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Homologs of eae gene of NC_013364_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) eae
( YP_003236079.1 )

theta intimin

NC_013364
(Escherichia coli 11128)

0.0

100

2) ECH74115_5054
( YP_002273158.1 )

intimin C-type lectin domain-containing protein

NC_011353
(Escherichia coli EC4115)

0.0

3) eae
( NP_290259.1 )

intimin adherence protein

NC_002655
(Escherichia coli EDL933)

0.0

4) ECs4559
( NP_312586.1 )

gamma intimin

NC_002695
(Escherichia coli Sakai)

0.0

5) eae
( YP_003080471.1 )

intimin adherence protein

NC_013008
(Escherichia coli TW14359)

0.0

6) CDCO157_4293
( YP_006315159.1 )

gamma intimin

NC_017906
(Escherichia coli Xuzhou21)

0.0

7) eae
( YP_003501865.1 )

Gamma intimin

NC_013941
(Escherichia coli CB9615)

0.0

8) ECO55CA74_21185
( YP_006161342.1 )

Gamma intimin

NC_017656
(Escherichia coli RM12579)

0.0

9) eaeA
( YP_002331401.1 )

intimin EaeA

NC_011601
(Escherichia coli E2348/69)

0.0

10) eae
( YP_003366493.1 )

intimin

NC_013716
(Citrobacter rodentium ICC168)

0.0

11) eae
( YP_003232162.1 )

intimin

NC_013361
(Escherichia coli 11368)

0.0

12) eae
( YP_003223466.1 )

intimin epsilon

NC_013353
(Escherichia coli 12009)

0.0

• Sequence Alignments

1) eae in NC_013364


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1380 bits (5236),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 935/935 (100%), Positives = 935/935 (100%), Gaps = 0/935 (0%)

Query  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60
            MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   DRLFYTLKTGETVssisksqgislsVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120
            DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YGalpvlgsapvvaaggvagHTNKMTKMSPDATQSNMTDDKALNYTaqqaaslgsqlqsr  180
            YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600
            NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660
            VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720
            TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780
            RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ
Sbjct  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780

Query  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840
            YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP
Sbjct  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840

Query  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900
            NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE
Sbjct  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900

Query  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935
            ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE
Sbjct  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935

2) ECH74115_5054 in NC_011353


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1280 bits (4858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 835/935 (90%), Positives = 901/935 (97%), Gaps = 1/935 (0%)

Query  1    MITHGCYtrtrhkhklkktlIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHDSYQ  60
            MITHG Y+RTRHKHKLKKT+IMLSAGLGLFFYVNQNSFANGENYFKL+SDSKLLT++  Q
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE  120
            +RLFYTLKTGETV+ +SKSQ+I+LS IWSLNKHLYSSESEM+KAAPGQQIILPLKKL+ E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALP+LGSAP+VAAGGVAGHTNK+TKMSPD T+SNMTDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SL+GDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLP NMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKL+YEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDK+WSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI  600
            NVQLTITVLSNGQVVDQVGVTDFTADKTSAKAD +++ITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSAKTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFFDQTKASI  660
            VSGTATLGANSA TDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIF +QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGKDAIKYTVKVMKNGQPVNNQSVTFSTNFGMFNGKSQTQ-ATTGNDG  719
            TEIKADKTTAVANG+DA+ YTVKVMK+GQPV+ +SV+F+TNFGMFNGKSQTQ ATTG+DG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  720  RATITLTSSSAGKATVSATVSDGAEVKATEVTFFDELKIDNKVDIIGNNVRGELPNIWLQ  779
            RATITLTSSSAGKATVSATVS+G +VKA EVTFFD LKIDNKVDI+G+NV G+LPNIWLQ
Sbjct  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780

Query  780  YGQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNGKGSVVIKATSGDKQTVSYTIKAP  839
            YGQFKLK SGG+GTYSW SENT+IATVD SGKVTL+GKG+ VI+ TSGDKQTVSYTIKAP
Sbjct  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840

Query  840  SYMIKVDKQAYYADAMSICKNLLPSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTS  899
            +YMI+V+++A YA+AMS+C NLLPS+QTVLS++Y+SWG+AN Y HY SM+SITAWI QT 
Sbjct  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900

