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Homologs of tir gene of AF071034

12

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECH74115_5056
( YP_002273160.1 )

Tir

NC_011353
(Escherichia coli EC4115)

0.0

100

2) tir
( NP_290261.1 )

translocated intimin receptor protein

NC_002655
(Escherichia coli EDL933)

0.0

100

3) ECs4561
( NP_312588.1 )

hypothetical protein

NC_002695
(Escherichia coli Sakai)

0.0

100

4) tir
( YP_003080473.1 )

translocated intimin receptor protein

NC_013008
(Escherichia coli TW14359)

0.0

100

5) CDCO157_4295
( YP_006315161.1 )

hypothetical protein

NC_017906
(Escherichia coli Xuzhou21)

0.0

100

6) tir
( YP_003501867.1 )

translocated intimin receptor Tir

NC_013941
(Escherichia coli CB9615)

0.0

99

7) ECO55CA74_21195
( YP_006161344.1 )

translocated intimin receptor Tir

NC_017656
(Escherichia coli RM12579)

0.0

99

8) tir
( YP_003223468.1 )

translocated intimin receptor Tir

NC_013353
(Escherichia coli 12009)

3e-120

66

9) tir
( YP_003232160.1 )

translocated intimin receptor Tir

NC_013361
(Escherichia coli 11368)

1e-115

66

10) tir
( YP_002331403.1 )

translocated intimin receptor Tir

NC_011601
(Escherichia coli E2348/69)

7e-105

60

11) tir
( YP_003236081.1 )

putative translocated intimin receptor Tir

NC_013364
(Escherichia coli 11128)

1e-83

59

12) tir
( YP_003366495.1 )

Tir, translocated intimin receptor

NC_013716
(Citrobacter rodentium ICC168)

2e-70

57

• Sequence Alignments

1) ECH74115_5056 in NC_011353


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  689 bits (2604),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 558/558 (100%), Positives = 558/558 (100%), Gaps = 0/558 (0%)

Query  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60
            MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60

Query  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120
            NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA
Sbjct  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120

Query  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180
            VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL
Sbjct  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180

Query  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENttetqtststssLRSDPKLWLALGTVAT  240
            ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT
Sbjct  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT  240

Query  241  GLIGLAATGIVQALALtpepdsptttdpdaaasatetatRDQLTKEAFQNPDNQKVNIDE  300
            GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE
Sbjct  241  GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE  300

Query  301  LGNAIPSGVLKDDVVANieeqakaageeakqqaieNNAQAQKKYDEQQAKRQEELKvssg  360
            LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG
Sbjct  301  LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG  360

Query  361  agyglsgalilgggigvavTAALHRKNQPVEQtttttttttttSARTVENKPANNTPAQG  420
            AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG
Sbjct  361  AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG  420

Query  421  NVDTPGSEDtmesrrssmastsstffdtssIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480
            NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ
Sbjct  421  NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480

Query  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540
            NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN
Sbjct  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540

Query  541  SAVNTSNNPPAPGSHRFV  558
            SAVNTSNNPPAPGSHRFV
Sbjct  541  SAVNTSNNPPAPGSHRFV  558

2) tir in NC_002655


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  689 bits (2604),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 558/558 (100%), Positives = 558/558 (100%), Gaps = 0/558 (0%)

Query  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60
            MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60

Query  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120
            NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA
Sbjct  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120

Query  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180
            VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL
Sbjct  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180

Query  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENttetqtststssLRSDPKLWLALGTVAT  240
            ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT
Sbjct  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT  240

Query  241  GLIGLAATGIVQALALtpepdsptttdpdaaasatetatRDQLTKEAFQNPDNQKVNIDE  300
            GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE
Sbjct  241  GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE  300

Query  301  LGNAIPSGVLKDDVVANieeqakaageeakqqaieNNAQAQKKYDEQQAKRQEELKvssg  360
            LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG
Sbjct  301  LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG  360

Query  361  agyglsgalilgggigvavTAALHRKNQPVEQtttttttttttSARTVENKPANNTPAQG  420
            AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG
Sbjct  361  AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG  420

