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Homologs of HH0250 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0250
( NP_859781.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

0.0

100

2) HCBAA847_1601
( YP_007601462.1 )

VC_A0114 family type VI secretion protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

3e-132

3) HCN_1429
( YP_006235741.1 )

type VI secretion protein VC_A0114 family

NC_017761
(Helicobacter cinaedi PAGU611)

3e-132

4) CCC13826_1178
( YP_001466067.1 )

type VI secretion protein

NC_009802
(Campylobacter concisus 13826)

2e-113

• Sequence Alignments

1) HH0250 in NC_004917


> NC_004917_P1|18|G18|32265749|NP_859781.1|Helicobacter_hepaticus_ATCC_51449|+|17836..19215|-|HH0250|hypothetical 
protein
Length=459

 Score =  708 bits (2677),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 459/459 (100%), Positives = 459/459 (100%), Gaps = 0/459 (0%)

Query  1    MNSKLKVAWYNGMHIDKIHFEQQERFLEHIIHTKTSRLVSNLYGVFDVSFSTDMLNLGKI  60
            MNSKLKVAWYNGMHIDKIHFEQQERFLEHIIHTKTSRLVSNLYGVFDVSFSTDMLNLGKI
Sbjct  1    MNSKLKVAWYNGMHIDKIHFEQQERFLEHIIHTKTSRLVSNLYGVFDVSFSTDMLNLGKI  60

Query  61   ALTQISGITQDGSVFNApdddllpevlelppNMSSPIITLKIPTYSDATADMSLKNTFPN  120
            ALTQISGITQDGSVFNAPDDDLLPEVLELPPNMSSPIITLKIPTYSDATADMSLKNTFPN
Sbjct  61   ALTQISGITQDGSVFNAPDDDLLPEVLELPPNMSSPIITLKIPTYSDATADMSLKNTFPN  120

Query  121  SKYIVSNVPTTSKIHDDVQDYIHTNTEEISYQQEKVSLALGSLRLKLGILGDKSPNELEI  180
            SKYIVSNVPTTSKIHDDVQDYIHTNTEEISYQQEKVSLALGSLRLKLGILGDKSPNELEI
Sbjct  121  SKYIVSNVPTTSKIHDDVQDYIHTNTEEISYQQEKVSLALGSLRLKLGILGDKSPNELEI  180

Query  181  PIAKVKNIYSHSKKIELDEKFIPTSIDICSNAFIKSFLEEMLFSIKQHKESFTQIFRGID  240
            PIAKVKNIYSHSKKIELDEKFIPTSIDICSNAFIKSFLEEMLFSIKQHKESFTQIFRGID
Sbjct  181  PIAKVKNIYSHSKKIELDEKFIPTSIDICSNAFIKSFLEEMLFSIKQHKESFTQIFRGID  240

Query  241  QTKNTLDFSTYLSLNLLKKYTLIFSYLVNKEKLHPETLYEKLVEFQADLLTISHNDAQDE  300
            QTKNTLDFSTYLSLNLLKKYTLIFSYLVNKEKLHPETLYEKLVEFQADLLTISHNDAQDE
Sbjct  241  QTKNTLDFSTYLSLNLLKKYTLIFSYLVNKEKLHPETLYEKLVEFQADLLTISHNDAQDE  300

Query  301  FIPYEHNDLSAVFIPLSNNIRLLFANVTSPKYAMAQVIDNGNGFYDCIFDNASMLQDGEL  360
            FIPYEHNDLSAVFIPLSNNIRLLFANVTSPKYAMAQVIDNGNGFYDCIFDNASMLQDGEL
Sbjct  301  FIPYEHNDLSAVFIPLSNNIRLLFANVTSPKYAMAQVIDNGNGFYDCIFDNASMLQDGEL  360

Query  361  FLAVSSSLPMQTLLETFSTQSKIHTQATIKSIVASQLKGLHIEAIPSIPSALPHLSGYVY  420
            FLAVSSSLPMQTLLETFSTQSKIHTQATIKSIVASQLKGLHIEAIPSIPSALPHLSGYVY
Sbjct  361  FLAVSSSLPMQTLLETFSTQSKIHTQATIKSIVASQLKGLHIEAIPSIPSALPHLSGYVY  420

