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Homologs of hrcC gene of AY597278

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcC
( NP_791216.2 )

outer-membrane type III secretion protein HrcC

NC_004578
(Pseudomonas syringae DC3000)

0.0

2) HrcC
( YP_234292.1 )

outer-membrane type III secretion protein HrcC

NC_007005
(Pseudomonas syringae B728a)

0.0

3) hrcC
( YP_273539.1 )

type III outer membrane protein HrcC

NC_005773
(Pseudomonas syringae 1448A)

0.0

4) Pmen_0023
( YP_001185530.1 )

YscC/HrcC family type III secretion outer membrane protein

NC_009439
(Pseudomonas mendocina ymp)

0.0

5) PSEBR_a5375
( YP_004356884.1 )

type III secretion protein

NC_015379
(Pseudomonas brassicacearum NFM421)

3e-166

6) hrcC
( YP_005210961.1 )

protein HrcC

NC_016830
(Pseudomonas fluorescens F113)

4e-166

7) rscC
( YP_002870386.1 )

putative type III secretion protein

NC_012660
(Pseudomonas fluorescens SBW25)

1e-144

8) rscC
( YP_006322237.1 )

type III secretion outer membrane protein RscC

NC_017911
(Pseudomonas fluorescens A506)

4e-144

9) H045_00215
( YP_007395615.1 )

putative type III secretion protein

NC_020209
(Pseudomonas poae RE*1-1-14)

5e-144

10) hrcC
( YP_003883223.1 )

type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)

NC_014500
(Dickeya dadantii 3937)

2e-140

11) hrcC
( YP_003539947.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

5e-138

12) hrcC
( YP_003529907.1 )

type III secretion system outer membrane pore HrcC

NC_013961
(Erwinia amylovora CFBP1430)

5e-138

13) hrcC
( YP_050195.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

5e-134

14) PC1_2192
( YP_003017767.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_012917
(Pectobacterium carotovorum PC1)

1e-132

15) PCC21_022700
( YP_006646926.1 )

HrcC

NC_018525
(Pectobacterium carotovorum PCC21)

3e-132

16) Marme_1063
( YP_004312174.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_015276
(Marinomonas mediterranea MMB-1)

3e-124

• Sequence Alignments

1) hrcC in NC_004578


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  935 bits (3543),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 575/703 (82%), Positives = 661/703 (95%), Gaps = 10/703 (1%)

Query  1    MRKALMWLPLLLIGVIPATWAVTPEAWKHTAYAYDARQTELSTALADFAREFGMSLDMSP  60
            MRKALMWLPLLLIG++P+TWA  P++WKHTAYAYDAR+TELSTAL+DFA+EFGM+LDM+P
Sbjct  1    MRKALMWLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAP  60

Query  61   VQGKLDGRIRAQNPEEFLERLSQEYHFQWFVYNDTLYVSPSSEHTSARIEVSPDAVDDLQ  120
            + GKLDGRIRA+NP+EFLERL+QEYHFQWFVYNDTLY+SP+SEHTSARIEVS+DAVDDLQ
Sbjct  61   ISGKLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQ  120

Query  121  TALTDVGLLDKRFGWGSLPDEGVVLVRGPAKYVEFVRDYSKKVEKPDEKADKQDVVVLPL  180
            TALTDVGLLDKRFGWGSLP+EGVVLVRGPAKYV++VRDYSKKV+  D K++KQDVVV+PL
Sbjct  121  TALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTD-KGEKQDVVVFPL  179

Query  181  KYANAADRTIRYRDQQLVVAGVASILQELLESRSRGESIDSVNLLPGQGSSVANSTGV--  238
            KYANAADRTIRYRDQQL VAGVASILQELL++RSRG+SI++VNLL G+G + +  +    
Sbjct  180  KYANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLL-GHGRPGGGFSEGGG  238

Query  239  -AAAGLPYNLGSNGIDTGALQQGIDRVLNFNSKKTAKGHASG-KANIRVSADVRNNSVLI  296
               + +PYNL++NGIDTGALQQG+DRVL++ SKK++KG A+G +ANIRVSADVRNN+VLI
Sbjct  239  SDEPNVPYNLSANGIDTGALQQGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLI  298

Query  297  YDLPERKAMYQKLVKELDVPRNLIEIDAVILDIDRNELAELSSRWNFNAGSVGGGANLFD  356
            YDLP+RKAMY+KL+KELDVPRNLIEIDAVILDIDRNELAEL+SRWNF++G+V    N+FD
Sbjct  299  YDLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGV----NMFD  354

Query  357  AGTSSTLFLQNASKFSAELHALEGNGSASVIGNPSILTLENQPAVIDLSRTEYLTATSER  416
            AGT+STLF+QNA+KFSAELHALEGNGSASVIGNPSILTLENQPAVID+SRTEY+TATSER
Sbjct  355  AGTTSTLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSER  414

Query  417  AADILPITAGTSLQVIPRSLDNDGKPQVQMIVDIEDGQIDVSTINDTQPSVRRGNVSTQA  476
             A+I PITAGTSLQVIPRSLD+DGKPQVQ+IVDIEDGQIDVS IN  QPSVR+GNVSTQA
Sbjct  415  VANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQA  474

Query  477  VIAEHGSLVIGGFHGLEANDRIHKIPLLGDIPYIGKllfqsrsrelsqrerlfILTPRLI  536
            VIAEHGSLV+GGFHGLEAND++HKIPLLGDIPYIGKLLFQSRSRE+++RERLFILTPRLI
Sbjct  475  VIAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLI  534

Query  537  GDQVNPARYVQNGNPHDVDDQMKKIKERRDGGELPTRGDIQKVFTQMIDGAAPEGLRAGQ  596
            GDQVNPARYVQNGNPHD+D QMK IKERRDGG+LPTR D+Q+VFTQM+DG AP G++ G+
Sbjct  535  GDQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGE  594

Query  597  TLPFETDSLCDPGEGLTLDGQRSQWFVKKDWGVAVVVARNNTDKPVRIDESRCGGRWVIG  656
            T+PFETDSLCDPGEGLTLD  RSQWFV+K+WGVAVVVA+NNT+KPVRIDESRCGGRWVIG
Sbjct  595  TMPFETDSLCDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIG  654

Query  657  VAAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP  699
            V+AWPHAW+QPGEESEVYIA+RQPQ+SKMAKESRPSLLR + P
Sbjct  655  VTAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRTAP  697

2) HrcC in NC_007005


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  927 bits (3512),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 581/702 (83%), Positives = 659/702 (94%), Gaps = 7/702 (0%)

Query  1    MRKALMWLPLLLIGLSPATWAVTPEAWKHTAYAYDARQTELATALADFAKEFGMALDMPP  60
            MRKALMWLPLLLIG+ P+TWA  P++WKHTAYAYDAR+TEL+TAL+DFAKEFGMALDM+P
Sbjct  1    MRKALMWLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAP  60

Query  61   IPGVLDDRIRAQSPEEFLDRLGQEYHFQWFVYNDTLYVSPSSEHTSARIEVSSDAVDDLQ  120
            I+G LD+RIRA++P+EFL+RL+QEYHFQWFVYNDTLY+SP+SEHTSARIEVSSDAVDDLQ
Sbjct  61   ISGKLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQ  120

Query  121  TALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYSKKVEAPEKGDKQDIIVFPLK  180
            TALTDVGLLDKRFGWG LPNEGVVLVRGPAKYV+LVRDYSKKV++ +KG+KQD++VFPLK
Sbjct  121  TALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLK  180

Query  181  YASAADRTIRYRDQQLVVAGVASILQDLLDTRSRGGSINGMDllgrggrgnglagggSPD  240
            YA+AADRTIRYRDQQL VAGVASILQ+LLDTRSRG+SING++LLG+G  G G++ GG++D
Sbjct  181  YANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSD  240

Query  241  APSLP--MSSSGLDTNALEQGLDQVLHYggggksagksrsggraNIRVTADVRNNAVLIY  298
             P++P  +S++G+DT AL+QGLD+VL YG+   + GK+ +G   NIRV+ADVRNNAVLIY
Sbjct  241  EPNVPYNLSANGIDTGALQQGLDRVLSYGSKKSGKGKAGGGRA-NIRVSADVRNNAVLIY  299

Query  299  DLPSRKAMYEKLIKELDVSRNLIEIDAVILDIDRNELAELSSRWNFNAGSVNGGANMFDA  358
            DLP RKAMYEKLIKELDV+RNLIEIDAVILDIDRNELAEL+SRWNF++G+VN    MFDA
Sbjct  300  DLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGVN----MFDA  355

Query  359  GTSSTLFIQNAGKFAAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYLTATSERV  418
            GT+STLFIQNAGKF+AELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEY+TATSERV
Sbjct  356  GTTSTLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV  415

Query  419  ANIEPITAGTSLQVTPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAV  478
            ANIEPITAGTSLQV PRSLDHDGKPQVQLIVDIEDGQID+SDIN  QPSVRKGNVSTQAV
Sbjct  416  ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAV  475

Query  479  IAEHGSLVIGGFHGLEANDKVHKVPLLGDIPYIGKllfqsrsrelsqrerlfILTPRLIG  538
            IAEHGSLV+GGFHGLEANDKVHK+PLLGDIPYIGKLLFQSRSRE+++RERLFILTPRLIG
Sbjct  476  IAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIG  535

Query  539  DQVNPARYVQNGNPHDVDDQMKRIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGET  598
            DQVNPARYVQNGNPHD+D QMK IKERRDGG+LPTR D+Q+VFTQMVDG AP GMH GET
Sbjct  536  DQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGET  595

Query  599  LPFETDSLCDPGQGLSLDGQRSQWYARKDWGVAVVVARNNTDKPVRIDESRCGGRWVIGV  658
            +PFETDSLCDPG+GL+LD  RSQW+ +K+WGVAVVVA+NNT+KPVRIDESRCGGRWVIGV
Sbjct  596  MPFETDSLCDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGV  655

Query  659  AAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP  700
            +AWPHAW+QPGEESEVYIA+RQPQ+SKMAKESRPSLLR + P
Sbjct  656  TAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRTAP  697

3) hrcC in NC_005773


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  922 bits (3492),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 587/702 (84%), Positives = 657/702 (94%), Gaps = 8/702 (1%)

Query  1    MRKALMWLPLLLIGLTPVTWAVTPEAWKHTAYAYDARQTELTTALADFAKEFGMALDMPS  60
            MRKALMWLPLLLIG+ P TWA  P++WKHTAYAYDAR+TEL+TAL+DFAKEFGMALDM++
Sbjct  1    MRKALMWLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAP  60

Query  61   IPGTLDGRIRAQSPEEFLDRLGQEYHFQWFVYNDTLYVSPSSEHTSARVEVSSDAVDDLQ  120
            I+G LDGRIRA++P+EFL+RL+QEYHFQWFVYNDTLY+SP+SEHTSAR+EVSSDAVDDLQ
Sbjct  61   ISGKLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQ  120

Query  121  TALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYSKKVETPEKGDKQDIVVFPLK  180
            TALTDVGLLDKRFGWG LPNEGVVLVRGPAKYV+LVRDYSKKV++ +KG+KQD+VVFPLK
Sbjct  121  TALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLK  180

Query  181  YANASDRTIRYRDQQLTVAGVASILQDLLDTRSRGEainginllghgganaglaggdadT  240
            YANA+DRTIRYRDQQLTVAGVASILQ+LLDTRSRG++ING+NLLGHG + +G++ G++  
Sbjct  181  YANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSD  240

Query  241  QS---LPLDSSGIDTGALQQGLDRVLSYgsgskksgksrsggrANIRVTADVRNNAVLIY  297
            ++     L ++GIDTGALQQGLDRVLSYGS     GK+ +G  ANIRV+ADVRNNAVLIY
Sbjct  241  EPNVPYNLSANGIDTGALQQGLDRVLSYGSKKSGKGKAGGGR-ANIRVSADVRNNAVLIY  299

Query  298  DLPSRKPMYEKLIKELDVSRNLIEIDAVILDIDRNELAELSSRWNFNAGSVGGGVNLFDA  357
            DLP RK+MYEKLIKELDV+RNLIEIDAVILDIDRNELAEL+SRWNF++G    GVN+FDA
Sbjct  300  DLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSG----GVNMFDA  355

Query  358  GTSSTMFIQNAGKFSSELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV  417
            GT+ST+FIQNAGKFS+ELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV
Sbjct  356  GTTSTLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV  415

Query  418  ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAV  477
            ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQID+SDIN  QPSVRKGNVSTQAV
Sbjct  416  ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAV  475

Query  478  IAEHGSLVIGGFHGLEANDKVHKIPLLGDIPYIGKllfqsrsrelsqrerlfILTPRLIG  537
            IAEHGSLV+GGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSRE+++RERLFILTPRLIG
Sbjct  476  IAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIG  535

Query  538  DQVNPARYVQNGNPHDVDDQMKRIKERRDGGELPTRGDVQKVFTQMVDGTAPVGMRTGET  597
            DQVNPARYVQNGNPHD+D QMK IKERRDGG+LPTR DVQ+VFTQMVDG AP GM+ GET
Sbjct  536  DQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGET  595

Query  598  LPFETDSLCDPGAGLTLDGQRSQWYARKDWGVAVVVAHNNTDKPVRIDESRCGGRWVIGV  657
            +PFETDSLCDPG GLTLD  RSQW+ +K+WGVAVVVAHNNT+KPVRIDESRCGGRWVIGV
Sbjct  596  MPFETDSLCDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGV  655

Query  658  AAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLKGAKP  699
            +AWPHAW+QPGEESEVYIA+RQPQ+SKMAKESRPSLL+ + P
Sbjct  656  TAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRTAP  697

4) Pmen_0023 in NC_009439


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  756 bits (2862),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 462/684 (68%), Positives = 604/684 (89%), Gaps = 9/684 (1%)

Query  18   PAHAVPPESWKQTAYAYDARQTDLNSALADFAREFGLSLDMPPMDGIVDGRIRASNPQEF  77
            P+ A  P+SWK+TAYAYDAR+T+L++AL+DFA+EFG++LDM+P+ G +DGRIRA NPQEF
Sbjct  18   PTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGKLDGRIRAENPQEF  77

Query  78   LERLGREYQFQWFVYNETLYISPTREQTSARIEVSPDAVDDLENALTAIGLLDPRFGWGT  137
            LERL++EY+FQWFVYN+TLYISP+ E+TSARIEVS+DAVDDL+ ALT +GLLD RFGWG+
Sbjct  78   LERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGS  137

Query  138  LPEEGLVLVRGPAQYVQFIREYSQKVEEPEKAEKQDVIVFTLKYANAADRSIRYRDQELR  197
            LP+EG+VLVRGPA+YV+++R+YS+KV+  +K+EKQDV+VF LKYANAADR+IRYRDQ+L 
Sbjct  138  LPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTIRYRDQQLT  197

Query  198  VAGVASILRELLETRSRGEPISGVGIF---QPSGTTQGLAPTRPMGLPYA-GMSgldggl  253
            VAGVASIL+ELL+TRSRG++I+GV ++   +P+G     + +    +PY  + +G+D G 
Sbjct  198  VAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLSANGIDTGA  257

Query  254  leqgldNVLGLAQsssrkrsesrsrsqirvsADVRNNAVLIYDLPERKAIYQGLIQQLDV  313
            L+QGLD VL+ +   S K   + +R++IRVSADVRNNAVLIYDLP+RKA+Y+ LI++LDV
Sbjct  258  LQQGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIKELDV  317

Query  314  PRNLIEIDAVILDIDRNELAELSSRWAFNSGSVSGGANLFEPGTTSTLFIQDAGRFAAEL  373
            PRNLIEIDAVILDIDRNELAEL+SRW F+SG+V    N+F++GTTSTLFIQ+AG+F+AEL
Sbjct  318  PRNLIEIDAVILDIDRNELAELASRWNFKSGGV----NMFDAGTTSTLFIQNAGKFSAEL  373

Query  374  RALEGTGAASIMGNPSILTLENQPAVIDFSRTEYLTALAERVANIQPITAGTSLQVIPRS  433
            +ALEG G+AS++GNPSILTLENQPAVIDFSRTEY+TA +ERVANI+PITAGTSLQVIPRS
Sbjct  374  HALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIPRS  433

Query  434  LNQGSRSQVQLIVDIEDGQIIESNISEEQPSVRRGNVSTQAVIAEHGSLVIGGFHSLEAN  493
            L++++++QVQLIVDIEDGQI  S+I+ +QPSVR+GNVSTQAVIAEHGSLV+GGFH+LEAN
Sbjct  434  LDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLEAN  493