Query  421  NVDTPGSEDtmesrrssmastsstffdtssIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480
            NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ
Sbjct  421  NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480

Query  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540
            NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN
Sbjct  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540

Query  541  SAVNTSNNPPAPGSHRFV  558
            SAVNTSNNPPAPGSHRFV
Sbjct  541  SAVNTSNNPPAPGSHRFV  558

3) ECs4561 in NC_002695


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  689 bits (2604),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 558/558 (100%), Positives = 558/558 (100%), Gaps = 0/558 (0%)

Query  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60
            MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60

Query  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120
            NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA
Sbjct  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120

Query  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180
            VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL
Sbjct  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180

Query  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENttetqtststssLRSDPKLWLALGTVAT  240
            ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT
Sbjct  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT  240

Query  241  GLIGLAATGIVQALALtpepdsptttdpdaaasatetatRDQLTKEAFQNPDNQKVNIDE  300
            GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE
Sbjct  241  GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE  300

Query  301  LGNAIPSGVLKDDVVANieeqakaageeakqqaieNNAQAQKKYDEQQAKRQEELKvssg  360
            LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG
Sbjct  301  LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG  360

Query  361  agyglsgalilgggigvavTAALHRKNQPVEQtttttttttttSARTVENKPANNTPAQG  420
            AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG
Sbjct  361  AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG  420

Query  421  NVDTPGSEDtmesrrssmastsstffdtssIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480
            NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ
Sbjct  421  NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480

Query  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540
            NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN
Sbjct  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540

Query  541  SAVNTSNNPPAPGSHRFV  558
            SAVNTSNNPPAPGSHRFV
Sbjct  541  SAVNTSNNPPAPGSHRFV  558

4) tir in NC_013008


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  689 bits (2604),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 558/558 (100%), Positives = 558/558 (100%), Gaps = 0/558 (0%)

Query  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60
            MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60

Query  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120
            NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA
Sbjct  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120

Query  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180
            VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL
Sbjct  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180

Query  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENttetqtststssLRSDPKLWLALGTVAT  240
            ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT
Sbjct  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT  240

Query  241  GLIGLAATGIVQALALtpepdsptttdpdaaasatetatRDQLTKEAFQNPDNQKVNIDE  300
            GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE
Sbjct  241  GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE  300

Query  301  LGNAIPSGVLKDDVVANieeqakaageeakqqaieNNAQAQKKYDEQQAKRQEELKvssg  360
            LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG
Sbjct  301  LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG  360

Query  361  agyglsgalilgggigvavTAALHRKNQPVEQtttttttttttSARTVENKPANNTPAQG  420
            AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG
Sbjct  361  AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG  420

Query  421  NVDTPGSEDtmesrrssmastsstffdtssIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480
            NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ
Sbjct  421  NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480

Query  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540
            NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN
Sbjct  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540

Query  541  SAVNTSNNPPAPGSHRFV  558
            SAVNTSNNPPAPGSHRFV
Sbjct  541  SAVNTSNNPPAPGSHRFV  558

5) CDCO157_4295 in NC_017906


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  689 bits (2604),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 558/558 (100%), Positives = 558/558 (100%), Gaps = 0/558 (0%)

Query  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60
            MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60

Query  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120
            NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA
Sbjct  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120

Query  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180
            VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL
Sbjct  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180

Query  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENttetqtststssLRSDPKLWLALGTVAT  240
            ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT
Sbjct  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT  240

Query  241  GLIGLAATGIVQALALtpepdsptttdpdaaasatetatRDQLTKEAFQNPDNQKVNIDE  300
            GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE
Sbjct  241  GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE  300

Query  301  LGNAIPSGVLKDDVVANieeqakaageeakqqaieNNAQAQKKYDEQQAKRQEELKvssg  360
            LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG
Sbjct  301  LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG  360

Query  361  agyglsgalilgggigvavTAALHRKNQPVEQtttttttttttSARTVENKPANNTPAQG  420
            AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG
Sbjct  361  AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG  420

Query  421  NVDTPGSEDtmesrrssmastsstffdtssIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480
            NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ
Sbjct  421  NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480

Query  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540
            NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN
Sbjct  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540