Query  900  SEQRSGVSSTYNLITQNPLPGVNVNTPNVYAVCVE  934
            +++ SGVS+TY+LITQNP  +V +N+PNVYAVCVE
Sbjct  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935

3) eae in NC_002655


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1280 bits (4858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 835/935 (90%), Positives = 901/935 (97%), Gaps = 1/935 (0%)

Query  1    MITHGCYtrtrhkhklkktlIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHDSYQ  60
            MITHG Y+RTRHKHKLKKT+IMLSAGLGLFFYVNQNSFANGENYFKL+SDSKLLT++  Q
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE  120
            +RLFYTLKTGETV+ +SKSQ+I+LS IWSLNKHLYSSESEM+KAAPGQQIILPLKKL+ E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALP+LGSAP+VAAGGVAGHTNK+TKMSPD T+SNMTDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SL+GDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLP NMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKL+YEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDK+WSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI  600
            NVQLTITVLSNGQVVDQVGVTDFTADKTSAKAD +++ITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSAKTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFFDQTKASI  660
            VSGTATLGANSA TDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIF +QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGKDAIKYTVKVMKNGQPVNNQSVTFSTNFGMFNGKSQTQ-ATTGNDG  719
            TEIKADKTTAVANG+DA+ YTVKVMK+GQPV+ +SV+F+TNFGMFNGKSQTQ ATTG+DG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  720  RATITLTSSSAGKATVSATVSDGAEVKATEVTFFDELKIDNKVDIIGNNVRGELPNIWLQ  779
            RATITLTSSSAGKATVSATVS+G +VKA EVTFFD LKIDNKVDI+G+NV G+LPNIWLQ
Sbjct  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780

Query  780  YGQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNGKGSVVIKATSGDKQTVSYTIKAP  839
            YGQFKLK SGG+GTYSW SENT+IATVD SGKVTL+GKG+ VI+ TSGDKQTVSYTIKAP
Sbjct  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840

Query  840  SYMIKVDKQAYYADAMSICKNLLPSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTS  899
            +YMI+V+++A YA+AMS+C NLLPS+QTVLS++Y+SWG+AN Y HY SM+SITAWI QT 
Sbjct  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900

Query  900  SEQRSGVSSTYNLITQNPLPGVNVNTPNVYAVCVE  934
            +++ SGVS+TY+LITQNP  +V +N+PNVYAVCVE
Sbjct  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935

4) ECs4559 in NC_002695


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1280 bits (4858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 835/935 (90%), Positives = 901/935 (97%), Gaps = 1/935 (0%)

Query  1    MITHGCYtrtrhkhklkktlIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHDSYQ  60
            MITHG Y+RTRHKHKLKKT+IMLSAGLGLFFYVNQNSFANGENYFKL+SDSKLLT++  Q
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE  120
            +RLFYTLKTGETV+ +SKSQ+I+LS IWSLNKHLYSSESEM+KAAPGQQIILPLKKL+ E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALP+LGSAP+VAAGGVAGHTNK+TKMSPD T+SNMTDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SL+GDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLP NMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKL+YEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDK+WSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI  600
            NVQLTITVLSNGQVVDQVGVTDFTADKTSAKAD +++ITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSAKTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFFDQTKASI  660
            VSGTATLGANSA TDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIF +QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGKDAIKYTVKVMKNGQPVNNQSVTFSTNFGMFNGKSQTQ-ATTGNDG  719
            TEIKADKTTAVANG+DA+ YTVKVMK+GQPV+ +SV+F+TNFGMFNGKSQTQ ATTG+DG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  720  RATITLTSSSAGKATVSATVSDGAEVKATEVTFFDELKIDNKVDIIGNNVRGELPNIWLQ  779
            RATITLTSSSAGKATVSATVS+G +VKA EVTFFD LKIDNKVDI+G+NV G+LPNIWLQ
Sbjct  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780

Query  780  YGQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNGKGSVVIKATSGDKQTVSYTIKAP  839
            YGQFKLK SGG+GTYSW SENT+IATVD SGKVTL+GKG+ VI+ TSGDKQTVSYTIKAP
Sbjct  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840