Query  494  DRINKIPLLGDIPVIGKLLFQSrnrefnrrerlfilTPRLIGDQVNPARYVQHGNPHNLD  553
            D+++KIPLLGDIP IGKLLFQSR+RE+N+RERLFILTPRLIGDQVNPARYVQ+GNPH++D
Sbjct  494  DKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHDID  553

Query  554  RQLREIDERRRGTERPSRGDIEHAFTQLLDGIHPSGFD-SAPLPLRAETLCNSDHGLTLD  612
             Q++ I ERR G + P+R D+++ FTQ++DG+ P+G + +  +P+ +++LC++++GLTLD
Sbjct  554  AQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETDSLCDPGEGLTLD  613

Query  613  AERSQWFARDGWGVAVVVARNDTAQPIRIDESRCGGRWAMGVSAWPRAWLQPGEESEVFI  672
              RSQWF + GWGVAVVVA+N+T +P+RIDESRCGGRW +GV+AWP+AW+QPGEESEV+I
Sbjct  614  QTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEESEVYI  673

Query  673  ALRQPQSLQKTGQGRTSLLHRSTP  696
            A+RQPQ  + + ++R SLL+R++P
Sbjct  674  AMRQPQLSKMAKESRPSLLRRTAP  697

5) PSEBR_a5375 in NC_015379


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  578 bits (2184),  Expect = 3e-166, Method: Compositional matrix adjust.
 Identities = 340/681 (50%), Positives = 511/681 (76%), Gaps = 22/681 (3%)

Query  49   AAVPTDWKNTPYAYDAQSTPLAKVLGDFANTFAVQLVIDGTVKGTVDGRMRAESPQAFLD  108
            AA+P  WK+T+YAYDA+ T L+  L+DFA+ F++ L + + + G +DGR+RAE+PQ FL+
Sbjct  21   AAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDM-APISGKLDGRIRAENPQEFLE  79

Query  109  RLGLENRFQWFMYGNTLYVSPLQNQDSTRLEVSADAVPDMKQALTDIGLLDPRFGWGELP  168
            RL+ E +FQWF+Y +TLY+SP  ++ S+R+EVS+DAV D++ ALTD+GLLD RFGWG LP
Sbjct  80   RLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLP  139

Query  169  DEGVVLVSGPERYVRLVAQFAEVRKTPE--EKQEVISFPLRYATAADRNVKYRGETLVIP  226
            +EGVVLV GP +YV LV +++    + +  EKQ+V+ FPL+YA AADR ++YR++ L ++
Sbjct  140  NEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTIRYRDQQLTVA  199

Query  227  GVASILKGLLESRS---AVSGG--MQTASPQASFQNMQNQQ------SMTMGNIEQLAMN  275
            GVASIL+ LL++RS   +++G   +  + P ++F +    +      +++   I+  A++
Sbjct  200  GVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLSANGIDTGALQ  259

Query  276  -GMGRPNT-SRVPSGANSGAGGRGKIRVEADVRNNAVLIYDAPKRREIYTPLIRDVDVPR  333
             G++R  + +   SG   ++GGR++IRV ADVRNNAVLIYD P R+ +Y  LI+++DVPR
Sbjct  260  QGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIKELDVPR  319

Query  334  KLVEIDAIILDIDRTQLAELASNWNVESGDLIGGASMIRPGASSTVFIQDYGDFSAQLRA  393
            +L+EIDA+ILDIDR +LAELAS WN  SG    G +M+ +G++ST+FIQ+ G FSA+L+A
Sbjct  320  NLIEIDAVILDIDRNELAELASRWNFKSG----GVNMFDAGTTSTLFIQNAGKFSAELHA  375

Query  394  LEGRGLASVVANPSVLTLENQPAVIDFSRTEYISAIGERVATVEPITAGTSLQVVPHAIE  453
            LEG G ASV++NPS+LTLENQPAVIDFSRTEYI+A +ERVA +EPITAGTSLQV+P++++
Sbjct  376  LEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIPRSLD  435

Query  454  TGGRNQIQMSLEIEDGRIEPSEVGQQTPSVRRGVVSTQAVMGESRSLVVGGFHTEETGDN  513
             +G+ Q+Q+ ++IEDG+I+ S++  + PSVR+G VSTQAV++E  SLVVGGFH  E+ D+
Sbjct  436  HDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLEANDK  495

Query  514  LERVPWLGRIPLIGPLLFssttretsrrerVFILTPRLIGDQVDPARYISALDREQVDSA  573
            ++++P LG IP IG LLF S +RE ++RER+FILTPRLIGDQV+PARY+   + +++D+ 
Sbjct  496  VHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHDIDAQ  555

Query  574  MARLEERRNGTRPVGRIEVSDVLAQLADGNIPATFKQAPSIPYSPDTLCALQPGLSLDAA  633
            M  + ERR+G     R +V +V++Q+ DG  P+    + ++P+  D+LC    GL+LD +
Sbjct  556  MKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETDSLCDPGEGLTLDQT  615

Query  634  RAQWFAGPDYGIAVGVIRNDDQRRLRFDEASCGSRWTLATSAWPKVWLEPGEETEVFVVM  693
            R+QWF   + G+AV V +N+ ++ +R+DE+ CG+RW ++ +AWP  W++PGEE+EV++ M
Sbjct  616  RSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEESEVYIAM  675

Query  694  KQP--TRTPGGERPSLLQTSA  712
            +QP  ++ +   RPSLL+ +A
Sbjct  676  RQPQLSKMAKESRPSLLRRTA  696

6) hrcC in NC_016830


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  578 bits (2182),  Expect = 4e-166, Method: Compositional matrix adjust.
 Identities = 340/679 (51%), Positives = 506/679 (75%), Gaps = 22/679 (3%)

Query  51   IPTDWKNTPYAYDAQSTPLAKVLGDFANTFAVQLVIDGTVKGTVDGRMRAESPQAFLDRL  110
            IP  WK+T+YAYDA+ T L+  L+DFA+ F++ L + + + G +DGR+RAE+PQ FL+RL
Sbjct  23   IPDSWKHTAYAYDARETELSTALSDFAKEFGMALDM-APISGKLDGRIRAENPQEFLERL  81

Query  111  GLENRFQWFMYGNTLYVSPLQNQDSTRLEVSADAVPDMKQALTDIGLLDPRFGWGELPDE  170
            + E +FQWF+Y +TLY+SP  ++ S+R+EVS+DAV D++ ALTD+GLLD RFGWG LP+E
Sbjct  82   AQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLPNE  141

Query  171  GVVLVSGPERYVRLVTQFAEARKTPE--EKQEVISFPLRYATAADRNVKYRGETLVIPGV  228
            GVVLV GP +YV LV +++    + +  EKQ+V+ FPL+YA AADR ++YR++ L ++GV
Sbjct  142  GVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTIRYRDQQLTVAGV  201

Query  229  ASILKGLLESRS---AVSGG--MQTASPQASFQNMQTQQSTTM------GNIEQLALN-G  276
            ASIL+ LL++RS   +++G   +  + P ++F +    +   +        I+  AL+ G
Sbjct  202  ASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLSANGIDTGALQQG  261

Query  277  MGRPNT-SRVPSGANSGAGARGKIRVEADVRNNAVLIYDAPKRREIYTPLIRDVDVPRKL  335
            ++R  + +   SG   ++G+R++IRV ADVRNNAVLIYD P R+ +Y  LI+++DVPR+L
Sbjct  262  LDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIKELDVPRNL  321

Query  336  VEIDAIILDIDRTQLAELASNWNVESGDLIGGASMIRPGASSTVFIQDYGDFSAQLRALE  395
            +EIDA+ILDIDR +LAELAS WN  SG    G +M+ +G++ST+FIQ+ G FSA+L+ALE
Sbjct  322  IEIDAVILDIDRNELAELASRWNFKSG----GVNMFDAGTTSTLFIQNAGKFSAELHALE  377

Query  396  GRGLASVVANPSVLTLENQPAVIDFSRTEYISAIGERVATVEPITAGTSLQVVPHAIETG  455
            G G ASV++NPS+LTLENQPAVIDFSRTEYI+A +ERVA +EPITAGTSLQV+P++++ +
Sbjct  378  GNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIPRSLDHD  437

Query  456  GRNQIQMSLDIEDGRIEPSEVGQQTPSVRRGVVSTQAVMGESRSLVVGGFHTEETGDNLE  515
            G+ Q+Q+ +DIEDG+I+ S++  + PSVR+G VSTQAV++E  SLVVGGFH  E+ D+++
Sbjct  438  GKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLEANDKVH  497