Query  541  SAVNTSNNPPAPGSHRFV  558
            SAVNTSNNPPAPGSHRFV
Sbjct  541  SAVNTSNNPPAPGSHRFV  558

6) tir in NC_013941


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  685 bits (2589),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 556/558 (99%), Positives = 556/558 (99%), Gaps = 2/558 (0%)

Query  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60
            MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60

Query  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120
            NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA
Sbjct  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120

Query  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180
            VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL
Sbjct  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180

Query  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENttetqtststssLRSDPKLWLALGTVAT  240
            ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT
Sbjct  181  ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVAT  240

Query  241  GLIGLAATGIVQALALtpepdsptttdpdaaasatetatRDQLTKEAFQNPDNQKVNIDE  300
            GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE
Sbjct  241  GLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDE  300

Query  301  LGNAIPSGVLKDDVVANieeqakaageeakqqaieNNAQAQKKYDEQQAKRQEELKvssg  360
            LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG
Sbjct  301  LGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSG  360

Query  361  agyglsgalilgggigvavTAALHRKNQPVEQ--tttttttttSARTVENKPANNTPAQG  418
            AGYGLSGALILGGGIGVAVTAALHRKNQPVEQ  TTTTTTTTTSARTVENKPANNTPAQG
Sbjct  361  AGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANNTPAQG  420

Query  419  NVDTPGSEDtmesrrssmastsstffdtssIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  478
            NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ
Sbjct  421  NVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTSVQ  480

Query  479  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  538
            NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN
Sbjct  481  NMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSN  540

Query  539  SAVNTSNNPPAPGSHRFV  556
            SAVNTSNNPPAPGSHRFV
Sbjct  541  SAVNTSNNPPAPGSHRFV  558

7) ECO55CA74_21195 in NC_017656


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  679 bits (2566),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 556/564 (99%), Positives = 556/564 (99%), Gaps = 8/564 (1%)

Query  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60
            MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD  60

Query  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120
            NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA
Sbjct  61   NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA  120

Query  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180
            VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL
Sbjct  121  VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL  180

Query  181  ELLEPKGTGESKGAGESKGAGESKGVGELRESNSGAENttetqtststssLRSDPKLWLA  240
            ELLEPKGT      GESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLA
Sbjct  181  ELLEPKGT------GESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLA  234

Query  241  LGTVATGLIGLAATGIVQALALtpepdsptttdpdaaasatetatRDQLTKEAFQNPDNQ  300
            LGTVATGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQ
Sbjct  235  LGTVATGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQ  294

Query  301  KVNIDELGNAIPSGVLKDDVVANieeqakaageeakqqaieNNAQAQKKYDEQQAKRQEE  360
            KVNIDELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEE
Sbjct  295  KVNIDELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEE  354

Query  361  LKvssgagyglsgalilgggigvavTAALHRKNQPVEQ--tttttttttSARTVENKPAN  418
            LKVSSGAGYGLSGALILGGGIGVAVTAALHRKNQPVEQ  TTTTTTTTTSARTVENKPAN
Sbjct  355  LKVSSGAGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPAN  414

Query  419  NTPAQGNVDTPGSEDtmesrrssmastsstffdtssIGTVQNPYADVKTSLHDSQVPTSN  478
            NTPAQGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSN
Sbjct  415  NTPAQGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSN  474

Query  479  SNTSVQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGG  538
            SNTSVQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGG
Sbjct  475  SNTSVQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGG  534

Query  539  LTGGSNSAVNTSNNPPAPGSHRFV  562
            LTGGSNSAVNTSNNPPAPGSHRFV
Sbjct  535  LTGGSNSAVNTSNNPPAPGSHRFV  558

8) tir in NC_013353


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  425 bits (1600),  Expect = 3e-120, Method: Compositional matrix adjust.
 Identities = 367/560 (66%), Positives = 467/560 (84%), Gaps = 24/560 (4%)

Query  1    MPIGNLGHNPNVRALIPPAPPLPSQTDGAGGARNQLINSNGPMGSRLLFTPIRNsvadaa  60
            MPIGNLGHNPNV   IPPAPPLPSQTDGAGG R QLINS GP+GSR LFTP+RNS+AD++
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGG-RGQLINSTGPLGSRALFTPVRNSMADSG  59

