Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of shf gene of AF326777

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) O3M_21970
( YP_006772011.1 )

polysaccharide deacetylase family protein

NC_018650
(Escherichia coli 2009EL-2050)

8e-108

2) O3O_03310
( YP_006786201.1 )

polysaccharide deacetylase family protein

NC_018661
(Escherichia coli 2009EL-2071)

8e-108

3) O3K_22070
( YP_006781074.1 )

polysaccharide deacetylase family protein

NC_018658
(Escherichia coli 2011C-3493)

8e-108

4) shf
( YP_002405802.1 )

polysaccharide deacetylase

NC_011748
(Escherichia coli 55989)

8e-108

5) shf
( YP_006146979.1 )

putative polysaccharide deacetylase

NC_017646
(Escherichia coli CE10)

8e-108

6) EcE24377A_F0046
( YP_001451414.1 )

polysaccharide deacetylase family protein

NC_009786
(Escherichia coli E24377A)

8e-108

7) EcE24377A_E0060
( YP_001451597.1 )

polysaccharide deacetylase family protein

NC_009790
(Escherichia coli E24377A)

8e-108

8) shf
( YP_002410618.1 )

putative polysaccharide deacetylase

NC_011750
(Escherichia coli IAI39)

8e-108

9) UMNK88_5221
( YP_006136850.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

8e-108

10) EC042_4772
( YP_006099022.1 )

putative polysaccharide deacetylase

NC_017626
(Escherichia coli 042)

2e-107

11) EcE24377A_4855
( YP_001465788.1 )

polysaccharide deacetylase

NC_009801
(Escherichia coli E24377A)

2e-107

12) shf
( YP_002400884.1 )

putative polysaccharide deacetylase

NC_011745
(Escherichia coli ED1a)

3e-107

13) shf
( YP_006099155.1 )

polysaccharide deacetylase

NC_017627
(Escherichia coli 042)

4e-106

14) SBO_P116
( YP_406340.1 )

hypothetical protein

NC_007608
(Shigella boydii Sb227)

3e-105

15) SbBS512_A0260
( YP_001883272.1 )

polysaccharide deacetylase family protein

NC_010660
(Shigella boydii CDC 3083-94)

4e-105

16) shf
( YP_406108.1 )

putative carbohydrate transport protein

NC_007607
(Shigella dysenteriae Sd197)

5e-105

17) SSON_P179
( YP_313434.1 )

hypothetical protein

NC_007385
(Shigella sonnei Ss046)

5e-105

18) SFxv_5089
( YP_005712138.1 )

putative carbohydrate transport protein

NC_017319
(Shigella flexneri 2002017)

1e-104

19) shf
( NP_858368.1 )

carbohydrate transport protein

NC_004851
(Shigella flexneri 301)

6e-105

20) shf
( YP_002383049.1 )

carbohydrate transport protein

NC_011740
(Escherichia fergusonii ATCC 35469)

1e-84

21) ECO111_p3-85
( YP_003237819.1 )

putative polysaccharide deacetylase Ecf1

NC_013366
(Escherichia coli 11128)

4e-79

22) ECO26_p1-89
( YP_003237903.1 )

putative polysaccharide deacetylase Ecf1

NC_013369
(Escherichia coli 11368)

4e-79

23) ECO103_p20
( YP_003225088.1 )

putative polysaccharide deacetylase

NC_013354
(Escherichia coli 12009)

4e-79

24) ECH74115_B0111
( YP_002268486.1 )

polysaccharide deacetylase family protein

NC_011350
(Escherichia coli EC4115)

4e-79

25) L7026
( YP_325586.1 )

hypothetical protein

NC_007414
(Escherichia coli EDL933)

4e-79

26) ECSP_6102
( YP_003082236.1 )

hypothetical protein

NC_013010
(Escherichia coli TW14359)

4e-79

27) CDCO157_A0082
( YP_006315989.1 )

polysaccharide deacetylase family protein

NC_017907
(Escherichia coli Xuzhou21)

6e-79

28) SeD_A0332
( YP_002214258.1 )

polysaccharide deacetylase

NC_011205
(Salmonella enterica CT_02021853)

1e-69

29) ybeJ
( YP_002242439.1 )

hypothetical protein

NC_011294
(Salmonella enterica P125109)

1e-69

30) SPAB_03302
( YP_001589495.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-69

31) SE451236_07545
( YP_008264558.1 )

carbohydrate transporter

NC_021820
(Salmonella enterica 08-1736)

1e-69

32) ybeJ
( YP_005235975.1 )

putative xylanase/chitin deacetylase

NC_016856
(Salmonella enterica 14028S)

1e-69

33) CFSAN001921_15880
( YP_008256522.1 )

carbohydrate transporter

NC_021814
(Salmonella enterica CFSAN001921)

1e-69

34) SeSA_A0340
( YP_002113319.1 )

polysaccharide deacetylase

NC_011094
(Salmonella enterica CVM19633)

1e-69

35) STMMW_03131
( YP_005231380.1 )

hypothetical protein

NC_016854
(Salmonella enterica D23580)

1e-69

36) ybeJ
( NP_459301.1 )

xylanase/chitin deacetylase

NC_003197
(Salmonella enterica LT2)

1e-69

37) SL1344_0299
( YP_005180228.1 )

hypothetical protein

NC_016810
(Salmonella enterica SL1344)

1e-69

38) SeAg_B0333
( YP_002145283.1 )

polysaccharide deacetylase

NC_011149
(Salmonella enterica SL483)

1e-69

39) STMDT12_C03020
( YP_005245998.1 )

putative xylanase/chitin deacetylase

NC_016860
(Salmonella enterica T000240)

1e-69

40) STU288_13210
( YP_007903735.1 )

hypothetical protein

NC_021151
(Salmonella enterica U288)

1e-69

41) ybeJ
( YP_005250869.1 )

putative xylanase/chitin deacetylase

NC_016863
(Salmonella enterica UK-1)

1e-69

42) UMN798_0333
( YP_005395806.1 )

hypothetical protein

NC_017046
(Salmonella enterica 798)

3e-69

43) ybeJ
( YP_215283.1 )

xylanase/chitin deacetylase

NC_006905
(Salmonella enterica SC-B67)

3e-69

44) ybeJ
( YP_005241249.1 )

putative xylanase/chitin deacetylase

NC_016857
(Salmonella enterica ST4/74)

3e-69

45) STY0338
( NP_454909.1 )

conserved hypothetical protein

NC_003198
(Salmonella enterica CT18)

3e-69

46) STBHUCCB_27110
( YP_005218225.1 )

Polysaccharide deacetylase

NC_016832
(Salmonella enterica P-stx-12)

3e-69

47) t2556
( NP_806277.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

3e-69

48) TY21A_12975
( YP_007926850.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

3e-69

49) SBOV02451
( YP_008504139.1 )

polysaccharide deacetylase family protein

NC_022241
(Salmonella enterica 3114)

4e-69

50) CFSAN002050_08115
( YP_008259558.1 )

carbohydrate transporter

NC_021818
(Salmonella enterica CFSAN002050)

5e-69

51) SNSL254_A0340
( YP_002039544.1 )

polysaccharide deacetylase

NC_011080
(Salmonella enterica SL254)

5e-69

52) SEEB0189_17825
( YP_008309856.1 )

carbohydrate transporter

NC_021844
(Salmonella enterica CFSAN000189)

