpfvaaagpaffgIDS  218
            +Y++EYGQFGG+P+GAI+++Y++ +++ D+++L   +S AAM+H+PF+++ +++FFG+D+
Sbjct  141  IYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDN  200

Query  219  FGKLPNVKDLASLFEGPQFAKWNAFRESEDARYVGLTLPRFLLRLPYGANTTPVKRFNYD  278
            ++ LP+++DL +L+EGPQ+ KW +FRE+ED++Y GL + RFL R PY ++  P+K+FNY 
Sbjct  201  YAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYK  260

Query  279  ERVDGGDADFLWGNAAFAFATRLTASFADYRWCANVIGPKGGGTVADLPLYAYEAMGEIQ  338
            E V+ ++ ++LWGN+ +AFATRLT SFA+YRWC+N+IGPK+GG+V DLP Y YE+ G  Q
Sbjct  261  ENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQ  320

Query  339  NKIPTDVLISERREFELAEQGFIALTMRKHSDNAAFFSANSTQKPKFFGIGKEGKEAELN  398
            +KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++ KPK+F    EGKEAE N
Sbjct  321  SKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETN  380

Query  399  YRLGTQLPYIFVVNRLAHYIKVIQRENIGTWKERGDLEQELNQWIRQYVADMDNPTEGVR  458
            YRLGTQLPYIF+V+RLAHY+KV+QRE+IG+WKER+D+E+ LN+W+RQYV+D +NP   VR
Sbjct  381  YRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVR  440

Query  459  SRRPLRQAEIFVSDVEGEPGWYRVDMKVRPHFKYMGASFTLSLVGKLEK  507
            SRRP+R A ++VS++EGE+GWYR++++VRPHFK+MGA+F LSLVGKL++
Sbjct  441  SRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  507 bits (1912),  Expect = 7e-145, Method: Compositional matrix adjust.
 Identities = 254/469 (55%), Positives = 397/469 (85%), Gaps = 0/469 (0%)

Query  39   LIEAARVKRDEEAYPITRHGIEAFVAHLARPKRPIETVSQATIDDMIAEIDRKLCRQVDA  98
            +++++R  +++E+Y I++ G+  F++++ +   + + +++ T+D+MIA+ID  + RQ+D 
Sbjct  21   IMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDE  80

Query  99   ILHHPDFQQLESTWRSLKFLVERTDFRENIKIQFLDVGKAALLDDFDDSPDITKSGLYQK  158
            ILH+ ++QQLESTWR+L FLVERT+F+ENIKI+++DV K   L+DF+ +PDIT + LY++
Sbjct  81   ILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKR  140

Query  159  VYAAEYGQFGGQPIGAIVANYTFGPGAQDVKLLQYVASTSAMAHTpfiaaagpaffgiDS  218
            +Y++EYGQFGG+P+GAI+++Y++ +++ D+++L  ++S +AM+H+PF+++ +++FFG+D+
Sbjct  141  IYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDN  200

Query  219  FGKLPNVKDLASLFEGPQFAKWNAFRESEDARYVGLTLPRFLLRLPYGANTTPVKRFNYD  278
            ++ LP+++DL +L+EGPQ+ KW +FRE+ED++Y GL + RFL R PY ++  P+K+FNY 
Sbjct  201  YAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYK  260

Query  279  ERVDGGDADFLWGNAAFAFATRLTASFADYRWCANVIGPKGGGTVADLPLYAYEAMGEIQ  338
            E V+ ++ ++LWGN+ +AFATRLT SFA+YRWC+N+IGPK+GG+V DLP Y YE+ G  Q
Sbjct  261  ENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQ  320

Query  339  NKIPTDVLISERREFELAEQGFIALTMRKHSDNAAFFSANSTQKPKFFGISKEGKDAELN  398
            +KIPT+VLI++R E+ELAE GFIA+T+R++S+NA FFSAN++ KPK+F  + EGK+AE N
Sbjct  321  SKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETN  380

Query  399  YRLGTQLPYIFVVNRLAHYIKVIQRENIGTWKERGDLEQELNQWIRQYVADMDNPTEGVR  458
            YRLGTQLPYIF+V+RLAHY+KV+QRE+IG+WKER+D+E+ LN+W+RQYV+D +NP   VR
Sbjct  381  YRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVR  440

Query  459  SRRPLRQAEIFVSDVEGEPGWYRVDMKVRPHFKYMGASFTLSLVGKLEK  507
            SRRP+R A ++VS++EGE+GWYR++++VRPHFK+MGA+F LSLVGKL++
Sbjct  441  SRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  505 bits (1903),  Expect = 4e-144, Method: Compositional matrix adjust.
 Identities = 263/475 (56%), Positives = 393/475 (83%), Gaps = 0/475 (0%)

Query  17   SLLDAIVAQTKLTQDDDTYDVVKSGVGAlieelissnnneekvnksviDKMIAEIDKKIS  76
            S++D+I+  ++ +++D++Y++ K GV  +I E++ +++ E+K+NK  +D MIA+ID  IS
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  77   SQMDEILHNKQFQALESKWRGLYMLVERTDFRQNILMEFINVSKEDLIEDFEESLDITQS  136
             QMDEILHN Q+Q LES WRGLY LVERT+F++NI +++++V+K++ +EDFE + DIT +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  137  GLYKHVYSSGYGQFGGEPVGTIIADYELSPSNVDIKFLNKVAAISAMAHAPFIGAAGPKF  196
             LYK++YSS YGQFGGEPVG+I++DY L++S  D++FL+K+++I+AM+HAPF+ + ++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  197  FGLNSFEGLPDLKDIEDVMSSPQFAAWRGFRKNEDSRYVGLTLPRFLLRAPYDPEDNPIS  256
            FGL+++  LP ++D+  ++ +PQ+  WR FR NEDS+Y GL + RFL R+PY+P++NPI 
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  257  NFVYKEDVSKDHENYLWGNTVYAFASKLTDSFASFRWCTNIIGPKSGGEVKDLPVHTFES  316
            +F YKE+V + H++ LWGNT+YAFA++LTDSFA++RWC NIIGPK+GG VKDLP   +ES
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  317  MGDIEMKIPTEVLVSDRREYELSEQGFIPLIMRKGSNTaaffaassaQEPKIFPNTPEGN  376
             G  + KIPTEVL++DR EYEL+E GFI++ +R++SN A FF+A++A  PKIFPNTPEG+
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  377  EAQLNYKLGTQLPYLYAITRMSHYIKVLQREHIGSWRERADLERELNRWAKQYVANQENP  436
            EA+ NY+LGTQLPY++ ++R++HY+KVLQRE+IGSW+ERAD+E  LN W +QYV++QENP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  437  TAEIRSKRPFKDIAINVEDVSTDPGWYKVRISLRPHFKYMGASFELSLVGKLDKE  491
             AE+RS+RPF++  + V ++  ++GWY++ +++RPHFK+MGA+FELSLVGKLD+E
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  505 bits (1903),  Expect = 4e-144, Method: Compositional matrix adjust.
 Identities = 252/476 (53%), Positives = 384/476 (81%), Gaps = 1/476 (0%)

Query  19   SLLDEILSETKMKPSDDGYDVARRGVQAFIAQMLAPGRSAERVDKALVDAMIAEVDQRLS  78
            S++D I+  ++    D++Y++A+ GV  FI++++  + + ++++K  +D MIA++D+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  79   SQVNEILHHPQLQSLESSWRSLKFLIERTDFRENTRVEVLNASKQDLITDFEDAPEVVKS  138
             Q++EILH+ Q+Q LES+WR+L FL+ERT+F+EN ++++++ +KQ+ + DFE  P++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  139  GLYRTVYSNEYGVFGGKPYGLVVGNFDVGPGPEDLSLLSKIASVAAMSHTPFVANASPEF  198
             LY+ +YS+EYG FGG P G ++G++ + ++  D+++LSK++S+AAMSH+PF+++ S+ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  199  FGQQESFLGLPALKDLKSLFEGPQYARWHSFRESEDARYVGLCMPRFLLRLPYSEKTVPV  258
            FG  +++  LP ++DLK+L+EGPQY +W++FRE+ED++Y GL + RFL R PY  +  P+
Sbjct  196  FGL-DNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPI  254

Query  259  KSFNFTEDVVGHHERYLWGYASTAFASRVTDSFAKFRWCPNIIGPQAGGAVENLPLHQYE  318
            K FN+ E+V   H++ LWG +  AFA+R+TDSFA++RWC NIIGP+AGGAV +LP   YE
Sbjct  255  KKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYE  314

Query  319  AMGEIQTKIPTEVLLTERREFELSEEGFIGLVFRKDTDNAAFFSANSAQKPKFFGNTPEG  378
            + G  Q+KIPTEVL+T+R E+EL+E GFI++ +R+D++NA FFSAN+A KPK+F NTPEG
Sbjct  315  SFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEG  374

Query  379  KAAETNYRLGTQLPYMFIMSRLAHYVKVLQREQIGSWKERSDLERELNQWINQYVADMDE  438
            K AETNYRLGTQLPY+F++SRLAHY+KVLQRE+IGSWKER+D+E  LN+W+ QYV+D ++
Sbjct  375  KEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQEN  434

Query  439  PAPSVRSRRPLRTARIKVEDVEGQPGWYRCNLQVRPHFKYMGAAFTLSLVGKLDKE  494
            P++ VRSRRP+R A++ V ++EG++GWYR NL+VRPHFK+MGA F LSLVGKLD+E
Sbjct  435  PPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  501 bits (1889),  Expect = 5e-143, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYQGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 278/487 (58%), Positives = 398/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP+K F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  497 bits (1874),  Expect = 7e-142, Method: Compositional matrix adjust.
 Identities = 277/487 (57%), Positives = 397/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPARTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP + F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKKFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  497 bits (1874),  Expect = 7e-142, Method: Compositional matrix adjust.
 Identities = 277/487 (57%), Positives = 397/487 (82%), Gaps = 0/487 (0%)