Query  421  FKLDKQDFIFTHFAKQNVISLYMTNNITKPDIKLWALFN  459
            FKLDKQDFIFTHFAKQNVISLYMTNNITKPDIKLWALFN
Sbjct  421  FKLDKQDFIFTHFAKQNVISLYMTNNITKPDIKLWALFN  459

2) HCBAA847_1601 in NC_020555


> NC_004917_P1|18|G18|32265749|NP_859781.1|Helicobacter_hepaticus_ATCC_51449|+|17836..19215|-|HH0250|hypothetical 
protein
Length=459

 Score =  465 bits (1751),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 263/467 (57%), Positives = 384/467 (83%), Gaps = 10/467 (2%)

Query  1    MANQLKVAWFNGLNIDKIHFEQQERYFQRNIDLKTIEVSNNLYGIIDLKFSNELLIQGKI  60
            M ++LKVAW+NG++IDKIHFEQQER++++ I+ KT  + +NLYG++D+ FS ++L  GKI
Sbjct  1    MNSKLKVAWYNGMHIDKIHFEQQERFLEHIIHTKTSRLVSNLYGVFDVSFSTDMLNLGKI  60

Query  61   ALEKISGIAKDGSIFNAPEQDLLPEALEINYESLENSVIVLKIPLSTASIADVALQNNFP  120
            AL +ISGI++DGS+FNAP++DLLPE LE+   ++ +++I LKIP  + + AD++L+N FP
Sbjct  61   ALTQISGITQDGSVFNAPDDDLLPEVLELP-PNMSSPIITLKIPTYSDATADMSLKNTFP  119

Query  121  NSKYLTLRSIIASRTYDDNHSVGISRELLEDEKDLQNTTFTQEKINLTLASLRLKLGILG  180
            NSKY+      +S+  DD +      + ++ + +  + ++ QEK++L+L+SLRLKLGILG
Sbjct  120  NSKYIVSNVPTTSKIHDDVQ------DYIHTNTE--EISYQQEKVSLALGSLRLKLGILG  171

Query  181  NATPDELEIPIAKIKNI-DSNKKIELEENFIPTCININKVSIVKSFLEETLYSIKQHKEM  239
            + +P+ELEIPIAK+KNI   +KKIEL+E+FIPT I+I   +++KSFLEE L+SIKQHKE 
Sbjct  172  DKSPNELEIPIAKVKNIYSHSKKIELDEKFIPTSIDICSNAFIKSFLEEMLFSIKQHKES  231

Query  240  LWEVFKGIDQTKNTLDFSTYLSLNLLKKWFLIFSYLIHKNKLHPEYLYEKLIEFQGELGA  299
            + ++F+GIDQTKNTLDFSTYLSLNLLKK  LIFSYL++K+KLHPE LYEKL+EFQ++L +
Sbjct  232  FTQIFRGIDQTKNTLDFSTYLSLNLLKKYTLIFSYLVNKEKLHPETLYEKLVEFQADLLT  291

Query  300  FGVENSFLEFIAYQHDNLNETFFPLINNIKILFAKITSPRYSMAKLIDNGNGFYDLLFDN  359
            ++ +++  EFI+Y+H++L+  F+PL NNI++LFA++TSP+Y+MA++IDNGNGFYD +FDN
Sbjct  292  ISHNDAQDEFIPYEHNDLSAVFIPLSNNIRLLFANVTSPKYAMAQVIDNGNGFYDCIFDN  351

Query  360  AGILEESELFLAINADVNHEYLLKNFKTQSKIHTQSKIKNIVATQLRGLNIIQIPNIPSA  419
            A++L+++ELFLA+++ +  + LL  F TQSKIHTQ+ IK+IVA+QL+GL+I  IP+IPSA
Sbjct  352  ASMLQDGELFLAVSSSLPMQTLLETFSTQSKIHTQATIKSIVASQLKGLHIEAIPSIPSA  411