6e-69

53) SSPA2299
( YP_002143145.1 )

ybeJ-like protein

NC_011147
(Salmonella enterica AKU12601)

6e-69

54) SPA2460
( YP_151651.1 )

ybeJ-like protein

NC_006511
(Salmonella enterica ATCC 9150)

6e-69

55) SPC_0313
( YP_002635941.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

7e-69

56) ybeJ
( YP_002225428.1 )

hypothetical protein

NC_011274
(Salmonella enterica 287/91)

1e-68

57) SN31241_13000
( YP_008359217.1 )

Shf

NC_021902
(Salmonella enterica USMARC-S3124.1)

1e-68

58) SPUCDC_2658
( YP_008482254.1 )

hypothetical protein

NC_022221
(Salmonella enterica CDC1983-67)

7e-68

59) SPUL_2672
( YP_005213797.1 )

hypothetical protein

NC_016831
(Salmonella enterica RKS5078)

7e-68

60) I137_12490
( YP_008381917.1 )

carbohydrate transporter

NC_021984
(Salmonella enterica S06004)

7e-68

61) NH8B_3701
( YP_004848863.1 )

polysaccharide deacetylase

NC_016002
(Pseudogulbenkiania sp. NH8B)

7e-53

62) BN117_1727
( YP_006895687.1 )

hypothetical protein

NC_018828
(Bordetella parapertussis Bpp5)

2e-44

63) BN112_1202
( YP_006967279.1 )

hypothetical protein

NC_019382
(Bordetella bronchiseptica 253)

1e-43

64) BB3399
( NP_889933.1 )

hypothetical protein

NC_002927
(Bordetella bronchiseptica RB50)

1e-43

65) BPP1709
( NP_883984.1 )

hypothetical protein

NC_002928
(Bordetella parapertussis 12822)

1e-43

66) BN115_3186
( YP_006901415.1 )

hypothetical protein

NC_018829
(Bordetella bronchiseptica MO149)

2e-43

67) BN118_2255
( YP_006626816.1 )

hypothetical protein

NC_018518
(Bordetella pertussis 18323)

2e-43

68) BPTD_2289
( YP_005590358.1 )

hypothetical protein

NC_017223
(Bordetella pertussis CS)

2e-43

69) BP2330
( NP_880968.1 )

hypothetical protein

NC_002929
(Bordetella pertussis Tohama I)

2e-43

70) PT7_0505
( YP_004415669.1 )

hypothetical protein

NC_015458
(Pusillimonas sp. T7-7)

2e-42

71) Bpet3116
( YP_001631726.1 )

polysaccharide deacetylase

NC_010170
(Bordetella petrii DSM 12804)

2e-42

72) BAV2237
( YP_786751.1 )

lipopolysaccharide core oligosaccharide biosynthesis protein

NC_010645
(Bordetella avium 197N)

4e-42

73) XF1469
( NP_298758.1 )

hypothetical protein

NC_002488
(Xylella fastidiosa 9a5c)

2e-41

74) Xfasm12_0811
( YP_001775429.1 )

Shf protein

NC_010513
(Xylella fastidiosa M12)

1e-40

75) XFLM_09025
( YP_006001063.1 )

polysaccharide deacetylase

NC_017562
(Xylella fastidiosa GB514)

2e-40

76) XfasM23_0722
( YP_001829437.1 )

polysaccharide deacetylase

NC_010577
(Xylella fastidiosa M23)

2e-40

77) PD0687
( NP_778909.1 )

Shf protein

NC_004556
(Xylella fastidiosa Temecula1)

2e-40

78) BurJV3_2862
( YP_004793407.1 )

polysaccharide deacetylase

NC_015947
(Stenotrophomonas maltophilia JV3)

3e-40

79) Smlt3412
( YP_001973129.1 )

lipopolysaccharide core oligosaccharide biosynthesis protein

NC_010943
(Stenotrophomonas maltophilia K279a)

5e-40

80) Smal_2837
( YP_002029220.1 )

polysaccharide deacetylase

NC_011071
(Stenotrophomonas maltophilia R551-3)

1e-39

81) Daro_0156
( YP_283385.1 )

polysaccharide deacetylase

NC_007298
(Dechloromonas aromatica RCB)

9e-38

82) SMD_2987
( YP_006185678.1 )

polysaccharide deacetylase

NC_017671
(Stenotrophomonas maltophilia D457)

5e-36

83) AXYL_02010
( YP_003978054.1 )

polysaccharide deacetylase

NC_014640
(Achromobacter xylosoxidans A8)

3e-33

• Sequence Alignments

1) shf in NC_011748


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

2) EcE24377A_F0046 in NC_009786


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

3) EcE24377A_E0060 in NC_009790


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

4) shf in NC_011750


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

5) O3M_21970 in NC_018650


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

6) O3O_03310 in NC_018661


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

7) O3K_22070 in NC_018658


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

8) shf in NC_017646


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

9) UMNK88_5221 in NC_017641


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  382 bits (1437),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 233/250 (94%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

10) EC042_4772 in NC_017626


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  381 bits (1433),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/250 (93%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLQAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNL+AHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

11) EcE24377A_4855 in NC_009801


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  381 bits (1433),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/250 (93%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKNMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLK+MTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

12) shf in NC_011745


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  380 bits (1429),  Expect = 3e-107, Method: Compositional matrix adjust.
 Identities = 232/250 (93%), Positives = 239/250 (96%), Gaps = 3/250 (1%)

Query  11   MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKLTSREEQCKHLRQDLLSGREYLKKMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKK+TSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKERENCVWL--KR  248
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK   + +++  K 
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK-LRMAEKT  239

Query  249  RLFYYTTPFF  258
             ++ Y T FF
Sbjct  240  TFLLYNTVFF  249

13) shf in NC_017627


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  376 bits (1415),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 224/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%)

Query  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60
            MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  61   YLDNWFQVYPLLNEFNLKAHVFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120
            YLDNWFQVYPLLNEFNLKAH+FLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  121  RWSEVNEMLQSGLVEFHVHTYTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180
            RWSEVNEMLQSGLVEFHVHT THTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGAARIGRISTK  228
            HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKG++RIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

14) SBO_P116 in NC_007608


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  374 bits (1405),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 221/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)

Query  18   MYHHVSHCPGLVTLSPVTFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  77
            MYHHVSHCPGLVTLSP TFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  78   YLDNWFQVYPLLKEFNLKAHIFLITGFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  137
            YLDNWFQVYPLL+EFNLKAHIFLIT+FIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  138  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSK  197
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKF+SREEQCKHLRQDLLSGREYLK MTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  198  HLCWPEGYYNKDYIQVAEELGFYYLYTTERRMNAPAKGTTRIGRISTK  245
            HLCWPEGYYNKDYIQ+AEELGF YLYTTERRMNAPAKGTTRIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

15) SbBS512_A0260 in NC_010660


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  373 bits (1403),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 221/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)

Query  11   MYHHVSHCPGLVTLSPVTFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSP TFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLKEFNLKAHIFLITGFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLL+EFNLKAHIFLIT+FIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKF+SREEQCKHLRQDLLSGREYLK MTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQVAEELGFYYLYTTERRMNAPAKGTTRIGRISTK  238
            HLCWPEGYYNKDYIQ+AEELGF YLYTTERRMNAPAKGTTRIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

