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Homologs of STY0319 gene of NC_003198_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SeD_A0310
( YP_002214241.1 )

Rhs family protein

NC_011205
(Salmonella enterica CT_02021853)

0.0

2) STY0319
( NP_454896.1 )

Rhs-family protein

NC_003198
(Salmonella enterica CT18)

0.0

100

3) STBHUCCB_27240
( YP_005218238.1 )

Rhs-family protein

NC_016832
(Salmonella enterica P-stx-12)

0.0

100

4) t2571
( NP_806290.1 )

Rhs-family protein

NC_004631
(Salmonella enterica Ty2)

0.0

100

5) TY21A_13050
( YP_007926865.1 )

Rhs-family protein

NC_021176
(Salmonella enterica Ty21a)

0.0

100

6) SNSL254_A0319
( YP_002039526.1 )

Rhs family protein

NC_011080
(Salmonella enterica SL254)

0.0

100

7) SN31241_12820
( YP_008359199.1 )

Rhs element Vgr

NC_021902
(Salmonella enterica USMARC-S3124.1)

0.0

100

8) SE451236_07460
( YP_008264541.1 )

type VI secretion protein Vgr

NC_021820
(Salmonella enterica 08-1736)

0.0

9) STM14_0338
( YP_005235960.1 )

putative cytoplasmic protein

NC_016856
(Salmonella enterica 14028S)

0.0

10) vrgS
( YP_005395794.1 )

type VI secretion protein

NC_017046
(Salmonella enterica 798)

0.0

11) CFSAN001921_15960
( YP_008256538.1 )

type VI secretion protein Vgr

NC_021814
(Salmonella enterica CFSAN001921)

0.0

12) STMMW_02941
( YP_005231367.1 )

putative type VI system protein

NC_016854
(Salmonella enterica D23580)

0.0

13) STM0289
( NP_459287.1 )

hypothetical protein

NC_003197
(Salmonella enterica LT2)

0.0

14) vrgS
( YP_005180218.1 )

Type VI secretion protein

NC_016810
(Salmonella enterica SL1344)

0.0

15) STM474_0301
( YP_005241233.1 )

Rhs-family protein

NC_016857
(Salmonella enterica ST4/74)

0.0

16) STMDT12_C02840
( YP_005245980.1 )

putative cytoplasmic protein

NC_016860
(Salmonella enterica T000240)

0.0

17) STU288_13300
( YP_007903753.1 )

putative cytoplasmic protein

NC_021151
(Salmonella enterica U288)

0.0

18) STMUK_0292
( YP_005250852.1 )

putative cytoplasmic protein

NC_016863
(Salmonella enterica UK-1)

0.0

19) SeSA_A0322
( YP_002113306.1 )

Rhs-family protein

NC_011094
(Salmonella enterica CVM19633)

0.0

20) SFV_0314
( YP_687893.1 )

Rhs family protein

NC_008258
(Shigella flexneri 8401)

0.0

21) SFxv_0279
( YP_005725904.1 )

putative Rhs-family protein

NC_017328
(Shigella flexneri 2002017)

0.0

22) rhsG
( NP_836003.1 )

Rhs-family protein

NC_004741
(Shigella flexneri 2457T)

0.0

23) SF0265
( NP_706218.1 )

Rhs-family protein

NC_004337
(Shigella flexneri 301)

0.0

24) CFSAN002050_07990
( YP_008259533.1 )

type VI secretion protein Vgr

NC_021818
(Salmonella enterica CFSAN002050)

0.0

25) SC0282
( YP_215269.1 )

Rhs-family protein

NC_006905
(Salmonella enterica SC-B67)

0.0

26) SPC_0298
( YP_002635927.1 )

Rhs family protein

NC_012125
(Salmonella enterica RKS4594)

0.0

27) SSPA2307
( YP_002143152.1 )

hypothetical protein

NC_011147
(Salmonella enterica AKU12601)

0.0

28) SPA2471
( YP_151660.1 )

hypothetical protein

NC_006511
(Salmonella enterica ATCC 9150)

0.0

29) CFSAN002050_08035
( YP_008259542.1 )

type VI secretion protein Vgr

NC_021818
(Salmonella enterica CFSAN002050)

0.0

30) SEEH1578_10555
( YP_008246178.1 )

VgrG protein

NC_021810
(Salmonella enterica 41578)

0.0

31) SU5_0932
( YP_006086575.1 )

VgrG protein

NC_017623
(Salmonella enterica B182)

0.0

32) CFSAN002069_07690
( YP_008250373.1 )

type VI secretion protein Vgr

NC_021812
(Salmonella enterica CFSAN002069)

0.0

33) SeHA_C0329
( YP_002044274.1 )

Rhs family protein

NC_011083
(Salmonella enterica SL476)

0.0

34) cts1G
( YP_003366298.1 )

VgrG family T6SS protein Cts1G

NC_013716
(Citrobacter rodentium ICC168)

6e-123

35) YE105_C1603
( YP_004297802.1 )

hypothetical protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-119

36) YPDSF_2036
( YP_001163390.1 )

hypothetical protein

NC_009381
(Yersinia pestis Pestoides F)

2e-118

37) vgrG2
( NP_993767.1 )

hypothetical protein

NC_005810
(Yersinia pestis 91001)

3e-118

38) Bphy_6124
( YP_001862227.1 )

ImpA family type VI secretion-associated protein

NC_010625
(Burkholderia phymatum STM815)

4e-116

39) Bpet0519
( YP_001629122.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

8e-108

40) Acav_3369
( YP_004235838.1 )

ImpA family type VI secretion-associated protein

NC_015138
(Acidovorax avenae ATCC 19860)

5e-105

41) Daci_3868
( YP_001564884.1 )

ImpA family type VI secretion-associated protein

NC_010002
(Delftia acidovorans SPH-1)

5e-104

42) DelCs14_2955
( YP_004488317.1 )

ImpA family type VI secretion-associated protein

NC_015563
(Delftia sp. Cs1-4)

8e-104

43) Acav_0662
( YP_004233152.1 )

ImpA family type VI secretion-associated protein

NC_015138
(Acidovorax avenae ATCC 19860)

9e-104

44) Acav_3676
( YP_004236140.1 )

ImpA family type VI secretion-associated protein

NC_015138
(Acidovorax avenae ATCC 19860)

2e-103

45) Aave_3486
( YP_971815.1 )

Rhs element Vgr protein

NC_008752
(Acidovorax citrulli AAC00-1)

1e-102

46) Acav_3111
( YP_004235580.1 )

ImpA family type VI secretion-associated protein

NC_015138
(Acidovorax avenae ATCC 19860)

8e-103

47) Aave_2127
( YP_970481.1 )

Rhs element Vgr protein

NC_008752
(Acidovorax citrulli AAC00-1)

2e-102

48) Aave_2735
( YP_971077.1 )

Rhs element Vgr protein

NC_008752
(Acidovorax citrulli AAC00-1)

2e-102

49) Aave_4009
( YP_972324.1 )

Rhs element Vgr protein

NC_008752
(Acidovorax citrulli AAC00-1)

6e-102

50) Aave_2047
( YP_970404.1 )

Rhs element Vgr protein

NC_008752
(Acidovorax citrulli AAC00-1)

3e-101

51) Aave_3752
( YP_972073.1 )

Rhs element Vgr protein

NC_008752
(Acidovorax citrulli AAC00-1)

8e-101

52) Varpa_2908
( YP_004155210.1 )

type VI secretion system vgr family protein

NC_014931
(Variovorax paradoxus EPS)

3e-98

53) Daci_4483
( YP_001565497.1 )

ImpA family type VI secretion-associated protein

NC_010002
(Delftia acidovorans SPH-1)

9e-97

54) DelCs14_0306
( YP_004485702.1 )

ImpA family type VI secretion-associated protein

NC_015563
(Delftia sp. Cs1-4)

9e-97

55) DelCs14_2325
( YP_004487698.1 )

ImpA family type VI secretion-associated protein

NC_015563
(Delftia sp. Cs1-4)

4e-96

56) PT7_0359
( YP_004415523.1 )

hypothetical protein

NC_015458
(Pusillimonas sp. T7-7)

1e-95

57) Daci_0300
( YP_001561331.1 )

ImpA family type VI secretion-associated protein

NC_010002
(Delftia acidovorans SPH-1)

2e-95

58) Varpa_2907
( YP_004155209.1 )

type VI secretion system vgr family protein

NC_014931
(Variovorax paradoxus EPS)

7e-95

59) Daci_0698
( YP_001561729.1 )

ImpA family type VI secretion-associated protein

NC_010002
(Delftia acidovorans SPH-1)

1e-93

60) TKWG_21505
( YP_006380972.1 )

Rhs element Vgr family protein 4

NC_017964
(Advenella kashmirensis WT001)

3e-91

61) Aave_3783
( YP_972103.1 )

Rhs element Vgr protein

NC_008752
(Acidovorax citrulli AAC00-1)