Query  516  RVPWLGRIPLIGPLLFssttretsrrerVFILTPRLIGDQVDPARYISALDREQVDSAMA  575
            ++P LG IP IG LLF S +RE ++RER+FILTPRLIGDQV+PARY+   + +++D+ M 
Sbjct  498  KIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHDIDAQMK  557

Query  576  RLEERRNGTRPVGRIEVSDVLAQLADGNIPGTFKQAASIPYSPDTLCALQPGLSLDAARA  635
             + ERR+G     R +V +V++Q+ DG  P     + ++P+  D+LC    GL+LD +R+
Sbjct  558  TIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETDSLCDPGEGLTLDQTRS  617

Query  636  QWFAGPDYGIAVGVVRNDGQRRLRFDEASCGSRWALATSAWPKVWLEPGEETEVFVVMKQ  695
            QWF   + G+AV V +N+ ++ +R+DE+ CG+RW ++ +AWP  W++PGEE+EV++ M+Q
Sbjct  618  QWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEESEVYIAMRQ  677

Query  696  P--TRTPGGERPSLLQTSA  712
            P  ++ +   RPSLL+ +A
Sbjct  678  PQLSKMAKESRPSLLRRTA  696

7) rscC in NC_012660


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  506 bits (1910),  Expect = 1e-144, Method: Compositional matrix adjust.
 Identities = 325/700 (47%), Positives = 495/700 (71%), Gaps = 29/700 (4%)

Query  27   WLVLLGCIMAPAHNLLAAIPAEWKNTAYAYEADHKPLREVLEDFAQTFGTQLQIEGLLEG  86
            WL LL   M P+    AAIP  WK+TAYAY+A +  L   L DFA+ FG  L++  +  G
Sbjct  7    WLPLLLIGMVPPT--WAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPI-SG  63

Query  87   DVNGKIRANTPQSMLDRLGVEHRFQWYLYNNTLFVSTLDQQESARLEVSSETISDLKQAL  146
             ++G+IRA+ PQ  L+RL+ E +FQW++YN+TL++S   ++ SAR+EVSS+++ DL+ AL
Sbjct  64   KLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTAL  123

Query  147  TDIGLLDSRFGWGELPEDGVVLVSGPKTYIDQIKQFSSKRRSAD--EKQSVLSFPLKFAN  204
            TD+GLLD RFGWG LP++GVVLV GP  Y+D ++++S K  S+D  EKQ V+ FPLK+AN
Sbjct  124  TDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYAN  183

Query  205  AADRKVDYRGEKLVVPGVANILRGLLEPRS-ASTLTGMSQPDSSQPSPLTPNVPRLGNPL  263
            AADR + YR+++L V+GVA+IL+ LL+ RS + ++ G++  + ++P+   ++    ++P 
Sbjct  184  AADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPN  243

Query  264  LGQMLGANG-NAGQLDTG----------PTVTPRAPVSKSRIRVEADVRNNAVLIYDLPE  312
            +   L+ANG ++G L+ G           +   +A  +++ IRV ADVRNNAVLIYDLP+
Sbjct  244  VPYNLSANGIDTGALQQGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPD  303

Query  313  RQAMYRDLITQLDVARKlieidaiildieRTQLREFGVNWGFQNSRFRGGVNM-APGTSS  371
            R+AMY  LI +LDV+R+LIEIDA+ILDI+R +L E++  W F++    GGVNM  +GT+S
Sbjct  304  RKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKS----GGVNMFDAGTTS  359

Query  372  QVSIENRDRFYADIRALEAKGLATMVSNPSVLTLENQPAVIDFNRTQYISPGRD-YATIL  430
             + I+N ++F A+++ALE++G A++++NPS+LTLENQPAVIDF+RT+YI++  +  A I 
Sbjct  360  TLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIE  419

Query  431  PVTVGTSLQVVPRVTTGRGVHQIHLVVDIEDGNFDETNPERDPNHPDVRRGKVSTQAVMQ  490
            P+T GTSLQV+PR     G  Q++L+VDIEDG++D +  + ++++P VR+G+VSTQAV+ 
Sbjct  420  PITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVS--DINADQPSVRKGNVSTQAVIA  477

Query  491  EKRSLVVGGFHVTDSSDQQKKIPLLGDIPLLGKTLFSSTERHNNRRERLFILTPRVIGDQ  550
            E  SLVVGGFH  +++D+  KIPLLGDIP +GK LF S  R+ N+RERLFILTPR+IGDQ
Sbjct  478  EHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQ  537

Query  551  DDPSRYLPQDDQAELQAALTPL-ARRYSPHQPVIKRSDIITTLARLVSGEVPKAFN-AAP  608
             +P+RY+ +++  +++A +  +  RR + + P   R+D+   ++++V G  P + + +  
Sbjct  538  VNPARYVQNGNPHDIDAQMKTIKERRDGGDLP--TRNDVQNVFTQMVDGVAPPGMHMGET  595

Query  609  MPLGLNTLCSTRDLLALNTERSQWYAGPDYNVAVVVLRNQFKRNVRIDEKECSNSQTLAV  668
            MP+  ++LC   + L+L+  RSQW+   +  VAVVV +N+ ++ VRIDE  C+    ++V
Sbjct  596  MPFETDSLCDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGV  655

Query  669  TVWPRAWLKPGEEAEVFIAMRPVVKDEHLSVPRPSLITPT  708
            T WP+AW++PGEE+EV+IAMR          +RPSL+  T
Sbjct  656  TAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRT  695

8) rscC in NC_017911


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  505 bits (1904),  Expect = 4e-144, Method: Compositional matrix adjust.
 Identities = 313/691 (46%), Positives = 488/691 (71%), Gaps = 28/691 (4%)

Query  34   LLVS-AQSALAAIPSEWKNTAYAYEAEHKPVREVLEDFAQTFGTQLQIEGLLEGIVNGKI  92
            LL++   ++ AAIP  WK+TAYAY+A +  +   L DFA+ FG  L++  +  G ++G+I
Sbjct  11   LLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPI-SGKLDGRI  69

Query  93   RANTPQSLLDRLGVEHRFQWYLYNNTLYVSTLDQQESARLEVSSETIADLKQALTDIGLL  152
            RA+ PQ +L+RL+ E +FQW++YN+TLY+S   ++ SAR+EVSS+++ DL+ ALTD+GLL
Sbjct  70   RAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLL  129

Query  153  DSRFGWGELPDDGIVLVSGPRRYIEQVKQFSSQRRSVD--EKQSVLSFPLKFANAADRHV  210
            D RFGWG LP++G+VLV GP +Y++ V+++S +  S D  EKQ V+ FPLK+ANAADR +
Sbjct  130  DKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTI  189

Query  211  DYRGQKITIAGVSSIVRGLLEPRSNATPPA----LAQ-RPASQPAPLVP-NVPRLSNPLL  264
             YR+Q++T+AGV+SI++ LL+ RS + +      L++ RP++  +     + P ++  L 
Sbjct  190  RYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLS  249

Query  265  GQMLATNSTPMPMD------IGATLTPRAPAPTSRIRVEADMRNNAVLIYDLPERQAMYR  318
            ++ + T +    +D         +   +A +  + IRV AD+RNNAVLIYDLP+R+AMY 
Sbjct  250  ANGIDTGALQQGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYE  309

Query  319  ELIAQLDVARKLVEIDTIILDIERTQLREFGVNWGFQNSRFRGGANM-APGTSQQLSIEN  377
             LI +LDV+R+L+EID++ILDI+R +L E++  W F++    GG NM  +GT+  L I+N
Sbjct  310  KLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKS----GGVNMFDAGTTSTLFIQN  365

Query  378  RDRFYADIRALEAKGLATMVSNPSVLTLENQPAVIDFNRTQYLTPGRQN-ATILPVTVGT  436
             ++F A+++ALE++G A++++NPS+LTLENQPAVIDF+RT+Y+T+  +  A I P+T GT
Sbjct  366  AGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGT  425

Query  437  SVQVVPRVITSRGSHQIHLVVDIEDGTFDESNPNRDLNNLDVRRGNVSTQAVMAEKRSMV  496
            S+QV+PR +   G  Q++L+VDIEDG +D S+ N D  +  VR+GNVSTQAV+AE  S+V
Sbjct  426  SLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPS--VRKGNVSTQAVIAEHGSLV  483

Query  497  VGGFHVTESTDKHNKVPLLGDIPLLGKALFssserqnnrrerLFIITPRVIGDQADPSRY  556
            VGGFH  E+ DK +K+PLLGDIP +GK LF S  R+ N+RERLFI+TPR+IGDQ +P+RY
Sbjct  484  VGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARY  543

