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Homologs of SAB1912 gene of NC_007622_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAB1912
( YP_417371.1 )

integrase

NC_007622
(Staphylococcus aureus RF122)

2e-172

100

2) int
( YP_008485826.1 )

mobile element-associated integrase, putative

NC_022222
(Staphylococcus aureus 6850)

6e-168

3) SAT0131_02174
( YP_005753291.1 )

Integrase

NC_017347
(Staphylococcus aureus T0131)

1e-167

4) SAOV_2065
( YP_005737508.1 )

integrase

NC_017337
(Staphylococcus aureus ED133)

2e-166

5) int
( YP_001442603.1 )

hypothetical protein

NC_009782
(Staphylococcus aureus Mu3)

5e-163

6) int
( NP_372552.1 )

integrase

NC_002758
(Staphylococcus aureus Mu50)

5e-163

7) int
( NP_375136.1 )

hypothetical protein

NC_002745
(Staphylococcus aureus N315)

5e-163

8) int
( YP_252918.1 )

hypothetical protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

3e-156

9) Sca_1539
( YP_002634629.1 )

putative integrase

NC_012121
(Staphylococcus carnosus TM300)

4e-120

10) BTF1_27280
( YP_006613538.1 )

integrase

NC_018508
(Bacillus thuringiensis HD-789)

8e-74

11) GC56T3_0230
( YP_003669876.1 )

integrase

NC_014206
(Geobacillus sp. C56-T3)

2e-69

12) GTCCBUS3UF5_2700
( YP_004980696.1 )

integrase

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

2e-69

13) MUS_2455
( YP_006329110.1 )

DNA integration/recombination protein

NC_017912
(Bacillus amyloliquefaciens Y2)

3e-56

14) xerC3
( YP_005421513.1 )

tyrosine recombinase XerC

NC_017061
(Bacillus amyloliquefaciens YAU B9601-Y2)

3e-56

15) B1NLA3E_01040
( YP_007908491.1 )

DNA integration/recombination protein

NC_021171
(Bacillus sp. 1NLA3E)

9e-54

16) ydcL
( YP_008076802.1 )

putative phage integrase YdcL

NC_021362
(Bacillus licheniformis 9945A)

5e-50

• Sequence Alignments

1) SAB1912 in NC_007622


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  598 bits (2260),  Expect = 2e-172, Method: Compositional matrix adjust.
 Identities = 390/390 (100%), Positives = 390/390 (100%), Gaps = 0/390 (0%)

Query  1    MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS  60
            MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS
Sbjct  1    MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS  60

Query  61   TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120
            TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA
Sbjct  61   TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120

Query  121  QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD  180
            QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD
Sbjct  121  QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD  180

Query  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFEnntinitktyynpn  240
            ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
Sbjct  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN  240

Query  241  nnkkQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP  300
            NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP
Sbjct  241  NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP  300

Query  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360
            LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
Sbjct  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360

Query  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390
            NIYAKITNSYKKDASQKFSKLMENVSKDLF
Sbjct  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390

2) int in NC_022222


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  583 bits (2202),  Expect = 6e-168, Method: Compositional matrix adjust.
 Identities = 376/390 (97%), Positives = 385/390 (99%), Gaps = 0/390 (0%)

Query  1    MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPS  60
            MASYEKRG+TWRYRISLGKD  TGKYKYISNSGFKRKSDAKHHAEMVERQLR G+YIAPS
Sbjct  1    MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS  60

Query  61   TSTFKQVADDWISQYANEVKVSSVRAREKAINHAIERFNNKPIQTINKHEYQRFVNDISA  120
            TSTF+QVAD+W+SQYANEVKVSSVRAREKAI+HAIERFNNKPIQTINKHEYQRFVNDISA
Sbjct  61   TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120

Query  121  QYSKNYVDSIIASTNMIFKYAYDMKLIRIMPSEGIKRPKKKISVEELEDTEIHKKFLEKD  180
            QYSKNYVDSII+STNMIFKYAYDMKLIRIMPSE+IKRPKKK SVEELEDTEIHKKFLEKD
Sbjct  121  QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD  180

Query  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFEnntinitktyynpn  240
            ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
Sbjct  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN  240

Query  241  nnkkQFQILTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP  300
            NNKKQFQILTPKTESSIGKI+VDPHVIKLLKNYKVDVQDTWKN LYVDNNFVFTDVNGYP
Sbjct  241  NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP  300