Query  61   dsrasdIPGLPTNPLRFAASEVSLHGALEVLHDKGGLDTLNSAIGSSLFRVETRDDGSHV  120
            D+RASD+PGLP NP+R+AASE++L++++EVLHD G LDTLN  IGSS+FRVET++DG H+
Sbjct  60   DNRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHI  119

Query  121  AIGQKNGLETTVVLSDQEFSSLQSLDPEGKNKFVFTGGRGGAGHAMVTVASDIAEARQRI  180
            A+GQ+NG+ET+VVLSDQE++ LQS+DPEGK+KFVFTGGRGGAGHAMVTVASDI+EARQRI
Sbjct  120  AVGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRI  179

Query  181  IDKLEPKDTKETKEPG---------DPNSGEGKIIEIHtststssLRADPKLWLSLGTIA  231
            ++ LEPK+T E+K +G         ++NSG  +  E +TSTSTSSLR+DPKLWL+LGT+A
Sbjct  180  LELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVA  239

Query  232  AGLIGMAATGIAQAVALtpepddptttdpdtaastaeaatKDRLTQEAFQDPDKQKVNID  291
            +GLIG+AATGI QA+ALTPEPD PTTTDPD+AAS++E+AT+D+LT+EAFQ+PD+QKVNID
Sbjct  240  TGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNID  299

Query  292  ENGNAIPSGELIDDVVAQIAEQAKAAGEQARQEAIESNSQAQKKYDEQHAKREQEMSLSS  351
            E GNAIPSG L DDVVA+I EQAKAAGE+A+Q+AIE+N+QAQKKYDEQ+AKR++E+ +SS
Sbjct  300  ELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSS  359

Query  352  GVgygisgalilgggigagvtaalHRKNQPAEQ---------TITTRTVVDNQPTNNASA  402
            G GYG+SGALILGGGIG +VTAALHRKNQP EQ         T ++RT V+N+P+NN++A
Sbjct  360  GAGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSART-VENKPANNTPA  418

Query  403  QGNTDTSGPEEspasrrnsnaslasngsDTSSTGTVENPYADVGMPRNDSLARIPEEPIY  462
            QGN DT+G+E++  SRR+S AS +S   DTSS GTV+NPYADV  + +DS    ++    
Sbjct  419  QGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTS  478

Query  463  DEVAADPN---YSVIQHFSGNSPVTG-RLVGTPGQGIQSTYallassgglrlgmggltgg  518
             +  ++ +   YS IQH + ++   G RL+G P+ GIQSTYA LA SGGLR +MGGLTGG
Sbjct  479  VQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGG  538

Query  519  gesaVSTANASPTPGPARFV  538
            ++SAV+T+N +P+PG+ RFV
Sbjct  539  SNSAVNTSNNPPAPGSHRFV  558

9) tir in NC_013361


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  409 bits (1540),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 369/560 (66%), Positives = 467/560 (84%), Gaps = 24/560 (4%)

Query  1    MPIGNLGHNPNVRALIPPAPPLPSQTDGAGGARNQLINSNGPMGSRLLFTPIRNsvadaa  60
            MPIGNLGHNPNV   IPPAPPLPSQTDGAGG R QLINS GP+GSR LFTP+RNS+AD++
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGG-RGQLINSTGPLGSRALFTPVRNSMADSG  59

Query  61   dsrasdIPGLPTNPLRFAASEVSLHGALEVLHDKGGLDTLNSAIGSSLFRVETRDDGSHV  120
            D+RASD+PGLP NP+R+AASE++L++++EVLHD G LDTLN  IGSS+FRVET++DG H+
Sbjct  60   DNRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHI  119

Query  121  AIGQKNGLETTVVlseqefsslqslDPEGKNKFVFTGGRGGAGHAMVTVASDIAEARQRI  180
            A+GQ+NG+ET+VVLS+QE++ LQS+DPEGK+KFVFTGGRGGAGHAMVTVASDI+EARQRI
Sbjct  120  AVGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRI  179