Query  557  LPQADQAELQTALAPL-ARRNAPHQPEIKRSDIISTLAHLVTGEVPKAFKLA-PMPLGLN  614
            + +++  ++++ +  +  RR++ + P   R+D+ + ++++V G  P +  ++  MP+  +
Sbjct  544  VQNGNPHDIDAQMKTIKERRDGGDLP--TRNDVQNVFTQMVDGVAPPGMHMGETMPFETD  601

Query  615  TLCSPRDLLALNTERSQWYAGPEYNVAVVVMRNQFNRNVRIDEKECSNSQTLAVTVWPRA  674
            +LC P + L+L+  RSQW+      VAVVV +N+ N+ VRIDE  C+    ++VT WP+A
Sbjct  602  SLCDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHA  661

Query  675  WLKPGEEAEVFIAMRPVKKDEHLSVPRPTLI  705
            W++PGEE+EV+IAMR  +       +RP+L+
Sbjct  662  WVQPGEESEVYIAMRQPQLSKMAKESRPSLL  692

9) H045_00215 in NC_020209


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  504 bits (1902),  Expect = 5e-144, Method: Compositional matrix adjust.
 Identities = 313/675 (47%), Positives = 473/675 (71%), Gaps = 18/675 (2%)

Query  43   AAIPSDWKNTAYAYEAEHKPLRDVLEDFAQTFGTQLQIDGLLDGVVNGKIRANTPQSLLD  102
            AAIP  WK+TAYAY+A +  L   L DFA+ FG  L++  +  G ++G+IRA+ PQ +L+
Sbjct  21   AAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPI-SGKLDGRIRAENPQEFLE  79

Query  103  RLGVEHRFQWYLYNNTLYISTLDLQESARLEVSAETVADLKRALTDIGLLDSRFGWGELP  162
            RL+ E +FQW++YN+TLYIS    + SAR+EVS+++V DL+ ALTD+GLLD RFGWG LP
Sbjct  80   RLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLP  139

Query  163  DDGVVLVSGPKRYIDQIKQFSSQRKSAD--EKQSVLSYPLKFANAGDRQIDYRGEKIAIP  220
            ++GVVLV GP +Y+D ++++S +  S+D  EKQ V+ +PLK+ANA+DR I YR+++++++
Sbjct  140  NEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTIRYRDQQLTVA  199

Query  221  GVASMLRGLLEPRSPSTLSTMSPRPSASQPSPITPNYPRLNNPILG-QMLGQTANAGQLE  279
            GVAS+L+ LL+ RS +         + ++P+   ++    ++P +  ++ ++  ++G L+
Sbjct  200  GVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLSANGIDTGALQ  259

Query  280  TG----------ATLTPRAPVSAGRIRVEADVRNNAVLIYDLPERQAMYRELITQLDVAR  329
             G           +   +A  + + IRV ADVRNNAVLIYDLP+R+AMY  LI +LDV+R
Sbjct  260  QGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIKELDVPR  319

Query  330  KMVEIDAIILDIERSQLREFGVNWGNSRFSSDMRLAPGSSSQLSIENRDRFFAKIRALEQ  389
            +++EIDA+ILDI+R++L E++  W     + +M + +G++S L I+N ++F A ++ALE 
Sbjct  320  NLIEIDAVILDIDRNELAELASRWNFKSGGVNM-FDAGTTSTLFIQNAGKFSAELHALEG  378

Query  390  RGLATMVSNPSVLTLENQPSVIDFNRTQYLTAGTE-VATVLPITVGTSLQVVPRVITTRG  448
             G A++++NPS+LTLENQP+VIDF+RT+Y+TA +E VA + PIT GTSLQV+PR +   G
Sbjct  379  NGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIPRSLDHDG  438

Query  449  THQVHLLVDIEDGNFDESDPNRLGPDVRRGNVSTQAVMAEKRSLVVGGFHVTESIDKRNK  508
              QV+L+VDIEDG++D SD N   P VR+GNVSTQAV+AE  SLVVGGFH  E+ DK +K
Sbjct  439  KPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLEANDKVHK  498

Query  509  IPLLGDIPLLGKALFssserknnrrerLFILTPRVIGDQADPSRYLPQDDQAELQAALKP  568
            IPLLGDIP +GK LF S  R  N+RERLFILTPR+IGDQ +P+RY+ +++  +++A +K 
Sbjct  499  IPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHDIDAQMKT  558

Query  569  LARRYAEHAPVIKRSDITGTLANLVTGRVPLAF-KAAPMPLGLATLCSTRDLLAMNTERS  627
            +  R  + + +  R+D+   ++++V G  P +   +  MP+   +LC   + L+++  RS
Sbjct  559  IKER-RDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETDSLCDPGEGLTLDQTRS  617

Query  628  QWYAGPQFNVAVVVLRNQLKRNVRIDEKECSTSQTLAVTVWPRAWLKPGEEAEVFIAMRP  687
            QW+      VAVVV +N+ ++ VRIDE  C+    ++VT WP+AW++PGEE+EV+IAMR 
Sbjct  618  QWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEESEVYIAMRQ  677

Query  688  VVKDEHLSVPRPSLL  702
                     +RPSLL
Sbjct  678  PQLSKMAKESRPSLL  692

10) hrcC in NC_014500


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  492 bits (1857),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 305/692 (45%), Positives = 495/692 (72%), Gaps = 26/692 (3%)

Query  18   W-SLVLMGMLPIAHAATPPDWSKGAYAYSAEQTPLSAVLQDFANSHGVDLVLGNIQDINV  76
            W +L+L+GM+P + AA P  W   AYAY A +T LS+ L DFA+  G+ L ++ I + ++
Sbjct  7    WLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISG-KL  65

Query  77   EAKIRADNAVAFLDRLALEHRFQWFVYNNVLYVSPQDEQTSVRIEVSQDAAPDMKQALTG  136
            +++IRA+N+  FL+RLA E +FQWFVYN+ LY+SP  E+TS RIEVS DA  D++ ALT+
Sbjct  66   DGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTD  125

Query  137  IGLLDSRFGWGELPEEGVVLVTGPAEYVNLIRNFSQQRET--KEDRRKVMIFPLRYASVS  194
            +GLLD RFGWG LP+EGVVLV GPA YV+L+R++S++ ++  K +++ V++FPL+YA+ +
Sbjct  126  VGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAA  185

Query  195  DRTIQYRDQRLVIPGVATILNELMDGNRNTPagasaaasgmgndgamaaasgggqdasqa  254
            DRTI+YRDQ+L ++GVA+IL+EL+D      +  +    G G  G+  + +GG+++++ +
Sbjct  186  DRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVP  245

Query  255  IELNARAM--------LARLatrssggataaarkkDQLNGKVSADVRNNALLIRDDEKRR  306
             +L+A ++        L R+ + +S  +  +    ++ N +VSADVRNNA+LI D   R+
Sbjct  246  YNLSANGIDTGALQQGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRK  305

Query  307  DEYQQLIDKIDVPQNLVNIDAIILDVDRTALSRLEANWQGKLGAVTGGANMMSG--SSTL  364
              Y++LI  +DVP+NL++IDA+ILD+DR  L+ L + W+ K    +GG NM  +  +STL
Sbjct  306  AMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFK----SGGVNMFDAGTTSTL  361

Query  365  FVSDFKRFFADIQALEGEGTASIVANPSVLTLENQPAVIDFSRTAFITATGERVANVQPV  424
            F+ +  +F A+++ALEG+G+AS+++NPS+LTLENQPAVIDFSRT +ITAT+ERVAN++P+
Sbjct  362  FIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPI  421

Query  425  TAGTSLQVTPRVVGRGSLSSIQLVIDIEDGQVE-TNTEGTASGVKRGTVSTQALIGENRA  483
            TAGTSLQV PR +++++ + +QL++DIEDGQ++ ++ ++  ++V++G VSTQA+I+E+ +
Sbjct  422  TAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGS  481

Query  484  LVLGGFHVEESGDRDKRVPLLGDIPWIGK-LFTSRQHEVSRRERLFILTPHLIGDQNDPT  542
            LV+GGFH  E+ D+  ++PLLGDIP IGK LF SR +E+++RERLFILTP+LIGDQ +P+
Sbjct  482  LVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPA  541

Query  543  RFVSADNRRQLNDAMGRVAQRNSKTDLFS--VVESAMRELASGQTPAGFTIDGSGA-RLS  599
            R+V  +N ++++  M  + +R    DL +   V++   ++  G +P+G  ++ + +    
Sbjct  542  RYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETD  601

