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Homologs of int gene of DQ437742

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PSPA7_4434
( YP_001349785.1 )

phage integrase family site specific recombinase

NC_009656
(Pseudomonas aeruginosa PA7)

0.0

2) PA14_51650
( YP_792297.1 )

integrase

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

0.0

3) M062_04805
( YP_008131410.1 )

tyrosine recombinase XerC

NC_021577
(Pseudomonas aeruginosa RP73)

0.0

4) PADK2_24130
( YP_006484791.1 )

integrase

NC_018080
(Pseudomonas aeruginosa DK2)

0.0

5) NCGM2_1785
( YP_005980030.1 )

putative integrase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

0.0

100

6) G655_23935
( YP_007711623.1 )

phage integrase family site specific recombinase

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-175

7) G655_20460
( YP_007710931.1 )

phage integrase family site specific recombinase

NC_020912
(Pseudomonas aeruginosa B136-33)

4e-175

8) PSPA7_4530
( YP_001349880.1 )

phage integrase family site specific recombinase

NC_009656
(Pseudomonas aeruginosa PA7)

9e-119

9) AvCA_36590
( YP_007894588.1 )

phage integrase

NC_021149
(Azotobacter vinelandii CA)

3e-116

10) AvCA6_36590
( YP_007899637.1 )

phage integrase

NC_021150
(Azotobacter vinelandii CA6)

3e-116

11) Avin_36590
( YP_002800781.1 )

phage integrase

NC_012560
(Azotobacter vinelandii DJ)

3e-116

12) PFL_4752
( YP_261834.1 )

phage integrase family site-specific recombinase

NC_004129
(Pseudomonas protegens Pf-5)

5e-105

13) Psyr_1421
( YP_234510.1 )

Phage integrase

NC_007005
(Pseudomonas syringae B728a)

6e-91

• Sequence Alignments

1) PSPA7_4434 in NC_009656


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  645 bits (2438),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/398 (97%), Positives = 395/398 (99%), Gaps = 0/398 (0%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQEVDHRSVLGWRRKVLEQG  60
            MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQ+VDHR+VLGWRRKVLEQG
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARNW  120
            LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRAR+W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            LNMQVGAER TG+RARITPAWFWLCTFEVFY+TGIRLNALLCIRKRDIDW+NQLILIRGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  RAVLHARSLAQGALENVRKVDFSGSPQASAKPKPCGQPLARVSEAPPPEVRTEPAEPREH  360
            R+VLHARSLAQGALEN+RKVD+SGSPQASAKPKPCGQPLARVSEAPPPE RTEPAEPREH
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  361  TPGTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHL  398
            TP TGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHL
Sbjct  361  TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHL  398

2) PA14_51650 in NC_008463


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  640 bits (2420),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 387/401 (97%), Positives = 397/401 (99%), Gaps = 1/401 (0%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQEVDHRSVLGWRRKVLEQG  60
            MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQ+VDHR+VLGWRRKVLEQG
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARNW  120
            LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRAR+W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180
            LNMQVGAER TG+RARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKPCGQPLARMGEAPPQEARTEPAEPREH  360
            R+VLHARSLAQGALEN+RKVDYSGSPQASAKPKPCGQPLAR++EAPP EARTEPAEPREH
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  361  TPGTGIQGDATAWE-EALPQPPDTFEQSVLFTLMAQHLSNR  400
            TP TGIQG++TAWE EALPQPPDTFEQSVLFTLMAQHLSNR
Sbjct  361  TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHLSNR  401