2e-90

62) Mesci_6369
( YP_004134519.1 )

type VI secretion system vgr family protein

NC_014918
(Mesorhizobium ciceri WSM1271)

6e-82

63) USDA257_c28440
( YP_006398172.1 )

hypothetical protein

NC_018000
(Sinorhizobium fredii USDA 257)

1e-81

• Sequence Alignments

1) SeD_A0310 in NC_011205


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1064 bits (4035),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 673/677 (99%), Positives = 677/677 (100%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavadGPGAHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVA+GPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWLKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPW+KLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGAGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLG+GNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPSGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGP+GQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLPTSE  729
            GGTAVTADDIAPLPTSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

2) STY0319 in NC_003198


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1059 bits (4013),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 677/677 (100%), Positives = 677/677 (100%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLPTSE  729
            GGTAVTADDIAPLPTSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

3) STBHUCCB_27240 in NC_016832


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1059 bits (4013),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 677/677 (100%), Positives = 677/677 (100%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLPTSE  729
            GGTAVTADDIAPLPTSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

4) TY21A_13050 in NC_021176


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1059 bits (4013),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 677/677 (100%), Positives = 677/677 (100%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLPTSE  729
            GGTAVTADDIAPLPTSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

5) t2571 in NC_004631


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1059 bits (4013),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 677/677 (100%), Positives = 677/677 (100%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLPTSE  729
            GGTAVTADDIAPLPTSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

6) SNSL254_A0319 in NC_011080


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1058 bits (4012),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 677/677 (100%), Positives = 677/677 (100%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLPTSE  729
            GGTAVTADDIAPLPTSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

7) SN31241_12820 in NC_021902


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1058 bits (4012),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 677/677 (100%), Positives = 677/677 (100%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLPTSE  729
            GGTAVTADDIAPLPTSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

8) SE451236_07460 in NC_021820


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSTCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENS+CWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

9) STM14_0338 in NC_016856


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSTCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENS+CWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

10) vrgS in NC_017046


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSTCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENS+CWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

11) STMMW_02941 in NC_016854


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSTCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENS+CWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

12) STM0289 in NC_003197


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

13) vrgS in NC_016810


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSTCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENS+CWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

14) STM474_0301 in NC_016857


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSTCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENS+CWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

15) STMDT12_C02840 in NC_016860


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

16) STU288_13300 in NC_021151


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

17) STMUK_0292 in NC_016863


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSTCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENS+CWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

18) CFSAN001921_15960 in NC_021814


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1055 bits (3999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/677 (99%), Positives = 676/677 (99%), Gaps = 0/677 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGAL  112
            LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232
            HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652
            AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712
            TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPD  712

Query  713  GGTAVTADDIAPLLTSE  729
            GGTAVTADDIAPL TSE
Sbjct  713  GGTAVTADDIAPLPTSE  729

19) SeSA_A0322 in NC_011094


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score = 1036 bits (3928),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 679/730 (94%), Positives = 704/730 (97%), Gaps = 1/730 (0%)

Query  1    MSFVSTNNKSgmgglttttppitgENsgttagsvagsvagaaeaaveQALGSLMGDLPEP  60
            MSFVSTNNKSGMGGLTTTTPPITGE++G TA+SVAGSVA+AAEAAVEQA GSL G LPEP
Sbjct  1    MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPEP  60

Query  61   SGLVKaavaaaaqaaaaagaaQDVISALISGATSGPGAHNVTVSGSAVPPQMLLFSSLNG  120
            SGLVKAAVAAA  AAAA+ A + V SA++S+ ++GPGAHNVTVSGSAVPP  LLF+SL+G
Sbjct  61   SGLVKAAVAAAQAAAAAGMAQDAV-SAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDG  119

Query  121  SEALGSLFTYIVQLKTPDTLNLGYVSPAANLPLKAMVGKDLCVNIELDGGGKRHISGLVT  180
            +E+L+ LF+Y+VQLKTPDTLNLGYVSPAANLPLK+MVGKDLCVNIELDGGGKRHISGLVT
Sbjct  120  GETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISGLVT  179

Query  181  AARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVE  240
            AARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVE
Sbjct  180  AARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVE  239

Query  241  SYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISTHHACPDSPEVE  300
            SYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAIS+H ACPDSP VE
Sbjct  240  SYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVE  299

Query  301  WHQKGLKLDKAFIHTIIANESLRTGQWVLDDFDFKKPRSRLANTVANPRETGHASYEHYE  360
            WHQ GLKLDK FIHTI ANESLRTGQWVLDDFDF KPRS LANTVANPRETGHA+YEHYE
Sbjct  300  WHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYE  359

Query  361  WPGDYFDKGEGEMLTRIRMEAQRSPGSRVHGAGNIRTLMTGYTFALMNHPTAELNQEYLL  420
            WPGDYFDK+EGEMLTRIRMEAQRSPGSRV G+GNIRTLMTGYTF+L N PTAE+NQEYLL
Sbjct  360  WPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLL  419

Query  421  AQTTLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQ  480
             QT LFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQ
Sbjct  420  MQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQ  479

Query  481  EIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNG  540
            EIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNG
Sbjct  480  EIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNG  539

Query  541  DPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFH  600
            DPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFH
Sbjct  540  DPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFH  599

Query  601  AEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTT  660
            AEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTT
Sbjct  600  AEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTT  659

Query  661  YRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA  720
            YRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA
Sbjct  660  YRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA  719

Query  721  DDIAPLPTSE  730
            DDIAPLPTSE
Sbjct  720  DDIAPLPTSE  729

20) SFV_0314 in NC_008258


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  988 bits (3746),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 620/734 (85%), Positives = 677/734 (93%), Gaps = 5/734 (0%)

Query  1    MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGaaeemaeqaaaDLFGALPE  60
            MSFVST NK+ G GG   TTPPI+GESGG++++S    V++AAE   EQAA+ LFGALPE
Sbjct  1    MSFVSTNNKS-GMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPE  59

Query  61   PSGLVKaavaaaqaaaaaaGISDMagavqdaaaslaagapgaHNVTVSGSAVPPQMLLFA  120
            PSGLVKAAVAAAQAAA     ++MA     A  S  AG+PGAHNVTVSGSAVPP  LLFA
Sbjct  60   PSGLVKAAVAAAQAAA----AAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFA  115

Query  121  GMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLMVGKDLCVSIELDGGGKRYIS  180
            +++G+E L++LFSY VQLKT D+LNLGYVSPAANLPL+ MVGKDLCV+IELDGGGKR IS
Sbjct  116  SLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHIS  175

Query  181  GLVTAARVVGHEGRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK  240
            GLVTAARVVGHEGRSVTYELR+EPW+KLLTHTSDYKAFQNKTVVDILDEVL EY++PVEK
Sbjct  176  GLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEK  235

Query  241  RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDS  300
            RLVE+YP R+WQVQYGETDFDF+QRLMQEWGIYWWFEHSE+SHTLVL DAI++HKACPDS
Sbjct  236  RLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDS  295

Query  301  PLVEWHQEGLKLDKEFIHTITASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEY  360
            PLVEWHQEGLKLDKEFIHTITA+E LRTG+WV+DDFDF KPRSLL +TVA+PR+TGHA Y
Sbjct  296  PLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATY  355

Query  361  EHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIRTLMTGYTFTLMNHPTAEINQ  420
            EHYEWPGDYF  +EGEMLTRIRMEAQRSPGSR  G+G+IRTLMTGYTFTL N PTAE+NQ
Sbjct  356  EHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQ  415

Query  421  EYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG  480
            EYLL+QT LF++DNAQHSGQDQHFT+ T FELHPT EV+RPQRT+SKPHTKGPQSAIVTG
Sbjct  416  EYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTG  475

Query  481  PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  540
            PAGQEIWTD+YGRVKVQFGWDRYGK DENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD
Sbjct  476  PAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  535

Query  541  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEE  600
            FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSL GGPTNGNMLRFDDKTGAEE
Sbjct  536  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEE  595

Query  601  VKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGEDRNATITKNDGLSVKLAQTIN  660
            VKFHAEKDLNTTVKNNETHTVMVDR KTI+KNET S+GEDRN+T+TKNDGLSVKLAQTIN
Sbjct  596  VKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTIN  655

Query  661  VGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT  720
            +GTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQL+LHTSDVMQLIG GIDMNPDGGT
Sbjct  656  IGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGT  715

Query  721  AMTADDIAPLPTPD  734
            A+TADDIAPLPT++
Sbjct  716  AVTADDIAPLPTSE  729

21) SFxv_0279 in NC_017328


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  987 bits (3742),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 619/734 (85%), Positives = 677/734 (93%), Gaps = 5/734 (0%)

Query  1    MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGaaeemaeqaaaDLFGALPE  60
            MSFVST NK+ G GG   TTPPI+GESGG++++S    V++AAE   EQAA+ LFGALPE
Sbjct  1    MSFVSTNNKS-GMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPE  59