16) shf in NC_007607


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  373 bits (1401),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 221/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)

Query  1    MYHHVSHCPGLVTLSPVTFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60
            MYHHVSHCPGLVTLSP TFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  61   YLDNWFQVYPLLKEFNLKAHIFLITGFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120
            YLDNWFQVYPLL+EFNLKAHIFLIT+FIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSK  180
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKF+SREEQCKHLRQDLLSGREYLK MTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  181  HLCWPEGYYNKDYIQVAEELGFYYLYTTERRMNAPAKGTTRIGRISTK  228
            HLCWPEGYYNKDYIQ+AEELGF YLYTTERRMNAPAKGTTRIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

17) SSON_P179 in NC_007385


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  373 bits (1401),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 221/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)

Query  1    MYHHVSHCPGLVTLSPVTFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60
            MYHHVSHCPGLVTLSP TFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  61   YLDNWFQVYPLLKEFNLKAHIFLITGFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120
            YLDNWFQVYPLL+EFNLKAHIFLIT+FIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSK  180
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKF+SREEQCKHLRQDLLSGREYLK MTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  181  HLCWPEGYYNKDYIQVAEELGFYYLYTTERRMNAPAKGTTRIGRISTK  228
            HLCWPEGYYNKDYIQ+AEELGF YLYTTERRMNAPAKGTTRIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

18) SFxv_5089 in NC_017319


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  372 bits (1398),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 220/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)

Query  11   MYHHVSHCPGLVTLSPVTFRKQIKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  70
            MYHHVSHCPGLVTLSP TFRKQ+KWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPLLKEFNLKAHIFLITGFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  130
            YLDNWFQVYPLL+EFNLKAHIFLIT+FIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSK  190
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKF+SREEQCKHLRQDLLSGREYLK MTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNKDYIQVAEELGFYYLYTTERRMNAPAKGTTRIGRISTK  238
            HLCWPEGYYNKDYIQ+AEELGF YLYTTERRMNAPAKGTTRIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

19) shf in NC_004851


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  372 bits (1400),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 220/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)

Query  18   MYHHVSHCPGLVTLSPVTFRKQIKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  77
            MYHHVSHCPGLVTLSP TFRKQ+KWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  78   YLDNWFQVYPLLKEFNLKAHIFLITGFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  137
            YLDNWFQVYPLL+EFNLKAHIFLIT+FIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  138  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSK  197
            RWSEVNEMLQSGLVEFHVHTHTHTRWDKKF+SREEQCKHLRQDLLSGREYLK MTGKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  198  HLCWPEGYYNKDYIQVAEELGFYYLYTTERRMNAPAKGTTRIGRISTK  245
            HLCWPEGYYNKDYIQ+AEELGF YLYTTERRMNAPAKGTTRIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

20) shf in NC_011740


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  305 bits (1143),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 163/228 (72%), Positives = 199/228 (88%), Gaps = 0/228 (0%)

Query  11   MYHHVSNCPGLVTLSPKTFREQMKWLADHKWKTVTSDEIEYFYEGGELPRKSVMLTFDDG  70
            MYHHVS+CPGLVTLSP TFR QMKWLA+++WKT++SDE+E+FY GG LPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWFQVYPVLKEFNLKAHIFLIAGLIGDGPIRSFQKREYSHQDCEQIINKDNADDVML  130
            YLDNWFQVYP+L+EFNLKAHIFLI+++IG+GP+R    +EYSH+DCE+ I  +NAD+VML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVDVMLSSGLVEFHIHTHSHIRWDKMYSYREEQCQYLKQDILESRKVFLDKIGKCSK  190
            RWSEV+ ML SGLVEFH+HTH+H RWDK ++ REEQC+ L+QD+L +R  +    GKCSK
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HFCWPEGYYNSDYIKVAEELGFSYLYTTERRMNNRTNGTLRLGRISTK  238
            H+CWPEGYYN DYI++AEELGF YLYTTERRMN  ++GT R+GRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

21) ECO103_p20 in NC_013354


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  287 bits (1074),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 156/228 (69%), Positives = 190/228 (84%), Gaps = 0/228 (0%)

Query  11   MYHHVSRCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVMLTFDDG  70
            MYHHVS+CPGLVTLSPETF  QMKWLA+NNW+T++S ELE+FY+GG LPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWLRAWPVLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRSDEVML  130
            YLDNW++  P+L+E+NL AHIFLIT++IG+G VR    +EYSHRDCE+ IA   +D+VML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVREMRDSGLVEFHVHTHSHKRWDRLSVSRAEQCRLMKEDILVGKQCLTEKLGFCSS  190
            RWSEV EM +SGLVEFHVHTH+H RWD+   SR EQC+ +++D+L G++ L    G CS 
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNRDYINLAGKLGFSYLYTTERRMNCPENGSLRIGRISTK  238
            HLCWPEGYYN+DYI++A  LGF YLYTTERRMN P +G+ RIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

22) ECO111_p3-85 in NC_013366


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  287 bits (1074),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 156/228 (69%), Positives = 190/228 (84%), Gaps = 0/228 (0%)

Query  11   MYHHVSRCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVMLTFDDG  70
            MYHHVS+CPGLVTLSPETF  QMKWLA+NNW+T++S ELE+FY+GG LPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWLRAWPVLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRSDEVML  130
            YLDNW++  P+L+E+NL AHIFLIT++IG+G VR    +EYSHRDCE+ IA   +D+VML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVREMRDSGLVEFHVHTHSHKRWDRLSVSRAEQCRLMKEDILVGKQCLTEKLGFCSS  190
            RWSEV EM +SGLVEFHVHTH+H RWD+   SR EQC+ +++D+L G++ L    G CS 
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNRDYINLAGKLGFSYLYTTERRMNCPENGSLRIGRISTK  238
            HLCWPEGYYN+DYI++A  LGF YLYTTERRMN P +G+ RIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

23) ECH74115_B0111 in NC_011350


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  287 bits (1074),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 156/228 (69%), Positives = 190/228 (84%), Gaps = 0/228 (0%)

Query  11   MYHHVSRCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVMLTFDDG  70
            MYHHVS+CPGLVTLSPETF  QMKWLA+NNW+T++S ELE+FY+GG LPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWLRAWPVLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRSDEVML  130
            YLDNW++  P+L+E+NL AHIFLIT++IG+G VR    +EYSHRDCE+ IA   +D+VML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVREMRDSGLVEFHVHTHSHKRWDRLSVSRAEQCRLMKEDILVGKQCLTEKLGFCSS  190
            RWSEV EM +SGLVEFHVHTH+H RWD+   SR EQC+ +++D+L G++ L    G CS 
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNRDYINLAGKLGFSYLYTTERRMNCPENGSLRIGRISTK  238
            HLCWPEGYYN+DYI++A  LGF YLYTTERRMN P +G+ RIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

24) L7026 in NC_007414


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  287 bits (1074),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 156/228 (69%), Positives = 190/228 (84%), Gaps = 0/228 (0%)