Query  181  IDKLEPKDTKETKEPG---------DPNSGEGKIIEIHtststssLRADPKLWLSLGTIA  231
            ++ LEPK+T E+K +G         ++NSG  +  E +TSTSTSSLR+DPKLWL+LGT+A
Sbjct  180  LELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLALGTVA  239

Query  232  AGLIGMAATGIAQAVALtpepddpittdpdaaantaeaaaKDQLTKEAFQNPDNQKVNID  291
            +GLIG+AATGI QA+ALTPEPD P TTDPDAAA+++E+A++DQLTKEAFQNPDNQKVNID
Sbjct  240  TGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNID  299

Query  292  ENGNAIPSGELKDDVVAQIAEQAKAAGEQARQEAIESNSQAQQKYDEQHAKREQEMSLSS  351
            E GNAIPSG LKDDVVA+I EQAKAAGE+A+Q+AIE+N+QAQ+KYDEQ+AKR++E+ +SS
Sbjct  300  ELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSS  359

Query  352  GVgygisgalilgggigagvtaalHRKNQPAEQ---------TITTRTVVDNQPTNNASA  402
            G GYG+SGALILGGGIG +VTAALHRKNQP EQ         T ++RT V+N+P+NN++A
Sbjct  360  GAGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSART-VENKPANNTPA  418

Query  403  QGNTDTSGPEEspasrrnsnaslasngsDTSSTGTVENPYADVGMPRNDSLARISEEPIY  462
            QGN DT+G+E++  SRR+S AS +S   DTSS GTV+NPYADV  + +DS    S+    
Sbjct  419  QGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTS  478

Query  463  DEVAADPN---YSVIQHFSGNSPVTG-RLVGTPGQGIQSTYallassgglrlgmggltgg  518
             +  ++ +   YS IQH + ++   G RL+G P+ GIQSTYA LA SGGLR +MGGLTGG
Sbjct  479  VQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGG  538

Query  519  gesaVSTANAAPTPGPARFV  538
            ++SAV+T+N +P+PG+ RFV
Sbjct  539  SNSAVNTSNNPPAPGSHRFV  558

10) tir in NC_011601


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  374 bits (1405),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 336/567 (60%), Positives = 434/567 (77%), Gaps = 26/567 (4%)

Query  1    MPIgnlgnnvngnHLIPPAPPLPSQTDGAARGGTGHLISSTGALGSRSLFSPLRNSMADS  60
            MPIGNLG+N N N+ IPPAPPLPSQTDGA  GG G+LI+STG+LGSR+LF+P+RNSMADS
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGA--GGRGQLINSTGPLGSRALFTPVRNSMADS  58

Query  61   VDSR--DIPGLPTNPSRLAAATSETCLLGGFEVLHDKGPLDILNTQIGPSAFRVEVQADG  118
             D+R  D+PGLP NP RLAA  SE  L +GFEVLHD GPLD LN QIG+S FRVE Q DG
Sbjct  59   GDNRASDVPGLPVNPMRLAA--SEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDG  116

Query  119  THAAIGEKNGLEVSVTLSPQEWSSLQSIDTEGKNRFVFTGGRGGSGHPMVTVASDIAEAR  178
             H A+G++NG+E SV LS QE + LQSID EGK++FVFTGGRGG+GH+MVTVASDI+EAR
Sbjct  117  KHIAVGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEAR  176

Query  179  TKILAKLDPDNHGGRQPKDV-DTRSVGVGSASGIDDGVVSETHTSTTNSSVRSDPKFWVS  237
             +IL  L+P   G  ++K+  ++++VG    S  +    +ET+TST+ SS+RSDPK+W++
Sbjct  177  QRILELLEPKGTG--ESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLA  234

Query  238  VgaiaaglaglaatgiaqalaltpepddptttdpdQAANAAESATKDQLTQEAFKNPENQ  297
            +G++A+GL GLAATGI QALALTPEPD PTTTDPD AA+A+E+AT+DQLT+EAF+NP+NQ
Sbjct  235  LGTVATGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQ  294