Query  840  SYMIKVDKQAYYADAMSICKNLLPSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTS  899
            +YMI+V+++A YA+AMS+C NLLPS+QTVLS++Y+SWG+AN Y HY SM+SITAWI QT 
Sbjct  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900

Query  900  SEQRSGVSSTYNLITQNPLPGVNVNTPNVYAVCVE  934
            +++ SGVS+TY+LITQNP  +V +N+PNVYAVCVE
Sbjct  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935

5) eae in NC_013008


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1280 bits (4858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 835/935 (90%), Positives = 901/935 (97%), Gaps = 1/935 (0%)

Query  1    MITHGCYtrtrhkhklkktlIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHDSYQ  60
            MITHG Y+RTRHKHKLKKT+IMLSAGLGLFFYVNQNSFANGENYFKL+SDSKLLT++  Q
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE  120
            +RLFYTLKTGETV+ +SKSQ+I+LS IWSLNKHLYSSESEM+KAAPGQQIILPLKKL+ E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALP+LGSAP+VAAGGVAGHTNK+TKMSPD T+SNMTDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SL+GDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLP NMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKL+YEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDK+WSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI  600
            NVQLTITVLSNGQVVDQVGVTDFTADKTSAKAD +++ITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSAKTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFFDQTKASI  660
            VSGTATLGANSA TDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIF +QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGKDAIKYTVKVMKNGQPVNNQSVTFSTNFGMFNGKSQTQ-ATTGNDG  719
            TEIKADKTTAVANG+DA+ YTVKVMK+GQPV+ +SV+F+TNFGMFNGKSQTQ ATTG+DG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  720  RATITLTSSSAGKATVSATVSDGAEVKATEVTFFDELKIDNKVDIIGNNVRGELPNIWLQ  779
            RATITLTSSSAGKATVSATVS+G +VKA EVTFFD LKIDNKVDI+G+NV G+LPNIWLQ
Sbjct  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780

Query  780  YGQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNGKGSVVIKATSGDKQTVSYTIKAP  839
            YGQFKLK SGG+GTYSW SENT+IATVD SGKVTL+GKG+ VI+ TSGDKQTVSYTIKAP
Sbjct  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840

Query  840  SYMIKVDKQAYYADAMSICKNLLPSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTS  899
            +YMI+V+++A YA+AMS+C NLLPS+QTVLS++Y+SWG+AN Y HY SM+SITAWI QT 
Sbjct  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900

Query  900  SEQRSGVSSTYNLITQNPLPGVNVNTPNVYAVCVE  934
            +++ SGVS+TY+LITQNP  +V +N+PNVYAVCVE
Sbjct  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935

6) CDCO157_4293 in NC_017906


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1280 bits (4858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 835/935 (90%), Positives = 901/935 (97%), Gaps = 1/935 (0%)

Query  1    MITHGCYtrtrhkhklkktlIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHDSYQ  60
            MITHG Y+RTRHKHKLKKT+IMLSAGLGLFFYVNQNSFANGENYFKL+SDSKLLT++  Q
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE  120
            +RLFYTLKTGETV+ +SKSQ+I+LS IWSLNKHLYSSESEM+KAAPGQQIILPLKKL+ E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALP+LGSAP+VAAGGVAGHTNK+TKMSPD T+SNMTDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SL+GDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLP NMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKL+YEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDK+WSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI  600
            NVQLTITVLSNGQVVDQVGVTDFTADKTSAKAD +++ITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSAKTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFFDQTKASI  660
            VSGTATLGANSA TDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIF +QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGKDAIKYTVKVMKNGQPVNNQSVTFSTNFGMFNGKSQTQ-ATTGNDG  719
            TEIKADKTTAVANG+DA+ YTVKVMK+GQPV+ +SV+F+TNFGMFNGKSQTQ ATTG+DG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  720  RATITLTSSSAGKATVSATVSDGAEVKATEVTFFDELKIDNKVDIIGNNVRGELPNIWLQ  779
            RATITLTSSSAGKATVSATVS+G +VKA EVTFFD LKIDNKVDI+G+NV G+LPNIWLQ
Sbjct  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780