Query  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360
            LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
Sbjct  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360

Query  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390
            NIYAKITNSYKKDASQKFSKLMENVSKDLF
Sbjct  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390

3) SAT0131_02174 in NC_017347


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  582 bits (2198),  Expect = 1e-167, Method: Compositional matrix adjust.
 Identities = 375/390 (97%), Positives = 385/390 (99%), Gaps = 0/390 (0%)

Query  1    MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPS  60
            MASYEKRG+TWRYRISLGKD  TGKYKYISNSGFKRKSDAKHHAEMVERQLR G+YIAPS
Sbjct  1    MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS  60

Query  61   TSTFKQVADDWISQYANEVKVSSVRAREKAINHAIERFNNKPIQTINKHEYQRFVNDISA  120
            TSTF+QVAD+W+SQYANEVKVSSVRAREKAI+HAIERFNNKPIQTINKHEYQRFVNDISA
Sbjct  61   TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120

Query  121  QYSKNYVDSIIASTNMIFKYAYDMKLIRIMPSEGIKRPKKKISVEELEDTEIHKKFLEKD  180
            QYSKNYVDSII+STNMIFKYAYDMKLIRIMPSE+IKRPKKK SVEELEDTEIHKKFLEKD
Sbjct  121  QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD  180

Query  181  ELFQFLEVAKNHHSPQNSFELFCTLAYTGMRAGELLALKWSDIDFEnntinitktyynpn  240
            ELFQFLEVAKNHHSPQNSFE+FCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
Sbjct  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN  240

Query  241  nnkkQFQILTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP  300
            NNKKQFQILTPKTESSIGKI+VDPHVIKLLKNYKVDVQDTWKN LYVDNNFVFTDVNGYP
Sbjct  241  NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP  300

Query  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360
            LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
Sbjct  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360

Query  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390
            NIYAKITNSYKKDASQKFSKLMENVSKDLF
Sbjct  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390

4) SAOV_2065 in NC_017337


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  578 bits (2183),  Expect = 2e-166, Method: Compositional matrix adjust.
 Identities = 375/390 (97%), Positives = 384/390 (99%), Gaps = 0/390 (0%)

Query  1    MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGEYIAPS  60
            MASYEKRG+TWRYRISLGKD  TGKYKYISNSGFKRKSDAKHHAEMVERQLR GEYIAPS
Sbjct  1    MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS  60

Query  61   TSTFKQVADDWLKQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120
            TSTF+QVAD+WL QYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA
Sbjct  61   TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120

Query  121  QYSKNYVDSIIASTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKD  180
            QYSKNYVDSII+STNMIFKYAYDMKLIRI+PSE+IKRPKKK SVEELEDTEIHKKFLEKD
Sbjct  121  QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD  180

Query  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFEnntinitktyynpn  240
            ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
Sbjct  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN  240

Query  241  nnkkqyqVLTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP  300
            NNKKQ+Q+LTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKN LYVDNNFVFTDVNGYP
Sbjct  241  NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP  300

Query  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360
            LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
Sbjct  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360

Query  361  NIYAKITNSYKKDASQKFSKLMESVSKDLF  390
            NIYAKITNSYKKDASQKFSKLME+VSKDLF
Sbjct  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390

5) int in NC_009782


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  567 bits (2140),  Expect = 5e-163, Method: Compositional matrix adjust.
 Identities = 368/390 (95%), Positives = 383/390 (99%), Gaps = 0/390 (0%)

Query  1    MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPS  60
            MASYEKRG+TWRYRISLGKD  TGKYKYISNSGFKRKSDAKHHAEMVERQLR G+YIAPS
Sbjct  1    MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS  60

Query  61   TSTFKQVADDWISQYANEVKVSSVRAREKAIHHAIERFKNKPIQTIKKHDYQRFVNDISI  120
            TSTF+QVAD+W+SQYANEVKVSSVRAREKAIHHAIERF+NKPIQTI+KH+YQRFVNDIS 
Sbjct  61   TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120

Query  121  QYSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKD  180
            QYSKNYVDSI+TSTNMIFKYAYDMKLIRI+PSE+IKRPKKK SVEELEDTEIHKKFLEKD
Sbjct  121  QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD  180