Query  61   PSGLVKaavaaaqaaaaaaGISDMagavqdaaaslaagapgaHNVTVSGSAVPPQMLLFA  120
            PSGLVKAAVAAAQAAA     ++MA     A  S  AG+PGAHNVTVSGSAVPP  LLFA
Sbjct  60   PSGLVKAAVAAAQAAA----AAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFA  115

Query  121  GMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLMVGKDLCVSIELDGGGKRYIS  180
            +++G+E L++LFSY VQLKT D+LNLGYVSPAANLPL+ MVGKDLCV+IELDGGGKR IS
Sbjct  116  SLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHIS  175

Query  181  GLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK  240
            GLVTAARVVGHE+RSVTYELR+EPW+KLLTHTSDYKAFQNKTVVDILDEVL EY++PVEK
Sbjct  176  GLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEK  235

Query  241  RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDS  300
            RLVE+YP R+WQVQYGETDFDF+QRLMQEWGIYWWFEHSE+SHTLVL DAI++HKACPDS
Sbjct  236  RLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDS  295

Query  301  PLVEWHQEGLKLDKEFIHTITASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEY  360
            PLVEWHQEGLKLDKEFIHTITA+E LRTG+WV+DDFDF KPRSLL +TVA+PR+TGHA Y
Sbjct  296  PLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATY  355

Query  361  EHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIRTLMTGYTFTLMNHPTAEINQ  420
            EHYEWPGDYF  +EGEMLTRIRMEAQRSPGSR  G+G+IRTLMTGYTFTL N PTAE+NQ
Sbjct  356  EHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQ  415

Query  421  EYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG  480
            EYLL+QT LF++DNAQHSGQDQHFT+ T FELHPT EV+RPQRT+SKPHTKGPQSAIVTG
Sbjct  416  EYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTG  475

Query  481  PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  540
            PAGQEIWTD+YGRVKVQFGWDRYGK DENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD
Sbjct  476  PAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  535

Query  541  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEE  600
            FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSL GGPTNGNMLRFDDKTGAEE
Sbjct  536  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEE  595

Query  601  VKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGEDRNATITKNDGLSVKLAQTIN  660
            VKFHAEKDLNTTVKNNETHTVMVDR KTI+KNET S+GEDRN+T+TKNDGLSVKLAQTIN
Sbjct  596  VKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTIN  655

Query  661  VGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT  720
            +GTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQL+LHTSDVMQLIG GIDMNPDGGT
Sbjct  656  IGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGT  715

Query  721  AMTADDIAPLPTPD  734
            A+TADDIAPLPT++
Sbjct  716  AVTADDIAPLPTSE  729

22) rhsG in NC_004741


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  987 bits (3742),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 619/734 (85%), Positives = 677/734 (93%), Gaps = 5/734 (0%)

Query  1    MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGaaeemaeqaaaDLFGALPE  60
            MSFVST NK+ G GG   TTPPI+GESGG++++S    V++AAE   EQAA+ LFGALPE
Sbjct  1    MSFVSTNNKS-GMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPE  59

Query  61   PSGLVKaavaaaqaaaaaaGISDMagavqdaaaslaagapgaHNVTVSGSAVPPQMLLFA  120
            PSGLVKAAVAAAQAAA     ++MA     A  S  AG+PGAHNVTVSGSAVPP  LLFA
Sbjct  60   PSGLVKAAVAAAQAAA----AAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFA  115

Query  121  GMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLMVGKDLCVSIELDGGGKRYIS  180
            +++G+E L++LFSY VQLKT D+LNLGYVSPAANLPL+ MVGKDLCV+IELDGGGKR IS
Sbjct  116  SLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHIS  175

Query  181  GLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK  240
            GLVTAARVVGHE+RSVTYELR+EPW+KLLTHTSDYKAFQNKTVVDILDEVL EY++PVEK
Sbjct  176  GLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEK  235

Query  241  RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDS  300
            RLVE+YP R+WQVQYGETDFDF+QRLMQEWGIYWWFEHSE+SHTLVL DAI++HKACPDS
Sbjct  236  RLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDS  295

Query  301  PLVEWHQEGLKLDKEFIHTITASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEY  360
            PLVEWHQEGLKLDKEFIHTITA+E LRTG+WV+DDFDF KPRSLL +TVA+PR+TGHA Y
Sbjct  296  PLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATY  355

Query  361  EHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIRTLMTGYTFTLMNHPTAEINQ  420
            EHYEWPGDYF  +EGEMLTRIRMEAQRSPGSR  G+G+IRTLMTGYTFTL N PTAE+NQ
Sbjct  356  EHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQ  415

Query  421  EYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG  480
            EYLL+QT LF++DNAQHSGQDQHFT+ T FELHPT EV+RPQRT+SKPHTKGPQSAIVTG
Sbjct  416  EYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTG  475

Query  481  PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  540
            PAGQEIWTD+YGRVKVQFGWDRYGK DENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD
Sbjct  476  PAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  535

Query  541  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEE  600
            FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSL GGPTNGNMLRFDDKTGAEE
Sbjct  536  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEE  595

Query  601  VKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGEDRNATITKNDGLSVKLAQTIN  660
            VKFHAEKDLNTTVKNNETHTVMVDR KTI+KNET S+GEDRN+T+TKNDGLSVKLAQTIN
Sbjct  596  VKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTIN  655

Query  661  VGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT  720
            +GTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQL+LHTSDVMQLIG GIDMNPDGGT
Sbjct  656  IGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGT  715

Query  721  AMTADDIAPLPTPD  734
            A+TADDIAPLPT++
Sbjct  716  AVTADDIAPLPTSE  729

23) SF0265 in NC_004337


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  987 bits (3742),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 619/734 (85%), Positives = 677/734 (93%), Gaps = 5/734 (0%)

Query  1    MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGaaeemaeqaaaDLFGALPE  60
            MSFVST NK+ G GG   TTPPI+GESGG++++S    V++AAE   EQAA+ LFGALPE
Sbjct  1    MSFVSTNNKS-GMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPE  59

Query  61   PSGLVKaavaaaqaaaaaaGISDMagavqdaaaslaagapgaHNVTVSGSAVPPQMLLFA  120
            PSGLVKAAVAAAQAAA     ++MA     A  S  AG+PGAHNVTVSGSAVPP  LLFA
Sbjct  60   PSGLVKAAVAAAQAAA----AAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFA  115

Query  121  GMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLMVGKDLCVSIELDGGGKRYIS  180
            +++G+E L++LFSY VQLKT D+LNLGYVSPAANLPL+ MVGKDLCV+IELDGGGKR IS
Sbjct  116  SLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHIS  175

Query  181  GLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK  240
            GLVTAARVVGHE+RSVTYELR+EPW+KLLTHTSDYKAFQNKTVVDILDEVL EY++PVEK
Sbjct  176  GLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEK  235

Query  241  RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDS  300
            RLVE+YP R+WQVQYGETDFDF+QRLMQEWGIYWWFEHSE+SHTLVL DAI++HKACPDS
Sbjct  236  RLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDS  295

Query  301  PLVEWHQEGLKLDKEFIHTITASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEY  360
            PLVEWHQEGLKLDKEFIHTITA+E LRTG+WV+DDFDF KPRSLL +TVA+PR+TGHA Y
Sbjct  296  PLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATY  355

Query  361  EHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIRTLMTGYTFTLMNHPTAEINQ  420
            EHYEWPGDYF  +EGEMLTRIRMEAQRSPGSR  G+G+IRTLMTGYTFTL N PTAE+NQ
Sbjct  356  EHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQ  415

Query  421  EYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG  480
            EYLL+QT LF++DNAQHSGQDQHFT+ T FELHPT EV+RPQRT+SKPHTKGPQSAIVTG
Sbjct  416  EYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTG  475

Query  481  PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  540
            PAGQEIWTD+YGRVKVQFGWDRYGK DENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD
Sbjct  476  PAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  535

Query  541  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEE  600
            FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSL GGPTNGNMLRFDDKTGAEE
Sbjct  536  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEE  595

Query  601  VKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGEDRNATITKNDGLSVKLAQTIN  660
            VKFHAEKDLNTTVKNNETHTVMVDR KTI+KNET S+GEDRN+T+TKNDGLSVKLAQTIN
Sbjct  596  VKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTIN  655

Query  661  VGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT  720
            +GTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQL+LHTSDVMQLIG GIDMNPDGGT
Sbjct  656  IGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGT  715

Query  721  AMTADDIAPLPTPD  734
            A+TADDIAPLPT++
Sbjct  716  AVTADDIAPLPTSE  729

24) CFSAN002050_07990 in NC_021818


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  910 bits (3448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 581/730 (80%), Positives = 640/730 (88%), Gaps = 11/730 (1%)

