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Homologs of fooX gene of AY560912

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) sfaX
( YP_006105302.1 )

HTH-type transcriptional regulator SfaX

NC_017631
(Escherichia coli ABU 83972)

2e-75

100

2) ECOK1_1106
( YP_006100314.1 )

MarR family transcriptional regulator

NC_017628
(Escherichia coli IHE3034)

1e-74

3) marR_2
( YP_008570963.1 )

Multiple antibiotic resistance protein marR

NC_022370
(Escherichia coli PMV-1)

1e-74

4) focX
( NP_753161.1 )

regulatory protein

NC_004431
(Escherichia coli CFT073)

6e-74

100

5) focX
( YP_006153267.1 )

putative regulatory protein

NC_017652
(Escherichia coli clone D i14)

6e-74

100

6) focX
( YP_006148348.1 )

putative regulatory protein

NC_017651
(Escherichia coli clone D i2)

6e-74

100

7) papX
( YP_006108754.1 )

HTH-type transcriptional regulator

NC_017631
(Escherichia coli ABU 83972)

7e-74

8) ECP_0301
( YP_668235.1 )

MarR family transcriptional regulator

NC_008253
(Escherichia coli 536)

3e-73

9) focX
( YP_540132.1 )

regulatory protein

NC_007946
(Escherichia coli UTI89)

3e-73

10) ECP_4531
( YP_672368.1 )

PapX protein

NC_008253
(Escherichia coli 536)

2e-72

11) papX
( NP_755457.1 )

PapX protein

NC_004431
(Escherichia coli CFT073)

2e-72

12) ECUMN_3330
( YP_002414008.1 )

putative HTH-type transcriptional regulator

NC_011751
(Escherichia coli UMN026)

2e-72

13) ECP_3776
( YP_671648.1 )

MarR family transcriptional regulator

NC_008253
(Escherichia coli 536)

3e-72

14) ECABU_c32610
( YP_006107260.1 )

MarR family transcriptional regulator

NC_017631
(Escherichia coli ABU 83972)

5e-72

15) papX
( YP_543820.1 )

regulator PapX protein

NC_007946
(Escherichia coli UTI89)

4e-71

16) papX
( YP_859801.1 )

regulator PapX protein

NC_008563
(Escherichia coli APEC O1)

6e-71

17) papX
( YP_006145434.1 )

HTH-type transcriptional regulator

NC_017646
(Escherichia coli CE10)

6e-71

18) ECIAI39_3395
( YP_002409314.1 )

putative HTH-type transcriptional regulator

NC_011750
(Escherichia coli IAI39)

6e-71

19) ECS88_4713
( YP_002394203.1 )

HTH-type transcriptional regulator

NC_011742
(Escherichia coli S88)

6e-71

20) papX
( YP_006155363.1 )

PapX protein

NC_017652
(Escherichia coli clone D i14)

1e-70

21) papX
( YP_006150444.1 )

PapX protein

NC_017651
(Escherichia coli clone D i2)

1e-70

22) UM146_21640
( YP_006113168.1 )

Putative HTH-type transcriptional regulator

NC_017632
(Escherichia coli UM146)

4e-59

23) UMNK88_pEnt18
( YP_006131751.1 )

putative transcriptional regulator

NC_017640
(Escherichia coli UMNK88)

2e-36

24) ECOK1_0269
( YP_006099514.1 )

MarR family transcriptional regulator

NC_017628
(Escherichia coli IHE3034)

5e-27

25) NRG857_01330
( YP_006118630.1 )

hypothetical protein

NC_017634
(Escherichia coli NRG 857C)

5e-27

26) UM146_15935
( YP_006112058.1 )

hypothetical protein

NC_017632
(Escherichia coli UM146)

5e-27

27) ECP_0344
( YP_668277.1 )

MarR family transcriptional regulator

NC_008253
(Escherichia coli 536)

6e-27

28) ECABU_c03660
( YP_006104501.1 )

MarR family transcriptional regulator

NC_017631
(Escherichia coli ABU 83972)

6e-27

29) APECO1_1713
( YP_851471.1 )

hypothetical protein

NC_008563
(Escherichia coli APEC O1)