Query  780  YGQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNGKGSVVIKATSGDKQTVSYTIKAP  839
            YGQFKLK SGG+GTYSW SENT+IATVD SGKVTL+GKG+ VI+ TSGDKQTVSYTIKAP
Sbjct  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840

Query  840  SYMIKVDKQAYYADAMSICKNLLPSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTS  899
            +YMI+V+++A YA+AMS+C NLLPS+QTVLS++Y+SWG+AN Y HY SM+SITAWI QT 
Sbjct  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900

Query  900  SEQRSGVSSTYNLITQNPLPGVNVNTPNVYAVCVE  934
            +++ SGVS+TY+LITQNP  +V +N+PNVYAVCVE
Sbjct  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935

7) eae in NC_013941


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1270 bits (4820),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 835/935 (90%), Positives = 900/935 (97%), Gaps = 1/935 (0%)

Query  1    MITHGCYtrtrhkhklkktlIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHDSYQ  60
            MITHG Y+RTRHKHKLKKT+IMLSAGLGLFFYVNQNSFANGENYFKL+SDSKLLT++  Q
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE  120
            +RLFYTLKTGETV+ +SKSQ+I+LS IWSLNKHLYSSESEM+KAAPGQQIILPLKKL+ E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALP+LGSAP+VAAGGVAGHTNK+TKMSPD T+SNMTDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SL+GDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLP NMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKL+YEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDK+WSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI  600
            NVQLTITVLSNGQVVDQVGVTDFTADKTSAKAD +++ITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSAKTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFFDQTKASI  660
            VSGTATLGANSA TDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIF +QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGKDAIKYTVKVMKNGQPVNNQSVTFSTNFGMFNGKSQTQ-ATTGNDG  719
            TEIKADKTTAVANG+DA+ YTVKVMK+GQPV+ +SV+F+TNFGMFNGKSQTQ ATTG+DG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  720  RATITLTSSSAGKATVSATVSDGAEVKATEVTFFDELKIDNKVDIIGNNVRGELPNIWLQ  779
            RATITLTSSSAGKATVSATVS+G +VKA EVTFFD LKIDNKVDI+G+NV G+LPNIWLQ
Sbjct  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780

Query  780  YGQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNGKGSVVIKATSGDKQTVSYTIKAP  839
            YGQFKLK SGG+GTYSW SENT+IATVD SGKVTL+GKG+ VI+ TSGDKQTVSYTIKAP
Sbjct  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840

Query  840  SYMIKVDKQAYYADAMSICKNLLPSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTs  899
            +YMI+V+++A YA+AMS+C NLLPS+QTVLS++Y+SWG+AN Y HY SM+SITAWI QT 
Sbjct  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900

Query  900  seqssgvssTYNLITQNPLPRVNVNTPNVYAVCVE  934
            +++ SGVS+TY+LITQNP   V +N+PNVYAVCVE
Sbjct  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935

8) ECO55CA74_21185 in NC_017656


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1270 bits (4820),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 835/935 (90%), Positives = 900/935 (97%), Gaps = 1/935 (0%)

Query  1    MITHGCYtrtrhkhklkktlIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHDSYQ  60
            MITHG Y+RTRHKHKLKKT+IMLSAGLGLFFYVNQNSFANGENYFKL+SDSKLLT++  Q
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE  120
            +RLFYTLKTGETV+ +SKSQ+I+LS IWSLNKHLYSSESEM+KAAPGQQIILPLKKL+ E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALP+LGSAP+VAAGGVAGHTNK+TKMSPD T+SNMTDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SL+GDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLP NMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKL+YEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDK+WSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI  600
            NVQLTITVLSNGQVVDQVGVTDFTADKTSAKAD +++ITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSAKTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFFDQTKASI  660
            VSGTATLGANSA TDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIF +QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGKDAIKYTVKVMKNGQPVNNQSVTFSTNFGMFNGKSQTQ-ATTGNDG  719
            TEIKADKTTAVANG+DA+ YTVKVMK+GQPV+ +SV+F+TNFGMFNGKSQTQ ATTG+DG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  720  RATITLTSSSAGKATVSATVSDGAEVKATEVTFFDELKIDNKVDIIGNNVRGELPNIWLQ  779
            RATITLTSSSAGKATVSATVS+G +VKA EVTFFD LKIDNKVDI+G+NV G+LPNIWLQ
Sbjct  721  RATITLTSSSAGKATVSATVSGGNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWLQ  780