Query  8    APVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAV  67
            A+ ++  +    S++D IM  +R     ESY+I++ GV  FI+ +++ DS+ + IN  ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  68   DAMIADIDARTSRQMDAIIHAPEFQelesllrslkllverADTRENIKVHFLNVTQEELL  127
            D MIA+ID   SRQMD I+H  ++Q+LES  R+L +LVER++ +ENIK+++++VT++E L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  128  DDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYISQVSAMA  187
            +DFE  P+IT ++ YK++YSS YGQFGGEPV+A++G++A++ +TPDM++L  +S ++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  188  HSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGLTAPRFLL  247
            H+PFL+S+S+ FFGLD+ +ELP I++  A++EGP Y +WR++RE+EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  248  RHPYSPDENPARTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGG  307
            R PY P+ENP + F Y E+V +SH+  LWGNT + +A+ L++SFA+YRWC NIIGP +GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  308  AVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQ  367
            AVKDLP  +YES G  Q+KIPTEVLITDR EYELAE GFI++T+R++S+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  368  KPKKFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSDLERELNT  427
            KPK FP+TPEGK AETNY+LGTQLPY+F++SRLAHY+KV+QRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  428  WIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGASFDLSL  487
            W+RQYV+DQENPPAEVRS+RP+R AK+ V +++GE+GWY++ ++VRPHFK+MGA+F+LSL
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSL  483

Query  488  VGRLDKE  494
            VG+LD+E
Sbjct  484  VGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  481 bits (1815),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 263/490 (54%), Positives = 397/490 (82%), Gaps = 0/490 (0%)

Query  5    MNGTAPFQDQGATDVSLLEDIVRVTKLQPADEAYSITRRGVAALMAQLLEPGAEARKVSK  64
            M+G+++  + +  ++S+++ I++ ++    DE+Y+I++ GV  ++++++  ++   K++K
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  65   AVLDDMIAEIDRKLSLQMDEILHHPQFQALESSWRSLHFLVDRTDFRENNRIEFLNATKE  124
              LD+MIA+ID  +S QMDEILH+ Q+Q LES+WR+L FLV+RT+F+EN +I++++ TK+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  125  ELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPFGAIIGNYDFGPGAQDIKLLQSLaava  184
            E L+DFE  P+++ + LYK +YS+EYGQFGG P GAI+G+Y + +++ D+++L  ++++A
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  185  gmahapfmaaaSPQFFGCDDFTALPNLKDISSILEGPQYAKWQAFRESEDARYVGLALPR  244
            +M+HAPF+++ S+ FFG D+++ LP+++D+ ++LEGPQY KW++FRE+ED++Y GL + R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  245  FLLRLPYGEATRPAKCFNYEEQVSDSHDRYCWGNAAFAFATRLTESFANFRWCANIIGPQ  304
            FL R PY     P K FNY E+V +SH++  WGN+ +AFATRLT+SFAN+RWC+NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  305  GGGTVHDLPLHQYQAMGAIQTKIPTEVLISERREFELAEGGFIALTMRKGSDNAAFFSAN  364
            +GG+V DLP   Y++ G+ Q+KIPTEVLI++R E+ELAE+GFIA+T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  365  SVQKPKFFGSSKEGKEAELNYKLGLQLPYMFIVSRLAHYLKVIQREHIGTWKERGDLENE  424
            +  KPK+F ++ EGKEAE NY+LG QLPY+F+VSRLAHYLKV+QRE+IG+WKER+D+EN 
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  425  LNLWIRQYVSEMDNPMPGVRSRRPLRQAevtveevpgepgWYRVGLKVTPHFKYMGAYFT  484
            LN W+RQYVS+ +NP + VRSRRP+R A V V E+ GE+GWYR+ L+V PHFK+MGA F 
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  485  LSLVGKLDKE  494
            LSLVGKLD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  481 bits (1815),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 263/490 (54%), Positives = 397/490 (82%), Gaps = 0/490 (0%)

Query  5    MNGTAPFQDQGATDVSLLEDIVRVTKLQPADEAYSITRRGVAALMAQLLEPGAEARKVSK  64
            M+G+++  + +  ++S+++ I++ ++    DE+Y+I++ GV  ++++++  ++   K++K
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  65   AVLDDMIAEIDRKLSLQMDEILHHPQFQALESSWRSLHFLVDRTDFRENNRIEFLNATKE  124
              LD+MIA+ID  +S QMDEILH+ Q+Q LES+WR+L FLV+RT+F+EN +I++++ TK+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  125  ELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPFGAIIGNYDFGPGAQDIKLLQSLaava  184
            E L+DFE  P+++ + LYK +YS+EYGQFGG P GAI+G+Y + +++ D+++L  ++++A
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  185  gmahapfmaaaSPQFFGCDDFTALPNLKDISSILEGPQYAKWQAFRESEDARYVGLALPR  244
            +M+HAPF+++ S+ FFG D+++ LP+++D+ ++LEGPQY KW++FRE+ED++Y GL + R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  245  FLLRLPYGEATRPAKCFNYEEQVSDSHDRYCWGNAAFAFATRLTESFANFRWCANIIGPQ  304
            FL R PY     P K FNY E+V +SH++  WGN+ +AFATRLT+SFAN+RWC+NIIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  305  GGGTVHDLPLHQYQAMGAIQTKIPTEVLISERREFELAEGGFIALTMRKGSDNAAFFSAN  364
            +GG+V DLP   Y++ G+ Q+KIPTEVLI++R E+ELAE+GFIA+T+R++S+NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  365  SVQKPKFFGSSKEGKEAELNYKLGLQLPYMFIVSRLAHYLKVIQREHIGTWKERGDLENE  424
            +  KPK+F ++ EGKEAE NY+LG QLPY+F+VSRLAHYLKV+QRE+IG+WKER+D+EN 
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  425  LNLWIRQYVSEMDNPMPGVRSRRPLRQAevtveevpgepgWYRVGLKVTPHFKYMGAYFT  484
            LN W+RQYVS+ +NP + VRSRRP+R A V V E+ GE+GWYR+ L+V PHFK+MGA F 
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  485  LSLVGKLDKE  494
            LSLVGKLD+E
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  481 bits (1815),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 251/476 (53%), Positives = 385/476 (81%), Gaps = 0/476 (0%)

Query  19   LSLLDEILSEAKLKPKDEGYDVAKRGVQAFITEMLAPNRAEERVDKALVDAMIAEIDKRL  78
            LS++D I+  ++    DE+Y++AK GV  FITE++  + AE++++K  +D MIA+ID  +
Sbjct  15   LSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDII  74

Query  79   SAQVNEILHAQEFQKLESSWRSLKFMVDRTDFRENTRVEMLNVSKDDLQKDFEDAPEVTK  138
            S Q++EILH +++Q+LES+WR+L F+V+RT+F+EN ++++++V+K++   DFE  P++T 
Sbjct  75   SRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITT  134

Query  139  SGLYKLVYSNEYGVFGGKPYGIISANYDFNVGPQDMELLRKCASVAAMAHAPFIGNAAPE  198
            + LYK +YS+EYG FGG P G I ++Y +N +  DM++L K +S+AAM+HAPF+ + ++ 
Sbjct  135  ATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAG  194

Query  199  VFGEEsflklpdlkdlkslfEGPQYARWHSFRESEDARYVGLALPRFLLRLPYGEKTVPV  258
             FG +++  LP ++DLK+L+EGPQY +W++FRE+ED++Y GL + RFL R PY  +  P+
Sbjct  195  FFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPI  254

Query  259  KAFNFTEDVVGHHERYLWGHASVALTSRVADSFAKFRWSPNIIGPQSGGAVENLPLHQYE  318
            K FN+ E+V   H++ LWG++  A+++R++DSFA++RW  NIIGP++GGAV +LP   YE
Sbjct  255  KKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYE  314

Query  319  AMGEIQTKIPTEVMLTERREFELSEEGFIGLVFRKDSDNAAFFSANSTQKPKFFGNTPEG  378
            + G  Q+KIPTEV++T+R E+EL+E GFI++ +R+DS+NA FFSAN++ KPK+F NTPEG
Sbjct  315  SFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEG  374

Query  379  KAAETNYRLGTQLPYMFIMTRLAHYIKVLQREQIGSWKEKSDLERELNHWLSQYISDMDD  438
            K AETNYRLGTQLPY+F+++RLAHY+KVLQRE+IGSWKE++D+E  LN+W+ QY+SD ++
Sbjct  375  KEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQEN  434

Query  439  PAPAVRSRRPLRAARVVVEDVDGQPGWYRCSLQVRPHFKYMGASFTLSLVGKLDKE  494
            P++ VRSRRP+R+A+V+V +++G++GWYR +L+VRPHFK+MGA+F LSLVGKLD+E
Sbjct  435  PPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  480 bits (1808),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 249/476 (53%), Positives = 383/476 (81%), Gaps = 0/476 (0%)

Query  19   LSLLDEILSEAKLKPKDEGYDVAKRGVQAFITEMLAPNRSEERVDKALVDAMIAEIDKRL  78
            LS++D I+  ++    DE+Y++AK GV  FITE++  + +E++++K  +D MIA+ID  +
Sbjct  15   LSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDII  74

Query  79   SSQVNEILHAKEFQKLESSWRSLKFMVDRTDFRENTRVEMLNASKEDLQKDFEDAPEVTK  138
            S Q++EILH  ++Q+LES+WR+L F+V+RT+F+EN ++++++ +K++   DFE  P++T 
Sbjct  75   SRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITT  134

Query  139  SGLYKLVYSNEYGVFGGKPYGIISANYDFNVGPQDMELLRKCASVAAMAHAPFIGNAAPE  198
            + LYK +YS+EYG FGG P G I ++Y +N +  DM++L K +S+AAM+HAPF+ + ++ 
Sbjct  135  ATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAG  194

Query  199  VFGEEsflklpdlkdlkslfEGPQYARWHSFRESEDARYVGLALPRFLLRLPYGEKTVPV  258
             FG +++  LP ++DLK+L+EGPQY +W++FRE+ED++Y GL + RFL R PY  +  P+
Sbjct  195  FFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPI  254

Query  259  KAFNFTEDVVGHHERYLWGHASVALTSRVADSFAKFRWSPNIIGPQSGGAVENLPLHQYE  318
            K FN+ E+V   H++ LWG++  A+++R++DSFA++RW  NIIGP++GGAV +LP   YE
Sbjct  255  KKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYE  314

Query  319  AMGEIQTKIPTEVMLTERREFELSEEGFIGLVFRKDSDNAAFFSANSTQKPRFFGNTPEG  378
            + G  Q+KIPTEV++T+R E+EL+E GFI++ +R+DS+NA FFSAN++ KP++F NTPEG
Sbjct  315  SFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEG  374