Query  11   MYHHVSRCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVMLTFDDG  70
            MYHHVS+CPGLVTLSPETF  QMKWLA+NNW+T++S ELE+FY+GG LPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWLRAWPVLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRSDEVML  130
            YLDNW++  P+L+E+NL AHIFLIT++IG+G VR    +EYSHRDCE+ IA   +D+VML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  131  RWSEVREMRDSGLVEFHVHTHSHKRWDRLSVSRAEQCRLMKEDILVGKQCLTEKLGFCSS  190
            RWSEV EM +SGLVEFHVHTH+H RWD+   SR EQC+ +++D+L G++ L    G CS 
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  191  HLCWPEGYYNRDYINLAGKLGFSYLYTTERRMNCPENGSLRIGRISTK  238
            HLCWPEGYYN+DYI++A  LGF YLYTTERRMN P +G+ RIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

25) ECSP_6102 in NC_013010


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  287 bits (1073),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 156/228 (69%), Positives = 190/228 (84%), Gaps = 0/228 (0%)

Query  1    MYHHVSRCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVMLTFDDG  60
            MYHHVS+CPGLVTLSPETF  QMKWLA+NNW+T++S ELE+FY+GG LPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  61   YLDNWLRAWPVLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRSDEVML  120
            YLDNW++  P+L+E+NL AHIFLIT++IG+G VR    +EYSHRDCE+ IA   +D+VML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  121  RWSEVREMRDSGLVEFHVHTHSHKRWDRLSVSRAEQCRLMKEDILVGKQCLTEKLGFCSS  180
            RWSEV EM +SGLVEFHVHTH+H RWD+   SR EQC+ +++D+L G++ L    G CS 
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  181  HLCWPEGYYNRDYINLAGKLGFSYLYTTERRMNCPENGSLRIGRISTK  228
            HLCWPEGYYN+DYI++A  LGF YLYTTERRMN P +G+ RIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

26) ECO26_p1-89 in NC_013369


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  287 bits (1073),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 156/228 (69%), Positives = 190/228 (84%), Gaps = 0/228 (0%)

Query  1    MYHHVSRCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVMLTFDDG  60
            MYHHVS+CPGLVTLSPETF  QMKWLA+NNW+T++S ELE+FY+GG LPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  61   YLDNWLRAWPVLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRSDEVML  120
            YLDNW++  P+L+E+NL AHIFLIT++IG+G VR    +EYSHRDCE+ IA   +D+VML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  121  RWSEVREMRDSGLVEFHVHTHSHKRWDRLSVSRAEQCRLMKEDILVGKQCLTEKLGFCSS  180
            RWSEV EM +SGLVEFHVHTH+H RWD+   SR EQC+ +++D+L G++ L    G CS 
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  181  HLCWPEGYYNRDYINLAGKLGFSYLYTTERRMNCPENGSLRIGRISTK  228
            HLCWPEGYYN+DYI++A  LGF YLYTTERRMN P +G+ RIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

27) CDCO157_A0082 in NC_017907


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  286 bits (1072),  Expect = 6e-79, Method: Compositional matrix adjust.
 Identities = 156/228 (69%), Positives = 190/228 (84%), Gaps = 0/228 (0%)

Query  19   MYHHVSRCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVMLTFDDG  78
            MYHHVS+CPGLVTLSPETF  QMKWLA+NNW+T++S ELE+FY+GG LPRKSVMLTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  79   YLDNWLRAWPVLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRSDEVML  138
            YLDNW++  P+L+E+NL AHIFLIT++IG+G VR    +EYSHRDCE+ IA   +D+VML
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVML  120

Query  139  RWSEVREMRDSGLVEFHVHTHSHKRWDRLSVSRAEQCRLMKEDILVGKQCLTEKLGFCSS  198
            RWSEV EM +SGLVEFHVHTH+H RWD+   SR EQC+ +++D+L G++ L    G CS 
Sbjct  121  RWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSK  180

Query  199  HLCWPEGYYNRDYINLAGKLGFSYLYTTERRMNCPENGSLRIGRISTK  246
            HLCWPEGYYN+DYI++A  LGF YLYTTERRMN P +G+ RIGRISTK
Sbjct  181  HLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

28) SeD_A0332 in NC_011205


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGELVYSHDECQKLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGK-EYSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

29) ybeJ in NC_011294


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGELVYSHDECQKLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGK-EYSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

30) SPAB_03302 in NC_010102


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

31) SE451236_07545 in NC_021820


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

32) SeAg_B0333 in NC_011149


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGELVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGK-EYSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

33) SeSA_A0340 in NC_011094


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (954),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

34) ybeJ in NC_016856


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

35) STMMW_03131 in NC_016854


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

36) ybeJ in NC_003197


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

37) SL1344_0299 in NC_016810


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

38) STMDT12_C03020 in NC_016860


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

39) STU288_13210 in NC_021151


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

40) ybeJ in NC_016863


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

41) CFSAN001921_15880 in NC_021814


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  255 bits (953),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

42) ybeJ in NC_006905


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  254 bits (950),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRAGEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G A++VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

43) UMN798_0333 in NC_017046


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  254 bits (950),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  35   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  94
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  95   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  154
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  155  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  213
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  214  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  262
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

44) ybeJ in NC_016857


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  254 bits (950),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  35   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  94
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  95   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  154
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  155  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  213
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  214  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAK  262
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI++K
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

45) STY0338 in NC_003198


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  254 bits (949),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 144/229 (63%), Positives = 181/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++  +E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G  D+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

46) STBHUCCB_27110 in NC_016832


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  254 bits (949),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 144/229 (63%), Positives = 181/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++  +E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G  D+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

47) TY21A_12975 in NC_021176


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  254 bits (949),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 144/229 (63%), Positives = 181/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++  +E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G  D+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

48) t2556 in NC_004631


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  254 bits (949),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 144/229 (63%), Positives = 181/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++  +E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G  D+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

49) SBOV02451 in NC_022241


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  254 bits (948),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQKLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

50) CFSAN002050_08115 in NC_021818


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  253 bits (946),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

51) SNSL254_A0340 in NC_011080


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  253 bits (946),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

52) SEEB0189_17825 in NC_021844


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  253 bits (945),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

53) SSPA2299 in NC_011147


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  253 bits (945),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 144/229 (63%), Positives = 182/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKIVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WK +++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGSVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++G+VR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

54) SPA2460 in NC_006511


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  253 bits (945),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 144/229 (63%), Positives = 182/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKIVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WK +++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGSVRIPAGEPVYSHDECQMLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++G+VR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

55) SPC_0313 in NC_012125


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  253 bits (945),  Expect = 7e-69, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  35   MYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  94
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  95   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRAGEVM  154
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G A++VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  155  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  213
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  214  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  262
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

56) ybeJ in NC_011274


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  252 bits (942),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPCTLRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP T+R QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQKLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

57) SN31241_13000 in NC_021902


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  252 bits (943),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 146/229 (64%), Positives = 183/229 (80%), Gaps = 2/229 (0%)

Query  35   MYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  94
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  95   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVM  154
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH +C+  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  155  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  213
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  214  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  262
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

58) SPUCDC_2658 in NC_022221


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  249 bits (931),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 182/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDERQKLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH + +  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

59) SPUL_2672 in NC_016831


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  249 bits (931),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 182/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDERQKLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH + +  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

60) I137_12490 in NC_021984


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  249 bits (931),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 145/229 (64%), Positives = 182/229 (80%), Gaps = 2/229 (0%)