Query  780  YGQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNGKGSVVIKATSGDKQTVSYTIKAP  839
            YGQFKLK SGG+GTYSW SENT+IATVD SGKVTL+GKG+ VI+ TSGDKQTVSYTIKAP
Sbjct  781  YGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIKAP  840

Query  840  SYMIKVDKQAYYADAMSICKNLLPSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTs  899
            +YMI+V+++A YA+AMS+C NLLPS+QTVLS++Y+SWG+AN Y HY SM+SITAWI QT 
Sbjct  841  NYMIRVGNKASYANAMSFCGNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSITAWITQTE  900

Query  900  seqssgvssTYNLITQNPLPRVNVNTPNVYAVCVE  934
            +++ SGVS+TY+LITQNP   V +N+PNVYAVCVE
Sbjct  901  ADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCVE  935

9) eaeA in NC_011601


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1191 bits (4519),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 763/942 (81%), Positives = 853/942 (91%), Gaps = 12/942 (1%)

Query  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHNSYQ  60
            MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKL+SDSKLLT+N  Q
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE  120
            +RLFYTLKTGETV+ +SKSQ+I+LS IWSLNKHLYSSESEM+KAAPGQQIILPLKKL+ E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALP+LGSAP+VAAGGVAGHTNK+TKMSPD T+SNMTDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240
            SL+GDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKPWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDKPWSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTERSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTE+STQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNVYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSN+YKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVLLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVAQANVPVSFNI  600
            NV LTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTAVLSANSANTNGSGKATVTLKSDKPGQVVVSAKTAEMTSALNANAVIFVDQTKASI  660
            VSGTA L+ANSA T+++GKATVTLKS  PGQVVVSAKTAEMTSALNA+AVIFV+QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAVANGQDAITYTVKVMKGDKPVSNQEVTFTTTLGKLSNSTE----KTDTNG  716
            TEIKADKTTAVANG+DA+TYTVKVMK ++PV  + V+FTT +G ++  ++     T+++G
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  717  YAKVTLTSTTPGKSLvsarvsdvavdvKAPEVEFFTTLTIDDGNIEIVGTGVKGKLPTVW  776
             A +TLTS+++GK+   +     + DVKAPEV FF  L ID+ +++I+G  V G LP +W
Sbjct  721  RATITLTSSSAGKA-TVSATVSGGNDVKAPEVTFFDGLKIDN-KVDILGKNVTGDLPNIW  778

Query  777  LQYGQVNLKASGGNGKYTWRSANPAIASVDASSGQVTLKEKGTTTISVISSDNQTATYTI  836
            LQYGQ +LK SGGNG Y+W+S N  IA+VD  SG+VTLK KGT+ I+V S+D+QT +YTI
Sbjct  779  LQYGQFKLKVSGGNGTYSWHSENTNIATVDE-SGKVTLKGKGTAVINVTSGDKQTVSYTI  837

Query  837  ATPNSLIVPNMSKRVTYNDAVNTCKNFGGKLPSSQNELENVFKAWGAANKYEYYKSSQTI  896
             +PN +I   ++++ +Y +A++ C   G  LPSSQ  L NV+++WG+AN Y+ Y+S Q+I
Sbjct  838  KAPNYMI--RVGNKASYANAMSFC---GNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSI  892

Query  897  ISWVQQTAQDAKSGVASTYDLVKQNPLNNIKASESNAYATCV  938
             +W+ QT  D  SGV++TYDL+ QNP +++  + +N YA CV
Sbjct  893  TAWITQTEADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCV  934

10) eae in NC_013716


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1152 bits (4369),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 722/942 (77%), Positives = 839/942 (90%), Gaps = 15/942 (1%)

