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Homologs of HP0536 gene of AB120419

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HMPREF4655_21066
( YP_005770153.1 )

cag pathogenicity island protein

NC_017360
(Helicobacter pylori 35A)

8e-33

2) HMPREF0462_0881
( YP_005785448.1 )

cag pathogenicity island protein

NC_017375
(Helicobacter pylori 83)

3e-32

3) HPSH_04210
( YP_001910307.1 )

cag pathogenicity island protein CagP

NC_010698
(Helicobacter pylori Shi470)

4e-32

4) HPV225_0539
( YP_005763470.1 )

cag pathogenicity island protein (cagP)

NC_017355
(Helicobacter pylori v225d)

4e-32

5) HPKB_0807
( YP_005762315.1 )

cag island protein

NC_017354
(Helicobacter pylori 52)

6e-32

6) cagP
( NP_223202.1 )

cag island protein

NC_000921
(Helicobacter pylori J99)

1e-31

7) HP0536
( NP_207332.1 )

cag pathogenicity island protein (cag15)

NC_000915
(Helicobacter pylori 26695)

7e-32

8) cagP
( YP_005793176.1 )

cag pathogenicity island protein P

NC_017382
(Helicobacter pylori 51)

7e-32

9) cagP
( YP_002301177.1 )

cag pathogenicity island protein P

NC_011498
(Helicobacter pylori P12)

3e-30

• Sequence Alignments

1) HMPREF4655_21066 in NC_017360


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  132 bits (486),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 111/114 (98%), Positives = 114/114 (100%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsviskyyllNHANFTMKLIILMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLS+ISKYYLL+HANFTMKLIILMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114

2) HMPREF0462_0881 in NC_017375


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 112/114 (99%), Positives = 114/114 (100%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsiiskyyllsHANFTMKLIMLMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLI+LMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114

3) HPSH_04210 in NC_010698


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 111/114 (98%), Positives = 113/114 (99%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALITKPsffyyttyllllvslsviskyyllsHANFTMKLIILMTQWQNWFL  114
            FLFALI KPSFFYYTTYLLLLVSLS+ISKYYLLSHANFTMKLIILMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114

4) HPV225_0539 in NC_017355


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 111/114 (98%), Positives = 113/114 (99%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALITKPsffyyttyllllvslsviskyyllsHANFTMKLIILMTQWQNWFL  114
            FLFALI KPSFFYYTTYLLLLVSLS+ISKYYLLSHANFTMKLIILMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114

5) HPKB_0807 in NC_017354


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  130 bits (475),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 110/114 (97%), Positives = 113/114 (99%), Gaps = 0/114 (0%)

Query  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            MKQPISKLKQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALITKPsffyyttyllllvslsviskyyllsHANFTMKLIMLMTQWQNWFL  114
            FLFALI KPSFFYYTTYLLLLVSLS+ISKYYLLSHANFTMKLI+LMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114

6) cagP in NC_000921


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 110/114 (97%), Positives = 114/114 (100%), Gaps = 0/114 (0%)

Query  1    MKRPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIALFSYGAGVILVYPIL  60
            MK+PISKLKQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFLI+LFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsiiskyyllsHANFTMKLIMLMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLI+LMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114

7) HP0536 in NC_000915


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  129 bits (474),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 110/114 (97%), Positives = 114/114 (100%), Gaps = 0/114 (0%)

Query  1    MKRPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLVALFSYGAGVILVYPIL  60
            MK+PISKLKQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFL++LFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsiiskyyllsHANFTMKLIILMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114

8) cagP in NC_017382


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  129 bits (474),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 110/114 (97%), Positives = 113/114 (99%), Gaps = 0/114 (0%)

Query  1    MEQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPIL  60
            M QPISKLKQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFLIGLFSYGAGVILVYPIL
Sbjct  1    MKQPISKLKQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVYPIL  60

Query  61   FLFALIIKPsffyyttyllllvslsviskyyllsHANFTMKLIMLMTQWQNWFL  114
            FLFALIIKPSFFYYTTYLLLLVSLS+ISKYYLLSHANFTMKLI+LMTQWQNWFL
Sbjct  61   FLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114

9) cagP in NC_011498


> AB120419|16|G16|46091425|BAD13869.1|Helicobacter_pylori_F32|-|21054..21398|HP0536|-|cag 
pathogenicity island protein
Length=114

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 110/117 (95%), Positives = 114/117 (98%), Gaps = 3/117 (2%)

Query  1    MKRPISKLSKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIALFSYGAGVILVY  60
            MK+PISKL   KQNFLQFKHSFNKHLDKYSLYY+LFNISSIVIGFLI+LFSYGAGVILVY
Sbjct  1    MKQPISKL---KQNFLQFKHSFNKHLDKYSLYYKLFNISSIVIGFLIGLFSYGAGVILVY  57

Query  61   PILFLFALIIKPsffyyttyllllvslsiiskyyllsHAKFTMKLIILMTQWQNWFL  117
            PILFLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHA+FTMKLIILMTQWQNWFL
Sbjct  58   PILFLFALIIKPSFFYYTTYLLLLVSLSIISKYYLLSHANFTMKLIILMTQWQNWFL  114