3) M062_04805 in NC_021577


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  640 bits (2419),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/401 (96%), Positives = 394/401 (99%), Gaps = 0/401 (0%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60
            MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARSW  120
            LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRAR W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LSMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            L+MQVGAER TG+RARITPAWFWLCTFEVFY+TGIRLNALLCIRKRDIDW+NQLILIRGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEAEKAGFADDDQLFNVNRFSPHYKSKTMNSDQVEA  240
            TEKTHKEFVVPITEGLVPHLSRLLQEA++AGFADDDQLFNVNRFSPHYKSK MNSDQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKPCGQPLARVGEVPPPEARTEPSEPREH  360
            R+VLHARSLAQGALEN+RKVDYSGSPQASAKPKPCGQPLARV+E PPPEARTEP+EPREH
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  361  TQETGIQRGPTSWEAEAVPQPPDTFEQSVLFTLMAQHLSNR  401
            T  TGIQ GPT+WEAEA+PQPPDTFEQSVLFTLMAQHLSNR
Sbjct  361  TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHLSNR  401

4) PADK2_24130 in NC_018080


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  636 bits (2403),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/401 (96%), Positives = 395/401 (99%), Gaps = 1/401 (0%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVHDVDHRAVLGWRRKVLEQG  60
            MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATV+DVDHRAVLGWRRKVLEQG
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARSW  120
            LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRAR W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            LNMQVGAER TG+RARITPAWFWLCTFEVFY+TGIRLNALLCIRKRDIDW+NQLILIRGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYRKLTEKVAVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MYRKLTEKV+VRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKPCGQPLARMGEAPPQEARTEPAEPREH  360
            R+VLHARSLAQGALEN+RKVDYSGSPQASAKPKPCGQPLAR++EAPP EARTEPAEPREH
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  361  TPGTGIQGDATAWE-EALPQPPDTFEQRVLFTLMAQHLSNR  400
            TP TGIQG++TAWE EALPQPPDTFEQ VLFTLMAQHLSNR
Sbjct  361  TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHLSNR  401

5) NCGM2_1785 in NC_017549


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  632 bits (2387),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 400/400 (100%), Positives = 400/400 (100%), Gaps = 0/400 (0%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60
            MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120
            LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180
            LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSeapppeartepaepreH  360
            RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  361  TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHLSN  400
            TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHLSN
Sbjct  361  TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHLSN  400

6) G655_23935 in NC_020912


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  608 bits (2296),  Expect = 2e-175, Method: Compositional matrix adjust.
 Identities = 381/398 (96%), Positives = 393/398 (99%), Gaps = 1/398 (0%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQEVDHRSVLGWRRKVLEQG  60
            MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQ+VDHR+VLGWRRKVLEQG
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARNW  120
            LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRAR+W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            LNMQVGAER TG+RARITPAWFWLCTFEVFY+TGIRLNALLCIRKRDIDW+NQLILIRGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKPCGQPLARMGevpppeartepaepreH  360
            R+VLHARSLAQGALEN+RKVDYSGSPQASAKPKPCGQPLAR++E PPPEARTEPAEPREH
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  361  TPGTGIQGGPTVRE-EALPQPPDTFDQSVLFTLMAQHL  397
            TP TGIQGGPT +E EALPQPPDTF+QSVLFTLMAQHL
Sbjct  361  TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHL  398

7) G655_20460 in NC_020912


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  607 bits (2292),  Expect = 4e-175, Method: Compositional matrix adjust.
 Identities = 380/398 (96%), Positives = 392/398 (99%), Gaps = 1/398 (0%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQEVDHRSVLGWRRKVLEQG  60
            MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQ+VDHR+VLGWRRKVLEQG
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARNW  120
            LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRAR+W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            LNMQVGAER TG+RARITPAWFWLCTFEVFY+TGIRLNALLCIRKRDIDW+NQLILIRGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKPCGQPLARMGevpppeartepaepreH  360
            R+VLHARSLAQGALEN+RKVDYSGSPQASAKPKPCGQPLAR++E PPPEARTEPAEPREH
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  361  IPGTGIQGGPTVRE-EALPQPPDTFDQSVLFTLMAQHL  397
             P TGIQGGPT +E EALPQPPDTF+QSVLFTLMAQHL
Sbjct  361  TPWTGIQGGPTAWEAEALPQPPDTFEQSVLFTLMAQHL  398

8) PSPA7_4530 in NC_009656


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  420 bits (1580),  Expect = 9e-119, Method: Compositional matrix adjust.
 Identities = 233/330 (71%), Positives = 286/330 (87%), Gaps = 0/330 (0%)