Query  1    MIIHGFCTGTRHKHKLRKTFIMLGAGLGLFFSVNQNSFANGENYFKLRADSKLINNNIAQ  60
            MI HGF + TRHKHKL+KTFIML+AGLGLFF VNQNSFANGENYFKL +DSKL+ +N+AQ
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   DRLFYTLKTGESVAQLSKSQGISVPVIWSLNKHLYSSESEMMKASPGQQIILPLKKLSAE  120
            DRLFYTLKTGE+V+ +SKSQGIS++VIWSLNKHLYSSESEM+KA+PGQQIILPLKKLS E
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSTLPILGTAPVVAAADVAGHTKKM---SQDTTKSNTSDDKALNYaaqqaaslgsqlqsr  177
            Y++LP+LG+APVVAA++VAGHT+KM   S D+T+SN +DDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  178  slNGDYAKDTALSMAGNQASSQMQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDTENM  237
            SL+GDYAKDTAL++AGNQASSQ+QAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYD+E+M
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  238  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGNNTRLGIGGEYWRDYF  297
            LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSG+NTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  298  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGGKLMYEQYYGDNVAL  357
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALG+KLMYEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  358  FNADKLYSNPGAVTVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFHYQFDKPWSQQIE  417
            FN+DKL SNPGA TVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ++YQFDKPWSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  418  PQYVNELRTLSGSRYDLVQRNNNIILDYKKQDILSMNIPHNINGTEHSTHKIQLIVKSKY  477
            PQYVNELRTLSGSRYDLVQRNNNIIL+YKKQDILS+NIPH+INGTEHST+KIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  478  GLERIVWDDSTLRTqggqiqhsgsqsaqDYQAILPAYVQGGSNVYKVTARAYDRNGNSSN  537
            GL+RIVWDDS+LR+QGGQIQHSGSQSAQDYQAILPAYVQGGSN+YKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  538  NVQLTITVLSNGQVVDKVGITNFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI  597
            NVQLTITVLSNGQVVD+VG+T+FTADKTSAKAD +++ITYTATVKKNGV+QANVPVSFNI
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  598  VSGTATLSAKSANTNSSGKATVTLKSDKPGQVVVSAKTAEMTSALNANAVIFVDQTKASI  657
            VSGTATL+A+SA T+++GKATVTLKS  PGQVVVSAKTAEMTSALNA+AVIFV+QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  658  TEIKVDKTIATADNKDTIEYTVKVMKGGNPISGQKVTFSKDFGTLN----KTEATTDQNG  713
            TEIK DKT A A+ +D++ YTVKVMK G+P+ G+ V+F+ +FG +N      +ATT+ +G
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  714  YATVKLSSGTPGKAIVSAKVSEVNTEVKAATVEFFAPLSIDGNKVTVIGTGVTGSLPKNW  773
             AT+ L+S+++GKA VSA VS    +VKA+ V FF  L ID NKV ++G  VTG LP+ W
Sbjct  721  RATITLTSSSAGKATVSATVSG-GNDVKAPEVTFFDGLKID-NKVDILGKNVTGDLPNIW  778

Query  774  LQYGQVKLQATGGNGKYTWKSSNTKIASVDNSGVITLNEKGSATITVVSGDNQSATYTIN  833
            LQYGQ KL+ +GGNG Y+W S NT+IA+VD+SG +TL+ KG+A I V SGD+Q+ +YTI+
Sbjct  779  LQYGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIK  838

Query  834  TPDNIIIAVDKINRMAYSEAESRCQAISSNLAQSKSVLENIYSKWGAANKYPYYSSSNSL  893
            +P+ +I   +K    +Y++A S C  +   L+ S++VL N+Y+ WG+AN Y  Y S +S+
Sbjct  839  APNYMIRVGNKA---SYANAMSFCGNL---LPSSQTVLSNVYNSWGPANGYDHYRSMQSI  892

Query  894  TAWIKQSTSDSASGVSNTYDLVTTNSLTNVKATDKNAFAVCV  935
            TAWI Q+ +D  SGVS TYDL+T N+  +V     N +AVCV
Sbjct  893  TAWITQTEADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCV  934

11) eae in NC_013361


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1130 bits (4284),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 774/942 (83%), Positives = 862/942 (92%), Gaps = 12/942 (1%)