Query  181  ELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFEnntinitktyynpn  240
            ELFQFLE+AKNHHSPQNSFEVF TLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
Sbjct  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN  240

Query  241  nnkkqyqiLTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP  300
            NNKKQ+QILTPKTESSIGKI+VDPHVIKLLKNYKVDVQDTWKN LYVDNNFVFTDVNGYP
Sbjct  241  NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP  300

Query  301  LVIKKLQLWIKAILKKTNITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360
            LVIKKLQLWIKAILKKT+ITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
Sbjct  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360

Query  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390
            NIYAKITNSYKKDASQKFSKLMENVSKDLF
Sbjct  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390

6) int in NC_002758


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  567 bits (2140),  Expect = 5e-163, Method: Compositional matrix adjust.
 Identities = 368/390 (95%), Positives = 383/390 (99%), Gaps = 0/390 (0%)

Query  1    MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPS  60
            MASYEKRG+TWRYRISLGKD  TGKYKYISNSGFKRKSDAKHHAEMVERQLR G+YIAPS
Sbjct  1    MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS  60

Query  61   TSTFKQVADDWISQYANEVKVSSVRAREKAIHHAIERFKNKPIQTIKKHDYQRFVNDISI  120
            TSTF+QVAD+W+SQYANEVKVSSVRAREKAIHHAIERF+NKPIQTI+KH+YQRFVNDIS 
Sbjct  61   TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120

Query  121  QYSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKD  180
            QYSKNYVDSI+TSTNMIFKYAYDMKLIRI+PSE+IKRPKKK SVEELEDTEIHKKFLEKD
Sbjct  121  QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD  180

Query  181  ELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFEnntinitktyynpn  240
            ELFQFLE+AKNHHSPQNSFEVF TLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
Sbjct  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN  240

Query  241  nnkkqyqiLTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP  300
            NNKKQ+QILTPKTESSIGKI+VDPHVIKLLKNYKVDVQDTWKN LYVDNNFVFTDVNGYP
Sbjct  241  NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP  300

Query  301  LVIKKLQLWIKAILKKTNITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360
            LVIKKLQLWIKAILKKT+ITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
Sbjct  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360

Query  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390
            NIYAKITNSYKKDASQKFSKLMENVSKDLF
Sbjct  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390

7) int in NC_002745


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  567 bits (2140),  Expect = 5e-163, Method: Compositional matrix adjust.
 Identities = 368/390 (95%), Positives = 383/390 (99%), Gaps = 0/390 (0%)

Query  1    MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPS  60
            MASYEKRG+TWRYRISLGKD  TGKYKYISNSGFKRKSDAKHHAEMVERQLR G+YIAPS
Sbjct  1    MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPS  60

Query  61   TSTFKQVADDWISQYANEVKVSSVRAREKAIHHAIERFKNKPIQTIKKHDYQRFVNDISI  120
            TSTF+QVAD+W+SQYANEVKVSSVRAREKAIHHAIERF+NKPIQTI+KH+YQRFVNDIS 
Sbjct  61   TSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISA  120

Query  121  QYSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKD  180
            QYSKNYVDSI+TSTNMIFKYAYDMKLIRI+PSE+IKRPKKK SVEELEDTEIHKKFLEKD
Sbjct  121  QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKD  180

Query  181  ELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFEnntinitktyynpn  240
            ELFQFLE+AKNHHSPQNSFEVF TLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
Sbjct  181  ELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN  240

Query  241  nnkkqyqiLTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP  300
            NNKKQ+QILTPKTESSIGKI+VDPHVIKLLKNYKVDVQDTWKN LYVDNNFVFTDVNGYP
Sbjct  241  NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYP  300

Query  301  LVIKKLQLWIKAILKKTNITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360
            LVIKKLQLWIKAILKKT+ITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
Sbjct  301  LVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM  360

Query  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390
            NIYAKITNSYKKDASQKFSKLMENVSKDLF
Sbjct  361  NIYAKITNSYKKDASQKFSKLMENVSKDLF  390

8) int in NC_007168


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  544 bits (2055),  Expect = 3e-156, Method: Compositional matrix adjust.
 Identities = 339/391 (87%), Positives = 369/391 (95%), Gaps = 1/391 (0%)