Query  11   MYHHVSDKPGQITLSPCTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGG  70
            MYHHVS+ PG +TLSP TFR QMKWLAE+ WKT+++ E+E FY+G++LPRKSVMLTFD+G
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   WLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDERQKLVKQGRADEVM  130
             LDNW+QV+P+L+EFNL AH+FL+TS+I++GPVR ++G   YSH + +  +  G AD+VM
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKE-YSHRDCEHQIATGNADNVM  119

Query  131  LRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSR-NPSDLLRVDILLSRKRMREMLGYCS  189
            LRWSEV EM  SGLVEFH HTHTH RWD+K  SR +    LR D+L +R  ++ M G CS
Sbjct  120  LRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCS  179

Query  190  QHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTK  238
            +HLCWPEG Y  DYI++AEELGF YLYTTERRMN P  G+ RIGRI+TK
Sbjct  180  KHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

61) NH8B_3701 in NC_016002


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  200 bits (742),  Expect = 7e-53, Method: Compositional matrix adjust.
 Identities = 107/238 (45%), Positives = 159/238 (67%), Gaps = 6/238 (2%)

Query  11   MYHHVSPSKGLVTVSPATFEAQMRWLAEHGWTTLSTGDFAGFLAGRPVPDKSVLVTFDDG  70
            MYHHVS   GLVT+SP TF  QM+WLAE+ W TLS++++  F  G  +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPVLERFGQRATLFTITGWIGDGAVRPHAASGQALPDTPDHKACKRAVDEGR  130
            YLDNW    P+L+ F  +A +F IT+ IG+G+VR  ++   +      H+ C + +  G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADTVMMRWSEIEAARAAGTFEFHSHTHSHARWDKLCASAAEKRDRLAEDLATSRRTLTER  190
            AD VM+RWSE++    +G  EFH HTH+H+RWDK  +S  E+  +L +DL ++R  L   
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKM  174

Query  191  LGGVSDHLCWPQGYFDDDYLDVARAAGFRHLYTVDKHINTATTDPRRIGRIVTKEADD  248
             G  S HLCWP+GY++ DY+++A   GF+ LYT ++++N+++ +  RIGRI TK ++ 
Sbjct  175  TGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTKVTGK  232

62) Bphyt_2104 in NC_010681


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 107/256 (42%), Positives = 165/256 (65%), Gaps = 15/256 (5%)

Query  12   MYHHVSTSPGMITVSPEHFAAQMAYLAGAGYTTIGSAQLSAYLAGEPLPKKAVVLTFDDG  71
            MYHHVS  PG++T+SPE F  QM  LA     T++S +L  +  G  LP+K+V+LTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  72   YLDNWVHAHPVLQAHGLTALCFLVTSWIGEGPVRAHARSGGALPALLNHRDGELAIENGE  131
            YLDNW +  P+L+   L A  FL+TS IG+GPVR H+ +        +HRD E  I  G+
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVR-HSPGKE-----YSHRDCEHQIATGN  114

Query  132  PDRAILRWSEIDAMREAGTFEFHSHTHSHVRWDRVSANAEQKCAGLTRDLASARATFEQK  191
            +D  +LRWSE++ M ++G  EFH HTH+H RWD+  ++ E++C  L +DL S+R  + + 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKM  174

Query  192  LGAVSDHLCWPQGYHDEDYRRIAAEAGFRHFYTCETGSNYSGRNDGAARSITRLEVRDRP  251
             G  S HLCWP+GY + DY +IA E GF+ +YT E       R +++A++ TR+   +R 
Sbjct  175  TGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTER------RMNAPAKGTTRI---GRI  225

Query  252  ASWLASRLWVHTRPAI  267
            ++ ++++L++  + ++
Sbjct  226  STKVTGKLRMAEKTTF  241

63) BN117_1727 in NC_018828


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 95/216 (44%), Positives = 145/216 (68%), Gaps = 7/216 (3%)

Query  11   MYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDG  70
            MYHHV+   G+++ +PE F +Q+  LA    ++L++ E+  +  G+ +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWVYAHPILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGR  130
            YL+NW    P+L+   +KA +FLIT+++G+GP R  +G++ +      H +  + IA+G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADEVMLRWSEVQAMLAAGTFEVHSHTHTHTRWDKQCGPDVAAKRAHIAQELADSRRALQA  190
            AD+VMLRWSEV+ ML +G  E H HTHTHTRWDK+  +    +  H+ Q+L  +R  L+ 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSR-EEQCKHLRQDLLSGREYLKK  173

Query  191  RLGEVSDHLCWPQGYFDADYVQAARDAGFRYLYTTD  226
              G  S HLCWP+GY++ DY+Q A + GF+YLYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

64) BN112_1202 in NC_019382


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  169 bits (625),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 94/216 (44%), Positives = 144/216 (67%), Gaps = 7/216 (3%)

Query  11   MYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDG  70
            MYHHV+   G+++ +PE F +Q+  LA    ++L++ E+  +  G+ +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWVYAHPILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGR  130
            YL+NW    P+L+   +KA +FLIT+++G+GP R  +G++ +      H +  + IA+G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADEVMLRWSEVQAMLAAGTFEVHSHTHTHTRWDKQCGPDVAAKRAHIAQELADSRRALQA  190
            AD+VMLRWSEV+ ML +G  E H HTHTHTRWDK+  +    +  H+ Q+L  +R  L+ 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSR-EEQCKHLRQDLLSGREYLKK  173

Query  191  RLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTD  226
              G  S HLCWP+GY++ DY+Q A + GF+ LYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

65) BB3399 in NC_002927


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  169 bits (625),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 94/216 (44%), Positives = 144/216 (67%), Gaps = 7/216 (3%)

Query  11   MYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDG  70
            MYHHV+   G+++ +PE F +Q+  LA    ++L++ E+  +  G+ +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWVYAHPILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGR  130
            YL+NW    P+L+   +KA +FLIT+++G+GP R  +G++ +      H +  + IA+G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADEVMLRWSEVQAMLAAGTFEVHSHTHTHTRWDKQCGPDVAAKRAHIAQELADSRRALQA  190
            AD+VMLRWSEV+ ML +G  E H HTHTHTRWDK+  +    +  H+ Q+L  +R  L+ 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSR-EEQCKHLRQDLLSGREYLKK  173

Query  191  RLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTD  226
              G  S HLCWP+GY++ DY+Q A + GF+ LYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

66) BPP1709 in NC_002928


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  169 bits (625),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 94/216 (44%), Positives = 144/216 (67%), Gaps = 7/216 (3%)

Query  11   MYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDG  70
            MYHHV+   G+++ +PE F +Q+  LA    ++L++ E+  +  G+ +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWVYAHPILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGR  130
            YL+NW    P+L+   +KA +FLIT+++G+GP R  +G++ +      H +  + IA+G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADEVMLRWSEVQAMLAAGTFEVHSHTHTHTRWDKQCGPDVAAKRAHIAQELADSRRALQA  190
            AD+VMLRWSEV+ ML +G  E H HTHTHTRWDK+  +    +  H+ Q+L  +R  L+ 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSR-EEQCKHLRQDLLSGREYLKK  173

Query  191  RLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTD  226
              G  S HLCWP+GY++ DY+Q A + GF+ LYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

67) BN115_3186 in NC_018829


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  168 bits (623),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 94/216 (44%), Positives = 144/216 (67%), Gaps = 7/216 (3%)

