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Homologs of cobU gene of NC_008563_P3

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) cobU
( - )

NC_007613
(Shigella boydii Sb227)

e-297

97.4

2) cobU
( - )

NC_004741
(Shigella flexneri 2457T)

e-269

99.4

• Sequence Alignments

1) cobU in NC_007613


>NC_008563_P3|30|G26|117624181|YP_853094.1|Escherichia_coli_APEC_O1|-|47087..47632|cobU|APECO1_1074|adenosylcobinamide 
          Length = 546

 Score = 1016 bits (2621), Expect = e-297
 Identities = 531/546 (97%)
 Strand = Plus / Plus

Query: 1   atgatgatttcggtgacggggggcgtacggagcgggaagagtcgccacgcagaggcgctt 60
           |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1   atgatgattttggtgacggggggcgcacggagcgggaagagtcgccacgcagaggcgctt 60

Query: 61  attggggactcttcacaggttctgtata-cgccacctcgcaaatccttgatgatgagatg 119
           |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 61  attggggactcttcacaggttctgtatatcgctacctcgcaaatccttgatgatgagatg 120

Query: 120 gctgcacggatagaacatcatcggcaaggccgcccgacgcactggcacacagtggagcgc 179
           ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||
Sbjct: 121 gctgcacggatagaacatcatcggcaaggccgcccggagcactggcgcacagtggagcgc 180

Query: 180 tggcaacatcttgatgaattaattcatgcagacattaacccgcatgaggctgtattgctg 239
           |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| 
Sbjct: 181 tggcaacatcttgatgaattaattcatgcagacattaacccgaatgaggttgtgttgctt 240

Query: 240 gaatgcgttaccaccatggtgactaatctgttgtttgattatggcggcgataaagaccct 299
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaatgcgttaccacaatggtgactaatctgttgtttgattatggcggcgataaagaccct 300

Query: 300 gatgaatgggattatcaggcgatggaacaggcgattaatgctgagattcagtcgttgatt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgaatgggattatcaggcgatggaacaggcgattaatgctgagattcagtcgttgatt 360

Query: 360 gctgcctgccaacgttgtcccgcaaaggttgtattagtgactaacgaagtgggaatgggg 419
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctgcctgccaacgttgccccgcaaaggttgtattagtgactaacgaagtgggaatgggg 420

Query: 420 attgtgccggagagtcgtctggcacgacattttcgtgatattgccgggcgggtaaatcag 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgtgccggagagtcgtctggcacgacattttcgtgatattgccgggcgggtaaatcag 480

Query: 480 cagctggccgctgcggcaaatgaagtatggttggtggtttcgggtattggagtaaaaatc 539
           ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 481 cagttggccgctgcggcaaatgaagtatggctggtggtttcgggtattggagtaaaaatc 540

Query: 540 aaatga 545
           ||||||
Sbjct: 541 aaatga 546

2) cobU in NC_004741


>NC_008563_P3|30|G26|117624181|YP_853094.1|Escherichia_coli_APEC_O1|-|47087..47632|cobU|APECO1_1074|adenosylcobinamide 
          Length = 546

 Score = 923 bits (2383), Expect = e-269
 Identities = 474/477 (99%)
 Strand = Plus / Plus

Query: 1   tcttcacaggttctgtatatcgctacctcgcaaatccttgatgatgagatggctgcacgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  tcttcacaggttctgtatatcgctacctcgcaaatccttgatgatgagatggctgcacgg 129

Query: 61  atagaacatcatcggcaaagccgcccggagcactggcgcacagtggagcgctggcaacat 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atagaacatcatcggcaaggccgcccggagcactggcgcacagtggagcgctggcaacat 189

Query: 121 cttgatgaattaattcatgcagacattaacccgaatgaggctgtgttgctggaatgcgtt 180
           |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 190 cttgatgaattaattcatgcagacattaacccgaatgaggttgtgttgcttgaatgcgtt 249

Query: 181 accacaatggtgactaatctgttgtttgattatggcggcgataaagaccctgatgaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 accacaatggtgactaatctgttgtttgattatggcggcgataaagaccctgatgaatgg 309

Query: 241 gattatcaggcgatggaacaggcgattaatgctgagattcagtcgttgattgctgcctgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gattatcaggcgatggaacaggcgattaatgctgagattcagtcgttgattgctgcctgc 369

Query: 301 caacgttgccccgcaaaggttgtattagtgactaacgaagtgggaatggggattgtgccg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caacgttgccccgcaaaggttgtattagtgactaacgaagtgggaatggggattgtgccg 429

Query: 361 gagagtcgtctggcacgacattttcgtgatattgccgggcgggtaaatcagcagttggcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gagagtcgtctggcacgacattttcgtgatattgccgggcgggtaaatcagcagttggcc 489

Query: 421 gctgcggcaaatgaagtatggctggtggtttcgggtattggagtaaaaatcaaatga 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gctgcggcaaatgaagtatggctggtggtttcgggtattggagtaaaaatcaaatga 546