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Homologs of VC0835 gene of NC_002505_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) sbeH
( YP_004729203.1 )

pilin-related type II secretion protein

NC_015761
(Salmonella bongori NCTC 12419)

5e-90

2) A464_291
( YP_008320887.1 )

Toxin co-regulated pilus biosynthesis proteinT putative ATP-binding translocase of TcpA

NC_021870
(Salmonella bongori N268-08)

1e-89

3) Entcl_1011
( YP_003940567.1 )

type II secretion system protein E

NC_014618
(Enterobacter cloacae SCF1)

9e-89

4) Q7S_20055
( YP_005403787.1 )

toxin co-regulated pilus biosynthesis protein T

NC_017047
(Rahnella aquatilis HX2)

2e-88

5) Rahaq_3944
( YP_004214660.1 )

type II secretion system protein E

NC_015061
(Rahnella sp. Y9602)

2e-88

6) D782_0527
( YP_007338775.1 )

type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

NC_020063
(Enterobacteriaceae bacterium FGI 57)

1e-84

7) cfcH
( YP_003368059.1 )

type IV pilus biogenesis protein CfcH

NC_013716
(Citrobacter rodentium ICC168)

2e-84

• Sequence Alignments

1) O3Y_03885 in NC_016944


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  756 bits (2859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 503/503 (100%), Positives = 503/503 (100%), Gaps = 0/503 (0%)

Query  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60
            MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF
Sbjct  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60

Query  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120
            LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV
Sbjct  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120

Query  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180
            NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM
Sbjct  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180

Query  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVsgttgs  240
            PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS
Sbjct  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS  240

Query  241  gkstslkkYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300
            GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR
Sbjct  241  GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300

Query  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360
            SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI
Sbjct  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360

Query  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRllllet  420
            ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET
Sbjct  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET  420

Query  421  lvptvedlelvASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480
            LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF
Sbjct  421  LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480

Query  481  MLHFGQLDHEDENIIYENYLQEV  503
            MLHFGQLDHEDENIIYENYLQEV
Sbjct  481  MLHFGQLDHEDENIIYENYLQEV  503

2) VCD_003493 in NC_012668


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  756 bits (2859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 503/503 (100%), Positives = 503/503 (100%), Gaps = 0/503 (0%)

Query  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60
            MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF
Sbjct  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60

Query  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120
            LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV
Sbjct  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120

Query  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180
            NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM
Sbjct  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180

Query  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVsgttgs  240
            PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS
Sbjct  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS  240

Query  241  gkstslkkYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300
            GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR
Sbjct  241  GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300

Query  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360
            SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI
Sbjct  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360

Query  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRllllet  420
            ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET
Sbjct  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET  420

Query  421  lvptvedlelvASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480
            LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF
Sbjct  421  LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480

Query  481  MLHFGQLDHEDENIIYENYLQEV  503
            MLHFGQLDHEDENIIYENYLQEV
Sbjct  481  MLHFGQLDHEDENIIYENYLQEV  503

3) Vch1786_I0341 in NC_016445


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  756 bits (2859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 503/503 (100%), Positives = 503/503 (100%), Gaps = 0/503 (0%)

Query  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60
            MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF
Sbjct  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60

Query  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120
            LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV
Sbjct  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120

Query  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180
            NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM
Sbjct  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180

Query  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVsgttgs  240
            PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS
Sbjct  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS  240

Query  241  gkstslkkYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300
            GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR
Sbjct  241  GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300

Query  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360
            SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI
Sbjct  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360

Query  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRllllet  420
            ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET
Sbjct  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET  420

Query  421  lvptvedlelvASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480
            LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF
Sbjct  421  LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480

Query  481  MLHFGQLDHEDENIIYENYLQEV  503
            MLHFGQLDHEDENIIYENYLQEV
Sbjct  481  MLHFGQLDHEDENIIYENYLQEV  503

4) VC0835 in NC_002505


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  756 bits (2859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 503/503 (100%), Positives = 503/503 (100%), Gaps = 0/503 (0%)

Query  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60
            MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF
Sbjct  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60

Query  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120
            LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV
Sbjct  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120

Query  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180
            NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM
Sbjct  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180

Query  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVsgttgs  240
            PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS
Sbjct  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS  240