Query  379  KAAETNYRLGTQLPYMFIMTRLAHYIKVLQREQIGSWKEKSDLERELNHWLSQYISDMDD  438
            K AETNYRLGTQLPY+F+++RLAHY+KVLQRE+IGSWKE++D+E  LN+W+ QY+SD ++
Sbjct  375  KEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQEN  434

Query  439  PAPAVRSRRPLRAARVVVEDVEGQPGWYRCSLQVRPHFKYMGASFTLSLVGKLDKE  494
            P++ VRSRRP+R+A+V+V ++EG++GWYR +L+VRPHFK+MGA+F LSLVGKLD+E
Sbjct  435  PPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  480 bits (1810),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 239/488 (49%), Positives = 391/488 (81%), Gaps = 3/488 (0%)

Query  5    SGQVSETEVIDSPMLDEILEFTRLPRQDDSYLVARNGVKAMLEEVFRKSEDDTVRIDKLF  64
            ++  ++T + + +++D I++ +R +++D+SY +A+ GV   + E+  K++    +I+K  
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIV-KTDSAENKINKYT  62

Query  65   IDELINELDQVISRQMDAILHHPEFQRIEAPWRSMKFLVDRTDFSENIKLEYINATKDDL  124
            +DE+I ++D++ISRQMD ILH+ ++Q++E+ WR++ FLV+RT+F ENIK++ ++ TK++ 
Sbjct  63   LDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEA  122

Query  125  LADFEDAAGVVDSGLFRQLYTEEFGQFGGEPVGAIIGNFEFSPGSEDIKLLEYLASLSAM  184
            L DFE  +++  + L++++Y+ E+GQFGGEPVGAI+G++ +++++ D+++L  ++S++AM
Sbjct  123  LEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAM  182

Query  185  THAPFIAAAGPEFFGLGDYSGLPQIKQLEAIFDGPQYMKWRGLRESDDARNIGLAMPRFM  244
            +HAPF+++ ++ FFGL++Y+ LP+I++L A+++GPQY+KWR +RE++D++  GL + RF+
Sbjct  183  SHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFL  242

Query  245  LRGTYG-DQIGVRSFNYRESI-SGKTDFLWGNAAFSYATRLTESFASYRWCPNIIGPQSG  302
             R+ Y  ++  ++ FNY+E++ ++  ++LWGN+ +++ATRLT+SFA+YRWC NIIGP++G
Sbjct  243  TRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAG  302

Query  303  GATVDMPVHISEENGRTDVNGPVEITISDRKEYELSELGFIPFTMRKDSDSAVFFSSNSI  362
            GA  D+P  I E  G T+ + P E+ I+DR EYEL+E GFI+FT+R+DS++AVFFS+N+ 
Sbjct  303  GAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAA  362

Query  363  QKPKLFGNDDEGKQAELNYRLGTQMPYLFIVNRLAHYIKVLQRENLGSWKSRGDIEMELN  422
             KPK+F N  EGK+AE NYRLGTQ+PY+F+V+RLAHY+KVLQRE++GSWK R+DIE  LN
Sbjct  363  LKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLN  422

Query  423  KWIRQYVADQENPSASTRSQRPLRKANLKVSEVDGEAGWYRVALEITPHFKFMGANFTLS  482
             W+RQYV+DQENP+A  RS+RP+R A++ VSE++GEAGWYR+ L++ PHFKFMGANF LS
Sbjct  423  EWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELS  482

Query  483  LASMIERA  490
            L + ++R 
Sbjct  483  LVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 256/459 (56%), Positives = 373/459 (82%), Gaps = 4/459 (0%)

Query  9    VSSHAGQPEQESSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +E S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWY  463
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWY  462

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 256/459 (56%), Positives = 373/459 (82%), Gaps = 4/459 (0%)

Query  9    VSSHAGQPEQESSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +E S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWY  463
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWY  462

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 256/459 (56%), Positives = 373/459 (82%), Gaps = 4/459 (0%)

Query  9    VSSHAGQPEQESSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +E S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWY  463
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWY  462

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 256/459 (56%), Positives = 373/459 (82%), Gaps = 4/459 (0%)

Query  9    VSSHAGQPEQESSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV  68
             S+++  + +E S++D IM  +R     E+Y++A+ GV  FI+ I+++ ++ + +NK ++
Sbjct  4    ASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTL  63

Query  69   DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL  128
            D MIA+ID+ ISRQMD I+H   +QQ+ES WR+L  +V+R +F+ENIK+N+++VTKQE L
Sbjct  64   DEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEAL  123

Query  129  EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA  188
            EDFE  P+I  + +YK++YSS +GQFGGEP++A+LG Y ++ ++PDM++L  +S+++AM+
Sbjct  124  EDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMS  183

Query  189  HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL  248
            HAPFL+S+S+ F GL++ +ELP+I+DL A++EGP Y KWR++R++EDS+Y GL   RFL 
Sbjct  184  HAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLT  243

Query  249  RQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPNIIGPQSGG  308
            R PY P +NP+K+FNY E+V ++H++ LWGNT   +A  ++DSFA+YRWC NIIGP++GG
Sbjct  244  RSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGG  303

Query  309  AVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQ  368
            AVKDLP  ++E+ G  Q+KIPTEVL+TDR E+ELAE GFI++T+R+DS+NA FFSAN+  
Sbjct  304  AVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAAL  363

Query  369  KPKHFP----GKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNT  424
            KPK FP    GK+AETNY+LGTQLPY+F+++RLAHY+KVLQRE++GSWKER+D+E  LN 
Sbjct  364  KPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNE  423

Query  425  WIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWY  463
            W+RQYV+DQENPPA+VRSR+P+R+AKV V ++EGE+GWY
Sbjct  424  WMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWY  462

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  475 bits (1790),  Expect = 3e-135, Method: Compositional matrix adjust.
 Identities = 249/474 (53%), Positives = 388/474 (82%), Gaps = 0/474 (0%)

Query  21   SLLEEITQATKLKPADEAYGMAKKGVEALIAQLIEPGKGVDKVTKAVVDEMIAEIDKKVG  80
            S+++ I Q+++    DE+Y +AK GV  +I++++  + + +K+ K  +DEMIA+ID  ++
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  81   LQVDAILHHEDFQKLESAWRSMKYMVDNTDFRENIKLEIVNISKEDLLDDFEDSPEIAKS  140
             Q+D ILH+E++Q+LES+WR++ ++V+ T+F+ENIK+++ +++K++ L+DFE +P+I+ +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  141  GLYKTAYTAEYGQFGGQPYAAMIGNYDFGPGPQDIKLLQSIASVaamahapfiaaaGPQF  200
             LYK  Y++EYGQFGG+P +A++G+Y + ++  D+++L  ++S+AAM+HAPF+++ ++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  201  FDIEDFNELPNLKDLKSIFEGPKYLKWQSFRESEDARYIGLTMPRFLLRLPYGAESDPIK  260
            F+++++ ELP+++DLK+++EGP+Y+KW++FRE+ED++Y GL + RFL R PY ++ +PIK
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  261  TFEYEENVVGNHGKYLWGNAAFAFATRLTDSFAKYRWCANIIGPQGGGTVEDLKLHQYNA  320
             F+Y ENV  +H   LWGN+ +AFATRLTDSFA+YRWC+NIIGP++GG+V DL    Y++
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  321  MGATQTKIPTEVLVSERKEFELAEEGFIGLTMRKNSDNAAFFSANSVQKAKNFGISKEGK  380
             G+TQ+KIPTEVL+++R E+ELAE GFI++T+R++S+NA FFSAN+  K+K F  + EGK
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  381  EAELNYKLGLQLPYMFVINRLAHYLKVLQRENIGSWKERSDLEMELNKWISQYVTEMDNp  440
            EAE NY+LG QLPY+F+++RLAHYLKVLQRE+IGSWKER+D+E  LN W+ QYV++ +NP
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  441  sasarsrrpLRMAEVTVDSVEGEPGWYKVGLKVRPHFKYMGASFTLSLVGKLDK  494
            +A  RSRRP+R A V V  +EGE+GWY++ L+VRPHFK+MGA+F LSLVGKLD+
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDR  489

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  463 bits (1746),  Expect = 9e-132, Method: Compositional matrix adjust.
 Identities = 246/482 (52%), Positives = 372/482 (78%), Gaps = 4/482 (0%)

Query  3    AIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESLID  62
            +IKE S+++SI+  S+   +  SY+IA  G+  ++T+++  D    + +++K  ++ +I 
Sbjct  11   SIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSA--ENKINKYTLDEMIA  68

Query  63   ELDEKLSKQMDEIIHNSVFQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDFED  122
            ++D+ +S+QMDEI+HN  +Q LES WR+L +L +RT+F+ENIKI+++ V+K+E LEDFE 
Sbjct  69   HIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEA  128

Query  123  AADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPSVPDMNLLSHMSSLSAMTHAPFI  182
             +DI  + LY+++Y+ E+GQ+GG+P G I+G+Y +++S PDMN+LS MSS++AM+HAPF+
Sbjct  129  NPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFL  188

Query  183  TSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRTYG  242
            TS S  FFGL+++AELP +++L A++EGPQY+ WR FR ++D++  GL + RF+ R  Y 
Sbjct  189  TSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYE  248

Query  243  -ENIPVSAFNYKESINNKSEYL-WGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADL  300
             ++ P+  FNYKE+++N  + L WGN+ +A+ATRL +SFA+YRWC NIIGP++GG V DL
Sbjct  249  PQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDL  308

Query  301  PIDIVDDSGTDKVFGPVELKVSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKF  360
            P  I +  GT +   P E+ ++DR E+EL+E GFI+FTLR+DS++AVFFS+N++  PK F
Sbjct  309  PTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIF  368

Query  361  TNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENLGSWKSKTELETELNKWIRQY  420
             N  EGK+AE NYRLGTQLPY+F+V+RLAHY+KVLQRE++GSWK ++++E  LN W+RQY
Sbjct  369  PNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQY  428

Query  421  VADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE  480
            V+DQ+NP+A  RS+RP+R A + VS+I+ E GWY + ++V PHFKFMGA+F LSL + L+
Sbjct  429  VSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLD  488

Query  481  RA  482
            R 
Sbjct  489  RE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  447 bits (1684),  Expect = 8e-127, Method: Compositional matrix adjust.
 Identities = 239/490 (49%), Positives = 368/490 (76%), Gaps = 0/490 (0%)