Query  298  KVNIDANGNAIPSGELKDDIVEQIAQQAKEAGEVARQQAVESNAQAQQRYEDQHARRQEE  357
            KVNID  GNAIPSG LKDD+V +I +QAK AGE A+QQA+E+NAQAQ++Y++Q+A+RQEE
Sbjct  295  KVNIDELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEE  354

Query  358  LQLSSGIGYGLSSalivaggigagvttalHRRNQPAEq------tttttthtvvqqqtGG  411
            L++SSG GYGLS+ALI++GGIG +VT+ALHR+NQP EQ      TTTTT+   V+++ + 
Sbjct  355  LKVSSGAGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPAN  414

Query  412  NTPAQGGTDATRAEDASLNRRDSQGSVASTHWSDSSSEVV-NPYAEVGGARNSLSAHQ-P  469
            NTPAQG  D+  +ED+  +RR S +S +ST    SS   V NPYA+V   + SL   Q P
Sbjct  415  NTPAQGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADV---KTSLHDSQVP  471

Query  470  EEHIYDEV-----AADPGYSVIQNFSGSGPVTG-RLIGTPGQGIQSTYALLANSGGLRLG  523
              +    V     +    YS IQ+ +      G RL+G P+ GIQSTYA LA SGGLR +
Sbjct  472  TSNSNTSVQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHD  531

Query  524  MGGLTSGGESAVSSVNAAPTPGPVRFV  550
            MGGLT+G++SAV++ N +P+PG+ RFV
Sbjct  532  MGGLTGGSNSAVNTSNNPPAPGSHRFV  558

11) tir in NC_013364


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  303 bits (1137),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 332/564 (59%), Positives = 443/564 (79%), Gaps = 19/564 (3%)

Query  1    MPIgnlgnnvnsnnlIPPAPPLPSQTDGASRGGAGQLINSTGALGSRLLFSPLRNSIADS  60
            MPIGNLG+N N NN IPPAPPLPSQTDGA  GG GQLINSTG+LGSR LF+P+RNS+ADS
Sbjct  1    MPIGNLGHNPNVNNSIPPAPPLPSQTDGA--GGRGQLINSTGPLGSRALFTPVRNSMADS  58

Query  61   VDSR--DIPGLPVHPSRLATATSEICLLGGFEVLHDKGPLDTLNKQIGASAFRIEQQSDG  118
             D+R  D+PGLPV+P RLA+  SEI L +GFEVLHD GPLDTLN+QIG+S FR+E Q DG
Sbjct  59   GDNRASDVPGLPVNPMRLAA--SEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDG  116

Query  119  SYAAIGEKNGVEVSVILNSQELQSLQAIDIEDKgrfvftggrggggHSMVTPASDIAEAR  178
               A+G++NGVE SV+L+ QE   LQ+ID E+K++FVFTGGRGG+GH+MVT ASDI+EAR
Sbjct  117  KHIAVGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEAR  176

Query  179  AKILAKLDPNNHGGSQARNVDTRSVGVGSASGMddsvvsetrtsstassvrsdPKFWVSi  238
             +IL  L+P+  G S++   ++++VG    S  +    +ET+TS+++SS+RSDPK+W+++
Sbjct  177  QRILELLEPKGTGESKG-AGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLAL  235

Query  239  gaiaaglaglaatgitqalaltpepddptttdpeQAASAAESATRDQLTQEAFKNPENQK  298
            G++A+GL GLAATGI QALALTPEPD PTTTDP+ AASA+E+ATRDQLT+EAF+NP+NQK
Sbjct  236  GTVATGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQK  295

Query  299  VSIDEIGNSIPSGELKDDVVAKIEEQAKEAGEAARQQAVESNAQAQQRYDTQYARRQEEL  358
            V+IDE+GN+IPSG LKDDVVA+IEEQAK AGE A+QQA+E+NAQAQ++YD Q A+RQEEL
Sbjct  296  VNIDELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEEL  355

Query  359  ELSSGIGYslssalivgggigagvttalHRRNQPAEq------tttttthtvvqqqtGGN  412
             +SSG GY+LS+ALI+GGGIG +VT+ALHR+NQP EQ      TTTTT+   V+++ + N
Sbjct  356  KVSSGAGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTVENKPANN  415