Query  1    MSFVSTGNKSAGNGGPVITTPPITGESGDMSTGSVATGVadaaeqmaeqaaaeLFGALPE  60
            MSFVST NKS G GG   TTPPITGESG+++++SVA +VADAAE   EQAA+ LFGALPE
Sbjct  1    MSFVSTNNKS-GMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPE  59

Query  61   PSGLVKaavtaaqaaaaaagisdivsaaqdtaaslaaGGPGAHNVTVSGSAVPPQMLLFA  120
            PSGLVKAAV+AAQAAAAA+   D VSA   + A    GGPGAHNVTVSGSAVPP  LLFA
Sbjct  60   PSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVA----GGPGAHNVTVSGSAVPPGALLFA  115

Query  121  GINGSEKLGSLFTYIVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHIS  180
            +++G+E L+ LF+Y+VQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHIS
Sbjct  116  SLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHIS  175

Query  181  GLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEK  240
            GLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEK
Sbjct  176  GLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEK  235

Query  241  RLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDS  300
            RLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDS
Sbjct  236  RLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDS  295

Query  301  PLVEWHQEGLKLDKEFIHTITASERLRTGQWVLDDFDFKKPRSRLANTVADPRETGHANY  360
            PLVEWHQEGLKLDKEFIHTITA+E LRTGQWVLDDFDF KPRS LANTVA+PRETGHA Y
Sbjct  296  PLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATY  355

Query  361  EHYEWPGDYFDKGEGEMLTRIRMEAQRSPGSRVHGAGNIRTLMTGYSFTLTNHPTAEVNQ  420
            EHYEWPGDYFDK+EGEMLTRIRMEAQRSPGSRV G+GNIRTLMTGY+FTL N PTAEVNQ
Sbjct  356  EHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQ  415

Query  421  EYLLVQTTLFVRDNAQHSGQEQHFTYVSTFELHPTREVYRPQRTIDKPHTKGPQSAIVTG  480
            EYLL+QT LFV+DNAQHSGQ+QHFT+ + FELHPTREV+RPQRT+ KPHTKGPQSAIVTG
Sbjct  416  EYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTG  475

Query  481  PSGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  540
            P+GQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD
Sbjct  476  PAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD  535

Query  541  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEE  600
            FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEE
Sbjct  536  FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEE  595

Query  601  VKFHAEKDLNTTVKNNETHTVNADRTKTIIHNEITKVHIDRTEDVFGKHTETIKGNRNVK  660
            VKFHAEKDLNTTVKNNETHTV  DRTKTII NE   +  DR   V  ++  ++K  + ++
Sbjct  596  VKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTIN  655

Query  661  VTKGDQLLTVEKGIREVTVKTGTSTETVEKDISITSISGAIHLTAKTQITLTVGKSSLTM  720
            +    +L   +    + T++ G ++  ++KD SI   +  + L +   + L +GK ++ M
Sbjct  656  IGTTYRLDVGD----QFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQL-IGK-GIDM  709

Query  721  NSDGTITLNG  730
            N+DG  ++ +
Sbjct  710  NPDGGTAVTA  719

25) SC0282 in NC_006905


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  897 bits (3399),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 612/685 (90%), Positives = 638/685 (94%), Gaps = 0/685 (0%)

Query  1    MSFVSTNNKSGMRGLTTTTPPITGEsggvtadsvagsvadaaeaaveqaagsLFGALPEP  60
            MSFVSTNNKSGM GLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPEP
Sbjct  1    MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPEP  60

Query  61   SGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGALLFASLDGG  120
            SGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGG
Sbjct  61   SGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGG  120

Query  121  ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRQISGLVTA  180
            ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR+ISGLVTA
Sbjct  121  ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISGLVTA  180

Query  181  ARVVGHEGRSVTYELHMEPWLKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES  240
            ARVVGHEGRSVTYEL+MEPW+KLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES
Sbjct  181  ARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES  240

Query  241  YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW  300
            YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW
Sbjct  241  YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW  300

Query  301  HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW  360
            HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW
Sbjct  301  HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW  360

Query  361  PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM  420
            PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM
Sbjct  361  PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM  420

Query  421  QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE  480
            QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE
Sbjct  421  QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE  480

Query  481  IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD  540
            IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD
Sbjct  481  IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD  540

Query  541  PDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPGSEEVWLHA  600
            PDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G+EEV +HA
Sbjct  541  PDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHA  600

Query  601  EKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNKTIQTVKEL  660
            EKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +TI+     
Sbjct  601  EKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTY  660

Query  661  YLAAGDSITLSCGDTVLYMSSKGEF  685
             L  GD +TL CG++ L +   G +
Sbjct  661  RLDVGDQFTLRCGNAALVLHKDGSI  685

26) SPC_0298 in NC_012125


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  896 bits (3394),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 611/685 (90%), Positives = 637/685 (93%), Gaps = 0/685 (0%)

Query  1    MSFVSTNNKSGMRGLTTTTPPITGEsggvtadsvagsvadaaeaaveqaagsLFGALPEP  60
            MSFVSTNNKSGM GLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPEP
Sbjct  1    MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPEP  60

Query  61   SGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGALLFASLDGG  120
            SGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGG
Sbjct  61   SGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGG  120

Query  121  ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRQISGLVTA  180
            ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR+ISGLVTA
Sbjct  121  ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISGLVTA  180

Query  181  ARVVGHEGRSVTYELHMEPWLKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES  240
            ARVVGHEGRSVTYEL+MEPW+KLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES
Sbjct  181  ARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES  240

Query  241  YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW  300
            YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW
Sbjct  241  YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW  300

Query  301  HQEGLKLDKAFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW  360
            HQEGLKLDK FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW
Sbjct  301  HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW  360

Query  361  PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM  420
            PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM
Sbjct  361  PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM  420

Query  421  QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE  480
            QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE
Sbjct  421  QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE  480

Query  481  IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD  540
            IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD
Sbjct  481  IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD  540

Query  541  PDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPGSEEVWLHA  600
            PDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G+EEV +HA
Sbjct  541  PDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHA  600

Query  601  EKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNKTIQTVKEL  660
            EKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +TI+     
Sbjct  601  EKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTY  660

Query  661  YLAAGDSITLSCGDTVLYMSSKGEF  685
             L  GD +TL CG++ L +   G +
Sbjct  661  RLDVGDQFTLRCGNAALVLHKDGSI  685

27) SSPA2307 in NC_011147


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  888 bits (3364),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 565/689 (83%), Positives = 614/689 (90%), Gaps = 4/689 (0%)

Query  1    MSFVSTGNKTVGSDRPAITTPPIVGENKGvssdavvasvtdaaEQMAEQAVESLFGDLPE  60
            MSFVST NK+ G +  + TTPPI GE+ GV++D+V +SV+DAAE   EQA  SLFG LPE
Sbjct  1    MSFVSTNNKS-GMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPE  59

Query  61   PSGLvkaavaaaqatavaaGISDIAGAAQDVMSSLISGPGVHNVTVSGSAVPPQMLLFAS  120
            PSGLVKAAVAAAQA+A A+   D  +A   ++S++ +GPG HNVTVSGSAVPP  LLFAS
Sbjct  60   PSGLVKAAVAAAQAAAAAGMAQDAVSA---IVSAVAGGPGAHNVTVSGSAVPPGALLFAS  116

Query  121  LNGSEALGTLFTYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISG  180
            L+G+E+L+ LF+YVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISG
Sbjct  117  LDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISG  176

Query  181  LVTAARVVGHEGRSVTYELRMEPWLKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKR  240
            LVTAARVVGHEGRSVTYELRMEPW+KLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKR
Sbjct  177  LVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKR  236

Query  241  LVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSP  300
            LVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSP
Sbjct  237  LVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSP  296

Query  301  LVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYE  360
            LVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYE
Sbjct  297  LVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYE  356

Query  361  HYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQE  420
            HYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQE
Sbjct  357  HYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQE  416

Query  421  YLLMQTLLFVQDNAQHSGQNQHFTFSTRFELHPTREVYRPQRTISKPHTKGPQSAIVTGP  480
            YLLMQTLLFVQDNAQHSGQ+QHFTFSTRFELHPTREV+RPQRT+SKPHTKGPQSAIVTGP
Sbjct  417  YLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGP  476

Query  481  AGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDF  540
            AGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDF
Sbjct  477  AGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDF  536

Query  541  KNGDPDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPGSEEV  600
            KNGDPDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G+EEV
Sbjct  537  KNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEV  596

Query  601  WLHAEKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNKTIQT  660
             +HAEKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +TI+ 
Sbjct  597  KFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINI  656

Query  661  VKELYLAAGDSITLSCGDTVLYMSSKGEF  689
                 L  GD +TL CG++ L +   G +
Sbjct  657  GTTYRLDVGDQFTLRCGNAALVLHKDGSI  685

28) SPA2471 in NC_006511


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  888 bits (3364),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 565/689 (83%), Positives = 614/689 (90%), Gaps = 4/689 (0%)