Query  3    MQAGQQEEPATESGGSLLEEILAEAGIPPANEAYQDVKRGVAAALDRVAGRPDAGPALDN  62
            M ++  +  ++    S+++ I+  +  +  +E+Y+  K GV   +  +     A   +++
Sbjct  1    MSGASANTQTSIKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINK  60

Query  63   ALIDLWIAEIDLRLSRQIDEILHHPAFQRLEAAWRGLKFAVDRIDFRENIRIEVLNCSKD  122
              +D  IA+ID  +SRQ+DEILH+  +Q+LE++WRGL F V+R +F+ENI+I++++ +K+
Sbjct  61   YTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQ  120

Query  123  DLLADFEDSSEIVRSGLYKIVYSSEFGSFGGKPFAAVISNYEFGPGPQDIALLQKCAAVA  182
            + L DFE +++I  + LYK +YSSE+G FGG P +A++++Y + ++  D+ +L K +++A
Sbjct  121  EALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIA  180

Query  183  TMAHAPFLAVAGPQFFGLADYRKVPHLGDVKALFEGPQYVKYTSFRESEDARYVGlllpr  242
            +M+HAPFL+  ++ FFGL +Y  +P + D+KAL+EGPQYVK  +FRE+ED++Y GLL+ R
Sbjct  181  AMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTR  240

Query  243  fllrlpYGASTVPVRSFSYEEDVVGNHAAYLWGAPTYAMATRLAESFARHRWCLHIIGPQ  302
            FL R PY +   P++ F+Y E+V  +H   LWG   YA ATRL++SFA  RWC +IIGP+
Sbjct  241  FLTRSPYEPQENPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPK  300

Query  303  SGGTVEGLTLHEYEALGAIQTKIPTEIMLTERREFELSEEGFIGLTFRKDTDNACFFSAN  362
            +GG+V +L    YE++G+ Q+KIPTE+++T+R E+EL+E GFI++T+R+D++NA FFSAN
Sbjct  301  AGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSAN  360

Query  363  SVQKPKFFGQSEEGRAAEVNYRLGTQLPYVLLVSRLAHYLKVMQREQIGTWKERGDLERE  422
            +  KPK+F ++ EG+ AE NYRLGTQLPY++LVSRLAHYLKV+QRE+IG+WKER+D+E  
Sbjct  361  AALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENG  420

Query  423  LNSWLNQYVADMDVVSPAVRSRRPLRKARTTVTEVEGSAGWYRVHLEVRPHLKYMGAYFT  482
            LN W+ QYV+D +  ++ VRSRRP+R A+  V+E+EG AGWYR++L+VRPH+K+MGA F 
Sbjct  421  LNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFE  480

Query  483  LSLMGKLDRE  492
            LSL+GKLDRE
Sbjct  481  LSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  441 bits (1661),  Expect = 6e-125, Method: Compositional matrix adjust.
 Identities = 233/475 (50%), Positives = 359/475 (76%), Gaps = 0/475 (0%)

Query  47   SLLAELLAETGVASTSGAYHDVKRGVEAVVGKVAGRPEAGAALDSALIDLWIAEIDQRLS  106
            S++  ++  +  +    +Y+  K GV   +  +     A   ++   +D  IA+ID+ +S
Sbjct  16   SIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIIS  75

Query  107  RQIDEILHHPVFQRLEAAWRGLKFAIDHIDFRENIRVEILNCSKDDLLADFEDSSEVVRS  166
            RQ+DEILH+  +Q+LE++WRGL F +++ +F+ENI++++++ +K++ L DFE ++++  +
Sbjct  76   RQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTA  135

Query  167  GLYKIVYSSEFGNFGGKPFGAVISNYEFGPVPQDIALLQKCAAVATMAHAPFLAVAGPQF  226
             LYK +YSSE+G+FGG P GA++++Y + +   D+ +L K +++A+M+HAPFL+  ++ F
Sbjct  136  TLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGF  195

Query  227  FGLKDYRKVPHLGDIKALFEGPQYVKYTAFRESEDARYVGlllprfllrlpYGASTSPIR  286
            FGL +Y  +P + D+KAL+EGPQYVK  +FRE+ED++Y GLL+ RFL R PY +  +PI+
Sbjct  196  FGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIK  255

Query  287  AFSYEEDVVGNHAAYCWGAPTYAMATRLAESFARHRWCLHIIGPQSGGTVEGLTLHEYDA  346
             F+Y E+V  +H    WG   YA ATRL++SFA  RWC +IIGP++GG+V +L    Y++
Sbjct  256  KFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYES  315

Query  347  LGAIQTKIPTEIMLTERREFELSEEGFIGLTFRKDTDNACFFSANSAQKPKYFGQSDEGR  406
            +G+ Q+KIPTE+++T+R E+EL+E GFI++T+R+D++NA FFSAN+A KPK F ++ EG+
Sbjct  316  FGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  407  AAEVNYRLGTQLPYVFLVSRLAHYLKVMQREQIGTWKERGDLERELNSWLSQYVADMDVV  466
             AE NYRLGTQLPY+FLVSRLAHYLKV+QRE+IG+WKER+D+E  LN W+ QYV+D +  
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  467  SPAVRSRRPLRKGRTSVTEVEGSAGWYRVHLEVRPHLKYMGAYFTLSLMGKLDRE  521
            ++ VRSRRP+R ++  V+E+EG AGWYR++L+VRPH+K+MGA F LSL+GKLDRE
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  369 bits (1388),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 197/374 (53%), Positives = 306/374 (82%), Gaps = 0/374 (0%)

Query  18   LSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEID  77
            + + +++D IM  ++    +E+Y+IA+ GV  FITEI+K++ +++ INK   D+MIA+ID
Sbjct  12   IKELSIIDSIMQTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHID  71

Query  78   RMLGKQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEVLHVTKEDLLDDFENAAD  137
             ++++QMD ILH+ ++QQLES+WR+L +LV+RT+F+ENIK+++++VTK++ L+DFE  +D
Sbjct  72   DIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPD  131

Query  138  ITCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSYMASVGAMSHapflaap  197
            IT + +YK++Y++ YGQFGGEPV+A++G+Y + +S+PD+++LS M+S++AMSHAPFL++ 
Sbjct  132  ITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSM  191

Query  198  apeffNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTGPRFMLRSAYHPQE  257
            ++ FF L+++ ELP+++++K L+ GP+  KWR+FRE+ED++  +L   RF+ RS+Y+PQE
Sbjct  192  SAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQE  251

Query  258  QPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVH  317
            +PI  FNY+E++   H++ LWGN+ + +A+ + DSFA YRWC NIIGP++GGAV DLP  
Sbjct  252  NPIKKFNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTY  311

Query  318  LYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKT  377
            +YES+G  Q+KIPTEVLI+DR E+ELAE GFIA+T+R+DS+NA FFSAN+  KPK FP+T
Sbjct  312  IYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNT  371

Query  378  PEGLQAQTNYKLGT  391
            PEG +A+TNY+LGT
Sbjct  372  PEGKEAETNYRLGT  385

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  361 bits (1357),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 189/452 (42%), Positives = 327/452 (73%), Gaps = 5/452 (1%)

Query  66   AMTVFLKMIQDSSQQVDRLDKSLLDFHIAHLDQQISQQLDAIMHHETFQQIESAWRGLKF  125
            ++  F+  I  +    ++++K  LD  IAH+D+ IS+Q+D I+H+E +QQ+ES+WRGL F
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  126  LVDRTDFRKNVKIEVLDVSKDALRQDFEDTPELIQSGLYLHTYIQEYDTPGGEPVGSIIS  185
            LV+RT+F+ N+KI+++DV+K+   +DFE  P++  + LY + Y  EY+  GGEPVG+I++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  186  NYEFDRSQQDIVLLRNISKVSAAAHMPFIGSVSPKFFGKDSMDEVASIRDIGNYFDRAEY  245
            +Y ++ S  D+ +L ++S ++A +H PF+ S+S+ FFG D+  E++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  246  LKWKSFRDSDDARYIGLTLPRFLARLPYGPDTVPVRAFNYTEAVKGPDHSRYLWGNASFA  305
            +KW++FR+++D++Y GL + RFL+R PY P+  P++ FNY E V  + H++ LWGN+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  306  FAVNMVQSFIKNGWCVQIRGPQAGGLVEDLPIHLYDLGTGNQAKIPTEVLIPETREFEFA  365
            FA  + +SF +  WC +I GP+AGG V DLP  +Y+     Q+KIPTEVLI +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  366  NLGFIPLSYYKNHDFACFFSAHSAQKPALY----DTKEATANSRVNARLPYIFLLSRIAH  421
            + GFI+++  ++ + A FFSA++A KP ++    + KEA +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  422  YLKLIQRENIGTTKDRRVLELELNTWIKTLVTEMTDPGDELQASHPLREAKVIVEDIEDN  481
            YLK++QRE+IG+ K+R  +E  LN W++  V++  +P  E+++ +P+R AKV+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  482  PGFFRVKLFIVPHFQIEGMDINLSLVSQMPKA  513
            +G +R++L + PHF++ G +++LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  361 bits (1355),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 186/448 (42%), Positives = 325/448 (73%), Gaps = 5/448 (1%)

Query  70   FLKMIQDSSQQVDRLDKSLLDFHIAHLDEQISRQLDAIMHHETFQQIESAWRGLKFLVDR  129
            F+  I  +    ++++K  LD  IAH+D+ ISRQ+D I+H+E +QQ+ES+WRGL FLV+R
Sbjct  44   FITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVER  103

Query  130  TDFRKNVKIEVLDASKEALRQDFEDTPEVIQSGLYLHTYIQEYDTPGGEPIGSIISNYAF  189
            T+F+ N+KI+++D +K+   +DFE  P++  + LY + Y  EY+  GGEP+G+I+++YA+
Sbjct  104  TNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYAL  163

Query  190  DRSPQDIALLRNISKVSAAAHMPFIGSVSPKFFGKDSMEDVASIRDIGNYFDRAEYLKWK  249
            + S  D+ +L ++S ++A +H PF+ S+S+ FFG D+  +++ I+D+   ++ ++Y+KW+
Sbjct  164  NASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWR  223

