Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of yhhI gene of NC_008563_P1

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) unnamed
( - )

NC_017626
(Escherichia coli 042)

e-174

92.6

2) yhhI
( - )

NC_011751
(Escherichia coli UMN026)

e-174

92.6

• Sequence Alignments

1) unnamed in NC_017626


>NC_008563_P1|23|G22|117622520|YP_851433.1|Escherichia_coli_APEC_O1|+|27950..28435|yhhI|APECO1_1751|transposase 
          Length = 486

 Score = 608 bits (1570), Expect = e-174
 Identities = 340/374 (91%)
 Strand = Plus / Plus

Query: 17  aaatccatcttcatattgtttgcgatgtccctgatgaacttattgatttcacgtttgaat 76
           |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aaatccgtcttcatattatttgcgatgtccctgatgaacttattgatttcacgtttgaat 169

Query: 77  ggaaaggtcagaagaaattatgcgtggcagtctccttttggtcaataatagcagaacaaa 136
           ||||||  | ||||||||||||| |||||||||||||| | ||||||||| |||||||||
Sbjct: 170 ggaaagagctgaagaaattatgcatggcagtctcctttcgttcaataataacagaacaaa 229

Query: 137 agaaagagccagaaatgacggtcagatattatatcagttctgctgatttaaccgcaaaaa 196
           ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| | |
Sbjct: 230 agaaagagccagaaatgacggacagatattatagcatttctgctgatttaaccgcagaga 289

Query: 197 agttcgccacagcgatacgaaatcactggcacgtggagaataagctgcactggcgtctgg 256
           |||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 290 agttcgccacagcgaaccgaaatcactggtacgtggagaataagctgcactggcatctgg 349

Query: 257 acgtggtaatgaacgaagacgactgcaaaataagaagaggaaacgccgcagaattatttt 316
           |||||||||||||  |||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 350 acgtggtaatgaataaagacgactgcaaaataagaagaggaaatgcagcagaattatttt 409

Query: 317 cagggatacggcacatcgctattaatattttaacgaatgataaggtattcaaggcagggt 376
           ||||||||||| | ||||||||||||||||||||||| |||||| || ||||||||||| 
Sbjct: 410 cagggatacggaagatcgctattaatattttaacgaaagataagatactcaaggcaggg- 468

Query: 377 taagacgcaagatg 390
                 ||||||||
Sbjct: 469 ------gcaagatg 476

2) yhhI in NC_011751


>NC_008563_P1|23|G22|117622520|YP_851433.1|Escherichia_coli_APEC_O1|+|27950..28435|yhhI|APECO1_1751|transposase 
          Length = 486

 Score = 608 bits (1570), Expect = e-174
 Identities = 340/374 (91%)
 Strand = Plus / Plus

Query: 53  aaatccatcttcatattgtttgcgatgtccctgatgaacttattgatttcacgtttgaat 112
           |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aaatccgtcttcatattatttgcgatgtccctgatgaacttattgatttcacgtttgaat 169

Query: 113 ggaaaggtcagaagaaattatgcgtggcagtctccttttggtcaataatagcagaacaaa 172
           ||||||  | ||||||||||||| |||||||||||||| | ||||||||| |||||||||
Sbjct: 170 ggaaagagctgaagaaattatgcatggcagtctcctttcgttcaataataacagaacaaa 229

Query: 173 agaaagagccagaaatgacggtcagatattatatcagttctgctgatttaaccgcaaaaa 232
           ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| | |
Sbjct: 230 agaaagagccagaaatgacggacagatattatagcatttctgctgatttaaccgcagaga 289

Query: 233 agttcgccacagcgatacgaaatcactggcacgtggagaataagctgcactggcgtctgg 292
           |||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 290 agttcgccacagcgaaccgaaatcactggtacgtggagaataagctgcactggcatctgg 349

Query: 293 acgtggtaatgaacgaagacgactgcaaaataagaagaggaaacgccgcagaattatttt 352
           |||||||||||||  |||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 350 acgtggtaatgaataaagacgactgcaaaataagaagaggaaatgcagcagaattatttt 409

Query: 353 cagggatacggcacatcgctattaatattttaacgaatgataaggtattcaaggcagggt 412
           ||||||||||| | ||||||||||||||||||||||| |||||| || ||||||||||| 
Sbjct: 410 cagggatacggaagatcgctattaatattttaacgaaagataagatactcaaggcaggg- 468

Query: 413 taagacgcaagatg 426
                 ||||||||
Sbjct: 469 ------gcaagatg 476