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Homologs of APECO1_2644 gene of NC_008563_P5

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECABU_c43150
( YP_006108265.1 )

hypothetical protein

NC_017631
(Escherichia coli ABU 83972)

6e-40

100

2) APECO1_2644
( YP_859414.1 )

hypothetical protein

NC_008563
(Escherichia coli APEC O1)

6e-40

100

3) LF82_583
( YP_002558665.1 )

hypothetical protein

NC_011993
(Escherichia coli LF82)

6e-40

100

4) hcpA_6
( YP_008573898.1 )

Secreted protein hcp

NC_022370
(Escherichia coli PMV-1)

6e-40

100

5) PCC21_040880
( YP_006648744.1 )

hypothetical protein

NC_018525
(Pectobacterium carotovorum PCC21)

7e-14

6) hcp4
( NP_992879.1 )

hemolysin-coregulated protein

NC_005810
(Yersinia pestis 91001)

2e-12

7) A1122_16500
( YP_005522939.1 )

hypothetical protein

NC_017168
(Yersinia pestis A1122)

2e-12

8) YPA_1249
( YP_651161.1 )

hypothetical protein

NC_008150
(Yersinia pestis Antiqua)

2e-12

9) YPD4_1654
( YP_005504865.1 )

hypothetical protein

NC_017154
(Yersinia pestis D106004)

2e-12

10) YPC_2386
( YP_005624243.1 )

hypothetical protein

NC_017265
(Yersinia pestis Harbin 35)

2e-12

11) YPN_2252
( YP_648180.1 )

hypothetical protein

NC_008149
(Yersinia pestis Nepal516)

2e-12

12) YPDSF_1255
( YP_001162622.1 )

hypothetical protein

NC_009381
(Yersinia pestis Pestoides F)

2e-12

13) YPZ3_1864
( YP_003568036.1 )

hypothetical protein

NC_014029
(Yersinia pestis Z176003)

2e-12

14) YPTB1881
( YP_070404.1 )

hypothetical protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-12

15) YPTS_1927
( YP_001872351.1 )

Hcp1 family type VI secretion system effector

NC_010634
(Yersinia pseudotuberculosis PB1/+)

2e-12

• Sequence Alignments

1) ECABU_c43150 in NC_017631


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score =  157 bits (578),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60
           MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR  97
           SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR  97

2) APECO1_2644 in NC_008563


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score =  157 bits (578),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60
           MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR  97
           SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR  97

3) LF82_583 in NC_011993


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score =  157 bits (578),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60
           MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR  97
           SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR  97

4) hcpA_6 in NC_022370


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score =  157 bits (578),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60
           MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR  97
           SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR  97

5) PCC21_040880 in NC_018525


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 70/96 (73%), Gaps = 1/96 (1%)

Query  1   MDNIIYLKMTVEKQGLISSGCSTLESIGNKYQSSHEDEIFVYELTNQITRADNVS-IHPI  59
           M + IYL +T E+QG ISS C+T  SIGN+ Q +HEDEIF + L+N IT +++ S +H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EIRKPIDKSTPLLAQSLSDNEKIECEFLFYRTSQSG  95
            + K IDKS+PLL +++++NE++  EF FYR ++ G
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

6) A1122_16500 in NC_017168


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

7) YPA_1249 in NC_008150


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

8) YPC_2386 in NC_017265


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

9) hcp4 in NC_005810


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

10) YPD4_1654 in NC_017154


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

11) YPN_2252 in NC_008149


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

12) YPDSF_1255 in NC_009381


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

13) YPZ3_1864 in NC_014029


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

14) YPTB1881 in NC_006155


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96

15) YPTS_1927 in NC_010634


> NC_008563_P5|3|G3|117626091|YP_859414.1|Escherichia_coli_APEC_O1|-|1095..1388|-|APECO1_2644|hypothetical 
protein
Length=97

 Score = 65.8 bits (230),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 46/96 (48%), Positives = 66/96 (69%), Gaps = 1/96 (1%)

Query  1   MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTH-HPV  59
           MS + YL +TG +QG IS+ C++  SIGNR Q +H+DEI  +SL+++IT     ++ H +
Sbjct  1   MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL  60

Query  60  EFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFG  95
            F K IDK SPL+  AI+NNE L   F +YR+N+FG
Sbjct  61  SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFG  96