Query  1    MTPLQLTEEYLLAHDLREASQKTYRSAARALIRHFGPAVSVQEITHRNILEWRREVLEQG  60
            MTP QLTEEY++AHDLREAS K YR+A++AL++HFGP+ +VQ++ HR +L WRR VLEQG
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSKRSWNTYSSHLRTIWGHAIESELLTHTQVNPFNKTGVIPPKRPSKTVALDAIQNARAW  120
            LSKRSWNTYS+HLRTIWG AIE EL+TH+QVNPF KT VIPP+R+SKTVA +AI  AR W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LKVQESSEHCTGERAQITPAWFWRCVFETFYDTGIRLNALLCIRKCDVQWDNRIIVVRGE  180
            L++Q ++E+ TGERA+ITPAWFW C FE FY TGIRLNALLCIRK D++W+N++I++RGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHREFSIPITDGMAPHIHRLLNEAETAGIKSTDQLFNVNRFSPHYSRQEMNSDQVEA  240
            TEKTH+EF +PIT+G+ PH+ RLL+EA+ AG+   DQLFNVNRFSPHY  + MNSDQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLASDLMKQPKRNIHVAKSLLNHSNIQTTMSYIEVDLDQM  300
            MYRKLTEKVGVRMTPHRFRHTLA+DLMK P RNIH++K LLNHSNIQTTMSYIE D D+M
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  QAVLDERRQAHDALRHRHKIDYSRSPQAAA  330
            ++VL+ R  A++AL + +K+DYS SPQA+A
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASA  330

9) AvCA6_36590 in NC_021150


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  411 bits (1548),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 243/398 (62%), Positives = 305/398 (77%), Gaps = 9/398 (2%)

Query  1    MTPQELAQAYIDDHELRPASKTIYRAATKALTRHFGTTIDVQTIDRRSILSWRSKVLAKG  60
            MTPQ+L++ YI  H+LR AS  IYRAATKAL +HFG T  VQ +D+R++L+WR KVL +G
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LAKRSWNTYSTHLRTIWGYAIEYGLLPQ-QPNPFKKTAVRPPKRASKTVASDAIHRARRW  119
            L+KRSWNTYS HLRTIWGYAIE  L+ + Q NPF+KT+V PP+RASKTVA++AI RAR+W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  120  LDSLVDEERCTGRRSKITPAWFWLATFEMFYYTGIRLNALLCLRVQDVDWDRQLILIRGD  179
            L+  V+ ER TG R++ITPAWFWL TFE+FY+TGIRLNALLC+R +D+DW+ QLILIRG+
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  180  TEKTHREYQVPIVEGLAPHIRELLDEAKRAGFVPTDQLFNVNRFSRHYRRSEMNTDQVEA  239
            TEKTH+E+ VPI EGL PH+  LL+EA RAGF   DQLFNVNRFS HY+   MN+DQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  240  MYRKLIEKIGVRMTPHRFRHTLASDLMRQPERNIHLTKSLLNHSNIATTMGYIEVDYDHM  299
            MYRKL EK+GVRMTPHRFRHTLA+DLM+ PERNIHLTK LLNHSNI TTM+YIE DYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  300  REVLHERSLQRNAAPFVRCEDASGAPPRDRASAP--RLLEQREQRIVLQVEGVGGAPCEL  357
            R VLH RSL + A   +R  D SG+P     + P  + L +  +    +     + P E 
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  358  TLR--LLAAPA---GEMVPSPPAELFEPSVIFTLMSNR  390
            T +  + ++P+   +E +P PP + FE SV+FTLM+++
Sbjct  361  TPWTGIQGGPTAWEAEALPQPP-DTFEQSVLFTLMAQH  397

10) AvCA_36590 in NC_021149


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  411 bits (1548),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 243/398 (62%), Positives = 305/398 (77%), Gaps = 9/398 (2%)