Query  1    MSFVSTGNKTVGSDRPAITTPPIVGENKGvssdavvasvtdaaEQMAEQAVESLFGDLPE  60
            MSFVST NK+ G +  + TTPPI GE+ GV++D+V +SV+DAAE   EQA  SLFG LPE
Sbjct  1    MSFVSTNNKS-GMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPE  59

Query  61   PSGLvkaavaaaqatavaaGISDIAGAAQDVMSSLISGPGVHNVTVSGSAVPPQMLLFAS  120
            PSGLVKAAVAAAQA+A A+   D  +A   ++S++ +GPG HNVTVSGSAVPP  LLFAS
Sbjct  60   PSGLVKAAVAAAQAAAAAGMAQDAVSA---IVSAVAGGPGAHNVTVSGSAVPPGALLFAS  116

Query  121  LNGSEALGTLFTYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISG  180
            L+G+E+L+ LF+YVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISG
Sbjct  117  LDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISG  176

Query  181  LVTAARVVGHEGRSVTYELRMEPWLKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKR  240
            LVTAARVVGHEGRSVTYELRMEPW+KLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKR
Sbjct  177  LVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKR  236

Query  241  LVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSP  300
            LVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSP
Sbjct  237  LVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSP  296

Query  301  LVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYE  360
            LVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYE
Sbjct  297  LVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYE  356

Query  361  HYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQE  420
            HYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQE
Sbjct  357  HYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQE  416

Query  421  YLLMQTLLFVQDNAQHSGQNQHFTFSTRFELHPTREVYRPQRTISKPHTKGPQSAIVTGP  480
            YLLMQTLLFVQDNAQHSGQ+QHFTFSTRFELHPTREV+RPQRT+SKPHTKGPQSAIVTGP
Sbjct  417  YLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGP  476

Query  481  AGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDF  540
            AGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDF
Sbjct  477  AGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDF  536

Query  541  KNGDPDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPGSEEV  600
            KNGDPDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G+EEV
Sbjct  537  KNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEV  596

Query  601  WLHAEKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNKTIQT  660
             +HAEKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +TI+ 
Sbjct  597  KFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINI  656

Query  661  VKELYLAAGDSITLSCGDTVLYMSSKGEF  689
                 L  GD +TL CG++ L +   G +
Sbjct  657  GTTYRLDVGDQFTLRCGNAALVLHKDGSI  685

29) CFSAN002050_08035 in NC_021818


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  879 bits (3330),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 614/685 (90%), Positives = 639/685 (94%), Gaps = 0/685 (0%)

Query  1    MSFVSTNNKSDMgglttttppitgesggvtadsvagsvadaaeaaveqaagsLFGALPEP  60
            MSFVSTNNKS+MGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPEP
Sbjct  1    MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPEP  60

Query  61   SGLVKaavaaaqaaaaagmaqdavsaivsavaggpgaHNVTVSGSAVPPGALLFASLDGG  120
            SGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGG
Sbjct  61   SGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGG  120

Query  121  ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISGLVTA  180
            ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISGLVTA
Sbjct  121  ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISGLVTA  180

Query  181  ARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES  240
            ARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES
Sbjct  181  ARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES  240

Query  241  YPVRAWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW  300
            YPVR+WQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW
Sbjct  241  YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW  300

Query  301  HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW  360
            HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW
Sbjct  301  HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW  360

Query  361  PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM  420
            PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM
Sbjct  361  PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM  420

Query  421  QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE  480
            QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE
Sbjct  421  QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE  480

Query  481  IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD  540
            IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD
Sbjct  481  IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD  540

Query  541  PDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPGSEEVWLHA  600
            PDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G+EEV +HA
Sbjct  541  PDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHA  600

Query  601  EKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNKTIQTVKEL  660
            EKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +TI+     
Sbjct  601  EKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTY  660

Query  661  YLAAGDSITLSCGDTVLYMSSKGEF  685
             L  GD +TL CG++ L +   G +
Sbjct  661  RLDVGDQFTLRCGNAALVLHKDGSI  685

30) SEEH1578_10555 in NC_021810


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  872 bits (3304),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 555/633 (88%), Positives = 582/633 (92%), Gaps = 1/633 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaagmaqda-vsaivsavaggpgaHNVTVSGSAVPPGAL  111
            LFGALPEPSGLVKAAVAAAQAAAA+   +  VSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  112  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  171
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  172  HISGLVTAARVVGHEGRSVTYELRMEPWLKLLTHTSDYKAFQNKSVVDILDEVLAEYPYP  231
            HISGLVTAARVVGHEGRSVTYELRMEPW+KLLTHTSDYKAFQNK+VVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  232  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  291
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  292  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  351
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  352  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  411
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  412  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  471
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  472  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  531
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  532  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPG  591
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  592  SEEVWLHAEKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNK  651
            +EEV +HAEKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  652  TIQTVKELYLAAGDSITLSCGDTVLYMSSKGEF  684
            TI+      L  GD +TL CG++ L +   G +
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSI  685

31) SU5_0932 in NC_017623


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  872 bits (3304),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 555/633 (88%), Positives = 582/633 (92%), Gaps = 1/633 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaagmaqda-vsaivsavaggpgaHNVTVSGSAVPPGAL  111
            LFGALPEPSGLVKAAVAAAQAAAA+   +  VSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  112  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  171
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  172  HISGLVTAARVVGHEGRSVTYELRMEPWLKLLTHTSDYKAFQNKSVVDILDEVLAEYPYP  231
            HISGLVTAARVVGHEGRSVTYELRMEPW+KLLTHTSDYKAFQNK+VVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  232  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  291
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  292  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  351
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  352  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  411
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  412  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  471
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  472  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  531
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  532  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPG  591
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  592  SEEVWLHAEKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNK  651
            +EEV +HAEKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  652  TIQTVKELYLAAGDSITLSCGDTVLYMSSKGEF  684
            TI+      L  GD +TL CG++ L +   G +
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSI  685

32) CFSAN002069_07690 in NC_021812


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  872 bits (3304),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 555/633 (88%), Positives = 582/633 (92%), Gaps = 1/633 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaagmaqda-vsaivsavaggpgaHNVTVSGSAVPPGAL  111
            LFGALPEPSGLVKAAVAAAQAAAA+   +  VSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  112  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  171
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  172  HISGLVTAARVVGHEGRSVTYELRMEPWLKLLTHTSDYKAFQNKSVVDILDEVLAEYPYP  231
            HISGLVTAARVVGHEGRSVTYELRMEPW+KLLTHTSDYKAFQNK+VVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  232  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  291
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  292  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  351
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  352  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  411
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  412  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  471
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  472  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  531
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  532  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPG  591
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  592  SEEVWLHAEKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNK  651
            +EEV +HAEKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  652  TIQTVKELYLAAGDSITLSCGDTVLYMSSKGEF  684
            TI+      L  GD +TL CG++ L +   G +
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSI  685

33) SeHA_C0329 in NC_011083


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  872 bits (3304),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 555/633 (88%), Positives = 582/633 (92%), Gaps = 1/633 (0%)

Query  53   LFGALPEPSGLVKaavaaaqaaaagmaqda-vsaivsavaggpgaHNVTVSGSAVPPGAL  111
            LFGALPEPSGLVKAAVAAAQAAAA+   +  VSAIVSAVAGGPGAHNVTVSGSAVPPGAL
Sbjct  53   LFGALPEPSGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGAL  112

Query  112  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  171
            LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR
Sbjct  113  LFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKR  172

Query  172  HISGLVTAARVVGHEGRSVTYELRMEPWLKLLTHTSDYKAFQNKSVVDILDEVLAEYPYP  231
            HISGLVTAARVVGHEGRSVTYELRMEPW+KLLTHTSDYKAFQNK+VVDILDEVLAEYPYP
Sbjct  173  HISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYP  232

Query  232  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  291
            VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC
Sbjct  233  VEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKAC  292

Query  292  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  351
            PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH
Sbjct  293  PDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGH  352

Query  352  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  411
            ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE
Sbjct  353  ATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAE  412

Query  412  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  471
            VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI
Sbjct  413  VNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAI  472

Query  472  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  531
            VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV
Sbjct  473  VTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEV  532

Query  532  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGAATQSGIYSHTIGGGPTNANALRFEDKPG  591
            LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPG A+QSGI+SH++ GGPTN+N LRF+DK G
Sbjct  533  LVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTG  592

Query  592  SEEVWLHAEKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKVQYDDTSLAGGNK  651
            +EEV +HAEKD    V+NNE+H V  +R K I ++E  +IG  R+  V  +D       +
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  652  TIQTVKELYLAAGDSITLSCGDTVLYMSSKGEF  684
            TI+      L  GD +TL CG++ L +   G +
Sbjct  653  TINIGTTYRLDVGDQFTLRCGNAALVLHKDGSI  685