Query  250  SFRDSDDARYIGLTLPRFLARLPYGPETVPVRAFNYTEAVKGPDHNRYLWANASFAFAAN  309
            +FR+++D++Y GL + RFL+R PY P+  P++ FNY E V  + HN+ LW+N+ +AFA+ 
Sbjct  224  TFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYAFATR  282

Query  310  MVQSFIKNGWCVQIRGPQAGGLVEDLPIHLYDLGTGNQAKIPTEVLIPETREFEFANLGF  369
            + +SF +  WC +I GP+AGG V DLP  +Y+     Q+KIPTEVLI +  E+E+A+ GF
Sbjct  283  LTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGF  342

Query  370  IPLSYYKNHDFACFFSAHSTQKPALY----DTSEATANSRVNARLPYIFLLSRIAHYLKL  425
            I+++  ++ + A FFSA+++ KP ++    +  EA +N R+ ++LPYIFL+SR+AHYLK+
Sbjct  343  IAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKV  402

Query  426  IQRENIGTTKDRRLLELELNTWVKTLVTEMTDPGDELQASHPLREAKVIVEDIEDNPGFF  485
            +QRE+IG+ K+R  +E  LN W++  V++  +P  E+++ +P+R AKV+V +IE+++G +
Sbjct  403  LQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWY  462

Query  486  RVKLFIVPHFQIEGMDINLSLVSQMPKA  513
            R++L + PHF++ G +++LSLV+++ + 
Sbjct  463  RINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 185/448 (42%), Positives = 324/448 (73%), Gaps = 5/448 (1%)

Query  72   FLKMINESSQQVDRLDKSLLDFHIAHLDRQISRQLDAIMHNETFQQIESAWRGLKFLVDR  131
            F+  I  +    ++++K  LD  IAH+D  ISRQ+D I+HNE +QQ+ES+WRGL FLV+R
Sbjct  44   FITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVER  103

Query  132  TDFRKNVRIEVLDVSKEQLRQDFEDTPEVIQSGLYLHTYIQEYDTPGGEPIGSIISNYEF  191
            T+F+ N++I+++DV+K++  +DFE  P++  + LY + Y  EY+  GGEP+G+I+++Y +
Sbjct  104  TNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYAL  163

Query  192  DRSPQDIALLRNIAKVSAAAHMPFIGSVSPKFFGKDSMEEVASIRDIGNYFDRAEYLKWK  251
            + S  D+ +L +++ ++A +H PF+ S+S+ FFG D+  E++ I+D+   ++ ++Y+KW+
Sbjct  164  NASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWR  223

Query  252  SFRESDDARYIGLTLPRFLARLPYGPDTTPVRAFNYEEAVKGPDHTRYLWANASFAFAAN  311
            +FRE++D++Y GL + RFL+R PY P+  P++ FNY E V  + H + LW+N+ +AFA+ 
Sbjct  224  TFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYAFATR  282

Query  312  MVRSFIKNGWCVQIRGPQAGGLVEDLPIHLYDLGTGNQAKIPSEVLIPETREFEFSNLGF  371
            +  SF +  WC +I GP+AGG V DLP  +Y+     Q+KIP+EVLI +  E+E+++ GF
Sbjct  283  LTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGF  342

Query  372  IPLSYYKNHDFACFFSAHSAQKPAVY----DTKEATANSRVNARLPYIFLLSRIAHYLKL  427
            I+++  ++ + A FFSA++A KP ++    + KEA +N R+ ++LPYIFL+SR+AHYLK+
Sbjct  343  IAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKV  402

Query  428  IQRENIGTTKDRRLLELELNTWVKSLVTEMTDPGDDLQASHPLREAKVIVEDIEDNPGFF  487
            +QRE+IG+ K+R  +E  LN W++  V++  +P  ++++ +P+R AKV+V +IE+++G +
Sbjct  403  LQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWY  462

Query  488  RVKLFIVPHFQIEGMDINLSLVSQMPKA  515
            R++L + PHF++ G +++LSLV+++ + 
Sbjct  463  RINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  355 bits (1334),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 194/452 (43%), Positives = 318/452 (71%), Gaps = 5/452 (1%)

Query  64   GIQVFLDLATRNNSQIERIDKTLLDQYIAQIDQTIGNQLDVILHHLDFQKMESAWRGLQF  123
            G+  F+    + +S  ++I+K  LD+ IA+ID+ I+ Q+D ILH+ ++Q++ES+WRGL F
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  124  MVDRCDFRCNTKVEILDCSKEDLLEDFEEAPEIIQTGLYKHVYVSEYDTPGGQPFSNIVA  183
            +V+R +F+ N K++++D +K++ LEDFE  P+I  + LYK++Y SEY+  GG+P + I++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  184  NFEFDSSAQDVTLLREASKVSASAHCPFLASVGSKFFGKSSVEEIAKINDLSNYMEKAEF  243
            ++ +++S+ D+ +L   S ++A +H PFL+S+++ FFG  +  E++KI+DL   +E +++
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  244  TRWRSFRETEDSRYVGLLTPRFLLRLPYGQDTIPVRTFNYEENVSAEDHRSYLFGNPVFA  303
             +WR+FRE EDS+Y GLL  RFL R PY  +  P++ FNY ENV  + H   L GN ++A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVH-NSHNHLLWGNTIYA  278

Query  304  FAGNIAQSFAKHGWAVNIRGPEAGGKVENLPVHLHDSGKGMQIKMPTEMLVSETRELEMA  363
            FA  +++SFA+  W  NI GP AGG V +LP  + +S    Q K+PTE+L+++  E E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  364  NLGFIPLSYYKNSDFACFFSANSVQKPSEYANT----EANANSMINARLPYIFLVSRLAH  419
            + GFI+++  ++S+ A FFSAN+  KP  ++NT    EA++N  + ++LPYIFLVSRLAH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  420  YLKVLQRENIGSSKSRQKLENELNAWIQTLVTKMKDPEPELIATHPLRDGQVTVREIPEN  479
            YLKVLQRE+IGS K R  +EN LN W++  V+   +P +E+ + +P+R+++V V EI  +
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  480  PGYYSVDLFVRPHFQIEGVDVQLKLVAQMPRD  511
            +G Y ++L VRPHF++ G + +L LV+++ R+
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  353 bits (1325),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 197/466 (43%), Positives = 339/466 (73%), Gaps = 6/466 (1%)

Query  44   QNPKHMAEVETNERITAALKVFFELALESGTQIERIDKTLLDQYIATIDDVISAQLDEVL  103
            Q ++   E E+ +    ++  F+   + +++  ++I+K  LD+ IA IDD+IS Q+DE+L
Sbjct  23   QTSRYSKEDESYNIAKMGVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEIL  82

Query  104  HHKDFQKVESSWRGLKFLVDRTDFKANMKIELLDCTKEALREDFEESPDTTQSGLFDQIY  163
            H+ ++Q++ES+WRGL FLV+RT+F+ N+KI+L+D TK+   EDFE +PD T + L+ +IY
Sbjct  83   HNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIY  142

Query  164  TQEYDTPGGEPVTSMIANFEFDRTGADVELLTEVSKVASAAHCPFISAIGPEFFDKESIE  223
            + EY+  GGEPV ++++++ ++ + +D+++L+ +S +A+ +H PF++++++ FF+ ++  
Sbjct  143  SSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYA  202

Query  224  DIPKIQDIGTYMDRAEYIRWKGFRETEDSRYVGLVFPRFLLRLPYG-EENPIRSFNYREG  282
            ++PKIQD+ + ++ ++Y++W+ FRE EDS+Y GL+  RFL R PY  +ENPI+ FNY+E 
Sbjct  203  ELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKEN  262

Query  283  VTGEQHNRYLWGNSAFAFAANMTRSFKKNGWTVNIRGPESGGKLDKLPIHFYQSGRGTES  342
            V  + HN+ LWGN+ +AFA+ +T SF +  W  NI GP +GG +  LP  +Y+S   T+S
Sbjct  263  VH-NSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQS  321

Query  343  KIPTEVLISETKELELADHGFIPLSYYKNSDYACFFSANSTQRPLECDEDADTANA----  398
            KIPTEVLI++  E ELA+ GFI+++  ++S+ A FFSAN++ +P    + ++  +A    
Sbjct  322  KIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNY  381

Query  399  RINSRLPYIFLVSRIAQYLKILQRENIGSLKSRQDLENELNAWLQSLVTKMNNPEPELAA  458
            R+ ++LPYIFLVSR+A+YLK+LQRE+IGS K R D+EN LN W++  V+  +NP +E+ +
Sbjct  382  RLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRS  441

Query  459  THPLKDGRVFVSESEDNPGYYFVNMHVQPHFQVEGVDVKLSLVSQM  504
             +P+++++V+VSE E+++G Y +N++V+PHF+  G +  LSLV+++
Sbjct  442  RRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKL  487

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  351 bits (1319),  Expect = 6e-98, Method: Compositional matrix adjust.
 Identities = 185/452 (41%), Positives = 320/452 (71%), Gaps = 5/452 (1%)

Query  68   GMGAFLDLVAQTSKPVDRLDKSLLDFFIGQLDRQISRQLDSVMHNPEFQALEGRWRGLKM  127
            G+  F+  + +T  + ++++K  LD  I+++D  ISRQ+D ++HN ++Q LE+ WRGL  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  128  LVSRTDFRKNARIEVLDVSKDALVRDFEDAPELIQSGLYRLTYIEEYDTPGGQPISAMIS  187
            LV RT+F+ N +I+++DV+K+  + DFE  P++  + LY+  Y  EY+  GG+P++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  188  DFEFANSPQDVALLRNISKVAAAAHMPFIGSVGAAFFGKKSMEEVAAIQDIGNYFDRAEY  247
            D+ +  S  D+ +L ++S +AA +H PF+ S++A+FFG  +  E++ IQD+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  248  IKWKSFRDTDDSRYVGLVMPRVLGRLPYGKDTTPVRAFNYEEQVKGPDHDRYLWVNASFA  307
            +KW++FR+ +DS+Y GL++ R L R PY  +  P++ FNY E+V  + H++ LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  308  FAANMTRSFVNNGWCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA  367
            FA+ +T SF N  WC +I GP+AGG V DLP  +Y+     Q+KIPTEVLI +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  368  NLGFIPLSFYKNHDFACFFSANSSQKPALY----ETKEATANSRINARLPYIFLLSRIAH  423
            + GFI++++ ++ + A FFSAN++ KP ++    E KEA +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  424  YLKLIQRENIGTTKDRRLLELELNNWIKGLVTEMKDPGDELQASHPLREAKVMVEDIEDN  483
            YLK++QRE+IG+ K+R  +E  LN+W++  V++  +P  E+++ +P+R AKV+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  484  PGFFRIKLFIVPHFQVEGMDIGLSLVSQMPKA  515
            +G +RI+L + PHF+  G ++ LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  351 bits (1318),  Expect = 7e-98, Method: Compositional matrix adjust.
 Identities = 187/452 (42%), Positives = 325/452 (72%), Gaps = 5/452 (1%)

