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Homologs of YPO0271 gene of NC_003143_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) fliQ1
( NP_991820.1 )

type III secretion apparatus protein

NC_005810
(Yersinia pestis 91001)

6e-23

100

2) A1122_03780
( YP_005520451.1 )

putative type III secretion apparatus protein

NC_017168
(Yersinia pestis A1122)

6e-23

100

3) YPA_4011
( YP_653917.1 )

putative type III secretion apparatus protein

NC_008150
(Yersinia pestis Antiqua)

6e-23

100

4) YPO0271
( YP_002345353.1 )

type III secretion apparatus protein

NC_003143
(Yersinia pestis CO92)

6e-23

100

5) YPN_3396
( YP_649323.1 )

type III secretion apparatus protein

NC_008149
(Yersinia pestis Nepal516)

6e-23

100

6) YPDSF_3699
( YP_001165022.1 )

type III secretion apparatus protein

NC_009381
(Yersinia pestis Pestoides F)

6e-23

100

7) YPTB0328
( YP_068874.1 )

type III secretion apparatus protein EscS/SsaS/YscS

NC_006155
(Yersinia pseudotuberculosis IP 32953)

6e-23

100

8) YPTS_0352
( YP_001870798.1 )

HrpO family type III secretion protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

6e-23

100

9) YPK_3901
( YP_001722619.1 )

HrpO family type III secretion protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

6e-23

100

10) YpAngola_A3928
( YP_001608227.1 )

HrpO family type III secretion protein

NC_010159
(Yersinia pestis Angola)

4e-21

100

11) y0531
( NP_667868.1 )

type III secretion system component

NC_004088
(Yersinia pestis KIM)

4e-21

100

12) YpsIP31758_3813
( YP_001402767.1 )

HrpO family type III secretion protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

4e-21

100

13) YE105_C0339
( YP_004296540.1 )

type III secretion system protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-17

14) Y11_35461
( YP_006007045.1 )

type III secretion inner membrane protein

NC_017564
(Yersinia enterocolitica Y11)

1e-17

15) SG1306
( YP_454986.1 )

type III secretion apparatus

NC_007712
(Sodalis glossinidius morsitans)

3e-14

16) fliQ
( NP_623043.1 )

flagellar biosynthesis protein FliQ

NC_003869
(Thermoanaerobacter tengcongensis MB4)

5e-07

17) Desca_1785
( YP_004497544.1 )

flagellar biosynthetic protein FliQ

NC_015565
(Desulfotomaculum carboxydivorans CO-1-SRB)

6e-06

18) Desru_1251
( YP_004544811.1 )

flagellar biosynthetic protein FliQ

NC_015589
(Desulfotomaculum ruminis DSM 2154)

3e-05

19) Dred_2395
( YP_001113730.1 )

flagellar biosynthetic protein FliQ

NC_009253
(Desulfotomaculum reducens MI-1)

2e-04

20) PM3016_5145
( YP_005315014.1 )

protein FliQ

NC_016935
(Paenibacillus mucilaginosus 3016)

4e-04

21) B2K_26630
( YP_006191987.1 )

flagellar biosynthesis protein FliQ

NC_017672
(Paenibacillus mucilaginosus K02)

4e-04

22) fliQ
( YP_004644197.1 )

protein FliQ

NC_015690
(Paenibacillus mucilaginosus KNP414)

4e-04

• Sequence Alignments

1) A1122_03780 in NC_017168


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

2) YPA_4011 in NC_008150


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

3) fliQ1 in NC_005810


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

4) YPO0271 in NC_003143


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

5) YPN_3396 in NC_008149


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

6) YPDSF_3699 in NC_009381


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

7) YPTB0328 in NC_006155


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

8) YPTS_0352 in NC_010634


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

9) YPK_3901 in NC_010465


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MNNHMSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFL  60
           MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL
Sbjct  1   MNNHMSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFL  60

Query  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97
           IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  61  IKLLAVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

10) YpAngola_A3928 in NC_010159


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 94.7 bits (340),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)

Query  1   MSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFLIKLL  60
           MSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLL
Sbjct  5   MSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLL  64

Query  61  AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  93
           AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  65  AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

11) y0531 in NC_004088


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 94.7 bits (340),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)

Query  1   MSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFLIKLL  60
           MSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLL
Sbjct  5   MSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLL  64

Query  61  AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  93
           AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  65  AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

12) YpsIP31758_3813 in NC_009708


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 94.7 bits (340),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)

Query  1   MSSYHENAIIvhlatellwlvlllslpvvvvastvglvISLVQALTQIQDQTLQFLIKLL  60
           MSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLL
Sbjct  5   MSSYHENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLL  64

Query  61  AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  93
           AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP
Sbjct  65  AVSATLLMTYHWMGATLLNYTQQSFLQITSMRP  97