34) Bxe_B1281 in NC_007952


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  453 bits (1707),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 281/658 (43%), Positives = 428/658 (66%), Gaps = 30/658 (4%)

Query  8    RTLTVSGAMLPTLPDGEPALQLRAIAGEETLSTIYEYELSLVTPVDSLLP-DSTAANFDL  66
            + +TVSG+ +P       AL + ++ G ETLS ++ Y + L TP    L   S AAN+ L
Sbjct  98   HNVTVSGSAVPP-----GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  67   KEMIGGELTVTIQLDGMGTFVPgmagasgaanfgagMREISGIVTAASLVSQLNRQYLYR  126
            K M+G +L V I+LDG G                   R+ISG+VTAA +V++  R   Y 
Sbjct  153  KPMVGKDLCVNIELDGGG------------------KRHISGLVTAARVVGHEGRSVTYE  194

Query  127  LKMQPWIVLAERRTDYRIFQNKTVVEIIDEVLKSNYLYSYVKRLGGRYSNLVYQVQYGES  186
            L+M+PW+ L  + +DY+ FQNKTVV+I+DEVL ++Y Y+  KRL   Y+    QVQYGE+
Sbjct  195  LRMEPWVKLLTHTSDYKAFQNKTVVDILDEVL-AEYPYPVEKRLVESYPVRTWQVQYGET  253

Query  187  DFAFIQRLMAEHGIYWFFEHSRSFHRMVLVDNLGAHKPVESLAYQTLWYYPPGHKIDREY  246
            DF F+QRLM E GIYW FEHS   H +VL D ++AHK+    +    W    G K+D+E+
Sbjct  254  DFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVE-WH-QEGLKLDKEF  311

Query  247  IEEFQTTDCIQSGVWTTDDFDFTQPGADLAVKNALPQKTAHNRLSVYEWPGDYTDAKDGA  306
            I+ + + + +++G W  DDFDFT+P + LA   A P+ T+H     YEWPGDY D  +G 
Sbjct  312  IHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGE  371

Query  307  QFARVRMEEIRARGERATGRGHLRNVVCGTTFTLAGYPQEAANREYLVIGAKLLAEETGE  366
             ++R+RME  R+ G R  G G++R ++ G TFTL  YP    N+EYL++ + L+ ++ ++
Sbjct  372  MLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQ  431

Query  367  QTGAGQ-YRIDTTFELQPATTMFRAPRTVAKPRTTGPQTAIVTGPPGQEIWTDRYGRVKL  425
            ++G +Q + + T FEL+P+  +FR+ RTV+KP+T GPQ+AIVTGP+GQEIWTD+YGRVK+
Sbjct  432  HSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKV  491

Query  426  KFHWDHSPVNDQNSSCWVRVSYPWAGSNFGGVNIPRVGQEVIVDFENGDPDRPIVTGRVF  485
            +F WD+    D+NSSCW+RVSYPWAG  FG ++IPR+GQEV+VDF NGDPD PI+ GR +
Sbjct  492  QFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTY  551

Query  486  NAASMPPWELPGNATQSGMLSRSMKGHYGTANAIRFEDKEGAEELWLQAERDMRTEVEND  545
            N  +MPPW LPG A+QSG++S+S+ G    +N +RF+DK GAEE+ ++AE+D+ T V N+
Sbjct  552  NQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNN  611

Query  546  ALHTVGNDRVRTVARNELVTIGDTRQRCVKADDGTLVGKDRVVEVLNNLLCAAGDSITLS  605
              HTV  DR +T+ +NE  +IG+ R+  V  +DG  V   + +++        GD +TL 
Sbjct  612  ETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLR  671

Query  606  CGDSIIELKSNGEINVTCNNFNITAKQSGKINAQAGNLDLNMGG--KQEGVAPHGSGE  661
            CG++ + L  +G I+   +++ + + +  ++ +++ +++ + G     +++AP  ++E
Sbjct  672  CGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTADDIAPLPTSE  729

35) BC1002_6247 in NC_014119


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  452 bits (1704),  Expect = 4e-128, Method: Compositional matrix adjust.
 Identities = 286/668 (43%), Positives = 435/668 (66%), Gaps = 58/668 (8%)

Query  30   SADGLTQPALQFMSLEGDESLGKLFEYELLLRTPDDYTVP-LAVSANLDLKALLGKEMTV  88
            S+ ++   AL F SL+G+E+L+ LF Y + L+TPD   +  ++ +ANL LK+++GK++ V
Sbjct  103  SGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCV  162

Query  89   AIDLEPSADPEAAQREITGLVAAAQYLRREGRYNVYRVVLKPWLWLATLTTDYKIFQNKT  148
             I+L+      +++R+I+GLV+AA+ + +EGR   Y + + PW+ L T T+DYK FQNKT
Sbjct  163  NIELD-----GGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKT  217

Query  149  VIEIIDEVLKDYPYPVEKRVDVSRYALDGESPTNEPRAFQVQYGETDYHFIQRLMEEWGI  208
            V++I+DEVL +YPYPVEKR+ V  Y++         R+ QVQYGETD++F+QRLM+EWGI
Sbjct  218  VVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGETDFDFLQRLMQEWGI  267

Query  209  YWFFEHADGKHRLVLCDHIGAHRQSPNSAYRTLAFQPQNGKTDTEYISAFSTAEVLCTGH  268
            YW FEH+++ H LVL D I+AH+  P+S+   +  + +  K D E+I ++++ E L TG+
Sbjct  268  YWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKEFIHTITANESLRTGQ  325

Query  269  YVTSDFDFTRSRADMRAINQQPRDTSWNLLERYDWPGDYTDSSHGELLARTRMEELRATG  328
             V  DFDFT++R+ +     +PR+T+    E+Y+WPGDY D S+GE+L+R RME  R+ G
Sbjct  326  WVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPG  385

Query  329  TRAQGKGNVRGLACGQTFVLTHYDYTAANCEYLVIGTELHLSGTPDESGSGYEYTCSNKF  388
            +R  G GN+R L  G TF L +Y  +  N EYL++ T L + + +++SG + ++T S +F
Sbjct  386  SRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRF  445

Query  389  DVQPTSEVFRLPRETSKPIVSGPQSAVVVGPEGKELWTDEFGRVKVRFAWDRYGRNVETD  448
            +++PT EVFR  R  SKP   GPQSA+V GP G+E+WTD++GRVKV+F+WDRYG+  E  
Sbjct  446  ELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENS  505

Query  449  SCWVRVSQAWAGQGFGGIYIPRIGQEVIVDFWNGDPDRPLITGSLYNTVTRPPYALPGNA  508
            SCW+RVS +WAG+GFG I IPRIGQEV+VDF NGDPD P+I G  YN  T PP +LPG A
Sbjct  506  SCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMA  565

Query  509  TQSGFMSRSMEGGLQNYNSIRFEDKAGAEEFTVQAERDMNRLTKLNESHVVGADYTIGVA  568
            +QSG+ S+S+ GG  N N +RF+DK+GAEE   +AE+D+N   K NE+H V  D T  + 
Sbjct  566  SQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTII  625

Query  569  AAHSMNVGAASSTVVGGKYSVRVKDVASYSVGLGQFVSIGGLEETAVGGAStltvggart  628
              ++ ++G   +T V  + ++ VK        L+Q ++I                     
Sbjct  626  KNETNSIGEDRNTTVTKNDGLSVK--------LAQTINI---------------------  656

Query  629  vtvggASTHAVGGAYSLSAGGVLSIVCGKSSLTMNKDGEIKLIGKSIRIQGDTRVVVQGT  688
                       G +Y L  G+ +++ CG+++L ++KDG I + GK + ++    + + G 
Sbjct  657  -----------GTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGK  705

Query  689  PLDLNPGD  696
             +D+NP++
Sbjct  706  GIDMNPDG  713

36) bglu_2g01490 in NC_012721


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  449 bits (1691),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 285/675 (43%), Positives = 439/675 (66%), Gaps = 58/675 (8%)

Query  12   SRTVSVTSAAIPQVLGHAALEFMAMEGSEELGKLFDYKVLLRTPDDYAIP-LAASANLGL  70
            ++ V+V+++A+P     +AL F +++G+E L+ LF Y V L+TPD   +  ++++ANL L
Sbjct  97   AHNVTVSGSAVPP----GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  71   SAMLGKELTVSIQLDapagaqgtaqgaVREITGLVTKSEFVRREGRFNVYRVTLKPWLWL  130
             +M+GK+L V+I+LD+ +          R+I+GLVT +  V +EGR   Y + + PW+ L
Sbjct  153  KPMVGKDLCVNIELDGGGK---------RHISGLVTAARVVGHEGRSVTYELRMEPWVKL  203

Query  131  ATLTTDYRIFQDKTVIEILDTILGEYPYPVEKRLDVSRYVLMGESERNEPRAYQVQYGES  190
             T T+DY+ FQ+KTV++ILD +L+EYPYPVEKRL V  Y +         R+ QVQYGE+
Sbjct  204  LTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGET  253