6e-27

30) c0392
( NP_752329.1 )

hypothetical protein

NC_004431
(Escherichia coli CFT073)

6e-27

31) i14_0371
( YP_006152509.1 )

hypothetical protein

NC_017652
(Escherichia coli clone D i14)

6e-27

32) i02_0371
( YP_006147590.1 )

hypothetical protein

NC_017651
(Escherichia coli clone D i2)

6e-27

33) LF82_042
( YP_002555227.1 )

hypothetical protein

NC_011993
(Escherichia coli LF82)

6e-27

34) marR_1
( YP_008570212.1 )

Multiple antibiotic resistance protein marR

NC_022370
(Escherichia coli PMV-1)

6e-27

35) UTI89_C0297
( YP_539329.1 )

hypothetical protein

NC_007946
(Escherichia coli UTI89)

6e-27

36) emrR
( YP_003931984.1 )

transcriptional repressor of emrAB operon

NC_014562
(Pantoea vagans C9-1)

2e-22

• Sequence Alignments

1) sfaX in NC_017631


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  274 bits (1025),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)

Query  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60
            MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120
            TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166
            MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

2) ECOK1_1106 in NC_017628


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  272 bits (1016),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 164/166 (99%), Positives = 165/166 (99%), Gaps = 0/166 (0%)

Query  1    MNNTDTLEKIIRHQKNKDPVYPFREHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60
            MNNTDTLEKIIRHQKNKDP YPF+EHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120
            TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166
            MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

3) marR_2 in NC_022370


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  272 bits (1016),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 164/166 (99%), Positives = 165/166 (99%), Gaps = 0/166 (0%)

Query  1    MNNTDTLEKIIRHQKNKDPVYPFREHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60
            MNNTDTLEKIIRHQKNKDP YPF+EHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120
            TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166
            MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

4) focX in NC_004431


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  269 bits (1007),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  140
            FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  183
            IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

5) focX in NC_017652


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  269 bits (1007),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  140
            FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  183
            IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

6) focX in NC_017651


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  269 bits (1007),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  140
            FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  183
            IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

7) papX in NC_017631


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  269 bits (1005),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 160/166 (97%), Positives = 164/166 (99%), Gaps = 0/166 (0%)

Query  1    MNNTDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSVYMVL  60
            MNNTDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLG YGINHSVYMVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   TTLFAAESHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRMDSREDRRAKKISLTSEG  120
            TTLF+AESHCLSPSEISQKLQFTRTNITRITDFLEK+GYVKR DSREDRRAKKISLTSEG
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166
            MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

8) ECP_0301 in NC_008253


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  267 bits (998),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 161/163 (99%), Positives = 162/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  140
            FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLEHLDDVSS  183
            IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLL HLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

9) focX in NC_007946


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  267 bits (998),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 161/163 (99%), Positives = 162/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPVYPFREHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  80
            TDTLEKIIRHQKNKDP YPF+EHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  140
            FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  183
            IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

10) ECP_4531 in NC_008253


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  264 bits (988),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 157/163 (97%), Positives = 161/163 (99%), Gaps = 0/163 (0%)

Query  22   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSVYMVLTTL  81
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLG YGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  82   FAAESHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRMDSREDRRAKKISLTSEGMFF  141
            F+AESHCLSPSEISQKLQFTRTNITRITDFLEK+GYVKR DSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  142  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  184
            IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

11) papX in NC_004431


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  264 bits (988),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 157/163 (97%), Positives = 161/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSVYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLG YGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAESHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRMDSREDRRAKKISLTSEGMFF  140
            F+AESHCLSPSEISQKLQFTRTNITRITDFLEK+GYVKR DSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  183
            IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

12) ECUMN_3330 in NC_011751


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  264 bits (988),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 157/163 (97%), Positives = 161/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSVYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLG YGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAESHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRMDSREDRRAKKISLTSEGMFF  140
            F+AESHCLSPSEISQKLQFTRTNITRITDFLEK+GYVKR DSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  183
            IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

13) ECP_3776 in NC_008253


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  263 bits (984),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 155/163 (96%), Positives = 161/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSVYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLG YGINHSVYMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAESHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRMDSREDRRAKKISLTSEGMFF  140
            F+AESHCLSPSEISQKLQFTRTNITRITDFLEK+GYVKR DSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWGYLAHDEQELFEIINKKLLAHLDDVSS  183
            IQRLTLAQSMYLKEIWGYL+HDEQELFE+INKKLLAHLDDVSS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