Query  1    MASYDQISKNNWRYRISLGKNAETGKYEYISKTGFKRKSDAKHQAEMIGRQLRNGDYIAP  60
            MASY++ + + WRYRISLGK+  TGKY YIS++GFKRKSDAKH+AEM+ RQLR G+YIAP
Sbjct  1    MASYEKRG-STWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAP  59

Query  61   SSSTFKQVADDWLKQYANDVKVSSVRAREKAIQHAIERFNTKPIQTIKKHDYQRFVDDIS  120
            S+STF+QVAD+WL QYAN+VKVSSVRAREKAI+HAIERFN KPIQTI+KH+YQRFV+DIS
Sbjct  60   STSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDIS  119

Query  121  AQYSKNYVDSIVASTNMIFKYAYDTRLIKAMPSEGIKRPKKKVSVEELEDIEIHKKFLEK  180
            AQYSKNYVDSI++STNMIFKYAYD +LI+ MPSE+IKRPKKK SVEELED EIHKKFLEK
Sbjct  120  AQYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEK  179

Query  181  DELFQFLKVAKYHHSPQNSFEVFTTLAYTGMRAGELLALKWSDIDFENNTISItktyynp  240
            DELFQFL VAK HHSPQNSFEVF TLAYTGMRAGELLALKWSDIDFENNTI+ITKTYYNP
Sbjct  180  DELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNP  239

Query  241  nnnkkHYQILTRKTESSIGKITVDPHVIQLLKDYKVNVQDTWKNELYVDNNFVFTDVNGY  300
            NNNKK++QILT KTESSIGKI VDPHVI+LLK+YKV+VQDTWKN LYVDNNFVFTDVNGY
Sbjct  240  NNNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGY  299

Query  301  PLVIKKLQLWIKAILKKTDITNKQISTHSFRYTHYALLIEAGVHIKEIQERLRHKDINTT  360
            PLVIKKLQLWIKAILKKTDITNKQISTHSFR TH ALLIEAGVHIKEIQERLRHKDINTT
Sbjct  300  PLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTT  359

Query  361  MNIYAKITNSYKKDASQKFSKLMENVSKGLF  391
            MNIYAKITNSYKKDASQKFSKLMENVSK+LF
Sbjct  360  MNIYAKITNSYKKDASQKFSKLMENVSKDLF  390

9) Sca_1539 in NC_012121


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  424 bits (1598),  Expect = 4e-120, Method: Compositional matrix adjust.
 Identities = 284/391 (73%), Positives = 355/391 (91%), Gaps = 2/391 (0%)

Query  1    MASYDQIAKNNWRYRISLGKNPQTGKYEYISKTGFQRKSDAKHHAEMVERQIRNNEYIAP  60
            MASY++ + + WRYRISLGK+ +TGKY YIS++GF+RKSDAKHHAEMVERQ+R  EYIAP
Sbjct  1    MASYEKRG-STWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAP  59

Query  61   SAHTFSYIADEFINHYRKDAKVSSVRAREKAIKHAKVAFGDKAIQSITKHQYQQFVDDIS  120
            S+ TF  +ADE +++Y ++ KVSSVRAREKAI HA   F +K+IQ+I KH+YQ+FV+DIS
Sbjct  60   STSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDIS  119

Query  121  TRFSKNYVDSIVASTNLVFKYALDMNLLKKLPNEGIKRPKQKVTVEELEHTelkqkflek  180
            +++SKNYVDSI++STN++FKYA DM+L++ +P+E+IKRPK+K +VEELE+TE+ +KFLEK
Sbjct  120  AQYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEK  179

Query  181  eelfeflNVAKNDHPPLNSFELFTLMAYSGCRAGEILALKWSDVDFDnytinitktyynp  240
            +ELF+FL+VAKN+H+P NSFE+F  +AY+G RAGE+LALKWSD+DF+N TINITKTYYNP
Sbjct  180  DELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNP  239

Query  241  nnnkknyqiLTPKTNASIGKLSIDPHVIKLLKDYKVNVQDKWKNELYVDNNFVFTDNNGY  300
            NNNKK++QILTPKT++SIGK+++DPHVIKLLK+YKV+VQD WKN LYVDNNFVFTD NGY
Sbjct  240  NNNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGY  299