Query  420  IPYLNGYVYYKLDKKDELFKHFKGENAISIYLTHNIKNPDIKMWAVF  466
            +P L+GYVY+KLDK+D +F HF  +N IS+Y+T+NI +PDIK+WA+F
Sbjct  412  LPHLSGYVYFKLDKQDFIFTHFAKQNVISLYMTNNITKPDIKLWALF  458

3) HCN_1429 in NC_017761


> NC_004917_P1|18|G18|32265749|NP_859781.1|Helicobacter_hepaticus_ATCC_51449|+|17836..19215|-|HH0250|hypothetical 
protein
Length=459

 Score =  465 bits (1751),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 263/467 (57%), Positives = 384/467 (83%), Gaps = 10/467 (2%)

Query  1    MANQLKVAWFNGLNIDKIHFEQQERYFQRNIDLKTIEVSNNLYGIIDLKFSNELLIQGKI  60
            M ++LKVAW+NG++IDKIHFEQQER++++ I+ KT  + +NLYG++D+ FS ++L  GKI
Sbjct  1    MNSKLKVAWYNGMHIDKIHFEQQERFLEHIIHTKTSRLVSNLYGVFDVSFSTDMLNLGKI  60

Query  61   ALEKISGIAKDGSIFNAPEQDLLPEALEINYESLENSVIVLKIPLSTASIADVALQNNFP  120
            AL +ISGI++DGS+FNAP++DLLPE LE+   ++ +++I LKIP  + + AD++L+N FP
Sbjct  61   ALTQISGITQDGSVFNAPDDDLLPEVLELP-PNMSSPIITLKIPTYSDATADMSLKNTFP  119

Query  121  NSKYLTLRSIIASRTYDDNHSVGISRELLEDEKDLQNTTFTQEKINLTLASLRLKLGILG  180
            NSKY+      +S+  DD +      + ++ + +  + ++ QEK++L+L+SLRLKLGILG
Sbjct  120  NSKYIVSNVPTTSKIHDDVQ------DYIHTNTE--EISYQQEKVSLALGSLRLKLGILG  171

Query  181  NATPDELEIPIAKIKNI-DSNKKIELEENFIPTCININKVSIVKSFLEETLYSIKQHKEI  239
            + +P+ELEIPIAK+KNI   +KKIEL+E+FIPT I+I   +++KSFLEE L+SIKQHKE 
Sbjct  172  DKSPNELEIPIAKVKNIYSHSKKIELDEKFIPTSIDICSNAFIKSFLEEMLFSIKQHKES  231

Query  240  LWEVFKGIDQTKNTLDFSTYLSLNLLKKWFLIFSYLIHKNKLHPEYLYEKLIEFQGELGA  299
            + ++F+GIDQTKNTLDFSTYLSLNLLKK  LIFSYL++K+KLHPE LYEKL+EFQ++L +
Sbjct  232  FTQIFRGIDQTKNTLDFSTYLSLNLLKKYTLIFSYLVNKEKLHPETLYEKLVEFQADLLT  291

Query  300  FGVENSFLEFIAYQHDNLNETFFPLINNIKILFAKITSPRYSMAKLIDNGNGFYDLLFDN  359
            ++ +++  EFI+Y+H++L+  F+PL NNI++LFA++TSP+Y+MA++IDNGNGFYD +FDN
Sbjct  292  ISHNDAQDEFIPYEHNDLSAVFIPLSNNIRLLFANVTSPKYAMAQVIDNGNGFYDCIFDN  351

Query  360  AGILEESELFLAINADVNHEYLLKNFKTQSKIHTQSKIKNIVATQLRGLNIIQIPNIPSA  419
            A++L+++ELFLA+++ +  + LL  F TQSKIHTQ+ IK+IVA+QL+GL+I  IP+IPSA
Sbjct  352  ASMLQDGELFLAVSSSLPMQTLLETFSTQSKIHTQATIKSIVASQLKGLHIEAIPSIPSA  411