Query  66   GMQVFIECLTKSGSKVEKLDKHLIDHHIAALDDQISRQLDAVMHHEDFQAVESLWRGVKS  125
            G+  FI  + K++S  +K++K  +D+ IA +DD ISRQ+D ++H+E++Q +ES WRG+  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  126  LVDKTDFRQNVKIELLDMSKEDLRQDFEDSPEIIQSGLYKHTYIDEYDTPGGEPIAALIS  185
            LV++T+F++N+KI+L+D++K++  +DFE +P+I  + LYK+ Y  EY+  GGEP++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  186  AYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPTFFLKDSMEEVAAIKDIGNYFDRAEY  245
             Y ++AS+ D+ +L ++S ++A +H PF+ S ++ FF  D+  E++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  246  IKWKSFRETDDSRYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFA  305
            +KW++FRE +DS+Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  306  FASNMVRSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA  365
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  366  NLGFIPLSYYRNRDYACFFSANSTQKPALY----DTADATANSRINARLPYIFLLSRIAH  421
            + GFI+++  R+ + A FFSAN++ KP ++    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  422  YLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMSDPGDELQASHPLRDAKVTVEDIEDN  481
            YLK++QRE+IG+ K+R  +E  LN W+R  V++  +P  E+++ +P+R+AKV V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  482  PGFFRVKLYAIPHFQVEGMDVNLSLVSQMPKA  513
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  350 bits (1314),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 182/442 (42%), Positives = 321/442 (73%), Gaps = 5/442 (1%)

Query  76   QSGSTVEKLDKTLLDHHIARLDGQISRQLDAVMHHDAFQQVESLWRGLKSLVDKTDFRQN  135
            +++S+ +K++K  LD+ IA++D+ ISRQ+D ++H++ +QQ+ES WRGL  LV++T+F++N
Sbjct  50   KTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQEN  109

Query  136  VKIDVLDLSKADLLQDFEDAPEIIQSGLYAHTYIAEYDTPGGEPIGALISSYEFDASAQD  195
            +KI+++D++K + L+DFE  P+I  + LY + Y +EY+  GGEP+GA+++ Y ++AS+ D
Sbjct  110  IKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPD  169

Query  196  VALLRNISKVAASAHMPFIGSAGPQFFLKDNMEDVAAIKDIGNYFDRAEYIKWKAFRETD  255
            + +L ++S +AA +H PF+ S ++ FF  DN  +++ I+D+   ++ ++Y+KW++FRE +
Sbjct  170  MNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENE  229

Query  256  DARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFAFAANMVKSFI  315
            D++Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +AFA+ +  SF 
Sbjct  230  DSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYAFATRLTDSFA  288

Query  316  NNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYY  375
            N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A+ GFI+++  
Sbjct  289  NYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLR  348

Query  376  KNRDYSCFFSANSTQKPALY----DTADATANSRINSRLPYIFLLSRIAHYLKLIQRENI  431
            ++ + + FFSAN++ KP ++    +  +A +N R+ ++LPYIFL+SR+AHYLK++QRE+I
Sbjct  349  RDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEI  408

Query  432  GTTKDRRLLELELNTWVRGLVTEMTDPGDELQASHPLRDAKVIVEDIEDNPGFFRVRLFA  491
            G+ K+R  +E  LN W+R  V++  +P  E+++ +P+R+AKV+V +IE+++G +R+ L  
Sbjct  409  GSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNV  468

Query  492  IPHFQVEGMDVNLSLVSQMPKA  513
             PHF+  G + +LSLV+++ + 
Sbjct  469  RPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  350 bits (1316),  Expect = 9e-98, Method: Compositional matrix adjust.
 Identities = 187/452 (42%), Positives = 325/452 (72%), Gaps = 5/452 (1%)

Query  50   GMQVFIECLTKSGSKVEKLDKHLIDHHIAALDDQISRQLDAVMHHEDFQAVESLWRGVKS  109
            G+  FI  + K++S  +K++K  +D+ IA +DD ISRQ+D ++H+E++Q +ES WRG+  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  110  LVDKTDFRQNVKIELLDMSKEDLRQDFEDSPEIIQSGLYKHTYIDEYDTPGGEPIAALIS  169
            LV++T+F++N+KI+L+D++K++  +DFE +P+I  + LYK+ Y  EY+  GGEP++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  170  AYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPTFFLKDSMEEVAAIKDIGNYFDRAEY  229
             Y ++AS+ D+ +L ++S ++A +H PF+ S ++ FF  D+  E++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  230  IKWKSFRETDDSRYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFA  289
            +KW++FRE +DS+Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  290  FASNMVRSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA  349
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  350  NLGFIPLSYYRNRDYACFFSANSTQKPALY----DTADATANSRINARLPYIFLLSRIAH  405
            + GFI+++  R+ + A FFSAN++ KP ++    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  406  YLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMSDPGDELQASHPLRDAKVTVEDIEDN  465
            YLK++QRE+IG+ K+R  +E  LN W+R  V++  +P  E+++ +P+R+AKV V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  466  PGFFRVKLYAIPHFQVEGMDVNLSLVSQMPKA  497
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  346 bits (1301),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 324/452 (72%), Gaps = 5/452 (1%)

Query  64   AIQVFMQVISKSGQLVEKLDKSLLDSHIAELDYQISRQLDEVMHHPEFQRVESLWRGLKH  123
            ++  F+  I K++   +K++K  LD  IA++D  ISRQ+DE++H+ ++Q++ES WRGL  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  124  TVDRTDFRQNVKIEILDVSKDDLRQDFEDAPEIIQSGLYHHTYSMEYDQPGGEPIAAIIS  183
             V+RT+F++N+KI+++DV+K++  +DFE  P+I  + LY + YS EY+Q GGEP++AI++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  184  SYEFDSSAQDVALLRNISKVSAAAHMPFIGSVGPKFFHKSSMEEVAAIKDIGNYFDRAEY  243
             Y +++S+ D+ +L ++S ++A +H PF+ S+++ FF   +  E++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  244  IKWKAFRDSEDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTNASFA  303
            +KW++FR++EDS+Y GL + R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  304  FAANMVKSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFS  363
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E++
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  364  NLGFIPLSYYKNRDYSCFFSANSAQKPALY----DTADATANSRINARLPYIFLLSRIAH  419
            + GFI+++  ++ + + FFSAN+A KP ++    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  420  YLKLIQRENIGTTKDRRLLELELNTWVKGLVTEMTDPGDDLQASHPLRDAKVIVEDIEDN  479
            YLK++QRE+IG+ K+R  +E  LN W++  V++  +P  ++++ +P+R+AKV+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  480  PGFFRVKLFAVPHFQVEGIDVNLSLVSQMPKA  511
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  346 bits (1301),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 327/452 (73%), Gaps = 5/452 (1%)

Query  66   GMQVFLECLTKAGSKVEKLDKNLIDHHIAELDYQISRQLDAVMHSEEFQAVESLWRGVKS  125
            G+  F+  + K++S  +K++K  +D+ IA++D  ISRQ+D ++H+E++Q +ES WRG+  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  126  LVDKTDFRQNVKVELLDMSKEDLRQDFEDSPEIIQSGLYKHTYIDEYDTPGGEPIAALIS  185
            LV++T+F++N+K++L+D++K++  +DFE +P+I  + LYK+ Y  EY+  GGEP++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  186  AYEFDASAQDVALLRNISKVAAAAHMPFIGSAGPAFFLKNSMEEVAAIKDIGNYFDRAEY  245
             Y ++AS+ D+ +L ++S +AA +H PF+ S +++FF  ++  E++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  246  IKWKSFRETDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFA  305
            +KW++FRE +D++Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  306  FASNMVRSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA  365
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  366  NLGFIPLSYYKNRDFAAFFSANSTQKPAIY----DTADATANSRINARLPYIFLLSRIAH  421
            + GFI+++  ++ + A FFSAN++ KP I+    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  422  YLKLIQRENIGTTKDRRLLELELNTWVKSLVTEMTDPGDELQASHPLRDAKVVVEDIEDN  481
            YLK++QRE+IG+ K+R  +E  LN W++  V++  +P  E+++ +P+R+AKV+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  482  PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKA  513
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  346 bits (1298),  Expect = 3e-96, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 326/452 (73%), Gaps = 5/452 (1%)

Query  64   GMQVFLECLTKSGSKIEKLDKTLIDHHIAELDYQISRQLDAVMHSEEFQAVESLWRGVKS  123
            G+  F+  + K++S  +K++K  +D+ IA++D  ISRQ+D ++H+E++Q +ES WRG+  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  124  LVDKTDFRQNVKIELLDMSKEDLRQDFEDSPEIIQSGLYKHTYIDEYDTPGGEPIAALIS  183
            LV++T+F++N+KI+L+D++K++  +DFE +P+I  + LYK+ Y  EY+  GGEP++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  184  AYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPKFFLKDSMEDVAAIKDIGNYFDRAEY  243
             Y ++AS+ D+ +L ++S ++A +H PF+ S ++ FF  D+  +++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  244  IKWKSFRETDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFA  303
            +KW++FRE +D++Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  304  FASNMVKSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA  363
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  364  NLGFIPLSYYKNRDYACFFSANSTQKPALY----DTADATANSRINARLPYIFLLSRIAH  419
            + GFI+++  ++ + A FFSAN++ KP ++    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  420  YLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDAKVVVEDIEDN  479
            YLK++QRE+IG+ K+R  +E  LN W+R  V++  +P  E+++ +P+R+AKV+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  480  PGFFRVKLYAIPHFQVEGMDVNLSLVSQMPKA  511
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  345 bits (1295),  Expect = 5e-96, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 326/452 (73%), Gaps = 5/452 (1%)