Query  1    MTPQELAQAYIDDHELRPASKTIYRAATKALTRHFGTTIDVQTIDRRSILSWRSKVLAKG  60
            MTPQ+L++ YI  H+LR AS  IYRAATKAL +HFG T  VQ +D+R++L+WR KVL +G
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LAKRSWNTYSTHLRTIWGYAIEYGLLPQ-QPNPFKKTAVRPPKRASKTVASDAIHRARRW  119
            L+KRSWNTYS HLRTIWGYAIE  L+ + Q NPF+KT+V PP+RASKTVA++AI RAR+W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  120  LDSLVDEERCTGRRSKITPAWFWLATFEMFYYTGIRLNALLCLRVQDVDWDRQLILIRGD  179
            L+  V+ ER TG R++ITPAWFWL TFE+FY+TGIRLNALLC+R +D+DW+ QLILIRG+
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  180  TEKTHREYQVPIVEGLAPHIRELLDEAKRAGFVPTDQLFNVNRFSRHYRRSEMNTDQVEA  239
            TEKTH+E+ VPI EGL PH+  LL+EA RAGF   DQLFNVNRFS HY+   MN+DQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  240  MYRKLIEKIGVRMTPHRFRHTLASDLMRQPERNIHLTKSLLNHSNIATTMGYIEVDYDHM  299
            MYRKL EK+GVRMTPHRFRHTLA+DLM+ PERNIHLTK LLNHSNI TTM+YIE DYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  300  REVLHERSLQRNAAPFVRCEDASGAPPRDRASAP--RLLEQREQRIVLQVEGVGGAPCEL  357
            R VLH RSL + A   +R  D SG+P     + P  + L +  +    +     + P E 
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  358  TLR--LLAAPA---GEMVPSPPAELFEPSVIFTLMSNR  390
            T +  + ++P+   +E +P PP + FE SV+FTLM+++
Sbjct  361  TPWTGIQGGPTAWEAEALPQPP-DTFEQSVLFTLMAQH  397

11) Avin_36590 in NC_012560


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  411 bits (1548),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 243/398 (62%), Positives = 305/398 (77%), Gaps = 9/398 (2%)

Query  1    MTPQELAQAYIDDHELRPASKTIYRAATKALTRHFGTTIDVQTIDRRSILSWRSKVLAKG  60
            MTPQ+L++ YI  H+LR AS  IYRAATKAL +HFG T  VQ +D+R++L+WR KVL +G
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LAKRSWNTYSTHLRTIWGYAIEYGLLPQ-QPNPFKKTAVRPPKRASKTVASDAIHRARRW  119
            L+KRSWNTYS HLRTIWGYAIE  L+ + Q NPF+KT+V PP+RASKTVA++AI RAR+W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  120  LDSLVDEERCTGRRSKITPAWFWLATFEMFYYTGIRLNALLCLRVQDVDWDRQLILIRGD  179
            L+  V+ ER TG R++ITPAWFWL TFE+FY+TGIRLNALLC+R +D+DW+ QLILIRG+
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  180  TEKTHREYQVPIVEGLAPHIRELLDEAKRAGFVPTDQLFNVNRFSRHYRRSEMNTDQVEA  239
            TEKTH+E+ VPI EGL PH+  LL+EA RAGF   DQLFNVNRFS HY+   MN+DQVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  240  MYRKLIEKIGVRMTPHRFRHTLASDLMRQPERNIHLTKSLLNHSNIATTMGYIEVDYDHM  299
            MYRKL EK+GVRMTPHRFRHTLA+DLM+ PERNIHLTK LLNHSNI TTM+YIE DYDHM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  300  REVLHERSLQRNAAPFVRCEDASGAPPRDRASAP--RLLEQREQRIVLQVEGVGGAPCEL  357
            R VLH RSL + A   +R  D SG+P     + P  + L +  +    +     + P E 
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREH  360

Query  358  TLR--LLAAPA---GEMVPSPPAELFEPSVIFTLMSNR  390
            T +  + ++P+   +E +P PP + FE SV+FTLM+++
Sbjct  361  TPWTGIQGGPTAWEAEALPQPP-DTFEQSVLFTLMAQH  397