Query  301  PLVIKKLSQWIQSIMSKTNI-DKNITTHSFRYTHCALLIEAGVHIKEIQERLRHKDINTT  359
            PLVIKKL  WI++I+ KT+I +K+I+THSFR THCALLIEAGVHIKEIQERLRHKDINTT
Sbjct  300  PLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTT  359

Query  360  MNIYAKITDSYKKDASQKFSQLMENVSKELF  390
            MNIYAKIT+SYKKDASQKFS+LMENVSK+LF
Sbjct  360  MNIYAKITNSYKKDASQKFSKLMENVSKDLF  390

10) BTF1_27280 in NC_018508


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  271 bits (1012),  Expect = 8e-74, Method: Compositional matrix adjust.
 Identities = 175/389 (45%), Positives = 266/389 (69%), Gaps = 9/389 (2%)

Query  1    MASFQKYETKQGYKWLLIAEIGIDPTTGKRKQKKVRGFKTKKEAQLAAARIEQEVANGTY  60
            MAS++K    +G  W     +G D  TGK K     GFK K +A+  A  +E+++  G Y
Sbjct  1    MASYEK----RGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEY  56

Query  61   INEPDILFKDFVQEWLNIYSKSTKISSLRVRQKQSNKLVDFFANIKMKDITKKMYQTALN  120
            I  +   F++  +EWL+ Y++  K+SS+R R+K  +  ++ F N  ++ I K  YQ  +N
Sbjct  57   IAPSTSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVN  116

Query  121  DLHDKGYAFNTLDGIHTAGRMIFKKAIELQIIKSNPTDNVKLPRKVETVEDIENDKKAIK  180
            D+  + Y+ N +D+I T+  MIFK A ++++I+  P++++K P+K  +VE++E+     K
Sbjct  117  DISAQ-YSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKK  175

Query  181  YLEKEELAHFLQVAKEK-GLDNDYVFFSILAYSGLRAGELLALKWTDVDFENNTIKITKT  239
            +LEK+EL +FL+VAK+  + +N +  F  LAY+G+RAGELLALKW+D+DFENNTI+ITKT
Sbjct  176  FLEKDELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKT  235

Query  240  LYNPDNNSQHYHLLTPKTKGSIRTIKMDQGIMKLLKSHKAKQNELKLYTRPQYVDQGFVI  299
             YNP+NN +++++LTPKT +SI  I +D  ++KLLK+ K   ++        YVD+ FV+
Sbjct  236  YYNPNNNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQD--TWKNGLYVDNNFVF  293

Query  300  TKASGYPEVMKMIQNRLKRLIKLSNIT-KNITPHSFRHTHTSLLIEAGVGIKEIQQRLGH  358
            T  +GYP V+K +Q ++K ++K ++IT K+I+ HSFRHTH +LLIEAGV IKEIQ+RL H
Sbjct  294  TDVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRH  353

Query  359  TDIETTMNIYAHMTKNMEEKASQKFSELM  387
             DI+TTMNIYA +T++    ASQKFS LM
Sbjct  354  KDINTTMNIYAKITNSYKKDASQKFSKLM  382

11) GC56T3_0230 in NC_014206


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  256 bits (957),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 172/396 (44%), Positives = 263/396 (67%), Gaps = 9/396 (2%)

Query  1    MASFQKYKTKDGEKWMFKMDVGIDPAtgkrktttrrgfktkkEAQLAAAKLYDEINNGGY  60
            MAS++K     G  W +++ +G D  TGK K  +  GFK K +A+  A  +  ++  G Y
Sbjct  1    MASYEK----RGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEY  56

Query  61   VKDTNILFKDFAQEWLAIYSETAKISTIRARKHELGHLMRYFGNLKLKDVTRKMYQDMLL  120
            +  +   F++ A+EWL+ Y++  K+S++RAR   + H +  F N  ++ + +  YQ  + 
Sbjct  57   IAPSTSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVN  116

Query  121  DLKKKGYADNTLDGIHTTGRMIFKKAMELELINSNPTEYAKVPKQKKTVEDIESGNKDMK  180
            D+  + Y+ N +D+I T+  MIFK A ++ LI   P+E  K PK+K +VE++E  + + K
Sbjct  117  DISAQ-YSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKK  175

Query  181  FLEKHELALFLKTAQEHGLAMD-YVVFSTLAYTGMRLGELLALQWKDINFKEHTIAITKT  239
            FLEK+EL  FL  A++H  + + + VF TLAYTGMR GELLAL+W DI+F ++TI ITKT
Sbjct  176  FLEKDELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKT  235