Query  241  gkstslkkYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300
            GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR
Sbjct  241  GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300

Query  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360
            SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI
Sbjct  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360

Query  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRllllet  420
            ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET
Sbjct  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET  420

Query  421  lvptvedlelvASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480
            LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF
Sbjct  421  LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480

Query  481  MLHFGQLDHEDENIIYENYLQEV  503
            MLHFGQLDHEDENIIYENYLQEV
Sbjct  481  MLHFGQLDHEDENIIYENYLQEV  503

5) tcpT in NC_012578


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  755 bits (2858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/503 (99%), Positives = 503/503 (100%), Gaps = 0/503 (0%)

Query  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60
            MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF
Sbjct  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60

Query  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120
            LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV
Sbjct  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120

Query  121  NGTMIDYREILSSEADSLMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180
            NGTMIDYREILSSEAD+LMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM
Sbjct  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180

Query  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVsgttgs  240
            PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS
Sbjct  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS  240

Query  241  gkstslkkYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300
            GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR
Sbjct  241  GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300

Query  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360
            SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI
Sbjct  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360

Query  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRllllet  420
            ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET
Sbjct  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET  420

Query  421  lvptvedlelvASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480
            LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF
Sbjct  421  LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480

Query  481  MLHFGQLDHEDENIIYENYLQEV  503
            MLHFGQLDHEDENIIYENYLQEV
Sbjct  481  MLHFGQLDHEDENIIYENYLQEV  503

6) tcpT in NC_012582


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  755 bits (2858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/503 (99%), Positives = 503/503 (100%), Gaps = 0/503 (0%)

Query  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60
            MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF
Sbjct  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60

Query  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120
            LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV
Sbjct  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120

Query  121  NGTMIDYREILSSEADSLMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180
            NGTMIDYREILSSEAD+LMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM
Sbjct  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180

Query  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVsgttgs  240
            PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS
Sbjct  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS  240

Query  241  gkstslkkYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300
            GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR
Sbjct  241  GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300

Query  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360
            SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI
Sbjct  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360

Query  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRllllet  420
            ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET
Sbjct  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET  420

Query  421  lvptvedlelvASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480
            LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF
Sbjct  421  LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480

Query  481  MLHFGQLDHEDENIIYENYLQEV  503
            MLHFGQLDHEDENIIYENYLQEV
Sbjct  481  MLHFGQLDHEDENIIYENYLQEV  503

7) tcpT in NC_009457


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  755 bits (2858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/503 (99%), Positives = 503/503 (100%), Gaps = 0/503 (0%)

Query  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60
            MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF
Sbjct  1    MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYF  60

Query  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120
            LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV
Sbjct  61   LVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRV  120

Query  121  NGTMIDYREILSSEADSLMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180
            NGTMIDYREILSSEAD+LMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM
Sbjct  121  NGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHM  180

Query  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVsgttgs  240
            PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS
Sbjct  181  PLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS  240

Query  241  gkstslkkYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300
            GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR
Sbjct  241  GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVR  300

Query  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360
            SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI
Sbjct  301  SAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKI  360

Query  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRllllet  420
            ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET
Sbjct  361  ASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLET  420

Query  421  lvptvedlelvASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480
            LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF
Sbjct  421  LVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF  480

Query  481  MLHFGQLDHEDENIIYENYLQEV  503
            MLHFGQLDHEDENIIYENYLQEV
Sbjct  481  MLHFGQLDHEDENIIYENYLQEV  503

8) tcpT in NC_006841


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  372 bits (1399),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 227/453 (51%), Positives = 325/453 (72%), Gaps = 19/453 (4%)

Query  55   KYIVVPDEYFKLLDIKLL-ESHKLDLSKKTKSEERCLNIFKQAIINKASDVHFIRNDDTA  113
            KY++V+D   KLL  +L+ E +  DLS   K     ++I   A    ASD+HFIR+D   
Sbjct  58   KYFLVSDANHKLLIANLVTEQQAKDLSFIEKDI---MKIASSATAYGASDIHFIREDRIC  114

Query  114  KIKFRINGKVELQQEVLGTDCDEMLFVMYNVMASTKETTWNTKAPQDANILLDIENVSYR  173
            KIKFR+NG +   +E+L+++ D ++FV+YNVMA+TKETTWN K PQDANI+L I++ +YR
Sbjct  115  KIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYR  174