12) PFL_4752 in NC_004129


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  374 bits (1406),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 200/321 (63%), Positives = 262/321 (82%), Gaps = 0/321 (0%)

Query  1    MTPVALLQEYLMDHVLRDASIKIYRSAMKALTKNFGKEVDITTLDRRKILAWRNNVVEGG  60
            MTP  L +EY+  H LR+AS KIYR+A KAL K+FG    +  +D+R +L+WR +V+E G
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  61   LSRRSWNTYSNHLRTIWTYALEYEIIPSSLTNPFKKSTLIAPKRPSKIISGDGIRQARHW  120
            LS+RSWNTYSNHLRTIW YA+E E++  S  NPF+K+T+I+P+R+SK +++++I +ARHW
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LQSLVDQEKSSGTRSPITPAWFWLATFEMFYYTGIRLNALLCIRVQDVDWDNRLVYVNAD  180
            L+  V+ E+++G R+ ITPAWFWL TFE+FY+TGIRLNALLCIR +D+DW+N+L+ + ++
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHREFCVPIMKGLEPHIQKLLNAASSQGFSGQDQLFNVNRFSIHYRSKIMNIDQVEG  240
            TEKTH+EF VPI  GL PH+ +LL+ A   GF+++DQLFNVNRFS HY+SK+MN DQVE+
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYKKLTSAFGIRMTPHRFRHTLATDLMRQPERNIHLTKTLLNHSNIATTMSYIEADYEHM  300
            MY+KLT   G+RMTPHRFRHTLATDLM+ PERNIHLTK LLNHSNI TTMSYIEADY+HM
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  RAVLDERSWHQGAIRLERRED  321
            R+VL+ RS  QGA+   R+ D
Sbjct  301  RTVLHARSLAQGALENIRKVD  321

13) Psyr_1421 in NC_007005


> DQ437742|3|G1|90569599|ABD94670.1|Pseudomonas_aeruginosa_6077|-|446..1729|int|EXA1a|putative 
integrase
Length=427

 Score =  327 bits (1228),  Expect = 6e-91, Method: Compositional matrix adjust.
 Identities = 187/332 (57%), Positives = 250/332 (76%), Gaps = 9/332 (2%)

Query  4    MTLPELTQEYILTHDLRPDTVKIYWAATKSYVRFFGDCLAC-ETTHRDMLDWRRSELER-  61
            MT  +LT+EYI++HDLR  + KIY+AATK+ ++ FG   +  +  HR +L+WRR  LE+ 
Sbjct  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60

Query  62   ISKRSWNTYSSHLRTIYGYAIEHGLLELV-VNPLKNTRVMPPKRPKKTVANDASVRARNW  120
            +SKRSWNTYS+HLRTI GYAIEH L+    VNP+++T V+PP+R+ KTVA +A +RAR+W
Sbjct  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120

Query  121  LRMLTAEERATAKRTEITPAWFWLSVFETFYYTGIRLNALLCLRYADVYLRDRLIRVRGE  180
            L M  + ER+T+ R+ ITPAWFWL  FE FY+TGIRLNALLC+R  D+   ++LI +RGE
Sbjct  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180

Query  181  TEKTHREFLIPIPDGLMAQLETLMQAAKALRFQPGDQLFNVNRFSGHYRRHEMNSNQVEA  240
            TEKTH+EF++PI +GL+++L  L+Q A    F  +DQLFNVNRFS HY+   MNS+QVEA
Sbjct  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240

Query  241  MYKKLTAMTGIRMTPHRFRHTIASELMTLPERNIYLTKKLLNHSNIATTMDYIEPDYDMM  300
            MY+KLT   G+RMTPHRFRHT+A++LM  PERNI LTK LLNHSNI TTM YIE+DYD M
Sbjct  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300

Query  301  REVMNERGKRPA------KISYMAKPDATLRA  326
            R V++ R+   +      K+ Y + P+A+ ++
Sbjct  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKP  332