Query  11   MYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLGGAPVPEKSVLITFDDG  70
            MYHHV+   G+++ +PE F +Q+  LA    ++L++ E+  +  G+ +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWVYAHPILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGR  130
            YL+NW    P+L+   +KA +FLIT+++G+GP R  +G++ +      H +  + IA+G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADEVMLRWSEVQAMLAAGTFEVHSHTHTHTRWDKQCGPDVAAKRAHIAQELADSRRALQA  190
            AD+VMLRWSEV+ ML +G  E H HTHTHTRWDK+  +    +  H+ Q+L  +R  L+ 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSR-EEQCKHLRQDLLSGREYLKK  173

Query  191  RLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTD  226
              G  S HLCWP+GY++ DY+Q A + GF+ LYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

68) BN118_2255 in NC_018518


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 94/216 (44%), Positives = 144/216 (67%), Gaps = 7/216 (3%)

Query  11   MYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDG  70
            MYHHV+   G+++ +PE F +Q+  LA    ++L++ E+  +  G+ +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWVYAHPILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGR  130
            YL+NW    P+L+   +KA +FLIT+++G+GP R  +G++ +      H +  + IA+G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADEVMLRWSEVQAMLAAGTFEVHSHTHTHTRWDKQCGPDVAAKRAHIVQELADSRRALQA  190
            AD+VMLRWSEV+ ML +G  E H HTHTHTRWDK+  +    +  H+ Q+L  +R  L+ 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSR-EEQCKHLRQDLLSGREYLKK  173

Query  191  RLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTD  226
              G  S HLCWP+GY++ DY+Q A + GF+ LYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

69) BPTD_2289 in NC_017223


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 94/216 (44%), Positives = 144/216 (67%), Gaps = 7/216 (3%)

Query  11   MYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDG  70
            MYHHV+   G+++ +PE F +Q+  LA    ++L++ E+  +  G+ +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWVYAHPILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGR  130
            YL+NW    P+L+   +KA +FLIT+++G+GP R  +G++ +      H +  + IA+G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADEVMLRWSEVQAMLAAGTFEVHSHTHTHTRWDKQCGPDVAAKRAHIVQELADSRRALQA  190
            AD+VMLRWSEV+ ML +G  E H HTHTHTRWDK+  +    +  H+ Q+L  +R  L+ 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSR-EEQCKHLRQDLLSGREYLKK  173

Query  191  RLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTD  226
              G  S HLCWP+GY++ DY+Q A + GF+ LYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

70) BP2330 in NC_002929


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 94/216 (44%), Positives = 144/216 (67%), Gaps = 7/216 (3%)

Query  11   MYHHVTPAGGMIAATPEVFERQIAALARAGYRSLGTAEFAAYLDGAPVPEKSVLITFDDG  70
            MYHHV+   G+++ +PE F +Q+  LA    ++L++ E+  +  G+ +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWVYAHPILQRHGMKAVLFLITGLLGDGPARPCAGQDGPLPPAPDHDESKRLIAAGR  130
            YL+NW    P+L+   +KA +FLIT+++G+GP R  +G++ +      H +  + IA+G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  ADEVMLRWSEVQAMLAAGTFEVHSHTHTHTRWDKQCGPDVAAKRAHIVQELADSRRALQA  190
            AD+VMLRWSEV+ ML +G  E H HTHTHTRWDK+  +    +  H+ Q+L  +R  L+ 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSR-EEQCKHLRQDLLSGREYLKK  173

Query  191  RLGEVSDHLCWPQGYFDADYVQAARDAGFRHLYTTD  226
              G  S HLCWP+GY++ DY+Q A + GF+ LYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

71) PT7_0505 in NC_015458


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  165 bits (611),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 96/213 (46%), Positives = 143/213 (68%), Gaps = 7/213 (3%)

Query  11   MYHHISPVEGMITASPANFEDQLLWLKRRGYRSLSSDEFAGHLKGVPVPAKSVLITFDDG  70
            MYHH+S   G++T SP  F  Q+ WL     ++LSSDE+    +G  +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAYPLLKKYGFTALVFLVTSWMHDGPVRNRLGQGELPETPSHKVCEDRIENGRS  130
            YLDNW   YPLL+ + + A +FL+TS + +GPVR+  G+       SH+ CE++I  G +
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEY-----SHRDCEHQIATGNA  115

Query  131  DEVALRWSEIKAMREDGVMEFHSHTHTHTRWD--LIEPSGKNTHIaeelalsraalqaql  188
            D+V LRWSE++ M + G++EFH HTHTHTRWD  +     +  H+ ++L  +R  L+   
Sbjct  116  DNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMT  175

Query  189  GSVSEHFCWPQGYFDPDYVRLAQEADFRYLYTT  221
            G  S H+CWP+GY++ DY+++A+E +F+YLYTT
Sbjct  176  GKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTT  208

72) Bpet3116 in NC_010170


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  165 bits (610),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 143/216 (67%), Gaps = 7/216 (3%)

Query  11   MYHHVTPSGGMIAVTPKVFEQQIAGLARAGYTSLGTEQLAAYLAGGRVPEKSVLITFDDG  70
            MYHHV+   G+++++P  F +Q+  LA     +L++++L  +  GG++P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLNNWTYAHPVLQRYGMKAVLFLVTGWAGQGPVRPHAGQGVALPASPEHHETKRLVAEGR  130
            YL+NW    P+L+ + +KA +FL+T+  G+GPVR  +G+  +      H++  + +A G 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  131  TDDVIVRWSEAQAMVAAGTFEIHSHTHTHTRWDKQCGADVAAKRDHIARELADSRAALTE  190
            +D+V++RWSE + M+ +G  E+H HTHTHTRWDK+  +    +  H+ ++L  +R  L  
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKK-FTSREEQCKHLRQDLLSGREYLKK  173

Query  191  YLGAASDHLCWPQGYFDDDYVRAAREAGFRHLYTTD  226
              G  S HLCWP+GY++ DY++ A E GF+ LYTT+
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

73) BAV2237 in NC_010645


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  164 bits (606),  Expect = 4e-42, Method: Compositional matrix adjust.
 Identities = 100/214 (47%), Positives = 144/214 (68%), Gaps = 5/214 (2%)

Query  12   MYHHITPEGGMIAATPEVFEAQIASLAAAGYQSLSADQFAAYLAGGEVPEKSVLITFDDG  71
            MYHH++   G+++ +PE F  Q+  LA    ++LS+D++  +  GG +P KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  72   YLNNWVHAHPVLKRHGMKAVIFLITGLIGDGPARPSPGQALPADVDHDTSKRLIAAGRAD  131
            YL+NW +  P+L+   +KA IFLIT++IG+GP R SPG+    +  H    + IA+G AD
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGK----EYSHRDCEHQIATGNAD  116

Query  132  EVMLRWSEVRAMIEAGtfefhshththtRWDKECGADVSAKRRHIAQELDDSRATLIERL  191
            +VMLRWSEV  M+++G  EFH HTHTHTRWDK   +    + +H+ Q+L  +R  L    
Sbjct  117  NVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKK-FTSREEQCKHLRQDLLSGREYLKKMT  175

Query  192  GSVSDHLCWPQGYFDADYLQAAREAGFRHLYTTD  225
            G  S HLCWP+GY++ DY+Q A E GF+ LYTT+
Sbjct  176  GKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