Query  413  TPAQGGTDAIRAEDTSLNRRDSQRSTASTHWSDTS-SAVVNPYAEVGEARNSSPARQAEE  471
            TPAQG  D+  +EDT  +RR S  ST+ST    +S ++V NPYA+V  + + S    ++ 
Sbjct  416  TPAQGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNS  475

Query  472  HIYDEVAADPN---YSVIQNFS-GNNQVTGRLMGTPGQGIQSTYAILTNNSAglrlgmgg  527
            +   +  ++ +   YS IQ+ + +  +  +RL+G P+ GIQSTYA L+ +++ LR +MGG
Sbjct  476  NTSVQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGG-LRHDMGG  534

Query  528  ltgsggSAVNTANAAPTPGPGRFV  551
            LTG++ SAVNT+N +P+PG+ RFV
Sbjct  535  LTGGSNSAVNTSNNPPAPGSHRFV  558

12) tir in NC_013716


> AF071034|27|G26|3414895|AAC31506.1|Escherichia_coli_O157:H7_str._EDL933_ATCC43895|-|19954..21630|tir|-|L0027
Length=558

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 266/471 (57%), Positives = 359/471 (77%), Gaps = 15/471 (3%)

Query  52   PLRSSIVDTVDSR--DVPGLPEHPLRFATSETCLHGGFEVLHDKGPLDTLNQKIGSSVFR  109
            P+R+S+ D+ D+R  DVPGLP +P+R+A+SE  L++GFEVLHD GPLDTLN++IGSSVFR
Sbjct  50   PVRNSMADSGDNRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFR  109

Query  110  VEQQPDGTHAAIGVKDGVEVSVTlnsselqslqslDTEGNGRFVFTGGRGGSGHAMVTVA  169
            VE Q DG H A+G ++GVE SV L+  E   LQS+D EG+++FVFTGGRGG+GHAMVTVA
Sbjct  110  VETQEDGKHIAVGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVA  169

Query  170  SDISQAREKIIAKLDPDNHGGRQPKDIDTRSVGVGSASGMGDGvvsethtstttssvrsD  229
            SDI++AR++I+  L+P   G  +  + ++++VG    S  G    +ET+TST+TSS+RSD
Sbjct  170  SDITEARQRILELLEPKGTGESKGAG-ESKGVGELRESNSGAENTTETQTSTSTSSLRSD  228

Query  230  PKFWVSVgaiaaglaglaatgiVQAVALtpapddptttdpdeaanaaeaatKDQLTKEAF  289
            PK+W+++G++A+GL GLAATGIVQA+ALTP PD PTTTDPD AA+A+E+AT+DQLTKEAF
Sbjct  229  PKLWLALGTVATGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAF  288

Query  290  QNPDNQKVNIDELGNAIPSGELKDDVVAQIADQAKVAGEQARQQAVESNaqaqqrhddqq  349
            QNPDNQKVNIDELGNAIPSG LKDDVVA+I +QAK AGE+A+QQA+E+NAQAQ++ D+QQ
Sbjct  289  QNPDNQKVNIDELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQ  348

Query  350  akrqqELDLSSGIGYglssalivgggigagvTAMLHRRNPPTEQ-------TIATTHSVI  402
            AKRQ+EL +SSG GYGLS+ALI+GGGIG +VTA LHR+N P EQ       T +T+   +
Sbjct  349  AKRQEELKVSSGAGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTTTSARTV  408

Query  403  QQQTGGNTRAQGGADTTGVENASLTRRDSQASVASTQWSDTS-GDVVNPYAEGWMSRNNP  461
            +++ + NT AQG  DT G E++  +RR S AS +ST    +S G V NPYA+   S +++
Sbjct  409  ENKPANNTPAQGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDS  468

Query  462  SLLAPEEPIYDEVAPDPN---YSVIQHFSGNNPVTG-RLVGSPGQGIQSTY  508
             + +++     +   + +   YS IQH + +    G RL+G+P+ GIQSTY
Sbjct  469  QVPTSNSNTSVQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTY  519