Query  67   AVQVFMQCLQKSGQKVEKLDKTLLDHHIAELDFQISRQLDKVMHSDEFQKTESVWRGLKS  126
            +V  F+  + K++   +K++K  LD+ IA++D  ISRQ+D ++H++++Q+ ES WRGL  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  127  LVDKTDFRQNVKIEILDLSKDELRQDFEDSPEIIQSGLYRQTYTMEYDTPGGEPIAAVIS  186
            LV++T+F++N+KI+++D++K+E  +DFE +P+I  + LY++ Y+ EY+  GGEP++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  187  AYEFDASAQDVALMRNISKVSAAAHMPFIGSAGPAFFLKENMEQVAAIKDIGNYFDRAEY  246
             Y ++AS+ D+ ++ ++S ++A +H PF+ S +++FF  +N  +++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  247  IKWKSFRETDDSRYLGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFA  306
            +KW++FRE +DS+Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  307  FAANMVKSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGKQVKIPSEVMIPETREFEFA  366
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  367  SLGFIPLSYYKNRDYACFFSANSTQKPALY----DTADATANSRINARLPYIFLLSRIAH  422
              GFI+++  ++ + A FFSAN++ KP ++    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  423  YLKLIQRENIGSTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDAKVVVEDIEDN  482
            YLK++QRE+IGS K+R  +E  LN W+R  V++  +P  E+++ +P+R+AKV+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  483  PGFFRVKLYAIPHFQVEGMDVNLSLVSQMPKA  514
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  345 bits (1295),  Expect = 5e-96, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 326/452 (73%), Gaps = 5/452 (1%)

Query  67   AVQVFMQCLQKSGQKVEKLDKTLLDHHIAELDFQISRQLDKVMHSDEFQKTESVWRGLKS  126
            +V  F+  + K++   +K++K  LD+ IA++D  ISRQ+D ++H++++Q+ ES WRGL  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  127  LVDKTDFRQNVKIEILDLSKDELRQDFEDSPEIIQSGLYRQTYTMEYDTPGGEPIAAVIS  186
            LV++T+F++N+KI+++D++K+E  +DFE +P+I  + LY++ Y+ EY+  GGEP++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  187  AYEFDASAQDVALMRNISKVSAAAHMPFIGSAGPAFFLKENMEQVAAIKDIGNYFDRAEY  246
             Y ++AS+ D+ ++ ++S ++A +H PF+ S +++FF  +N  +++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  247  IKWKSFRETDDSRYLGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFA  306
            +KW++FRE +DS+Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  307  FAANMVKSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGKQVKIPSEVMIPETREFEFA  366
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  367  SLGFIPLSYYKNRDYACFFSANSTQKPALY----DTADATANSRINARLPYIFLLSRIAH  422
              GFI+++  ++ + A FFSAN++ KP ++    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  423  YLKLIQRENIGSTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDAKVVVEDIEDN  482
            YLK++QRE+IGS K+R  +E  LN W+R  V++  +P  E+++ +P+R+AKV+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  483  PGFFRVKLYAIPHFQVEGMDVNLSLVSQMPKA  514
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  344 bits (1290),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 181/452 (41%), Positives = 315/452 (70%), Gaps = 5/452 (1%)

Query  69   GIGAFLELVAQSSQPVERLDKSLLDFHIGQLDRQISRQLDAVLHSPEFQALEGRWRGLKM  128
            G+  F+  + ++  + ++++K  LD  I+++D  ISRQ+D +LH+ ++Q LE+ WRGL  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  129  LVSRTDFRKYARIEVLDVSKDALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISALIS  188
            LV RT+F+   +I+++DV+K+    DFE  P++  + LY+  Y  EY+  GG+P++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  189  DFEFANSPQDVALLRNISKVAAAAHMPFIGSVGAAFFGKKSMEEVAAIQDIGNYFDRAEY  248
            D+ +  S  D+ +L ++S +AA +H PF+ S++A+FFG  +  E++ IQD+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  249  IKWKSFRDTDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDRYLWVNASFA  308
            +KW++FR+ +D++Y GL + R L R PY  +  P++ FNY E V  + H++ LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  309  FAANMTRSFVNNGWCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA  368
            FA+ +T SF N  WC +I GP+AGG V DLP  +Y+     Q+KIPTEVLI +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  369  NLGFIPLSFYKNHDFACFFSANSTQKPALY----ETKEATANSRINARLPYIFLLSRIAH  424
            + GFI++++ ++ + A FFSAN++ KP ++    E KEA +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  425  YLKLIQRENIGTTKDRRLLEIELNNWIKGLVTEMKDPGDELQASHPLREAKVTVEDIDDN  484
            YLK++QRE+IG+ K+R  +E  LN+W++  V++  +P  E+++ +P+R AKV V +I+++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  485  PGFFRIKLFIIPHFQVEGMDIGLSLVSQMPKA  516
            +G +RI+L + PHF+  G ++ LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  344 bits (1291),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 324/452 (72%), Gaps = 5/452 (1%)

Query  64   GMQVFLECLTKSGSKVEKLDRNLIDHHIAQLDYQISRQLDAVMHHEAFQAVESLWCGLKS  123
            G+  F+  + K++S  +K+++  +D+ IA++D  ISRQ+D ++H+E +Q +ES W GL  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  124  LVDKTDFRQNVKIELLDLSKDDLRQDFEDSPEIIQSGLYKHTYIDEYDTPGGEPIAALIS  183
            LV++T+F++N+KI+L+D++K++  +DFE +P+I  + LYK+ Y  EY+  GGEP++A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  184  AYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPKFFLKDAMADVAAIKDIGNYFDRAEY  243
             Y ++AS+ D+ +L ++S ++A +H PF+ S ++ FF  D  A+++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  244  IKWKSFRETDDSRYIGLVMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDKYLWTNASFA  303
            +KW++FRE +DS+Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  304  FAANMVRSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA  363
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  364  NLGFIPLSYYKNRDYACFFSANSTQKPALY----DTADATANSRINARLPYIFLLSRIAH  419
            + GFI+++  ++ + A FFSAN++ KP ++    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  420  YLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDAKVVVEDIDDN  479
            YLK++QRE+IG+ K+R  +E  LN W+R  V++  +P  E+++ +P+R+AKV+V +I+++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  480  PGFFRVKLYAIPHFQVEGMDVNLSLVSQMPKA  511
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  343 bits (1286),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 323/452 (72%), Gaps = 5/452 (1%)

Query  66   GMQVFLECLTKSGSKVEKLDRTLIDHHIAELDYQISRQLDRVMHHEAFQSVESLWRGVKS  125
            G+  F+  + K++S  +K+++  +D+ IA++D  ISRQ+D ++H+E +Q +ES WRG+  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  126  LVDKTDFRQNVKIELLDLSKDDLRQDFEDAPEIIQSGLYKHTYIDEYDTPGGEPIGALIS  185
            LV++T+F++N+KI+L+D++K++  +DFE  P+I  + LYK+ Y  EY+  GGEP+GA+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  186  AYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPKFFLKDNMEDVAAIKDIGNYFDRAEY  245
             Y ++AS+ D+ +L ++S ++A +H PF+ S ++ FF  DN  +++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  246  IKWKSFRETDDSRYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFA  305
            +KW++FRE +DS+Y GL++ R L R PY P+  P++ FNY E+V  + H+  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  306  FAANMVRSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA  365
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  366  NLGFIPLSYYKNRDYSCFFSANSTQKPALY----DTADATANSRINARLPYIFLLSRIAH  421
            + GFI+++  ++ + + FFSAN++ KP ++    +  +A +N R+ ++LPYIFL+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  422  YLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN  481
            YLK++QRE+IG+ K+R  +E  LN W+R  V++  +P  ++++ +P+R+AKV V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  482  PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKA  513
            +G +R++L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  338 bits (1270),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 181/452 (41%), Positives = 323/452 (72%), Gaps = 5/452 (1%)

Query  66   GMRVFLDCLSKAGSKVEKLDKSLIDHHIAELDYQISRQLDAVMHHEAFQRVESLWRGVKS  125
            G+  F+  + K++S  +K++K  +D+ IA++D  ISRQ+D ++H+E +Q++ES WRG+  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  126  LVDKTDFRQNVKIALLDLSKEDLRQDFEDAPEIIQSGLYQHTYTAEYDSPGGEPVAALIS  185
            LV++T+F++N+KI L+D++K++  +DFE  P+I  + LY++ Y++EY+  GGEPV+A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  186  AYEFDASAQDVALLRHISNVSAAAHMPFIGSAGAQFFLKESMEEVAAIKDIGNYFDRAEY  245
             Y ++AS+ D+ +L  +S+++A +H PF+ S +A FF  ++  E++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  246  IKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTMPVRSFNYVEEVKGPDHNKYLWTNASFA  305
            +KW++FR+ +DS+Y GL++ R L R PY P+  P++ FNY E+V  + HN  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  306  FAANMVKSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA  365
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  366  NLGFIPLSYYKNRDYACFFSANSTQKPVRY----DTADATANSRINSRLPYILLLSRIAH  421
            + GFI+++  ++ + A FFSAN++ KP  +    +  +A +N R+ ++LPYI+L+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  422  YLKLIQRENIGTTKDRRLLELELNTWVRGLVTEMTDPGDSLQASHPLRDARVVVEDIEDN  481
            YLK++QRE+IG+ K+R  +E  LN W+R  V++  +P   +++ +P+R+A+V+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  482  PGFFRVRLFAVPHFQVEGMDVNLSLVSQMPKA  513
            +G +R+ L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  338 bits (1270),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 181/452 (41%), Positives = 323/452 (72%), Gaps = 5/452 (1%)

Query  66   GMRVFLDCLSKAGSKVEKLDKSLIDHHIAELDYQISRQLDAVMHHEAFQRVESLWRGVKS  125
            G+  F+  + K++S  +K++K  +D+ IA++D  ISRQ+D ++H+E +Q++ES WRG+  
Sbjct  40   GVVEFITEIVKTDSAENKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYF  99

Query  126  LVDKTDFRQNVKIALLDLSKEDLRQDFEDAPEIIQSGLYQHTYTAEYDSPGGEPVAALIS  185
            LV++T+F++N+KI L+D++K++  +DFE  P+I  + LY++ Y++EY+  GGEPV+A+++
Sbjct  100  LVERTNFQENIKINLFDVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILG  159