Query  240  LYSPRNNERYYQLLPPKTQGSIRTIKVDPNIISLLKKHKAEQNEIKLRMGELYHDLGFVF  299
             Y+P NN + +Q+L PKT++SI  I VDP++I LLK+ K + ++   +   LY D  FVF
Sbjct  236  YYNPNNNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDT--WKNGLYVDNNFVF  293

Query  300  ARPSGFPEVPKKIEIRMKRLLRIANI-HKHVTPHSLRHTHTSLLIEAGVGIKEIQQRLGH  358
            +  +G+P V KK+++++K +L+ ++I +K+++ HS+RHTH +LLIEAGV IKEIQ+RL H
Sbjct  294  TDVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRH  353

Query  359  ADIETTMNIYAHLTKDLEERASQKFSELMSNFIKNL  394
             DI+TTMNIYA +T+     ASQKFS LM N  K+L
Sbjct  354  KDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDL  389

12) GTCCBUS3UF5_2700 in NC_016593


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  256 bits (957),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 172/396 (44%), Positives = 263/396 (67%), Gaps = 9/396 (2%)

Query  1    MASFQKYKTKDGEKWMFKMDVGIDPAtgkrktttrrgfktkkEAQLAAAKLYDEINNGGY  60
            MAS++K     G  W +++ +G D  TGK K  +  GFK K +A+  A  +  ++  G Y
Sbjct  1    MASYEK----RGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEY  56

Query  61   VKDTNILFKDFAQEWLAIYSETAKISTIRARKHELGHLMRYFGNLKLKDVTRKMYQDMLL  120
            +  +   F++ A+EWL+ Y++  K+S++RAR   + H +  F N  ++ + +  YQ  + 
Sbjct  57   IAPSTSTFQQVADEWLSQYANEVKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVN  116

Query  121  DLKKKGYADNTLDGIHTTGRMIFKKAMELELINSNPTEYAKVPKQKKTVEDIESGNKDMK  180
            D+  + Y+ N +D+I T+  MIFK A ++ LI   P+E  K PK+K +VE++E  + + K
Sbjct  117  DISAQ-YSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKK  175

Query  181  FLEKHELALFLKTAQEHGLAMD-YVVFSTLAYTGMRLGELLALQWKDINFKEHTIAITKT  239
            FLEK+EL  FL  A++H  + + + VF TLAYTGMR GELLAL+W DI+F ++TI ITKT
Sbjct  176  FLEKDELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKT  235

Query  240  LYSPRNNERYYQLLPPKTQGSIRTIKVDPNIISLLKKHKAEQNEIKLRMGELYHDLGFVF  299
             Y+P NN + +Q+L PKT++SI  I VDP++I LLK+ K + ++   +   LY D  FVF
Sbjct  236  YYNPNNNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDT--WKNGLYVDNNFVF  293

Query  300  ARPSGFPEVPKKIEIRMKRLLRIANI-HKHVTPHSLRHTHTSLLIEAGVGIKEIQQRLGH  358
            +  +G+P V KK+++++K +L+ ++I +K+++ HS+RHTH +LLIEAGV IKEIQ+RL H
Sbjct  294  TDVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRH  353

Query  359  ADIETTMNIYAHLTKDLEERASQKFSELMSNFIKNL  394
             DI+TTMNIYA +T+     ASQKFS LM N  K+L
Sbjct  354  KDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDL  389

13) xerC3 in NC_017061


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  212 bits (789),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 134/333 (41%), Positives = 223/333 (67%), Gaps = 15/333 (4%)

Query  65   TFDQVAAEWLEEYMLTGKKKNTVRIRREEIK-ILNAYIAKSIINKITLRQYQKILNKLAE  123
            TF+QVA EWL +Y     K ++VR R   I   ++ +  K+I + I  ++YQ+++N ++ 
Sbjct  63   TFQQVADEWLSQYA-NEVKVSSVRAREKAIHHAIERFNNKPI-QTINKHEYQRFVNDISA  120

Query  124  QGYSRSTMNGVHTTAGMIFKYAVKVKFLKSNPIADALVPKKRITVEEIENNNIAEKYLEK  183
            Q YS++ ++++ T++ MIFKYA  +K+++  P  D   PKK+ +VEE+E+ +I  K+LEK
Sbjct  121  Q-YSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEK  179