Query  191  DFRFMQRLMEEWGIYWFIEHSDGKQRLVLCDHIGAHRKSPNPAYQKLAFQPQEGKTDAEY  250
            DF F+QRLM+EWGIYW +EHS++ + LVL D I+AH+  P+++   +  + +  K D E+
Sbjct  254  DFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKEF  311

Query  251  ISAFSTAEMICPGSYLTNDFDFTWPRADLHAVNQQARDTDWNTFERYEWPGDYSDSSHGE  310
            I ++++ E +  G  + +DFDFT PR+ L     ++R+T+  T+E+YEWPGDY D S+GE
Sbjct  312  IHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGE  371

Query  311  LLARTRMEMLRAPGMRASGEGNLRGLACGQTFELINFDRTDANREYLVIGTELNVIGNPD  370
            +L+R RME  R+PG R  G GN+R L  G TF L N+  ++ N+EYL++ T L V +N++
Sbjct  372  MLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQ  431

Query  371  ESGSGYQYTFSNRFEVQPTSEVFRLPMATPKPFVSGPQSAIVVGPEGETLWTDEFGRVKV  430
            +SG + ++TFS RFE++PT EVFR   + +KP   GPQSAIV GP G+ +WTD++GRVKV
Sbjct  432  HSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKV  491

Query  431  HFAWDRYGRNAETDSCWVRVSQAWAGSNFGSIYIPRIGQEVIVDFWNGDPDRPLILGSLY  490
            +F+WDRYG+  E  SCW+RVS +WAG  FG I IPRIGQEV+VDF NGDPD P+I+G  Y
Sbjct  492  QFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTY  551

Query  491  NTLTPPPWDLPGNATQSGVMSRSINGGKQNFNAIRFEDKAGAEELLIQAERGMNRLTKLN  550
            N  T PPW+LPG A+QSG+ S+S+ GG  N N +RF+DK+GAEE+ ++AE+++N   K N
Sbjct  552  NQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNN  611

Query  551  ESLVVGIDFSVAVGAGYNVEVGGEINCNVLGMASYTVGLAHSLLvggaqttavagaSTLT  610
            E+  V +D + ++       +G + N  V    + +V LA+++                 
Sbjct  612  ETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTI-----------------  654

Query  611  VGGARSVTVGGASLHTVGGMYALTAGGEIAISSGKSSLTLCADGTIKLVGRTIRIQGDDR  670
                            +G  Y L  G+++++  G+++L L  DG+I + G+ + ++  D 
Sbjct  655  ---------------NIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDV  699

Query  671  VVVQGSPLDLNPGDA  685
            + + G  +D+NP+++
Sbjct  700  MQLIGKGIDMNPDGG  714

37) Bxe_A3024 in NC_007951


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  449 bits (1690),  Expect = 4e-127, Method: Compositional matrix adjust.
 Identities = 276/635 (44%), Positives = 416/635 (66%), Gaps = 28/635 (4%)

Query  8    RTLTVSGATLPTLPDGEPALQLRTIAGEETLSTIYEYELSLVTPVDPLLP-DSTAANFDL  66
            + +TVSG+++P       AL + ++ G ETLS ++ Y + L TP    L   S AAN+ L
Sbjct  98   HNVTVSGSAVPP-----GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  67   KEMIGGELTVTIQLDGMGTFVPgmagasgaanfgagMREISGIVTAASLVSQLNRQYLYR  126
            K M+G +L V I+LDG G                   R+ISG+VTAA +V++  R   Y 
Sbjct  153  KPMVGKDLCVNIELDGGG------------------KRHISGLVTAARVVGHEGRSVTYE  194

Query  127  LKMQPWIVLAERRTDYRIFQNKTVVEIIDEVLKSNYLYSYVKRLGGRYSNLVYQVQYGES  186
            L+M+PW+ L  + +DY+ FQNKTVV+I+DEVL ++Y Y+  KRL   Y+    QVQYGE+
Sbjct  195  LRMEPWVKLLTHTSDYKAFQNKTVVDILDEVL-AEYPYPVEKRLVESYPVRTWQVQYGET  253

Query  187  DFAFIQRLMAEHGIYWFFEHSRSFHRMVLVDNLGAHKPVESLAYQTLWYYPPGHKIDREY  246
            DF F+QRLM E GIYW FEHS   H +VL D ++AHK+    +    W    G K+D+E+
Sbjct  254  DFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVE-WH-QEGLKLDKEF  311

Query  247  IEEFQTTDCIQSGVWTTDDFDFTQPGADLAVKNALPQKTAHNRLSVYEWPGDYTDAKDGA  306
            I+ + + + +++G W  DDFDFT+P + LA   A P+ T+H     YEWPGDY D  +G 
Sbjct  312  IHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGE  371

Query  307  QFARVRMEEIRALGERATGRGHLRNVVCGTTFTLAGYPQEAANREYLVIGAKLLAEETGE  366
             ++R+RME  R+ G R  G G++R ++ G TFTL  YP    N+EYL++ + L+ ++ ++
Sbjct  372  MLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQ  431

Query  367  QTGAGQ-YRIDTTFEVQPATTMFRAPRTVAKPRTTGPQTAIVTGPPGQEIWTDRYGRVKL  425
            ++G +Q + + T FE++P+  +FR+ RTV+KP+T GPQ+AIVTGP+GQEIWTD+YGRVK+
Sbjct  432  HSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKV  491

Query  426  KFHWDHSPVNDQNSSCWVRVSYPWAGSNFGGVNIPRVGQEVIVDFENGDPDRPIVTGRVF  485
            +F WD+    D+NSSCW+RVSYPWAG  FG ++IPR+GQEV+VDF NGDPD PI+ GR +
Sbjct  492  QFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTY  551

Query  486  NAASMPPWELPGNATQSGMLSRSMKGHYGTANAIRFEDKEGAEELWLQAERDMRTEVEHD  545
            N  +MPPW LPG A+QSG++S+S+ G    +N +RF+DK GAEE+ ++AE+D+ T V ++
Sbjct  552  NQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNN  611

Query  546  ESHTVRHDRTRTVGHDESTTIDHDRTEKVGRGEQVDIGEDRRHSIGNDAHLSVGRDHKLR  605
            E+HTV  DRT+T+  +E+ +I++DR   V + + + +   +  +IG   +L VG +  LR
Sbjct  612  ETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLR  671

Query  606  IGKDRIEDIGNNRKDTIGADFRINTGGHVAHTVKG  640
             G+  +    +   +  G ++ ++T++ +    KG
Sbjct  672  CGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKG  706

38) Bxe_A4429 in NC_007951


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  442 bits (1666),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 265/585 (46%), Positives = 392/585 (68%), Gaps = 30/585 (5%)

Query  12   RGAALPGTPLGEPALLLRSIQGEEVLSQIYTYTLNCCTP----LASVMPEHAAANIDLKS  67
            +  +++G+++   ALL+ S++G E LS++++Y ++  TP    L+ V P   AAN+ LK+
Sbjct  98   HNVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSP---AANLPLKP  154

Query  68   MIGKELTVTIELEGMGDYVPglagiagaanigagTREISGIVTKAHYVGQSNQQSHYQLI  127
            M+GK+L V IEL+G G                   R+ISG+VT A+ VG+  +   Y+L 
Sbjct  155  MVGKDLCVNIELDGGG------------------KRHISGLVTAARVVGHEGRSVTYELR  196

Query  128  LAPWIWLADQRSDFRIFQGKTVVEIIEQVFENYMYSYQMRLSEQYPVLDYQVQYGETDFY  187
            + PW+ L  + SD++ FQ KTVV+I+++V+ +Y Y+ + RL E YPV   QVQYGETDF 
Sbjct  197  MEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFD  256

Query  188  FVQRLMAEHGIYWFFEHSDGFHRMILVDQPGAHKPVESAAYQTLWYFPPGHKIDREYVDR  247
            F+QRLM E GIYW FEHS++ H ++L D  +AHK+   ++    W    G K+D+E+++ 
Sbjct  257  FLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVE-WH-QEGLKLDKEFIHT  314

Query  248  FTLGGSLQSGRWTTNDFDFKKPNAVLIEQNELPQKTAHSNLERYEWPGDYTNPSHGEQFA  307
            +T   SL++G+W  +DFDF KP ++L +    P+ T+H+  E+YEWPGDY + S+GE ++
Sbjct  315  ITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLT  374

Query  308  RLRMEEVRAHGERARGSGNVRDIVCGTTFRLEGYPHEAANQEYLVISSSIAASEADQTTG  367
            R+RME  R+ G R  G+GN+R ++ G TF LE YP    NQEYL++ + +   +  Q +G
Sbjct  375  RIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSG  434