13) YE105_C0339 in NC_015224


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 82.8 bits (295),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 75/88 (86%), Positives = 86/88 (98%), Gaps = 0/88 (0%)

Query  2   SNAIVVHLATQLLWIvlllsmpvvvvasvvgivvsllQALTQIQDQTLQFLIKLLAVSAT  61
            NAI+VHLAT+LLW+VLLLS+PVVVVAS VG+V+SL+QALTQIQDQTLQFLIKLLAVSAT
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LLITYHWMGSTLLNYTQQTFLQITSMRS  89
           LL+TYHWMG+TLLNYTQQ+FLQITSMR+
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMRP  97

14) Y11_35461 in NC_017564


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 82.8 bits (295),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 75/88 (86%), Positives = 86/88 (98%), Gaps = 0/88 (0%)

Query  2   SNAIVVHLATQLLWIvlllsmpvvvvasvvgivvsllQALTQIQDQTLQFLIKLLAVSAT  61
            NAI+VHLAT+LLW+VLLLS+PVVVVAS VG+V+SL+QALTQIQDQTLQFLIKLLAVSAT
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LLITYHWMGSTLLNYTQQTFLQITSMRS  89
           LL+TYHWMG+TLLNYTQQ+FLQITSMR+
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMRP  97

15) SG1306 in NC_007712


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 72.1 bits (254),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 54/87 (63%), Positives = 75/87 (87%), Gaps = 1/87 (1%)

Query  2   NDAALTHLVTQLMWIVLITSLPVVLVASAVGILVSLFQALTQIQDQTLQFMIKLLAVAIT  61
           ++A + HL T+L+W+VL+ SLPVV+VAS+VG+++SL QALTQIQDQTLQF+IKLLAV+ T
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LMASYPWLGGILLGYTRQVLLQI-GMR  87
           L+ +Y W+G+ LL YT+Q +LQI +MR
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMR  96

16) M892_04540 in NC_022269


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 42/87 (49%), Positives = 69/87 (80%), Gaps = 0/87 (0%)

Query  2   NPAEIIHFTTQALTLVLFLSLPPILVAALVGTLVSLVQALTQVQEQTLGFVVKLIAVIIT  61
           + A I+H++T+ L LVL+LSLP ++VA+ VG ++SLVQALTQ+Q+QTL F++KL+AV  T
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LFVTTQWLGAELHSFATLTLGKIPQIR  88
           L++T +W+GA L +++  ++ +I  +R
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMR  96

17) VIBHAR_01725 in NC_009783


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 42/87 (49%), Positives = 69/87 (80%), Gaps = 0/87 (0%)

Query  2   NPAEIIHFTTQALTLVLFLSLPPILVAALVGTLVSLVQALTQVQEQTLGFVVKLIAVIIT  61
           + A I+H++T+ L LVL+LSLP ++VA+ VG ++SLVQALTQ+Q+QTL F++KL+AV  T
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LFVTTQWLGAELHSFATLTLGKIPQIR  88
           L++T +W+GA L +++  ++ +I  +R
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMR  96

18) VPBB_1533 in NC_019955


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 41/87 (48%), Positives = 68/87 (79%), Gaps = 0/87 (0%)

Query  2   NPAEIIHFTTQALTLVLFLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIIT  61
           + A I+H++T+ L LVL+LSLP ++VA+ VG ++SL+QALTQ+Q+QTL F++KL+AV  T
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LFITTQWLGAELHAFASLALDKIPQIR  88
           L++T +W+GA L  ++  ++ +I  +R
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMR  96

19) M636_13700 in NC_021848


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 41/87 (48%), Positives = 68/87 (79%), Gaps = 0/87 (0%)

Query  2   NPAEIIHFTTQALTLVLFLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIIT  61
           + A I+H++T+ L LVL+LSLP ++VA+ VG ++SL+QALTQ+Q+QTL F++KL+AV  T
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LFITTQWLGAELHAFASLALDKIPQIR  88
           L++T +W+GA L  ++  ++ +I  +R
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMR  96

20) M634_09100 in NC_021847


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 41/87 (48%), Positives = 68/87 (79%), Gaps = 0/87 (0%)

Query  2   NPAEIIHFTTQALTLVLFLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIIT  61
           + A I+H++T+ L LVL+LSLP ++VA+ VG ++SL+QALTQ+Q+QTL F++KL+AV  T
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LFITTQWLGAELHAFASLALDKIPQIR  88
           L++T +W+GA L  ++  ++ +I  +R
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMR  96

21) VP1673 in NC_004603


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 41/87 (48%), Positives = 68/87 (79%), Gaps = 0/87 (0%)

Query  2   NPAEIIHFTTQALTLVLFLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIIT  61
           + A I+H++T+ L LVL+LSLP ++VA+ VG ++SL+QALTQ+Q+QTL F++KL+AV  T
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LFITTQWLGAELHAFASLALDKIPQIR  88
           L++T +W+GA L  ++  ++ +I  +R
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITSMR  96