Query  186  AYEFDASAQDVALLRHISNVSAAAHMPFIGSAGAQFFLKESMEEVAAIKDIGNYFDRAEY  245
             Y ++AS+ D+ +L  +S+++A +H PF+ S +A FF  ++  E++ I+D+   ++ ++Y
Sbjct  160  DYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQY  219

Query  246  IKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTMPVRSFNYVEEVKGPDHNKYLWTNASFA  305
            +KW++FR+ +DS+Y GL++ R L R PY P+  P++ FNY E+V  + HN  LW N+ +A
Sbjct  220  VKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYA  278

Query  306  FAANMVKSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA  365
            FA+ +  SF N  WC +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A
Sbjct  279  FATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELA  338

Query  366  NLGFIPLSYYKNRDYACFFSANSTQKPVRY----DTADATANSRINSRLPYILLLSRIAH  421
            + GFI+++  ++ + A FFSAN++ KP  +    +  +A +N R+ ++LPYI+L+SR+AH
Sbjct  339  ESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAH  398

Query  422  YLKLIQRENIGTTKDRRLLELELNTWVRGLVTEMTDPGDSLQASHPLRDARVVVEDIEDN  481
            YLK++QRE+IG+ K+R  +E  LN W+R  V++  +P   +++ +P+R+A+V+V +IE++
Sbjct  399  YLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGE  458

Query  482  PGFFRVRLFAVPHFQVEGMDVNLSLVSQMPKA  513
            +G +R+ L   PHF+  G + +LSLV+++ + 
Sbjct  459  AGWYRINLNVRPHFKFMGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  336 bits (1260),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 178/436 (41%), Positives = 315/436 (73%), Gaps = 5/436 (1%)

Query  80   EKLDKTLLDHHIAQLDQQISRQLDLVMHHPIFQQVESTWRGLKSLVDKADFRQNVKIALL  139
            +K++K  LD+ IA++D+ ISRQ+D ++H+  +QQ+ESTWRGL  LV++++F++N+KI L+
Sbjct  56   NKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLF  115

Query  140  DLSKEALRQDFEDSPEIIQSGLYLQTYVSEYDTPGGEPIAAIISAWEFDASAQDVALLRN  199
            D++K+   +DFE +P+I  + LY + Y SEY+  GGEP++AI++   ++AS+ D+ +L +
Sbjct  116  DVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSK  175

Query  200  IAKVASSAHMPFIGSVGPAFFLKENMEEVAAIKDIGNYFDRAEYIKWQAFRESDDARYIG  259
            ++ +A+ +H PF+ S++++FF  +N  E++ I+D+   ++ ++Y+KW++FRE++D++Y G
Sbjct  176  MSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAG  235

Query  260  LTMPRVLGRLPYGPDTLPVRSFNYMEEVKGPDHDKYLWISASFAFATNMVRSFIHNGWCV  319
            L + R L R PY P+  P++ FNY E+V  + H+  LW ++ +AFAT +  SF +  WC 
Sbjct  236  LLVTRFLTRSPYEPQENPIKKFNYKENVHNS-HNHLLWGNTIYAFATRLTDSFANYRWCG  294

Query  320  QIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFASLGFIPLSYYKNRDYA  379
            +I GP+AGGAV+DLP  +Y+     Q KIP+EV+I +  E+E+A  GFI+++  ++ + A
Sbjct  295  NIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNA  354

Query  380  CFFSANSTQKPLQF----DTADATANSRINARLPYIFLLSRIAHYLKMIQRENIGTTKDR  435
             FFSAN++ KP  F    +  +A +N R+ ++LPYIFL+SR+AHYLK++QRE+IG+ K+R
Sbjct  355  VFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKER  414

Query  436  RLLEMELNAWVRSLVTEMTDPGDDLQASHPLRDARVVVEDIEDNPGFFRVKLFAVPHFQV  495
              +E  LN W+R  V++  +P  ++++ +P+R+A+V+V +IE+++G +R++L   PHF+ 
Sbjct  415  ADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKF  474

Query  496  EGMDVNLSLVSQMPKA  511
             G + +LSLV+++ + 
Sbjct  475  MGANFELSLVGKLDRE  490

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  329 bits (1236),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 191/433 (45%), Positives = 316/433 (73%), Gaps = 6/433 (1%)

Query  75   ERIDKALLDEYIARIDAAVSEQLDAVLHHPEFQRVESAWRSLRFLVERSDPKANIKLELL  134
            ++I+K  LDE IA+ID  +S Q+D +LH+ ++Q++ES+WR+L FLVER++ + NIK++L+
Sbjct  56   NKINKYTLDEMIAHIDDIISRQMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLF  115

Query  135  DVSKEELAGELEDVTDITQSGLYQHVYVQEYDTPGGEPLAAMVSNYEFDCSAADINLLTE  194
            DV+K+E   ++E   DIT + LY+++Y  EY+  GGEP++A++++Y ++ S++D+N+L+ 
Sbjct  116  DVTKQEALEDFEANPDITTATLYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSK  175

Query  195  VSRIAAAAHCPFLGAVGRDFFGKASLDEVVRIPDIASYLDKAEYARWRGFRDTEDARYVG  254
            +S IAA +H PFL +++ +FFG  +  E+ +I D+ + L+ ++Y +WR FR+ ED++Y G
Sbjct  176  MSSIAAMSHAPFLTSMSAGFFGLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAG  235

Query  255  LTLPRFLLRLPYGA-DNPTRAFDYRENVTGVDHDRYLWGnaafafaanmaRSFKAYGWTV  313
            L + RFL R PY + +NP + F+Y+ENV    H++ LWGN+ +AFA+ ++ SF  Y W  
Sbjct  236  LLVTRFLTRSPYEPQENPIKKFNYKENVHN-SHNHLLWGNTIYAFATRLTDSFANYRWCG  294

Query  314  NIRGPESGGKLEQLPIHVFDLGRGAQTKTPTEVLISENREIELAEAGFIPLSFYKNSDYA  373
            NI GP +GG + +LP  +++    +Q+K PTEVLI++  E ELAE+GFI++++ ++S+ A
Sbjct  295  NIIGPKAGGAVKDLPTYIYESFGTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNA  354

Query  374  CFFSANSAQRPARYNSPAATANA----RINARLPYIFLVSRLAHYLKVLQRENIGSAKSR  429
             FFSAN+A +P  + + +   +A    R+ ++LPYIFLVSRLAHYLKVLQRE+IGS K R
Sbjct  355  VFFSANAALKPKIFPNTPEGKEAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKER  414

Query  430  QDLENELNDWLQGLVTKMQNPDPDLVATRPLRegvveveevpeNPGFYRVNMSVMPHFQI  489
             D+EN LN+W++  V+  +NP +++ + RP+R + V V E+  ++G YR+N++V PHF++
Sbjct  415  ADIENGLNEWMRQYVSDQENPPAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKF  474

Query  490  EGIDLKLSLVSQL  502
             G ++ LSLV++L
Sbjct  475  MGANFELSLVGKL  487

> NC_004917_P1|15|G15|32265746|NP_859778.1|Helicobacter_hepaticus_ATCC_51449|-|15102..16574|-|HH0247|hypothetical 
protein
Length=490

 Score =  298 bits (1116),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 166/412 (41%), Positives = 288/412 (70%), Gaps = 5/412 (1%)

Query  83   QLDAILHHKEFQRVEARWRGLNYLVMNTETSTRLKLRVLNVKKDELRKDFEAAADFDRSA  142
            Q+D ILH+ ++Q++E+ WRGL +LV  T+    +K+ +++V K+E   DFEA +D+  ++
Sbjct  77   QMDEILHNEQIQQLESTWRGLYFLVERTNFQENIKINLFDVTKQEALEDFEANPDITTAT  136

Query  143  VFKKVYEEEYGTFGGAPYGMLVGDYEFDGTNPDVSLLTELSKVaaaahapfiaaaSPELF  202
            ++K++Y  EYG FGG P G ++GDY ++++ PD+++L+ +S +AA +HAPF+++ S+ +F
Sbjct  137  LYKRIYSSEYGQFGGEPVGAILGDYALNASTPDMNFLSKMSSIAAMSHAPFLTSMSAGFF  196

Query  203  DMPSFTQIGVPGDLAKIFESTQLIKWREFRESEDSRYVGLVLPHVLMRLPYGPKGVPVEG  262
            ++ +++++    DL  ++E+ Q +KWR FRE+EDS+Y GL++ + L R PY P+  P+  
Sbjct  197  GLDNYAELPKIQDLKALLEGPQYVKWRTFRENEDSKYAGLLVTRFLTRSPYEPQENPIKK  256

Query  263  FNYEEQVGEGDGNFLWGNAAYALTQRITNAFALYGWCAAIRGVEGGGLVENLPLHTFKTS  322
            FNY E+V +++ ++LWGN+ YA++ R+T++FA Y WC+ I G  +GG V +LP   + + 
Sbjct  257  FNYKENVHNSHNHLLWGNTIYAFATRLTDSFANYRWCGNIIGPKAGGAVKDLPTYIYESF  316

Query  323  EGDIVAKIPTEVAITDRRENELSELGFIGLCYKKGSAQAAFFGGSTTNKPKAYNLP----  378
             G   +KIPTEV ITDR E EL+E GFI++  +++S +A FF+++++ KPK +       
Sbjct  317  -GTTQSKIPTEVLITDRCEYELAESGFIAFTLRRDSNNAVFFSANAALKPKIFPNTPEGK  375

Query  379  QANANARLSAQLPYILAASRFAHYVKVLMRDKIGSFSSQEGVSNYLNNWIADYVLLNDTA  438
            +A++N RL++QLPYI+  SR+AHY+KVL R+ IGS   + ++ N LN+W+ +YV  ++ +
Sbjct  376  EAETNYRLGTQLPYIFLVSRLAHYLKVLQREEIGSWKERADIENGLNEWMRQYVSDQENP  435

Query  439  GQETKARLPLREARVDVSEVPGKPGAYRAVVFLKPHFQLNELSVSMRLVAEL  490
              E ++R P+R A+V VSE+ G +G YR  + ++PHF++   +  + LV+ L
Sbjct  436  PAEVRSRRPFRGAKVLVSEIEGEAGWYRINLNVRPHFKFMGANFELSLVGKL  487