Query  184  SEIEEFL-LAVKNHGLHMDLERFYLLAFSGMRSGELCALKWSDINFETKELRITKTIYSE  242
             E+ +FL +A ++H+ +  +E F  LA++GMR+GEL ALKWSDI+FE + + ITKT Y+ 
Sbjct  180  DELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNP  239

Query  243  SNNMREYELTPPKTPGSIRTIAIDDQIIAMLKAYKTKVKKMHLQSQTKLSEYHNENFIFA  302
            +NN +++++  PKT +SI  I++D ++I +LK YK  V     Q   K + Y ++NF+F+
Sbjct  240  NNNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDV-----QDTWKNGLYVDNNFVFT  294

Query  303  RANGYPYLPKSIIYRMERILKKTSI-KKHATPHIFRHSHISMLAEAGVDIATVMKRVGHD  361
              NGYP + K +  ++  ILKKT I +K+ + H FRH+H ++L EAGV+I  +  R+ H 
Sbjct  295  DVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHK  354

Query  362  DVKTTMKIYTHVTNKMKENASQKVQQTFGSILD  394
            D++TTM+IY+ +TN  K +ASQK    F+ +++
Sbjct  355  DINTTMNIYAKITNSYKKDASQK----FSKLME  383

14) MUS_2455 in NC_017912


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  212 bits (789),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 134/333 (41%), Positives = 223/333 (67%), Gaps = 15/333 (4%)

Query  65   TFDQVAAEWLEEYMLTGKKKNTVRIRREEIK-ILNAYIAKSIINKITLRQYQKILNKLAE  123
            TF+QVA EWL +Y     K ++VR R   I   ++ +  K+I + I  ++YQ+++N ++ 
Sbjct  63   TFQQVADEWLSQYA-NEVKVSSVRAREKAIHHAIERFNNKPI-QTINKHEYQRFVNDISA  120

Query  124  QGYSRSTMNGVHTTAGMIFKYAVKVKFLKSNPIADALVPKKRITVEEIENNNIAEKYLEK  183
            Q YS++ ++++ T++ MIFKYA  +K+++  P  D   PKK+ +VEE+E+ +I  K+LEK
Sbjct  121  Q-YSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEK  179

Query  184  SEIEEFL-LAVKNHGLHMDLERFYLLAFSGMRSGELCALKWSDINFETKELRITKTIYSE  242
             E+ +FL +A ++H+ +  +E F  LA++GMR+GEL ALKWSDI+FE + + ITKT Y+ 
Sbjct  180  DELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNP  239

Query  243  SNNMREYELTPPKTPGSIRTIAIDDQIIAMLKAYKTKVKKMHLQSQTKLSEYHNENFIFA  302
            +NN +++++  PKT +SI  I++D ++I +LK YK  V     Q   K + Y ++NF+F+
Sbjct  240  NNNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDV-----QDTWKNGLYVDNNFVFT  294

Query  303  RANGYPYLPKSIIYRMERILKKTSI-KKHATPHIFRHSHISMLAEAGVDIATVMKRVGHD  361
              NGYP + K +  ++  ILKKT I +K+ + H FRH+H ++L EAGV+I  +  R+ H 
Sbjct  295  DVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHK  354

Query  362  DVKTTMKIYTHVTNKMKENASQKVQQTFGSILD  394
            D++TTM+IY+ +TN  K +ASQK    F+ +++
Sbjct  355  DINTTMNIYAKITNSYKKDASQK----FSKLME  383

15) B1NLA3E_01040 in NC_021171


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  204 bits (758),  Expect = 9e-54, Method: Compositional matrix adjust.
 Identities = 131/324 (41%), Positives = 215/324 (67%), Gaps = 11/324 (3%)

Query  70   PFEKVALEWLNTYSRGKVKASTVRVREKEIK-ILLRYIAKVNIDKVSPRMHQNILNDLDD  128
             F++VA EWL+ Y+   VK S+VR REK I   + R+  K  I+ ++ +  Q ++ND+  
Sbjct  63   TFQQVADEWLSQYA-NEVKVSSVRAREKAIHHAIERFNNK-PIQTINKHEYQRFVNDISA  120