Query  600  EFCRTSPSLSYQSNRHQWYSNLTLSLAVGVVKNIGTRPQRFDEANCASSRTLAVAAWPKT  659
             +C  + +L+ +  R QW+ +   ++AV V  N   +P R+DE+ C++ + ++V+AWP +
Sbjct  602  SLCDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHA  661

Query  660  TLAPGESTEVYLALLP---AKNAQPSRASLIK  688
             + PGE +EVY+A+     +K A+ SR+SL++
Sbjct  662  WVQPGEESEVYIAMRQPQLSKMAKESRPSLLR  693

11) hrcC in NC_013971


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  484 bits (1826),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 296/685 (44%), Positives = 481/685 (71%), Gaps = 45/685 (6%)

Query  26   AQTPADWKEQSYAYSADRTPLSTVLQDFADGHSVDLHLGNVEDTEVTAKIRAENASAFLD  85
            A  P  WK+ +YAY A  T LST L DFA   ++ L+++ + +  + ++IRAEN+  FL+
Sbjct  21   AAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGK-LDGRIRAENPQEFLE  79

Query  86   RLALEHHFQWFVYNNTLYVSPQDEQSSERLEISPDAAPDIKQALSGIGLLDPRFGWGELP  145
            RLA E HFQWFVYN+TLY+SP  E++S R+E+S+DA  D++ AL+++GLLD RFGWG LP
Sbjct  80   RLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLP  139

Query  146  DDGVVLVTGPPQYLELVKRFSEQREK--KEDRRKVMTFPLRYASVADRTIHYRDQTVVIP  203
            ++GVVLV GP++Y++LV+ +S + +   K +++ V+ FPL+YA+ ADRTI+YRDQ + ++
Sbjct  140  NEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTIRYRDQQLTVA  199

Query  204  GVATMLNELMNGK-RAAPASASGI-----------------------DSTPGGPDTNSMM  239
            GVA++L+EL++ + R+ + ++  +                       + ++ G DT ++ 
Sbjct  200  GVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLSANGIDTGALQ  259

Query  240  QNTQTLLSRLSSRNKTSNRAGGRDNEIEDVSGRISADVRNNALLIRDDDKRHDEYSQLIA  299
            Q  + +LS  S ++  ++ +GGR N       R+SADVRNNA+LI D   R   Y +LI 
Sbjct  260  QGLDRVLSYGSKKSGKGKAGGGRANI------RVSADVRNNAVLIYDLPDRKAMYEKLIK  313

Query  300  KIDVPQNLVEIDAVILDIDRTALNRLEANWQAtlggvtggsslmsgsgtlFVSDFKRFFA  359
             +DVP+NL+EIDAVILDIDR  L  L + W+  + +        + ++TLF+ +  +F A
Sbjct  314  ELDVPRNLIEIDAVILDIDRNELAELASRWN--FKSGGVNMFDAGTTSTLFIQNAGKFSA  371

Query  360  DIQALEGEGTASIVANPSVLTLENQPAVIDFSQTAYITATGERVADIQPVTAGTSLQVTP  419
            +++ALEG+G+AS+++NPS+LTLENQPAVIDFS+T YITAT+ERVA+I+P+TAGTSLQV P
Sbjct  372  ELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIP  431

Query  420  RAVGNEGHSSIQLMIDIEDGHVQTNG-DGQATGVKRGTVSTQALISENRALVLGGFHVEE  478
            R+++++G + +QL++DIEDG+++ ++ +++  +V++G VSTQA+I+E+ +LV+GGFH  E
Sbjct  432  RSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLE  491

Query  479  SADRDRRIPLLGDIPWLGQ-LFSSKRHEISQRQRLFILTPRLIGDQTDPTRYVTADNRQQ  537
            + D+ ++IPLLGDIP +G+ LF S+ +EI++R+RLFILTPRLIGDQ +P+RYV  +N ++
Sbjct  492  ANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHD  551

Query  538  LSDAMGRV-ERRHSS-VNQHDVVENALRDLAEGQSPAGFQ-PQTSGTRLSEVCRSTPALL  594
            +   M  + ERR+++ +  ++ V+N + ++ +G +P+G +  +T       +C +  +L 
Sbjct  552  IDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETDSLCDPGEGLT  611

Query  595  FESTRGQWYSSSTNGVQLSVGVVRNTSSKPLRFDEANCASKRTLAVAVWPHSALAPGESA  654
            ++ TR+QW+     GV  +V V +N ++KP+R+DE+ C++++ ++V+ WPH+ + PGE +
Sbjct  612  LDQTRSQWFVQKGWGV--AVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEES  669

Query  655  EVYLAM---DPSRVLHASRESLLNR  676
            EVY+AM   + S++   SR SLL R
Sbjct  670  EVYIAMRQPQLSKMAKESRPSLLRR  694

12) hrcC in NC_013961


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  484 bits (1826),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 296/685 (44%), Positives = 481/685 (71%), Gaps = 45/685 (6%)

Query  26   AQTPADWKEQSYAYSADRTPLSTVLQDFADGHSVDLHLGNVEDTEVTAKIRAENASAFLD  85
            A  P  WK+ +YAY A  T LST L DFA   ++ L+++ + +  + ++IRAEN+  FL+
Sbjct  21   AAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGK-LDGRIRAENPQEFLE  79

Query  86   RLALEHHFQWFVYNNTLYVSPQDEQSSERLEISPDAAPDIKQALSGIGLLDPRFGWGELP  145
            RLA E HFQWFVYN+TLY+SP  E++S R+E+S+DA  D++ AL+++GLLD RFGWG LP
Sbjct  80   RLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLP  139

Query  146  DDGVVLVTGPPQYLELVKRFSEQREK--KEDRRKVMTFPLRYASVADRTIHYRDQTVVIP  203
            ++GVVLV GP++Y++LV+ +S + +   K +++ V+ FPL+YA+ ADRTI+YRDQ + ++
Sbjct  140  NEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTIRYRDQQLTVA  199

Query  204  GVATMLNELMNGK-RAAPASASGI-----------------------DSTPGGPDTNSMM  239
            GVA++L+EL++ + R+ + ++  +                       + ++ G DT ++ 
Sbjct  200  GVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLSANGIDTGALQ  259

Query  240  QNTQTLLSRLSSRNKTSNRAGGRDNEIEDVSGRISADVRNNALLIRDDDKRHDEYSQLIA  299
            Q  + +LS  S ++  ++ +GGR N       R+SADVRNNA+LI D   R   Y +LI 
Sbjct  260  QGLDRVLSYGSKKSGKGKAGGGRANI------RVSADVRNNAVLIYDLPDRKAMYEKLIK  313

Query  300  KIDVPQNLVEIDAVILDIDRTALNRLEANWQAtlggvtggsslmsgsgtlFVSDFKRFFA  359
             +DVP+NL+EIDAVILDIDR  L  L + W+  + +        + ++TLF+ +  +F A
Sbjct  314  ELDVPRNLIEIDAVILDIDRNELAELASRWN--FKSGGVNMFDAGTTSTLFIQNAGKFSA  371

Query  360  DIQALEGEGTASIVANPSVLTLENQPAVIDFSQTAYITATGERVADIQPVTAGTSLQVTP  419
            +++ALEG+G+AS+++NPS+LTLENQPAVIDFS+T YITAT+ERVA+I+P+TAGTSLQV P
Sbjct  372  ELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIP  431

Query  420  RAVGNEGHSSIQLMIDIEDGHVQTNG-DGQATGVKRGTVSTQALISENRALVLGGFHVEE  478
            R+++++G + +QL++DIEDG+++ ++ +++  +V++G VSTQA+I+E+ +LV+GGFH  E
Sbjct  432  RSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLE  491

Query  479  SADRDRRIPLLGDIPWLGQ-LFSSKRHEISQRQRLFILTPRLIGDQTDPTRYVTADNRQQ  537
            + D+ ++IPLLGDIP +G+ LF S+ +EI++R+RLFILTPRLIGDQ +P+RYV  +N ++
Sbjct  492  ANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHD  551

Query  538  LSDAMGRV-ERRHSS-VNQHDVVENALRDLAEGQSPAGFQ-PQTSGTRLSEVCRSTPALL  594
            +   M  + ERR+++ +  ++ V+N + ++ +G +P+G +  +T       +C +  +L 
Sbjct  552  IDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETDSLCDPGEGLT  611