14) ECABU_c32610 in NC_017631


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  263 bits (982),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 155/166 (94%), Positives = 162/166 (98%), Gaps = 0/166 (0%)

Query  1    MNNTDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSAYMVL  60
            MNNTDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLG YGINHS YMVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   TTLFAAENHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEG  120
            TTLF+AE+HCLSPSEISQKLQFTRTNITRITDFLEK+GYVKRTDSREDRRAKKISLTSEG
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  MFFIQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS  166
            MFFIQRLTLAQSMYLKEIW+YLTHDEQELFEVINKKLLAH+ D SS
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

15) papX in NC_007946


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  260 bits (970),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 154/163 (95%), Positives = 160/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGAYGINHSAYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLGAYGINHS YMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAESHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFF  140
            F+AESHCLSPSEISQKLQFTRTNITRITDFLEK+GYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS  183
            IQRLTLAQSMYLKEIW+YLTHDEQELFEVINKKLLAH+ D SS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

16) papX in NC_008563


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  259 bits (968),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 153/163 (94%), Positives = 160/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGAYGINHSAYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLGAYGINHS YMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAENHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFF  140
            F+AE+HCLSPSEISQKLQFTRTNITRITDFLEK+GYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS  183
            IQRLTLAQSMYLKEIW+YLTHDEQELFEVINKKLLAH+ D SS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

17) ECIAI39_3395 in NC_011750


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  259 bits (968),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 153/163 (94%), Positives = 160/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGAYGINHSAYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLGAYGINHS YMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAENHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFF  140
            F+AE+HCLSPSEISQKLQFTRTNITRITDFLEK+GYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS  183
            IQRLTLAQSMYLKEIW+YLTHDEQELFEVINKKLLAH+ D SS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

18) papX in NC_017646


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  259 bits (968),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 153/163 (94%), Positives = 160/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGAYGINHSAYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLGAYGINHS YMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAENHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFF  140
            F+AE+HCLSPSEISQKLQFTRTNITRITDFLEK+GYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS  183
            IQRLTLAQSMYLKEIW+YLTHDEQELFEVINKKLLAH+ D SS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

19) ECS88_4713 in NC_011742


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  259 bits (968),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 153/163 (94%), Positives = 160/163 (99%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGAYGINHSAYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLGAYGINHS YMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAENHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFF  140
            F+AE+HCLSPSEISQKLQFTRTNITRITDFLEK+GYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS  183
            IQRLTLAQSMYLKEIW+YLTHDEQELFEVINKKLLAH+ D SS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

20) papX in NC_017652


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  258 bits (965),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 152/163 (94%), Positives = 159/163 (98%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSAYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLG YGINHS YMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAENHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFF  140
            F+AE+HCLSPSEISQKLQFTRTNITRITDFLEK+GYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS  183
            IQRLTLAQSMYLKEIW+YLTHDEQELFEVINKKLLAH+ D SS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

21) papX in NC_017651


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  258 bits (965),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 152/163 (94%), Positives = 159/163 (98%), Gaps = 0/163 (0%)

Query  21   TDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSAYMVLTTL  80
            TDTLEKIIRHQKNKDPAYPF+EHLLMQLCIR+NKRMQDNISEFLG YGINHS YMVLTTL
Sbjct  4    TDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTL  63

Query  81   FAAENHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFF  140
            F+AE+HCLSPSEISQKLQFTRTNITRITDFLEK+GYVKRTDSREDRRAKKISLTSEGMFF
Sbjct  64   FTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFF  123

Query  141  IQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS  183
            IQRLTLAQSMYLKEIW+YLTHDEQELFEVINKKLLAH+ D SS
Sbjct  124  IQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS  166

22) UM146_21640 in NC_017632


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  220 bits (818),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 130/138 (95%), Positives = 135/138 (98%), Gaps = 0/138 (0%)