74) Bxe_A2153 in NC_007951


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  163 bits (604),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 103/256 (41%), Positives = 160/256 (63%), Gaps = 15/256 (5%)

Query  12   MYHHVSTSPGMITVSPDHFaaqmaylaaaGYTTIGSAQLSAYLAGEPLPNKSVVLTFDDG  71
            MYHHVS  PG++T+SP+ F  QM  LA     T++S +L  +  G  LP KSV+LTFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  72   YLDNWVHAHPVLQAHGFTALCFLVTSWIGEGPVRAHARSGGAMPALLDHRQGELAIENGE  131
            YLDNW +  P+L+   + A  FL+TS IG+GPVR H+ +         HR+ E  I  G+
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVR-HSPGKE-----YSHRDCEHQIATGN  114

Query  132  PDRAILRWSEIHAMREAGTFEFHSHTHSHVRWDRVSAHADQKCAGLSRDLAIARAMLEQR  191
            +D  +LRWSE++ M ++G  EFH HTH+H RWD+  +  +++C  L +DL  +R  L + 
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKM  174

Query  192  LGAVSDHLCWPQGYHDEDYRRIAAQAGFRHFYTCEPGSNYVGRNDGAARSITRLEVRNKP  251
             G  S HLCWP+GY + DY +IA + GF+ +YT E       R +++A++ TR+    + 
Sbjct  175  TGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTER------RMNAPAKGTTRI---GRI  225

Query  252  ASWLASRLWVHTRPTI  267
            ++ ++++L++  + T+
Sbjct  226  STKVTGKLRMAEKTTF  241

75) XF1469 in NC_002488


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  161 bits (596),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 93/217 (43%), Positives = 143/217 (66%), Gaps = 8/217 (3%)

Query  11   MHHHVSPSTGMISVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPRKSIVITFDDG  70
            M HHVS   G++++SPE F  Q+ WLA++ W +L+ ++   F  G  +PRKS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYHMHAVVFIVTSWIGDGPARPHAGQSGAILPITPNHHECETAILHE  130
            YLDNW    P+L+ +++ A +F++TS IG+GP R  +G+  +       H++CE  I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS-------HRDCEHQI-AT  112

Query  131  GRTDEVMLRWSEVQAMIAAGTFEAHCHTHTHTRWLTLQLSRAQRREGLDRDLITARTVLQ  190
            G +D+VMLRWSEV+ M+ +G  E H HTHTHTRW     SR ++   L +DL+++R  L+
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLK  172

Query  191  QRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTH  227
            +  G+ S+ LCWP G ++ D I+IA   GF+Y+ TT+
Sbjct  173  KMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

76) Xfasm12_0811 in NC_010513


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  160 bits (589),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 93/217 (43%), Positives = 142/217 (66%), Gaps = 8/217 (3%)

Query  11   MHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDG  70
            M HHVS   G++T+SPE F  Q+ WLA++ W +L+ ++   F  G  +P+KS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYHMHAVVFIVTSWIGDGPARPHAGQSGAILPTTPNHHACETAILHE  130
            YLDNW    P+L+ +++ A +F++TS IG+GP R  +G+  +       H+ CE  I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS-------HRDCEHQI-AT  112

Query  131  GRTDEVMLRWSEVQAMIAAGTFEAHCHTHTHTRWLTLQLSRAQRREGLDRDLITARTVLQ  190
            G +D+VMLRWSEV+ M+ +G  E H HTHTHTRW     SR ++   L +DL+++R  L+
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLK  172

Query  191  QRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTH  227
            +  G+ S+ LCWP G ++ D I+IA   GF+Y+ TT+
Sbjct  173  KMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

77) XFLM_09025 in NC_017562


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 92/217 (43%), Positives = 142/217 (66%), Gaps = 8/217 (3%)

Query  11   MHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDG  70
            M HHVS   G++T+SPE F  Q+ WLA++ W +L+ ++   F  G  +P+KS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNHHACETAILHE  130
            YLDNW    P+L+ +++ A +F++TS I++GP R  +G+  +       H+ CE  I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS-------HRDCEHQI-AT  112

Query  131  GRTDEVMLRWSEVQAMIAAGTFEAHCHTHTHTRWLTLQLSRAQRREGLDRDLITARTVLQ  190
            G +D+VMLRWSEV+ M+ +G  E H HTHTHTRW     SR ++   L +DL+++R  L+
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLK  172

Query  191  QRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTH  227
            +  G+ S+ LCWP G ++ D I+IA   GF+Y+ TT+
Sbjct  173  KMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

78) XfasM23_0722 in NC_010577


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 92/217 (43%), Positives = 142/217 (66%), Gaps = 8/217 (3%)

Query  11   MHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDG  70
            M HHVS   G++T+SPE F  Q+ WLA++ W +L+ ++   F  G  +P+KS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNHHACETAILHE  130
            YLDNW    P+L+ +++ A +F++TS I++GP R  +G+  +       H+ CE  I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS-------HRDCEHQI-AT  112

Query  131  GRTDEVMLRWSEVQAMIAAGTFEAHCHTHTHTRWLTLQLSRAQRREGLDRDLITARTVLQ  190
            G +D+VMLRWSEV+ M+ +G  E H HTHTHTRW     SR ++   L +DL+++R  L+
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLK  172

Query  191  QRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTH  227
            +  G+ S+ LCWP G ++ D I+IA   GF+Y+ TT+
Sbjct  173  KMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

79) PD0687 in NC_004556


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 92/217 (43%), Positives = 142/217 (66%), Gaps = 8/217 (3%)

Query  11   MHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDG  70
            M HHVS   G++T+SPE F  Q+ WLA++ W +L+ ++   F  G  +P+KS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNHHACETAILHE  130
            YLDNW    P+L+ +++ A +F++TS I++GP R  +G+  +       H+ CE  I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS-------HRDCEHQI-AT  112

Query  131  GRTDEVMLRWSEVQAMIAAGTFEAHCHTHTHTRWLTLQLSRAQRREGLDRDLITARTVLQ  190
            G +D+VMLRWSEV+ M+ +G  E H HTHTHTRW     SR ++   L +DL+++R  L+
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLK  172

Query  191  QRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTH  227
            +  G+ S+ LCWP G ++ D I+IA   GF+Y+ TT+
Sbjct  173  KMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

80) BurJV3_2862 in NC_015947


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  158 bits (583),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 93/218 (43%), Positives = 137/218 (63%), Gaps = 9/218 (4%)

Query  11   MHHHVSNSPGMITVSPENFESQIAWLARTGWTSLTLDQYADFLAGKPVPRKSIVITFDDG  70
            M HHVS+ PG++T+SPE F  Q+ WLA   W +L+ D+   F  G  +PRKS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYGMHAVVFVVTGWMHEGPVRPHAGIEGAELPVTPEHRACEDLIYKQ  130
            YLDNW    P+L+ + + A +F++T+ + +GPVR  +G E +       HR CE+ I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS-------HRDCEHQI-AT  112

Query  131  GRSDEVMMRWSEARAAIEAGTFEVHCHTHSHTRWLKRDDLDRAQRREGISGDLAMARQTL  190
            G +D+VM+RWSE    +++G  E H HTH+HTRW K+    R ++   +  DL  +R+ L
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFT-SREEQCKHLRQDLLSGREYL  171