Query  595  FESTRGQWYSSSTNGVQLSVGVVRNTSSKPLRFDEANCASKRTLAVAVWPHSALAPGESA  654
            ++ TR+QW+     GV  +V V +N ++KP+R+DE+ C++++ ++V+ WPH+ + PGE +
Sbjct  612  LDQTRSQWFVQKGWGV--AVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEES  669

Query  655  EVYLAM---DPSRVLHASRESLLNR  676
            EVY+AM   + S++   SR SLL R
Sbjct  670  EVYIAMRQPQLSKMAKESRPSLLRR  694

13) hrcC in NC_004547


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  471 bits (1775),  Expect = 5e-134, Method: Compositional matrix adjust.
 Identities = 290/698 (42%), Positives = 493/698 (71%), Gaps = 46/698 (6%)

Query  23   W-AIVLIGIIPVNGVISLAYAATPADWNKGAYAYSAEQTPLSAILADFANSHGVDLVLGN  81
            W +++LIG++P       + AA P  W+  AYAY A +T LS+ L+DFA+  G+ L ++ 
Sbjct  7    WLPLLLIGMVPP------TWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAP  60

Query  82   IADNEVTAKIRADNPTLFLDRLALEHRFQWFVYNNALYVSPQDEQASVRLEISPDAAPDI  141
            I+++ + ++IRA+NP  FL+RLA E +FQWFVYN++LY+SP  E++S R+E+S+DA  D+
Sbjct  61   ISGK-LDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDL  119

Query  142  KQALSGIGLIDSRFGWGELPEEGVVLVTGPKAYIDLIRNFSQQREKQD--ERRKVMIFPL  199
            + AL+++GL+D RFGWG LP+EGVVLV GP  Y+DL+R++S++ +  D  E++ V++FPL
Sbjct  120  QTALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPL  179

Query  200  RYASVSDRTLQYRDQKITIPGVATILNELMDGQ---------------RAAPAGASGPMP  244
            +YA+ +DRT++YRDQ++T++GVA+IL+EL+D +               R++ + + G  +
Sbjct  180  KYANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGS  239

Query  245  VQPDT--GMEAMRDSTRSL---MTRLATRTSPGRSGEASSRVTLSGKISADVRNNALLIR  299
             +P+    + A    T +L   + R+ +  S   +   ++    + ++SADVRNNA+LI 
Sbjct  240  DEPNVPYNLSANGIDTGALQQGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIY  299

Query  300  DDEKRRAEYQQLVEHIDVPQNLVNIDAIILDVDRTALSRLEANWQAQLGNVS---AGSTM  356
            D   R+A Y++L+ ++DVP+NL++IDA+ILD+DR  L+ L + W+ + G V+   AG+T 
Sbjct  300  DLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGVNMFDAGTT-  358

Query  357  MMGRSTLFVSDFKRFFADIQALEGEGTASIVANPSVLTLENQPAIVDFSRTAFITATGER  416
                STLF+ +  +F A+++ALEG+G+AS+++NPS+LTLENQPA++DFSRT +ITAT+ER
Sbjct  359  ----STLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSER  414

Query  417  VADIQPVTAGTSLQVTPRVIGEGAQRSIQLVIDIEDGQVETGR-EGEASGVKRGTVSTQA  475
            VA+I+P+TAGTSLQV PR ++++++  +QL++DIEDGQ++ +  +++ ++V++G VSTQA
Sbjct  415  VANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQA  474

Query  476  LIGENRALVLGGFHVEESGDRDRRIPILGDIPLLGK-LFTSTRHEVSRRERLFILTPHLV  534
            +I+E+ +LV+GGFH  E+ D+ ++IP+LGDIP +GK LF S  +E+++RERLFILTP+L+
Sbjct  475  VIAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLI  534

Query  535  GDQTDPTRYVSSVNRQQLNGAMNRVAQRNGKTDLYSL--IEGAFRDLASRQLPAGFQ-AD  591
            GDQ +P+RYV + N +++++ M+ + +R +  DL +   ++  F ++     P+G + ++
Sbjct  535  GDQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGE  594

Query  592  SKGARLGEVCRSQSGLIYDSSRYQWYGNGQVRLSVGVVRNGGTQPQRFDEAACASSRTLA  651
            +     + +C +  GL  D +R QW+ +    ++V V +N   +P R+DE+ C++ + ++
Sbjct  595  TMPFETDSLCDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIG  654

Query  652  VAVWPKTTLAPGESSEVFLAL-QPALT--AQPTRRNVL  686
            V+ WP + + PGE SEV++A+ QP L+  A+ +R ++L
Sbjct  655  VTAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLL  692

14) PC1_2192 in NC_012917


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  466 bits (1758),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 283/677 (42%), Positives = 479/677 (71%), Gaps = 37/677 (5%)

Query  33   MNGVISLAHAATPADWNKGAYAYSAEQTPLSAILTDFANSHGVDLVLGNIADNDVTAKIR  92
            + G+++ + AA P  W+  AYAY A +T LS+ L+DFA+  G+ L ++ I+++ + ++IR
Sbjct  12   LIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGK-LDGRIR  70

Query  93   AETPVLFLDRLALEHRFQWFVYNNALYVSPQDEQASVRLEISPDAAPDIKQALSGIGLLD  152
            AE P  FL+RLA E +FQWFVYN++LY+SP  E++S R+E+S+DA  D++ AL+++GLLD
Sbjct  71   AENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLD  130

Query  153  ARFGWGELPEEGVVLVTGPQAYIDLIRNFSQQREKQD--ERRKVMIFPLRYASVSDRTLQ  210
             RFGWG LP+EGVVLV GP  Y+DL+R++S++ +  D  E++ V++FPL+YA+ +DRT++
Sbjct  131  KRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTIR  190

Query  211  YRDQKVTIPGVATILNELMDGQ---------------RAAPAGASGPMPVQPDT--GMEA  253
            YRDQ++T++GVA+IL+EL+D +               R++ + + G  + +P+    + A
Sbjct  191  YRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLSA  250

Query  254  MRDSTRSL---MTRLATRNNPGRSGDASSRVTLSGKISADVRNNALLIRDDEKRRAEYQQ  310
                T +L   + R+ +  +   + + ++    + ++SADVRNNA+LI D   R+A Y++
Sbjct  251  NGIDTGALQQGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEK  310

Query  311  LVDHIDVPQNLVNIDAIILDVDRTALSRLEANWQAQLGNVS---AGSTMMMGRSTLFVSD  367
            L+ ++DVP+NL++IDA+ILD+DR  L+ L + W+ + G V+   AG+T     STLF+ +
Sbjct  311  LIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGVNMFDAGTT-----STLFIQN  365

Query  368  FKRFFADIQALEGEGTASIVANPSVLTLENQPAIVDFSRTAFITATGERVADIQPVTAGT  427
              +F A+++ALEG+G+AS+++NPS+LTLENQPA++DFSRT +ITAT+ERVA+I+P+TAGT
Sbjct  366  AGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGT  425

Query  428  SLQVTPRVVGEGAQRSIQLVIDIEDGQVETGR-EGEASGVKRGTVSTQALIGENRALVLG  486
            SLQV PR ++++++  +QL++DIEDGQ++ +  +++ ++V++G VSTQA+I+E+ +LV+G
Sbjct  426  SLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVG  485

Query  487  GFHVEESGDRDRRIPILGDIPLLGK-LFTSTRHEVSRRERLFILTPHLVGDQTDPTRYVS  545
            GFH  E+ D+ ++IP+LGDIP +GK LF S  +E+++RERLFILTP+L+GDQ +P+RYV 
Sbjct  486  GFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQ  545

Query  546  SANRQQLNGAMNRVAQRNGKTDLYSL--IEGAFRDLASRQLPAGFKTVSNGA-RLGEVCR  602
            ++N +++++ M+ + +R +  DL +   ++  F ++     P+G       +   + +C 
Sbjct  546  NGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETDSLCD  605

Query  603  SQSGLIYDSSRYQWYDNGQVRLSVGVVRNGGTQPQRFDEAACASSRTLAVAVWPKTTLAP  662
            +  GL  D +R QW+ +    ++V V +N   +P R+DE+ C++ + ++V+ WP + + P
Sbjct  606  PGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQP  665

Query  663  GESSEVFLAL-QPALAS  678
            GE SEV++A+ QP L+ 
Sbjct  666  GEESEVYIAMRQPQLSK  682

15) PCC21_022700 in NC_018525


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  465 bits (1753),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 285/689 (42%), Positives = 493/689 (72%), Gaps = 47/689 (6%)