22) fliQ in NC_003869


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 38/85 (45%), Positives = 62/85 (73%), Gaps = 0/85 (0%)

Query  2   SSSMAVDLGREALSVALTVATPMLAVALGVGLLISIFQATTQIQEQTLSFVPKIVAVLLS  61
            +++ V+L+ E L + L ++ P++ VA  VGL+IS+ QA TQIQ+QTL F+ K++AV  +
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  LILFGPWMLTTLVNYTQRLFLNINN  86
           L++   WM +TL+NYTQ+ FL+I +
Sbjct  70  LLMTYHWMGATLLNYTQQSFLQITS  94

23) Desca_1785 in NC_015565


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 44.2 bits (148),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 37/85 (44%), Positives = 63/85 (75%), Gaps = 0/85 (0%)

Query  3   ETFVIHVAREALMMVVILSLPALGVAMLVGLIISILQATTQIQEQTLSFVPKMVAVFVTL  62
           +++++H+A E L +V++LSLP + VA  VGL+IS++QA TQIQ+QTL F+ K++AV  TL
Sbjct  11  NAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSATL  70

Query  63  LIAASWLLNIAVNFTTRLYQQIPNI  87
           L++  W+    +N+T + + QI ++
Sbjct  71  LMTYHWMGATLLNYTQQSFLQITSM  95

24) Desru_1251 in NC_015589


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 38/82 (47%), Positives = 60/82 (74%), Gaps = 0/82 (0%)

Query  6   VLHLAREALMLVVILSLPALGVAMLVGLIISILQATTQIQEQTLTFVPKMVAVFVTLIIA  65
           ++HLA E L LV++LSLP + VA  VGL+IS++QA TQIQ+QTL F+ K++AV  TL+++
Sbjct  14  IVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSATLLMT  73

Query  66  ASWLLNIAVNFTTRLYEQIPNL  87
             W+    +N+T + + QI ++
Sbjct  74  YHWMGATLLNYTQQSFLQITSM  95

25) Dred_2395 in NC_009253


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 39.3 bits (129),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 34/82 (42%), Positives = 58/82 (71%), Gaps = 0/82 (0%)

Query  6   VLHLAREALMMVVILSIPTLGVAMLVGLIIGIFQATTQIQEQTLSFVPKMVAVFLTLIVA  65
           ++HLA E L +V++LS+P + VA  VGL+I++ QA TQIQ+QTL F+ K++AV  TL+++
Sbjct  14  IVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSATLLMT  73

Query  66  AGWLLNIAIRFTTRLYEQIPNL  87
             W+    + +T + + QI ++
Sbjct  74  YHWMGATLLNYTQQSFLQITSM  95

26) PM3016_5145 in NC_016935


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 38.2 bits (125),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 31/76 (41%), Positives = 54/76 (72%), Gaps = 0/76 (0%)

Query  2   SSEFVIRLAGEAVYITLKASAPMLVLALVVGLVISVFQATTQIQEQTLAFVPKIVIVLLA  61
            + ++++LA E + + L  S P++V+A  VGLVIS+ QA TQIQ+QTL F+ K++ V  +
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  MLVFGPWIMTTLVDFT  77
           +L+   W+ +TL+++T
Sbjct  70  LLMTYHWMGATLLNYT  85

27) B2K_26630 in NC_017672


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 38.2 bits (125),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 31/76 (41%), Positives = 54/76 (72%), Gaps = 0/76 (0%)

Query  2   SSEFVIRLAGEAVYITLKASAPMLVLALVVGLVISVFQATTQIQEQTLAFVPKIVIVLLA  61
            + ++++LA E + + L  S P++V+A  VGLVIS+ QA TQIQ+QTL F+ K++ V  +
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  MLVFGPWIMTTLVDFT  77
           +L+   W+ +TL+++T
Sbjct  70  LLMTYHWMGATLLNYT  85

28) fliQ in NC_015690


> NC_003143_P1|19|G19|218927478|YP_002345353.1|Yersinia_pestis_CO92|+|16273..16566|-|YPO0271|type 
III secretion apparatus protein
Length=97

 Score = 38.2 bits (125),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 31/76 (41%), Positives = 54/76 (72%), Gaps = 0/76 (0%)

Query  2   SSEFVIRLAGEAVYITLKASAPMLVLALVVGLVISVFQATTQIQEQTLAFVPKIVIVLLA  61
            + ++++LA E + + L  S P++V+A  VGLVIS+ QA TQIQ+QTL F+ K++ V  +
Sbjct  10  ENAIIVHLATELLWLVLLLSLPVVVVASTVGLVISLVQALTQIQDQTLQFLIKLLAVSAT  69

Query  62  MLVFGPWIMTTLVDFT  77
           +L+   W+ +TL+++T
Sbjct  70  LLMTYHWMGATLLNYT  85