Query  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNAAQ  60
            MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQN AQ
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   DRLFYTLKTGETVANISKSQGISLSVIWSLNKHLYSSESEMMKAGPGQQIILPLKKLSVE  120
            DRLFYTLKTGETV++ISKSQGISLSVIWSLNKHLYSSESEM+KA+PGQQIILPLKKLSVE
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSalpvlgsapvvaaggvagHTNKMTKMSPDATKSNTTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALPVLGSAPVVAAGGVAGHTNKMTKMSPDAT+SN TDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTalgmassqassqlqawlqHYGTAEVNLQSGNNFDGSSLDFLLPFYDSENM  240
            SL+GDYAKDTALG+A++QASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSE+M
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKPWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDKPWSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhggsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQH+GSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLPNGQVVDQVGVTDFTADKTSAKADGIEAITYTATVKKNGVAQANVPVTFSI  600
            NVQLTITVL+NGQVVDQVGVTDFTADKTSAKADG EAITYTATVKKNGV+QANVPV+F+I
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSARTDGNGKATVTLKSATPGQVVVSAKTAEMTSPLNASAVIFVDQTKASI  660
            VSGTATLGANSA TD+NGKATVTLKS+TPGQVVVSAKTAEMTS+LNASAVIFV+QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAKADGSDAITYTVRVMKEGAPVVDQKVTFSKDFGTLN----KTEATTDQNG  716
            TEIKADKTTA A+G+DA+TYTV+VMKEG PV ++ V+F+ +FG +N      +ATT+ +G
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  717  YATVKLSSNTPGKAIVSAKVSGVGTEVKATTVEFFAPLSIDGDKVTVIGTGITGALPKNW  776
             AT+ L+S+++GKA VSA VSG G +VKA  V FF  L ID +KV ++G  +TG LP+ W
Sbjct  721  RATITLTSSSAGKATVSATVSG-GNDVKAPEVTFFDGLKID-NKVDILGKNVTGDLPNIW  778

Query  777  LQYGQVKLQATGGNGKYTWKSSNTKIASVDNSGVITLNEKGSATITVVSGDNQSATYTIN  836
            LQYGQ KL+ +GGNG Y+W S NT+IA+VD+SG +TL+ KG+A I V SGD+Q+ +YTI+
Sbjct  779  LQYGQFKLKVSGGNGTYSWHSENTNIATVDESGKVTLKGKGTAVINVTSGDKQTVSYTIK  838

Query  837  APGSIVIAVDKNTRVTYFDAENKCKTNSANLAQSKELLANIYSTWGAANKYPYYSGSKSL  896
            AP  ++   +K    +Y +A + C   +  L+ S+ +L+N+Y++WG+AN Y  Y + +S+
Sbjct  839  APNYMIRVGNKA---SYANAMSFC---GNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSI  892

Query  897  TAWIKQssseqssgvssTYDLVTKNQLINVGVNNKNAFSVCV  938
            TAWI Q+ +++ SGVS+TYDL+T+N   +V +N  N ++VCV
Sbjct  893  TAWITQTEADKISGVSTTYDLITQNPHKDVTLNAPNVYAVCV  934

12) eae in NC_013353


> NC_013364_P1|29|G21|260869677|YP_003236079.1|Escherichia_coli_O111:H-_str._11128|-|22790..25597|eae|ECO111_3743|theta 
intimin
Length=935

 Score = 1122 bits (4253),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 779/947 (83%), Positives = 858/947 (91%), Gaps = 13/947 (1%)

Query  1    MITHGFYtrtrhkhklkktFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNAAQ  60
            MITHGFY+RTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQN AQ
Sbjct  1    MITHGFYARTRHKHKLKKTFIMLSAGLGLFFYVNQNSFANGENYFKLSSDSKLLTQNVAQ  60

Query  61   DRLFYTLKTGETVANISKSQGISLSVIWSLNKHLYSSESEMMKAGPGQQIILPLKKLSVE  120
            DRLFYTLKTGETV++ISKSQGISLSVIWSLNKHLYSSESEM+KA+PGQQIILPLKKLSVE
Sbjct  61   DRLFYTLKTGETVSSISKSQGISLSVIWSLNKHLYSSESEMLKAAPGQQIILPLKKLSVE  120

