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Homologs of aec57 gene of AY857617

11

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YPZ3_0921
( YP_003567093.1 )

transposase

NC_014029
(Yersinia pestis Z176003)

2e-57

100

2) ECP_2704
( YP_670594.1 )

transposase

NC_008253
(Escherichia coli 536)

2e-49

97

3) SFxv_4862
( YP_005711911.1 )

IS100 ORF1

NC_017319
(Shigella flexneri 2002017)

3e-49

94

4) CP0027
( NP_858160.2 )

IS100 ORF1

NC_004851
(Shigella flexneri 301)

4e-49

94

5) SbBS512_A0143
( YP_001883174.1 )

transposase

NC_010660
(Shigella boydii CDC 3083-94)

2e-45

96

6) RF_0051
( YP_246067.1 )

transposase

NC_007109
(Rickettsia felis URRWXCal2)

2e-18

42

7) RF_0307
( YP_246323.1 )

transposase

NC_007109
(Rickettsia felis URRWXCal2)

2e-18

42

8) RF_0343
( YP_246359.1 )

transposase

NC_007109
(Rickettsia felis URRWXCal2)

2e-18

42

9) RF_0389
( YP_246405.1 )

transposase

NC_007109
(Rickettsia felis URRWXCal2)

2e-18

42

10) RF_0436
( YP_246452.1 )

transposase

NC_007109
(Rickettsia felis URRWXCal2)

2e-18

42

11) RF_0976
( YP_246992.1 )

transposase

NC_007109
(Rickettsia felis URRWXCal2)

2e-18

42

• Sequence Alignments

1) YPZ3_0921 in NC_014029


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score =  214 bits (798),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)

Query  35   GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  94
            GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV
Sbjct  8    GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  67

Query  95   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSF  154
            ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSF
Sbjct  68   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSF  127

Query  155  CRGVA  159
            CRGVA
Sbjct  128  CRGVA  132

2) ECP_2704 in NC_008253


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score =  187 bits (695),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 110/114 (97%), Positives = 112/114 (99%), Gaps = 0/114 (0%)

Query  5    TQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQA  64
            +QTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQA
Sbjct  19   AQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQA  78

Query  65   RPCDRWLEEQQSMLALPPEKKEYDVHPSENLVNFDKHPLHHPLSMYDSFCRGVA  118
            RPCDRWLEEQQSMLALPPEKKEYDVH  ENLVNFDKHPLHHPLS+YDSFCRGVA
Sbjct  79   RPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA  132

3) SFxv_4862 in NC_017319


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score =  187 bits (695),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 110/118 (94%), Positives = 114/118 (97%), Gaps = 0/118 (0%)

Query  12   QPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDVANQRKHE  71
            +PFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMG TVDVETANRHGLRWLHDVANQRKHE
Sbjct  15   RPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHE  74

Query  72   TIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVSFDNPPQHHPLSIYDSFCRGVA  129
            TIQARPCDRWLEEQQSMLALPPEKKEYDVH +ENLV+FD+ P HHPLSIYDSFCRGVA
Sbjct  75   TIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA  132

4) CP0027 in NC_004851


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score =  187 bits (693),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 110/118 (94%), Positives = 114/118 (97%), Gaps = 0/118 (0%)

Query  26   QPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDVANQRKHE  85
            +PFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMG TVDVETANRHGLRWLHDVANQRKHE
Sbjct  15   RPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHE  74

Query  86   TIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVSFDNPPQHHPLSIYDSFCRGVA  143
            TIQARPCDRWLEEQQSMLALPPEKKEYDVH +ENLV+FD+ P HHPLSIYDSFCRGVA
Sbjct  75   TIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA  132

5) SbBS512_A0143 in NC_010660


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score =  174 bits (645),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 102/107 (96%), Positives = 105/107 (99%), Gaps = 0/107 (0%)

Query  27   GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDV  86
            GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMG TVDVETANRHGLRWLHDV
Sbjct  8    GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  67

Query  87   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVSFDN  133
            ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVH +ENLV+FD+
Sbjct  68   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDK  114

6) RF_0051 in NC_007109


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score = 85.2 bits (304),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 80/123 (66%), Gaps = 4/123 (3%)

Query  20   SFRLKVCRPYRAQTKGKVERFNRYIRESFYNPLVTKLKTSELVLDVDTANSEVLKWLRDT  79
            +F  ++CRP+RAQTKGKVER  +Y R+SFY PL+T+L+   + +DV+TAN + L+WL+D 
Sbjct  8    GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  67

Query  80   ANLRVHRTTGAIPAERLKLERNHLQPLPLDYSGSHPTVLEIMRDKGERFSTVSLQHSLCI  139
            AN R H T  A P +R   E++ + +LP +    +  + E + +    F   +L+H+L I
Sbjct  68   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVN----FDKHPLHHPLSI  123