Query  420  IPYLNGYVYYKLDKKDELFKHFKGENAISIYLTHNIKNPDIKMWAVF  466
            +P L+GYVY+KLDK+D +F HF  +N IS+Y+T+NI +PDIK+WA+F
Sbjct  412  LPHLSGYVYFKLDKQDFIFTHFAKQNVISLYMTNNITKPDIKLWALF  458

4) CCC13826_1178 in NC_009802


> NC_004917_P1|18|G18|32265749|NP_859781.1|Helicobacter_hepaticus_ATCC_51449|+|17836..19215|-|HH0250|hypothetical 
protein
Length=459

 Score =  402 bits (1513),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 228/453 (51%), Positives = 356/453 (79%), Gaps = 10/453 (2%)

Query  1    MNVDKVHFEQQERYFERNLNLKTVSSFSNLYGVleleisselllQGKIGLNKISCISQDG  60
            M++DK+HFEQQER++E+ ++ KT    SNLYGV+++ +S+++L  GKI+L +IS I+QDG
Sbjct  13   MHIDKIHFEQQERFLEHIIHTKTSRLVSNLYGVFDVSFSTDMLNLGKIALTQISGITQDG  72

Query  61   TIYNAPDQDDLPEPLEISPSELNSAVIVLKLPV-SSGLVDVSLQNNLPNLKFTAKQALIS  119
            +++NAPD+D LPE LE++P +++S++I LK+P  S +  D+SL+N +PN K+   +   +
Sbjct  73   SVFNAPDDDLLPEVLELPP-NMSSPIITLKIPTYSDATADMSLKNTFPNSKYIVSNVPTT  131

Query  120  SRVHDEASNDILNELDDKYDFELSSAFTQDKENLILASQRSTLGVLGSKTPYELSVPVCR  179
            S++HD+  + I  + ++        ++ Q+K +L L+S R  LG+LG K+P EL +P+ +
Sbjct  132  SKIHDDVQDYIHTNTEE-------ISYQQEKVSLALGSLRLKLGILGDKSPNELEIPIAK  184

Query  180  IKNI-DLNKQITLDEKFIPTCIDVSKNSFITSFIDEFSFATKQHQESYTGLLGGIDQAKN  238
            +KNI   +K+I LDEKFIPT ID+  N+FI SF++E  F+ KQH+ES+T ++ GIDQ+KN
Sbjct  185  VKNIYSHSKKIELDEKFIPTSIDICSNAFIKSFLEEMLFSIKQHKESFTQIFRGIDQTKN  244

Query  239  RLDISTYLTLNMLKKWHLIFSYLFKRDKIHPEYLYEKLIDFQADLLALSHDDSFSEFIAY  298
             LD+STYL+LN+LKK  LIFSYL +++K+HPE LYEKL++FQADLL++SH+D+  EFI+Y
Sbjct  245  TLDFSTYLSLNLLKKYTLIFSYLVNKEKLHPETLYEKLVEFQADLLTISHNDAQDEFIPY  304

Query  299  DHNNLSQTFVPLINNLRLLFSHILSPKYVMAQIVKNNHGFFDCVFDNPSIIENSEIYFAI  358
            +HN+LS  F+PL NN+RLLF+++ SPKY MAQ++ N +GF+DC+FDN+S+++++E+++A+
Sbjct  305  EHNDLSAVFIPLSNNIRLLFANVTSPKYAMAQVIDNGNGFYDCIFDNASMLQDGELFLAV  364

Query  359  HSDTKNEYLLKNFKEQCKIHTQSNIKSIVSSQLRGINVEQISAIPSTLPKLNDYIYYKID  418
             S    + LL  F  Q KIHTQ+ IKSIV+SQL+G+++E I++IPS+LP L++Y+Y+K+D
Sbjct  365  SSSLPMQTLLETFSTQSKIHTQATIKSIVASQLKGLHIEAIPSIPSALPHLSGYVYFKLD  424

Query  419  KKDEIFKSFANQSVISVYITANLSNADIKMWAL  451
            K+D IF  FA+Q+VIS+Y+T N++++DIK+WAL
Sbjct  425  KQDFIFTHFAKQNVISLYMTNNITKPDIKLWAL  457