Query  174  FRYAHMPIFGKGTSGASYHAVVRVIYPNENKNVCTDLGILGLRKDEVVAIDHMLSNPSGL  233
            FRYAHMP+FG G  G +YHAVVR+IYP++N  VCT+   +G    +  AI ++L+ + GL
Sbjct  175  FRYAHMPLFGEG--GKNYHAVVRIIYPSNN-FVCTNYQDIGYNEADTDAIARILNTSYGL  231

Query  234  IVVSGVTGSGKSTALKNYMEYLFYTKYHEKGCFVTVEDPVEYVIEGAQQSSVTKSKNGS-  292
            ++VSG TGSGKST+LK+Y+E LF+ KY  KGCFVTVEDPVEY+I GAQQSS+   +++  
Sbjct  232  FIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKT  291

Query  293  -NLFSEAIRSSMRRDPDVLMIGEIRDLQTGSALSSAVESGHLCLTTVHAGNSVGVLQRLV  351
             N F++A+RS+MRRDPDV+MIGEIRD  T  ALSSAVESGH CLTT+HAG+ V+VLQRL 
Sbjct  292  KNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLS  351

Query  352  GLGIESDKLSTPDFIAGIMNQKLVPRICPDCAQESIND-YGRKI-KIQGDGCVECNFKGV  409
            GLG+ +DK+++P+F+AGI +QKL+P +CP C    +++ Y R +   + +GC  CN  G 
Sbjct  352  GLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANENGCEACNHSGF  411

Query  410  IGRILVIELMIPDFNILKLVSEHKWVDIY------SYLKAQRKPDNLTQGYSIKDKIYYL  463
             GR+L++E ++P  + L LV+ ++WV +Y       ++K+ +K   L +G+SIKDK YY 
Sbjct  412  KGRLLLLETLVPTVEDLELVASENWVSLYRKYRERRFIKTGKK--GLGEGFSIKDKAYYN  469

Query  464  SLTGQVCGNYFRSYFGYMENDDESLVFSVYQSE  496
             L G+VC +YF   FG ++++DE++++  Y  E
Sbjct  470  VLKGKVCHEYFMLHFGQLDHEDENIIYENYLQE  502

9) sbeH in NC_015761


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  325 bits (1218),  Expect = 5e-90, Method: Compositional matrix adjust.
 Identities = 201/455 (45%), Positives = 316/455 (70%), Gaps = 18/455 (3%)

Query  68   RIVLIKDNLYYSIF------ERLVKKNLSVREGV--VSTVQADLERLLQMAVDAGASDLH  119
            R+ L+K +  Y  F      ++L+  NL   +    +S ++ D+ ++   A   GASD+H
Sbjct  47   RVNLLKKDKVYKYFLVSDANHKLLIANLVTEQQAKDLSFIEKDIMKIASSATAYGASDIH  106

Query  120  ITRNDQLASVEFRVNGVLVPHSKILSSKCDELCFVLYNVQASTKETTWNRSVPQSANILY  179
            + R+D++  + FRVNG ++    ILSS  D L FVLYNV A+TKETTWNR +PQ ANI+ 
Sbjct  107  FIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIIL  166

Query  180  SLGGKSFRFRYAHFPIFGETTSCYHCVLRIIPAGVSNSTIPSLEKLGVSGDEVEDIKRVL  239
             +  K++RFRYAH P+FGE    YH V+RII ++ +N    + + +G +  + + I R+L
Sbjct  167  VINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPS-NNFVCTNYQDIGYNEADTDAIARIL  225

Query  240  SNPYGVYVVAgttgsgksttLKNLMEWLQKNRYSGKGCFLTIEDPVEYQIWGAKQSSVLD  299
            + +YG+++V+GTTGSGKST+LK+ +E L  N+Y GKGCF+T+EDPVEY I GA+QSS++ 
Sbjct  226  NTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVA  285

Query  300  VDGG----GFHSAIKSALRRDPDVLMVGEIRDNISANALAGAVESGHYCFTTVHAGNIVT  355
             +++     F  A++SA+RRDPDV+M+GEIRD+ + +AL++AVESGHYC+TT+HAG++V+
Sbjct  286  DNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVS  345