Query  140  YQS  142
            Y+S
Sbjct  124  YDS  126

7) RF_0307 in NC_007109


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score = 85.2 bits (304),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 80/123 (66%), Gaps = 4/123 (3%)

Query  20   SFRLKVCRPYRAQTKGKVERFNRYIRESFYNPLVTKLKTSELVLDVDTANSEVLKWLRDT  79
            +F  ++CRP+RAQTKGKVER  +Y R+SFY PL+T+L+   + +DV+TAN + L+WL+D 
Sbjct  8    GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  67

Query  80   ANLRVHRTTGAIPAERLKLERNHLQPLPLDYSGSHPTVLEIMRDKGERFSTVSLQHSLCI  139
            AN R H T  A P +R   E++ + +LP +    +  + E + +    F   +L+H+L I
Sbjct  68   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVN----FDKHPLHHPLSI  123

Query  140  YQS  142
            Y+S
Sbjct  124  YDS  126

8) RF_0343 in NC_007109


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score = 85.2 bits (304),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 80/123 (66%), Gaps = 4/123 (3%)

Query  20   SFRLKVCRPYRAQTKGKVERFNRYIRESFYNPLVTKLKTSELVLDVDTANSEVLKWLRDT  79
            +F  ++CRP+RAQTKGKVER  +Y R+SFY PL+T+L+   + +DV+TAN + L+WL+D 
Sbjct  8    GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  67

Query  80   ANLRVHRTTGAIPAERLKLERNHLQPLPLDYSGSHPTVLEIMRDKGERFSTVSLQHSLCI  139
            AN R H T  A P +R   E++ + +LP +    +  + E + +    F   +L+H+L I
Sbjct  68   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVN----FDKHPLHHPLSI  123

Query  140  YQS  142
            Y+S
Sbjct  124  YDS  126

9) RF_0389 in NC_007109


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score = 85.2 bits (304),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 80/123 (66%), Gaps = 4/123 (3%)

Query  20   SFRLKVCRPYRAQTKGKVERFNRYIRESFYNPLVTKLKTSELVLDVDTANSEVLKWLRDT  79
            +F  ++CRP+RAQTKGKVER  +Y R+SFY PL+T+L+   + +DV+TAN + L+WL+D 
Sbjct  8    GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  67

Query  80   ANLRVHRTTGAIPAERLKLERNHLQPLPLDYSGSHPTVLEIMRDKGERFSTVSLQHSLCI  139
            AN R H T  A P +R   E++ + +LP +    +  + E + +    F   +L+H+L I
Sbjct  68   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVN----FDKHPLHHPLSI  123

Query  140  YQS  142
            Y+S
Sbjct  124  YDS  126

10) RF_0436 in NC_007109


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score = 85.2 bits (304),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 80/123 (66%), Gaps = 4/123 (3%)

Query  20   SFRLKVCRPYRAQTKGKVERFNRYIRESFYNPLVTKLKTSELVLDVDTANSEVLKWLRDT  79
            +F  ++CRP+RAQTKGKVER  +Y R+SFY PL+T+L+   + +DV+TAN + L+WL+D 
Sbjct  8    GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  67

Query  80   ANLRVHRTTGAIPAERLKLERNHLQPLPLDYSGSHPTVLEIMRDKGERFSTVSLQHSLCI  139
            AN R H T  A P +R   E++ + +LP +    +  + E + +    F   +L+H+L I
Sbjct  68   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVN----FDKHPLHHPLSI  123

Query  140  YQS  142
            Y+S
Sbjct  124  YDS  126

11) RF_0976 in NC_007109


> AY857617|29|G25|57545649|AAW51740.1|Escherichia_coli_BEN2908|+|27544..27942|-|aec57|Aec57
Length=132

 Score = 85.2 bits (304),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 80/123 (66%), Gaps = 4/123 (3%)

Query  20   SFRLKVCRPYRAQTKGKVERFNRYIRESFYNPLVTKLKTSELVLDVDTANSEVLKWLRDT  79
            +F  ++CRP+RAQTKGKVER  +Y R+SFY PL+T+L+   + +DV+TAN + L+WL+D 
Sbjct  8    GFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDV  67

Query  80   ANLRVHRTTGAIPAERLKLERNHLQPLPLDYSGSHPTVLEIMRDKGERFSTVSLQHSLCI  139
            AN R H T  A P +R   E++ + +LP +    +  + E + +    F   +L+H+L I
Sbjct  68   ANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVN----FDKHPLHHPLSI  123

Query  140  YQS  142
            Y+S
Sbjct  124  YDS  126