Query  35   GMLSLAHAATPADWNKGAYAYSAEQTPLSAILTDFANSHGVDLVLGNIADNEVTAKIRAD  94
            GM++ + AA P  W+  AYAY A +T LS+ L+DFA+  G+ L ++ I+++ + ++IRA+
Sbjct  14   GMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGK-LDGRIRAE  72

Query  95   NPTLFLDRLALEHRFQWFVYNNALYVSSQDEQASVRLEISPDAAPDIKQALSGIGLLDAR  154
            NP  FL+RLA E +FQWFVYN++LY+S+  E++S R+E+S+DA  D++ AL+++GLLD R
Sbjct  73   NPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKR  132

Query  155  FGWGELPEEGVVLVTGPQAYIDLIRNFSQQREKQD--ERRKVMIFPLRYASVSDRTLQYR  212
            FGWG LP+EGVVLV GP  Y+DL+R++S++ +  D  E++ V++FPL+YA+ +DRT++YR
Sbjct  133  FGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFPLKYANAADRTIRYR  192

Query  213  DQKVTIPGVATILNELMDGQ---------------RAAPAGASGPMPVQPD-------NG  250
            DQ++T++GVA+IL+EL+D +               R++ + + G  + +P+       NG
Sbjct  193  DQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGRPGGGFSEGGGSDEPNVPYNLSANG  252

Query  251  ME--AMRESTRSLMTRLATRNNPGRNGEASGRVTLSGKISADVRNNALLIRDDEKRRAEY  308
            ++  A++++   +++  + ++  G+ G + + + +S    ADVRNNA+LI D   R+A Y
Sbjct  253  IDTGALQQGLDRVLSYGSKKSGKGKAGGGRANIRVS----ADVRNNAVLIYDLPDRKAMY  308

Query  309  QQLVDHIDVPQNLVNIDAIILDVDRTALSRLEANWQAQLGNVS---AGSTMMMGRSTLFV  365
            ++L+ ++DVP+NL++IDA+ILD+DR  L+ L + W+ + G V+   AG+T     STLF+
Sbjct  309  EKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGVNMFDAGTT-----STLFI  363

Query  366  SDFKRFFADIQALEGEGTASIVANPSVLTLENQPAIVDFSRTAFITATGERVADIQPVTA  425
             +  +F A+++ALEG+G+AS+++NPS+LTLENQPA++DFSRT +ITAT+ERVA+I+P+TA
Sbjct  364  QNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITA  423

Query  426  GTSLQVTPRVIGEGAQRSIQLVIDIEDGQVETGR-EGEASGVKRGTVSTQALIGENRALV  484
            GTSLQV PR ++++++  +QL++DIEDGQ++ +  +++ ++V++G VSTQA+I+E+ +LV
Sbjct  424  GTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLV  483

Query  485  LGGFHVEESGDRDRRIPILGDIPLLGQ-LFTSTRHEVSRRERLFILTPHLVGDQTDPTRY  543
            +GGFH  E+ D+ ++IP+LGDIP +G+ LF S  +E+++RERLFILTP+L+GDQ +P+RY
Sbjct  484  VGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARY  543

Query  544  VSSANRQQLNGAMNRVAQRNGKTDLYSL--IEGAFRDLASRQLPAGFQ-ADGKGTRLGEV  600
            V ++N +++++ M+ + +R +  DL +   ++  F ++     P+G + ++      + +
Sbjct  544  VQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHMGETMPFETDSL  603

Query  601  CRSQSGLIYDSSRYQWYSNGQVRLSVGVVRNGGTQAQRFDEAACASNRTLAVAVWPKTTL  660
            C +  GL  D +R QW+ +    ++V V +N   ++ R+DE+ C++ + ++V+ WP + +
Sbjct  604  CDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWV  663

Query  661  APGESSEVFLAL-QPALT--PQPARRNLL  686
             PGE SEV++A+ QP L+  ++ +R +LL
Sbjct  664  QPGEESEVYIAMRQPQLSKMAKESRPSLL  692

16) Marme_1063 in NC_015276


> AY597278|28|G28|51103060|AAT96206.1|Pseudomonas_viridiflava_PNA3.3a|-|24446..26539|hrcC|-|HrcC
Length=697

 Score =  439 bits (1653),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 282/701 (41%), Positives = 469/701 (67%), Gaps = 36/701 (5%)

Query  22   GLLRLLFKACLLSLMFCSYSFAAFPPEWKKTAFAFEANQTSLRKTLASFCNTFGVSLSIS  81
            +L++L     LL +   + + AA+P  WK TA+A++A +T L  +L+ F + FG++L ++
Sbjct  4    ALMWL----PLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMA  59

Query  82   NKLSGTVDGKLKSNSAQDFLNRLAIEHKFLWFVYNGTLYVSPLKEQTSELLDVSEDAVPD  141
              +SG +DG+++++++Q+FL+RLA E  F WFVYN+TLY+SP  E+TS  ++VS DAV D
Sbjct  60   P-ISGKLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDD  118

Query  142  LKNALTQIGLLDDRFGWGELPDEGTVIVSGPKRYVKFVRSLSRkkkkgd--ekkeVMVFP  199
            L+ ALT++GLLD RFGWG LP+EG V+V GP +YV +VR  S+K    D  EK++V+VFP
Sbjct  119  LQTALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFP  178

Query  200  LKYALADDRSINYRNKSINIPGVASMLSNLLGGGKKAPLAIDTMDFKSPAQSMEAFSAMQ  259
            LKYA A DR+I YR++ + ++GVAS+L +LL+   ++  +I+ +++ + +++  +FS   
Sbjct  179  LKYANAADRTIRYRDQQLTVAGVASILQELLDTRSRGD-SINGVNLLGHGRPGGGFSEGG  237

Query  260  ENSISRINNRIADRYATPSEINAKLS---------------DNSKVNSTISADTRNNAIL  304
             +  + +   ++      + ++  L                + ++ N  +SAD RNNA+L
Sbjct  238  GSDEPNVPYNLSANGIDTGALQQGLDRVLSYGSKKSGKGKAGGGRANIRVSADVRNNAVL  297

Query  305  IRDDYERKEMYEDLIAQLDQPRHVIEIDAIILDIDREKLSELGFNWQGGSGNTEAKINTS  364
            I D  +RK MYE LI +LD PR++IEIDA+ILDIDR+ L+EL+  W         +++++
Sbjct  298  IYDLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRW---------NFKSG  348

Query  365  GADPFLKSGSSATVTIQDFDHFFAQIRALETDGDASLVANPSILTIENQPAIIDFNNTAF  424
            G + F  +G+++T+ IQ+ + F A+++ALE +G AS+++NPSILT+ENQPA+IDF+ T +
Sbjct  349  GVNMF-DAGTTSTLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEY  407

Query  425  IKSTGERVANVSEITAGTSLQVLPRLIDSEAERVIQLFLDIEDGDIE-SNSGADTPSVSK  483
            I +T+ERVAN+  ITAGTSLQV+PR +D ++   +QL++DIEDG+I+ S+  AD PSV K
Sbjct  408  ITATSERVANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRK  467

Query  484  GSISTQAVIKTERSLVIGGFKVEQNTQRESKVPLLGDLPGIGK-LFSYTSKAHSKRERLF  542
            G++STQAVI  + SLV+GGF   +  ++  K+PLLGD+P IGK LF   S+  + RERLF
Sbjct  468  GNVSTQAVIAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLF  527

Query  543  IITPRLVGNESNPLQYVSKGDQEMLAEALESQKDKHARDFLKITRAQVGRAFEELINLYI  602
            I+TPRL+G++ NP +YV +G+ + +   + + K+++  + L  TR +V   F ++++   
Sbjct  528  ILTPRLIGDQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLP-TRNDVQNVFTQMVDGVA  586

Query  603  PNGFSLQTSAPYGIEYYCSPSEHFKINTKKLQWYNSEDYSILVGKIRNESPHPNRFDESS  662
            P G  +  + P+  +  C P+E + ++  + QW+   + ++ V   +N++  P R+DES 
Sbjct  587  PPGMHMGETMPFETDSLCDPGEGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESR  646

Query  663  CSHKDTIAVSVRPDTMLKPWESVEVLLAVRLPNKNKKQRNS  703
            C+ +  I+V+ +P++ ++P E  EV +A+R P+ +K  ++S
Sbjct  647  CGGRWVIGVTAWPHAWVQPGEESEVYIAMRQPQLSKMAKES  687