Query  356  LLQRLVALGVSSDKLSTPGFIAGLQCQKLLPVLCHHCKKENNHTVLGRHFPVFILNEEGC  415
            +LQRL +LG+ +DK+++PGF+AG+  QKL+P LC  CK    +    R  +VF  NE+GC
Sbjct  346  VLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDERYQR--AVFSANENGC  403

Query  416  EHCFYTGLKSRQLVIEYMRPTYDELKAIAESHWLEAYTIWRKKRFTTS---GIAEGFDLK  472
            E C  +G+K+R L++E + PT ++L  +A  +W+  Y   R +RF  +   G++EGF +K
Sbjct  404  EACNHSGFKGRLLLLETLVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIK  463

Query  473  EKAFHHVLKGNVCASWFSMEFGKVEEKDLEVLIEK  507
            +KA+ +VLKG+VC   F ++FG++++ D +++ E+
Sbjct  464  DKAYYNVLKGKVCHEYFMLHFGQLDHEDENIIYEN  498

10) A464_291 in NC_021870


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  324 bits (1214),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 192/416 (47%), Positives = 299/416 (72%), Gaps = 10/416 (2%)

Query  99   VQADLERLLQMAVDAGASDLHITRNDQLASVEFRVNGVLVPHSKILSSKCDELCFVLYNV  158
            ++ D+ ++   A   GASD+H+ R+D++  + FRVNG ++    ILSS  D L FVLYNV
Sbjct  86   IEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNV  145

Query  159  QASTKETTWNRSVPQSANILYSLGGKSFRFRYAHFPIFGETTSCYHCVLRIIPAGISNST  218
             A+TKETTWNR +PQ ANI+  +  K++RFRYAH P+FGE    YH V+RII ++ +N  
Sbjct  146  MATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPS-NNFV  204

Query  219  IPSLEKLGVSGDEVEDIKRVLSNPYGVYVVAgttgsgksttLKNLMEWLQKNRYSGKGCF  278
              + + +G +  + + I R+L+ +YG+++V+GTTGSGKST+LK+ +E L  N+Y GKGCF
Sbjct  205  CTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCF  264

Query  279  LTIEDPVEYQIWGAKQSSVLDVDGG----GFHSAIKSALRRDPDVLMVGEIRDNISANAL  334
            +T+EDPVEY I GA+QSS++  +++     F  A++SA+RRDPDV+M+GEIRD+ + +AL
Sbjct  265  VTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEAL  324

Query  335  AGAVESGHYCFTTVHAGNIVTLLQRLVALGVSSDKLSTPGFIAGLQCQKLLPVLCHHCKK  394
            ++AVESGHYC+TT+HAG++V++LQRL +LG+ +DK+++PGF+AG+  QKL+P LC  CK 
Sbjct  325  SSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKV  384

Query  395  ENNHTVLGRHFPVFILNEEGCEHCFYTGLKSRQLVIEYMRPTYDELKAIAESHWLEAYTI  454
               +    R  +VF  NE+GCE C  +G+K+R L++E + PT ++L  +A  +W+  Y  
Sbjct  385  SFVDERYQR--AVFSANENGCEACNHSGFKGRLLLLETLVPTVEDLELVASENWVSLYRK  442

Query  455  WRKKRFTTS---GIAEGFDLKEKAFHHVLKGNVCASWFSMEFGKVEEKDLEVLIEK  507
             R +RF  +   G++EGF +K+KA+ +VLKG+VC   F ++FG++++ D +++ E+
Sbjct  443  YRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYFMLHFGQLDHEDENIIYEN  498

11) Entcl_1011 in NC_014618


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  321 bits (1203),  Expect = 9e-89, Method: Compositional matrix adjust.
 Identities = 184/403 (46%), Positives = 302/403 (75%), Gaps = 14/403 (3%)

Query  115  GASDLHITRSDVMAKVELRINGVLMLDNQMLSTKCDELIFVLYNVQASTRDTTWNRAIAQ  174
            GASD+H+ R D + K+ +R+NG ++   ++LS+  D L+FVLYNV A+T++TTWNR ++Q
Sbjct  101  GASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQ  160