Query  121  YSalpvlgsapvvaaggvagHTNKMTKMSPDATKSNTTDDKALNYaaqqaaslgsqlqsr  180
            Y+ALPVLGSAPVVAAGGVAGHTNKMTKMSPDAT+SN TDDKALNY+AQQAASLGSQLQSR
Sbjct  121  YGALPVLGSAPVVAAGGVAGHTNKMTKMSPDATQSNMTDDKALNYTAQQAASLGSQLQSR  180

Query  181  slNGDYAKDTalgmassqassqlqawlqHYGTAEVNLQSGNNFDGSSLDFLLPFYDSENM  240
            SL+GDYAKDTALG+A++QASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSE+M
Sbjct  181  SLHGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM  240

Query  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300
            LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
Sbjct  241  LAFGQVGARYIDSRFTANLGAGQRFFLPENMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF  300

Query  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360
            KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL
Sbjct  301  KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLMYEQYYGDNVAL  360

Query  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKPWSQQIE  420
            FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQ+RYQFDKPWSQQIE
Sbjct  361  FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQLRYQFDKPWSQQIE  420

Query  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480
            PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
Sbjct  421  PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY  480

Query  481  GLDRIVWDDSALRsqggqiqhsgsqsAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540
            GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
Sbjct  481  GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN  540

Query  541  NVQLTITVLPNGQVVDQVGVTDFTADKTSAKADNVDTITYTATVKKNGVAQANAPVTFSI  600
            NVQLTITVL+NGQVVDQVGVTDFTADKTSAKAD  ++ITYTATVKKNGV+QAN PV+F+I
Sbjct  541  NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADGTEAITYTATVKKNGVTQANVPVSFNI  600

Query  601  VSGTATLGANSAKTDGNGKATVTLKSGTPGQVVVSAKTAEMTSPLNASAVIFVDQTKASI  660
            VSGTATLGANSA TD+NGKATVTLKS+TPGQVVVSAKTAEMTS+LNASAVIFV+QTKASI
Sbjct  601  VSGTATLGANSATTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFVEQTKASI  660

Query  661  TEIKADKTTAKANGSDAITYIVKVMKNNQPEANHSVTFSTNFGNLGGNSNTQIVKTDKDG  720
            TEIKADKTTA ANG+DA+TY VKVMK+ QP   HSV+F+TNFG + G+S+TQ   T+ DG
Sbjct  661  TEIKADKTTAVANGNDAVTYTVKVMKEGQPVQGHSVAFTTNFGMFNGKSQTQNATTGSDG  720

Query  721  RATVKLTSGVAGNAVVSAKVSEVNTEVKAPEVKFFSVLSIDSNVSIIGTSANGALPNIWL  780
            RAT+ LTS+ AG+A VSA VS    +VKAPEV FF  L ID++V I+G +  G LPNIWL
Sbjct  721  RATITLTSSSAGKATVSATVSG-GNDVKAPEVTFFDGLKIDNKVDILGKNVTGDLPNIWL  779

Query  781  RYGQFKLTAKGGDGKYQWRSQDPSVASVDALTGRVTLLKKGTTTIEVVSGDNQTAMYTIN  840
            +YGQFKL   GG+G Y W+S++ ++A+VD  +G+VTL  KGT+ I+V SGD+QT  YTI+
Sbjct  780  QYGQFKLKVSGGNGTYSWHSENTNIATVDE-SGKVTLKGKGTAVINVTSGDKQTVSYTIK  838

Query  841  TPTKFISVETQNKVVYSDAEATCRMNNARLPSSTSELKDVYNKWGAANSYEGYKGKKTIT  900
            +P   I V   NK  Y++A + C      LPSS + L +VYN WG+AN+Y+ Y++ ++IT
Sbjct  839  APNYMIRVG--NKASYANAMSFC---GNLLPSSQTVLSNVYNSWGPANGYDHYRSMQSIT  893

Query  901  AWTQQTEDDKQKGWTSTFDIVTKNEIPSNGSNSKVHVNKANAFAVCV  947
            AW  QTE DK  G ++T+D++T+N      ++  V +N +N +AVCV
Sbjct  894  AWITQTEADKISGVSTTYDLITQN------PHKDVTLNAPNVYAVCV  934