Query  1    MQLCIRTNKRMQDNISEFLGAYGINHSAYMVLTTLFAAESHCLSPSEISQKLQFTRTNIT  60
            MQLCIR+NKRMQDNISEFLGAYGINHS YMVLTTLF+AESHCLSPSEISQKLQFTRTNIT
Sbjct  29   MQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTLFTAESHCLSPSEISQKLQFTRTNIT  88

Query  61   RITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWDYLTHDEQE  120
            RITDFLEK+GYVKRTDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIW+YLTHDEQE
Sbjct  89   RITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWGYLTHDEQE  148

Query  121  LFEVINKKLLAHFSDASS  138
            LFEVINKKLLAH+ D SS
Sbjct  149  LFEVINKKLLAHLDDVSS  166

23) UMNK88_pEnt18 in NC_017640


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  145 bits (532),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 74/159 (47%), Positives = 124/159 (78%), Gaps = 0/159 (0%)

Query  1    MDSMKLLNKTIIYQQQNEQSYPSQEHLLLQLCMRVNKKLSDNINAYLKNYDINDTTLMIL  60
            M++   L+K I  Q++++ +YP QEHLL+QLC+R NK++ DNI+ +L  Y+IN++  M+L
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   TLLSSVDGFCLSPTELSERLDVSKTNITRACDSLEKIGFIKRMASKEDRRSKNIYLTPEG  120
            T L + ++ CLSP+E+S++L+ ++TNITR  D LEK G++KR  S+EDRR+K+I LT+EG
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  DLYLHQTTRIYGIYLKEIWSCLADDEINLLKVISRKVLS  159
             +++++ T   ++YLKEIW+ L++DE +L+ VI++K+L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLA  159

24) ECOK1_0269 in NC_017628


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (413),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  1    MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  60
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  120
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  162
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

25) NRG857_01330 in NC_017634


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (413),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  1    MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  60
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  120
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  162
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

26) UM146_15935 in NC_017632


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (413),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  1    MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  60
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  61   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  120
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  121  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  162
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

27) ECP_0344 in NC_008253


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

28) ECABU_c03660 in NC_017631


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

29) APECO1_1713 in NC_008563


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

30) c0392 in NC_004431


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

31) i14_0371 in NC_017652


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

32) i02_0371 in NC_017651


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

33) LF82_042 in NC_011993


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

34) marR_1 in NC_022370


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

35) UTI89_C0297 in NC_007946


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 76/162 (47%), Positives = 114/162 (71%), Gaps = 0/162 (0%)

Query  11   MNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVL  70
            MNN D L  I   +K K+PAYP QE LL++L IR N ++Q  I + L+ Y IN S +MVL
Sbjct  1    MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVL  60

Query  71   VSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEkkniakrinnkndrrSKSICLTPDG  130
             +L+ ++  C SPS+I + LQF++TNIT+I D LEK    KR ++++DRR+K I LT++G
Sbjct  61   TTLFTAESHCLSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEG  120

Query  131  VTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLN  172
            + + Q+L  +Q++ LK IW+ L++DE   FE+ NKKLL++L+
Sbjct  121  MFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLD  162

36) emrR in NC_014562


> AY560912|2|G2|49035998|AAT48696.1|Escherichia_coli_4787|+|1512..2012|fooX|-|putative 
regulatory protein
Length=166

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 63/155 (41%), Positives = 103/155 (67%), Gaps = 2/155 (1%)

Query  14   IRANRHKD--FPLQEIILTRLCMHMQGKLLDNRNKMLKAQGINETLFMALITLDAQENHS  71
            IR +++KD  +P+QE +L +LC++ + ++ DN +  L A GIN++++M L TL + E+H 
Sbjct  11   IRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTLFTAESHC  70

Query  72   IQPSELSSALGSSRTNATRIADELEKRGWIERRESDHDRRCLHLHLTDKGMEFLRQLLPP  131
            + PSE+S  L  +RTN TRI+D LEK G + R +S +DRR   + LT  GM F+++L  +
Sbjct  71   LSPSEISQKLQFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFFIQRLTLA  130

Query  132  QHQSLQYLWSSLSVDEKSQLEGITRKLLNRLDKMD  166
            Q   L+ +W+ L+ DE+  +E I +KLL +LD + 
Sbjct  131  QSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVS  165