Query  175  SANILYTLNERSYRFRYEHYPIFGEVEGCYHCVLRIIPSGLSTVVNPDLGKIGVSEDEIN  234
             ANI+  +NE++YRFRY H P+FGE    YH V+RII ++ +  V  +   IG +E + +
Sbjct  161  DANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPS-NNFVCTNYQDIGYNEADTD  219

Query  235  DVKKILSNPYGVYFIAgttgsgksttLKNMMEWMQVNRYGDKGCFLTVEDPVEYQIYGAK  294
             + +IL+ +YG+++++GTTGSGKST+LK+ +E +  N+Y +KGCF+TVEDPVEY I GA+
Sbjct  220  AIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQ  279

Query  295  QSSVLDGES----GGFHTAIKSSLRRDPDVLMVGEIRDPVSSNALAGAVESGHYCFTTVH  350
            QSS++ ++       F  A++S++RRDPDV+M+GEIRD  + +AL++AVESGHYC+TT+H
Sbjct  280  QSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIH  339

Query  351  AGNIVTLLQRLSALGISSDKLSTPGFIAGLQCQKLIPVLCPNCKIKHDVNILGKEFE--L  408
            AG++V++LQRLS+LG+ +DK+++PGF+AG+  QKLIP LCP+CK    V++++  ++  +
Sbjct  340  AGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCK----VSFVDERYQRAV  395

Query  409  YKANDDGCGNCNFTGVKSRQLVMEYLIPTHRELDALANRQWLNVYSIWREKRLTSP---G  465
            + AN++GC  CN +G K+R L++E L+PT  +L+ +A+ +W+++Y   RE+R+      G
Sbjct  396  FSANENGCEACNHSGFKGRLLLLETLVPTVEDLELVASENWVSLYRKYRERRFIKTGKKG  455

Query  466  ISEGFDIKEKVFMHVLRKRACYHWFMMEFGQIQDADMEVLLEK  508
            ++EGF IK+K + +VL+ + C + FM++FGQ+++ D +++ E+
Sbjct  456  LGEGFSIKDKAYYNVLKGKVCHEYFMLHFGQLDHEDENIIYEN  498

12) Q7S_20055 in NC_017047


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  319 bits (1197),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 187/422 (45%), Positives = 304/422 (73%), Gaps = 14/422 (3%)

Query  95   DISETQKELEAILIEAVDMGASDLHITRNDILAQLEVRVNGMLLPMMQMPASKCDELVFV  154
            D+S  +K++  I   A   GASD+H+ R+D + ++  RVNG ++   ++ +S  D L+FV
Sbjct  82   DLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFV  141

Query  155  LYNVQASTRDTTWNRTIPQSANILYTLNGLSFRFRYAHFPIFGETNDCFHAVLRIIPSGL  214
            LYNV A+T++TTWNR +PQ ANI+  +N  ++RFRYAH P+FGE    +HAV+RII ++ 
Sbjct  142  LYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPS-  200

Query  215  SKGAVANLNKLGISEEELEDLKKILSNPYGAYFIAgttgsgksttLKNLMEWLQVNRYGN  274
            ++   +N + +G +E + + + +IL+ +YG ++++GTTGSGKST+LK+ +E L  N+Y  
Sbjct  201  NNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKG  260

Query  275  KGCFLTVEDPVEYQIFGAKQSSVVSVEG----GGFHSAIKSALRRDPDVLMVGEIRDSIS  330
            KGCF+TVEDPVEY I GA+QSS+V+ ++      F  A++SA+RRDPDV+M+GEIRD  +
Sbjct  261  KGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPT  320

Query  331  ANALAGAVESGHYCFTTVHAGNIVSLLQRLSAMGITSDKLSTPGFIAGLQCQKLVPVICP  390
             +AL++AVESGHYC+TT+HAG++VS+LQRLS++G+ +DK+++PGF+AG+  QKL+P +CP
Sbjct  321  VEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCP  380

Query  391  HCHHSVEITFGEK--LMTLYEQNERGCEKCKHTGISGRQLVMEYMRPTYDELAAISKQEW  448
             C     ++F +     +++  NE GCE C+H+G+ GR L++E + PT ++L  ++ ++W
Sbjct  381  SCK----VSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLETLVPTVEDLELVASENW  436

Query  449  LQVYTLWRKKRI---SSPGLSEGFEIKEKVFAEVLRGRVCATWFSMEFGDVDKDNSEIIH  505
            + +Y   R +R+   +  GL+EGF IK+K + +VL+G+VC   F ++FG++D ++ +II 
Sbjct  437  VSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYFMLHFGQLDHEDENIIY  496

Query  506  GK  507
             +
Sbjct  497  EN  498

13) Rahaq_3944 in NC_015061


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  319 bits (1197),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 187/422 (45%), Positives = 304/422 (73%), Gaps = 14/422 (3%)

Query  95   DISETQKELEAILIEAVDMGASDLHITRNDILAQLEVRVNGMLLPMMQMPASKCDELVFV  154
            D+S  +K++  I   A   GASD+H+ R+D + ++  RVNG ++   ++ +S  D L+FV
Sbjct  82   DLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFV  141

Query  155  LYNVQASTRDTTWNRTIPQSANILYTLNGLSFRFRYAHFPIFGETNDCFHAVLRIIPSGL  214
            LYNV A+T++TTWNR +PQ ANI+  +N  ++RFRYAH P+FGE    +HAV+RII ++ 
Sbjct  142  LYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPS-  200

Query  215  SKGAVANLNKLGISEEELEDLKKILSNPYGAYFIAgttgsgksttLKNLMEWLQVNRYGN  274
            ++   +N + +G +E + + + +IL+ +YG ++++GTTGSGKST+LK+ +E L  N+Y  
Sbjct  201  NNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKG  260

Query  275  KGCFLTVEDPVEYQIFGAKQSSVVSVEG----GGFHSAIKSALRRDPDVLMVGEIRDSIS  330
            KGCF+TVEDPVEY I GA+QSS+V+ ++      F  A++SA+RRDPDV+M+GEIRD  +
Sbjct  261  KGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPT  320

Query  331  ANALAGAVESGHYCFTTVHAGNIVSLLQRLSAMGITSDKLSTPGFIAGLQCQKLVPVICP  390
             +AL++AVESGHYC+TT+HAG++VS+LQRLS++G+ +DK+++PGF+AG+  QKL+P +CP
Sbjct  321  VEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCP  380

Query  391  HCHHSVEITFGEK--LMTLYEQNERGCEKCKHTGISGRQLVMEYMRPTYDELAAISKQEW  448
             C     ++F +     +++  NE GCE C+H+G+ GR L++E + PT ++L  ++ ++W
Sbjct  381  SCK----VSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLETLVPTVEDLELVASENW  436

Query  449  LQVYTLWRKKRI---SSPGLSEGFEIKEKVFAEVLRGRVCATWFSMEFGDVDKDNSEIIH  505
            + +Y   R +R+   +  GL+EGF IK+K + +VL+G+VC   F ++FG++D ++ +II 
Sbjct  437  VSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYFMLHFGQLDHEDENIIY  496

Query  506  GK  507
             +
Sbjct  497  EN  498

14) D782_0527 in NC_020063


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  307 bits (1150),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 203/487 (42%), Positives = 334/487 (69%), Gaps = 17/487 (3%)

Query  33   DEKEYLLIHTLTVDKMFEHQLQIARLKSMHKRPVVGLAKVTEE-EYYQVIEF---ISLKA  88
            D  E+++ ++  + K F+++ ++  L   + +  V L K      Y+ V +    + +  
Sbjct  14   DREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYFLVSDANHKLLIAN  73

Query  89   LNAAQGTIDITDTQKRLANILLRAVNMGASDLHITRNDVLALFEARVNGVLMPFMQIKSQ  148
            L + Q + D++  +K + +I   A   GASD+H+ R+D +  +  RVNG ++ + +I S 
Sbjct  74   LVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSS  133

Query  149  QCDELVFVLYNVEATTRDTTWNRAIPQNANILYSLEGKPFRFRYAHFPIFGETPDCYHAV  208
            + D L+FVLYNV ATT++TTWNR +PQ+ANI+  ++ K++RFRYAH P+FGE    YHAV
Sbjct  134  EADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAV  193

Query  209  LRIIPSGLQKNNVGSIDKIGVSDAEITDLKKILSNPYGAYVIAgttgsgksttlkslMEW  268
            +RII ++ ++    + + IG ++A+   + +IL+ +YG ++++GTTGSGKST+LK  +E 
Sbjct  194  VRIIYPS-NNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIEL  252