Query  191  LEKLGEVSDTLCWPYGDFDDDYIEVAREQGFRYLHTTH  228
                G  S  LCWP G ++ DYI++A E GF+YL TT+
Sbjct  172  KKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

81) Smlt3412 in NC_010943


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  157 bits (580),  Expect = 5e-40, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 137/218 (63%), Gaps = 9/218 (4%)

Query  11   MHHHVSNSPGMITVSPENFESQIAWLARTGWTSLTLDQYAGFLAGKPVPRKSIVITFDDG  70
            M HHVS+ PG++T+SPE F  Q+ WLA   W +L+ D+   F  G  +PRKS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYGMHAVVFVVTGWMHEGPIRPHAGIEGAELPATPEHRACEDLIYKQ  130
            YLDNW    P+L+ + + A +F++T+ + +GP+R  +G E +       HR CE+ I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS-------HRDCEHQI-AT  112

Query  131  GRSDEVMMRWSEARAAIEAGTFEVHCHTHSHTRWLKRDDLDRAQRREGISGDLAMAKQTL  190
            G +D+VM+RWSE    +++G  E H HTH+HTRW K+    R ++   +  DL  +++ L
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFT-SREEQCKHLRQDLLSGREYL  171

Query  191  LEKLGEVSDTLCWPYGDFDDDYIEVAREQGFRYLHTTH  228
                G  S  LCWP G ++ DYI++A E GF+YL TT+
Sbjct  172  KKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

82) Smal_2837 in NC_011071


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  156 bits (576),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 136/218 (63%), Gaps = 9/218 (4%)

Query  11   MHHHVSNSPGMITVSPENFESQIAWLARTGWTSLTLDQYAGFLAGKPVPRKSIVITFDDG  70
            M HHVS+ PG++T+SPE F  Q+ WLA   W +L+ D+   F  G  +PRKS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYGMHAVVFVVTGWMHEGPARPHAGIEGAQLPATPEHRACEDLIYKQ  130
            YLDNW    P+L+ + + A +F++T+ + +GP R  +G E +       HR CE+ I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS-------HRDCEHQI-AT  112

Query  131  GRSDEVMMRWSEARAAIEAGTFEVHCHTHSHTRWLKRDDLDRAQRREGISGDLAMAKQTL  190
            G +D+VM+RWSE    +++G  E H HTH+HTRW K+    R ++   +  DL  +++ L
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFT-SREEQCKHLRQDLLSGREYL  171

Query  191  LEKLGEVSDTLCWPYGDFDDDYIEVAREQGFRYLHTTH  228
                G  S  LCWP G ++ DYI++A E GF+YL TT+
Sbjct  172  KKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

83) Daro_0156 in NC_007298


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  150 bits (551),  Expect = 9e-38, Method: Compositional matrix adjust.
 Identities = 107/233 (46%), Positives = 152/233 (66%), Gaps = 5/233 (2%)

Query  11   MYHHISPKPGLVTCSPENFRAHMQWLAENGWKTLSTDEFTRILATGEVPKKSVLVTFDDG  70
            MYHH+S  PGLVT SPE FR +M+WLAEN WKTLS+DE+  +   G +P+KSV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPVLKEFGQRATLFLITGWMGEGEVRPHAGQPDVPDVPTHAQAMAAAAEGKL  130
            YLDNW    P+L+EF  +A +FLIT+ +G+G VR  +G+       +H +     A G+ 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEY-----SHRDCEHQIATGNA  115

Query  131  DDAFLRWSEVEAMRDAGtfdfhshththtRWDRTIadqsardqaladdlaasratlaarl  190
            D+  LRWSEV+ M ++G  +FH HTHTHTRWD+ ++ +  + + L +DL ++R  L    
Sbjct  116  DNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMT  175

Query  191  GVDSPHLCWPQGYFDAAYQRVARAAGFTHLYTTEHGVVRREVDPGRIPRLVIK  243
            G  S HLCWP+GY++  Y ++A   GF  LYTTE+ +     +  RI R+  K
Sbjct  176  GKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTERRMNAPAKGTTRIGRISTK  228

84) SMD_2987 in NC_017671


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  144 bits (529),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 92/218 (43%), Positives = 134/218 (62%), Gaps = 9/218 (4%)

Query  11   MHHHVSPSPGMITVSPENFESQIAWLAGNGWTSLTLDQYAGFLAGKPVPRKSIVITFDDG  70
            M HHVS  PG++T+SPE F  Q+ WLA N W +L+ D+   F  G  +PRKS+++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  71   YLDNWVYAHPILQKYGMHAVVFVVTGWMGEGPERPHAGLAGATLPATPDHRGCEAAIYEQ  130
            YLDNW    P+L+ + + A +F++T+ +G+GP R  +G           HR+CE  I   
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPG-------KEYSHRDCEHQI-AT  112

Query  131  NRSDDVMMRWSEARAAIAAGTFEVHCHTHTHTrwlrrddldraqrraGLSHDLAVSRNVL  190
              +D+VM+RWSE    + +G  E H HTHTHTRW ++      Q +  L +DL  +R+ L
Sbjct  113  GNADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKH-LRQDLLSGREYL  171

Query  191  QDKLGEVSDTLCWPYGDFDQDHIEVAREHGFRYLHTTH  228
            +   G  S  LCWP G +++D I++A E GF+YL TT+
Sbjct  172  KKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTE  209

85) AXYL_02010 in NC_014640


> AF326777|31|G24|15808720|AAL08449.1|Shigella_flexneri_2a_YSH6000|-|32621..33388|shf|-|putative 
protein Shf
Length=255

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 99/246 (41%), Positives = 156/246 (64%), Gaps = 8/246 (3%)

Query  10   MYHHVTPAGGMIAATPEVFEVQIARLARAGYQSLSADQFAAYLAGGAAPERSVLITFDDG  69
            MYHHV+   G+++ +PE F  Q+ +LA    ++LS+D++  +  GG  P +SV++TFDDG
Sbjct  1    MYHHVSHCPGLVTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDG  60

Query  70   YLNNWVHAHPVLARHGMRAVLFTITGWIGDGPVRPHAGQGGPLPATPDHDACKQLVATGR  129
            YL+NW +  P+L    ++A +F IT+ IG+GPVR  +G+  +      H  C + +ATG 
Sbjct  61   YLDNWFQVYPLLNEFNLKAHIFLITSFIGNGPVRHSPGKEYS------HRDCEHQIATGN  114

Query  130  ADEAMLRWSEIEAMQAAGtfefhshththtRWDKVCGADEDAKRAHIAQELQDSRDTLTR  189
            AD+ MLRWSE++ M  +G  EFH HTHTHTRWDK   + E+  + H+ Q+L  +R+ L +
Sbjct  115  ADNVMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCK-HLRQDLLSGREYLKK  173

Query  190  RLGAVSDHLCWPQGyfdadyvaaaraagfrHLYTTDPFGQNTPGADPEHIYRFAVRNQGG  249
              G  S HLCWP+GY++ DY+  A   GF+ LYTT+    N+P+ +  +I R++ +  G 
Sbjct  174  MTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTER-RMNAPAKGTTRIGRISTKVTGK  232

Query  250  SWLNRR  255
             ++  +
Sbjct  233  LRMAEK  238