Query  129  KEYAKTTIEGVHVTANMIFNFAIKEKMRRDNPCTGSVIPVKKLTVEDIENNTIEEKYLEK  188
             +Y+K  ++++  ++NMIF++A   K+ R  P  +   P KK +VE++E+  I+ K+LEK
Sbjct  121  -QYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEK  179

Query  189  DELSEFLSTA-HQYGLLMDMEIFYLLAFSGMRSGELCALKWTDVDFETNEIRITKTLYNP  247
            DEL +FL  A ++ +     E+F  LA++GMR+GEL ALKW+D+DFE N I ITKT YNP
Sbjct  180  DELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNP  239

Query  248  DNNMHKYELTPPKTKGSIRTFDIDDSIIDLLKAHKKNQAKIKMANRHKYPDYHDKNFIFC  307
            +NN  ++++  PKT +SI  + +D  +I LLK       K+ + +  K   Y D+NF+F 
Sbjct  240  NNNKKQFQILTPKTESSIGKIPVDPHVIKLLKNY-----KVDVQDTWKNGLYVDNNFVFT  294

Query  308  RENGYPFIQKNIIIRMNRLLKKTSI-QKNATPHIFRHSHISMLAEAGIDINTIMKRVGHD  366
              NGYP++ K++ ++++ +LKKT I +K+ + H FRH+H ++L EAG++I+ I  R+ H 
Sbjct  295  DVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHK  354

Query  367  DMKTTMKIYTHITDKMKKNATEKI  390
            D++TTM+IY+ IT+  KK+A++K+
Sbjct  355  DINTTMNIYAKITNSYKKDASQKF  378

16) ydcL in NC_021362


> NC_007622_P2|30|G27|82751630|YP_417371.1|Staphylococcus_aureus_RF122|+|16774..17946|-|SAB1912|integrase
Length=390

 Score =  191 bits (710),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 159/387 (42%), Positives = 249/387 (65%), Gaps = 13/387 (3%)

Query  21   AKWYYRYDIV-DPTTGKRKQKEVGGFRTKaeaeeeaKRIQYELLQGTYIEEKEITFEEFA  79
            + W YR  +  D  TGK K    +GF+ K++A ++A  ++ +L  G YI     TF++ A
Sbjct  9    STWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPSTSTFQQVA  68

Query  80   KEWLIWYENTGKIKVSTIRVRKHEISRLMDYFQYLKMKDITRKQYQEALNDLKARGYAEN  139
             EWL  Y N   +KVS++R R   I + ++ F+   ++ I + +YQ  +ND+ A+ Y+ N
Sbjct  69   DEWLSQYANE--VKVSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISAQ-YSKN  125

Query  140  TIDGAHRTGRMIFKRAIELEVIKTDPTEYAIVPKVQKTVeelerekelpkylekeelAHF  199
             +D+   +  MIFK A ++ +I+  P+E    PK + +VEELE      K+LEK+EL +F
Sbjct  126  YVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKKKTSVEELEDTEIHKKFLEKDELFQF  185

Query  200  LSIIPDHQMDIRDYPIFFTLAYTGMRAGELCALKWSDIDFEEQTISITKTYYNPRNAIKE  259
            L +  +H+     + +F TLAYTGMRAGEL ALKWSDIDFE++TI+ITKTYYNP N  K+
Sbjct  186  LEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPNNNKKQ  245

Query  260  YELLTPKTKKSKRVIDVTEDVLIELDKLRKAQKEVQMKHRKT-YHNEGFVFAQLDEVNAG  318
            +++LTPKT  S   I V  +V I L  L++ + +VQ   ++  Y ++ FVF++++    G
Sbjct  246  FQILTPKTESSIGKIPVDPHV-IKL--LKNYKVDVQDTWKNGLYVDNNFVFTDVN----G  298

Query  319  YPAYVKLIEIRMKRLLKIANL-NPSLTPHSLRHTHTSLLAEAGVSLEQIMDRLGHTDDDT  377
            YP  +K +++++K +LK +++ N  ++ HS+RHTH +LL EAGV + +I +RL H D +T
Sbjct  299  YPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINT  358

Query  378  TKNIYLHITKPKKKEASHKFSELMRSL  404
            T NIY  IT++ KK+AS+KFS LM ++
Sbjct  359  TMNIYAKITNSYKKDASQKFSKLMENV  385