Query  269  LQINRYDDRGCFLTVEDPVEYQIYGAKQSSVVSVDG----GGFHAAIKSALRRDPDVLMV  324
            L +N+Y ++GCF+TVEDPVEY I GA+QSS+V+ ++      F  A++SA+RRDPDV+M+
Sbjct  253  LFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMI  312

Query  325  GEIRDSVSANALAGAVESGHYCFTTVHAGNIVSLLQRMSALGIGSDKLSTPGFIAGLQCQ  384
            GEIRD  + +AL++AVESGHYC+TT+HAG++VS+LQR+S+LG+ +DK+++PGF+AG+  Q
Sbjct  313  GEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQ  372

Query  385  KLVPVLCESCKQVHEVKTISGR-EFTLYKAGENGCPNCKHSGIKGRQLAMEYFLPTYEEL  443
            KL+P LC SCK    V  +  R + +++ A ENGC  C+HSG+KGR L +E ++PT E+L
Sbjct  373  KLIPELCPSCK----VSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLETLVPTVEDL  428

Query  444  ATISRQEWLNTYALWRKKR---VAAVGLAEGFEIREKVMAHVLKGRIDAKWYAMEFGVVA  500
              ++ ++W++ Y   R +R    +  GL+EGF I++K   +VLKG++    + ++FG + 
Sbjct  429  ELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYFMLHFGQLD  488

Query  501  QEDLEMI  507
            +ED ++I
Sbjct  489  HEDENII  495

15) cfcH in NC_013716


> NC_002505_P3|18|G16|15640852|NP_230483.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|22914..24425|-|VC0835|toxin 
co-regulated 
pilus biosynthesis protein T
Length=503

 Score =  306 bits (1148),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 187/404 (47%), Positives = 295/404 (74%), Gaps = 15/404 (3%)

Query  56   GASDLHITRNDVLAVFEARVNGVLKPFMQIKSQQCDEMVFVLYNVEATTRDTTWNRAIPQ  115
            GASD+H+ R+D +  +  RVNG +  + +I S + D ++FVLYNV ATT++TTWNR +PQ
Sbjct  101  GASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQ  160

Query  116  NANILYSLNGKPYRFRYAHFPIFGETADCYHAVLRIIPSGLQKDNL--GSLEKIGISQEE  173
            +ANI+  +N K+YRFRYAH P+FGE +  YHAV+RII      +N+   + + IG ++ +
Sbjct  161  DANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRII---YPSNNFVCTNYQDIGYNEAD  217

Query  174  TEDLKRILSNPYGAYVIAgttgsgksttLKNLMEWLQINRYDDRGCFLTVEDPVEYQIYG  233
            T+ + RIL+ +YG ++++GTTGSGKST+LK+ +E L +N+Y ++GCF+TVEDPVEY I G
Sbjct  218  TDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISG  277

Query  234  AKQSSVVSVDG----GGFHAAIKSALRRDPDVLMVGEIRDNVSANALAGAVESGHYCFTT  289
            A+QSS+V+ ++      F  A++SA+RRDPDV+M+GEIRD+ + +AL++AVESGHYC+TT
Sbjct  278  AQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTT  337

Query  290  VHAGNIVSLLQRMSALGISSDKLSTPGFIAGLQCQKLVPVLCDACKQLYAEKVIAGRTFT  349
            +HAG++VS+LQR+S+LG+ +DK+++PGF+AG+  QKL+P LC +CK  + +       F+
Sbjct  338  IHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFS  397

Query  350  LYQSSEQGCVKCRHSGIRGRQLAMEYFLPTYDELAAISRQEWLNVYTLWREKR---KSVA  406
               ++E+GC  C HSG++GR L +E ++PT ++L  ++ ++W+++Y   RE+R    +  
Sbjct  398  ---ANENGCEACNHSGFKGRLLLLETLVPTVEDLELVASENWVSLYRKYRERRFIKTGKK  454

Query  407  GLAEGFEIREKVMAYVLQGRIDARWFAMEFGVLPVEDLEMIVEK  450
            GL+EGF I++K    VL+G++    F ++FG L  ED ++I E+
Sbjct  455  GLGEGFSIKDKAYYNVLKGKVCHEYFMLHFGQLDHEDENIIYEN  498