Query  368  SSE-YTFKSSFLVQPATTVFRPSRKPYPKPRTSGPQTAIVTGPPDQEIWTDQYGRVKLSF  426
              + +TF + F ++P+  VFRP R   +KP+T GPQ+AIVTGP++QEIWTDQYGRVK+ F
Sbjct  435  QDQHFTFSTRFELHPTREVFRPQRTV-SKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQF  493

Query  427  HWDRSGVKDQSSSCWIRVSYPWVGTNYGSINIPRIGTEVIVDFENGDPDLPIVTGRVYNA  486
             WDR G  D++SSCWIRVSYPW G  +G I+IPRIG EV+VDF NGDPDLPI+ GR YN 
Sbjct  494  GWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQ  553

Query  487  ASMPPWPLPAGATQSGTLSRSTKGGGYDNANAIRFEDMKGSEELWLHAEKDQRIEVEHDE  546
             +MPPW LP+ A+QSG +S+S  GG   N+N +RF+D  G+EE+ +HAEKD    V ++E
Sbjct  554  DTMPPWGLPGMASQSGIFSHSLYGGP-TNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNE  612

Query  547  SHWVGNNRLKTIDGNETVKVNMNRTEAVALNETIAVGMNRSEIVG  591
            +H V  +R KTI  NET  +  +R  +V+ N+ ++V + ++  +G
Sbjct  613  THTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIG  657


 Score = 34.3 bits (110),  Expect = 0.029, Method: Compositional matrix adjust.
 Identities = 20/82 (25%), Positives = 50/82 (61%), Gaps = 0/82 (0%)

Query  643  TSQIGNSLSQSAGQSISMTAGKMVSVNSGGTAGYSASDKLTLQCGQASISLESNGNITIS  702
            T+ IG+  + +  ++ +++     ++N G T     +D++TL+CG+A++ L+ +G+I + 
Sbjct  629  TNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFC  688

Query  703  GTSIDVQGSQHVGINGAIVDIN  724
            G  + ++ S+ + + G  +D+N
Sbjct  689  GKQLMLHTSDVMQLIGKGIDMN  710

39) BTI_4619 in NC_021174


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  439 bits (1654),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 259/548 (48%), Positives = 374/548 (69%), Gaps = 29/548 (5%)

Query  5    PAARTVSVSGPAVPMSPAGEPALELSAIRGNETLSEIYSYTLDCLTPPDPMLTG--ERAA  62
            P+A+ V+VSG+AVP +     AL ++++ G ETLSE++SY ++ L  PD +  G    AA
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQ-LKTPDTLNLGYVSPAA  148

Query  63   NLDLKAMIGKALTVTVRLEGMGSFVPGMPGMAGAANIGQGRREISGIVTGARFEGQLNRQ  122
            NL LK+M+GK L V + L+G                   G+R+ISG+VT+AR  G+  R 
Sbjct  149  NLPLKPMVGKDLCVNIELDG------------------GGKRHISGLVTAARVVGHEGRS  190

Query  123  CRYRLTMRPWIYLADQRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQY  182
              Y L M PW+ L  + SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQY
Sbjct  191  VTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQY  250

Query  183  GETDFAFIQRLMQEHGIYWFFEHSNKVHRMVLVDHLGAHKPVESVAYRTLRYYPPGHKID  242
            GETDF F+QRLMQE GIYW FEHS+  H +VL D ++AHK+    +   +     G K+D
Sbjct  251  GETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLD  308

Query  243  AEYIDTFGTEERIQPGRWTTDDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTDRE  302
             E+I+T+ ++E ++ G+W  DDFDF KP + L+   A PR+T+H   E+YEWPGDY D+ 
Sbjct  309  KEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKS  368

Query  303  HGEHFARVRMEEVRARGERASGGGNVRDIVCGTTFSLEGCPHASANREYLVLgatftate  362
            +GE ++R+RME  R+ G R  GGGN+R ++ G TF+LE  P A  N+EYL++ + +   +
Sbjct  369  EGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQD  428

Query  363  tggasgPGE-YRINTSFVAQPATTAFRPARTVRKPRTRGPQTAIVTGPRGQDIWTDQYGR  421
             +  SG ++ + ++T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGR
Sbjct  429  NAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGR  488

Query  422  VKLKFHWDRSPVDDQNSSCWVRVSYAWSGNNYGGVNVPRVGSEVIVDFEHGDPDRPLVTG  481
            VK++F WDR    D+NSSCW+RVSY+W+G+ +G +++PR+G EV+VDF +GDPD P++ G
Sbjct  489  VKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVG  548

Query  482  QVYNALHMPPWRLPENATQSGFMTRSPAGSGENANMLRFEDKAGAEQVKLHAERNYDVSV  541
            + YN   MPPW LP  A+QSG+ ++S  G+  N+NMLRF+DK+GAE+VK+HAE++ + +V
Sbjct  549  RTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTV  608

Query  542  ERDATTTV  549
              + T TV
Sbjct  609  KNNETHTV  616

40) cts1G in NC_013716


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  435 bits (1638),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 267/656 (41%), Positives = 429/656 (66%), Gaps = 41/656 (6%)

Query  2    SRTITLSSPAMPLLLGDTALVISKLDGEEALSSLYSYVITAKTPANPLIPW-QAASNVDL  60
            ++ +T+S++A+P      AL+++ LDG E+LS L+SYV+  KTP    +    +A+N+ L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  61   KALIGKEMTVTIELDGNGLGDIFAIGKDTREISGIVQRARYIGRDSNQALYEIVIRPWLH  120
            K+++GK++ V IELDG G           R+ISG+V  AR +G+++    YE+ + PW+ 
Sbjct  153  KPMVGKDLCVNIELDGGG----------KRHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  121  LAELTTDFKIFQKKTVVDIIDEVLGDYNFPLEKRLAGSYPLLDFQVQYGESDFNFIERLM  180
            L   T+D+K FQ+KTVVDI+DEVL++Y +P+EKRL  SYP+   QVQYGE+DF+F++RLM
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLM  262

Query  181  EEWGIYWFFEHAEQYHKLILVDNVGAHKRFPSEAYHVVQYAADRPKMDQEYISQFHFQET  240
            +EWGIYW FEH+E+ H L+L D ++AHK  P  +  +V+   +  K+D+E+I  +  +E+
Sbjct  263  QEWGIYWWFEHSEDSHTLVLADAISAHKACPDSP--LVEWHQEGLKLDKEFIHTITANES  320

Query  241  ITSGKWVTNDYDFTKSRADIMALDSKPRKTSFNEMEIFHWPGDYEQPNIGEQLARVRMEE  300
            + +G+WV +D+DFTK+R+ +    ++PR T+    E ++WPGDY + + GE L+R+RME 
Sbjct  321  LRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEA  380

Query  301  RGALGSRCEGSGELRGIACGCDFELVNYPVEKANREYMILRSHLVVEEINQVTDVDE-FR  359
            + + GSR  G+G++R +  G  F L NYP    N+EY+++++ L V++  Q ++ D+ F 
Sbjct  381  QRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFT  440

Query  360  YHCDFTVQPTTKIYRHPMTVPRPKTSGPQTAIVVGPDGEEIWTDEYGRVKVRFLWDRYGK  419
            +   F ++PT  ++R   TV++P T GPQ+AIV GP G+EIWTD+YGRVKV+F WDRYGK
Sbjct  441  FSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGK  500

Query  420  NRESDSCWLRVSQAWAGNNFGGIYIPRIGHEVIVDFINGDPDRPLIIGSLYNNVTMPPWD  479
              E+ SCW+RVS +WAG+ FG I IPRIG+EV+VDF NGDPD P+I+G  YN+ TMPPW+
Sbjct  501  MDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWG  560

Query  480  LPVNATQSGLVSRTVGGGRSNFNGIRFEDKPGLEQYWEQAERNMTRLTKQNEEQTIGMNS  539
            LP  A+QSG+ S+++ GG +N N +RF+DK G E+   +AE+++    K+NE +T+ ++ 
Sbjct  561  LPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDR  620

Query  540  NVNVGLSRNLFVGANYMSDVVGNSSAIIGGALAIQVGGGQTDNVALAKGINVGGAFMTTV  599
                               ++ N +  IG      V   +  +V LA+ IN+G ++   V
Sbjct  621  T----------------KTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDV  664

Query  600  GGYHSLavggasttvaggaMTLTAGGELVLSAKKIKIVGSEQVIIQGGTVELNPGD  655
            G+  +L         + +A+ L  +G + + +K++ +  S+ + + G  +++NP++
Sbjct  665  GDQFTL-------RCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDG  713

41) VAPA_1c02650 in NC_022247


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  432 bits (1625),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 272/577 (48%), Positives = 388/577 (68%), Gaps = 17/577 (2%)

Query  9    ARVLSVSSSAMPMLGGEPALEPIAIEGDEGLSRLFHYTLTLATPE--QPGYNERQAANVA  66
            A+ ++VS+SA+P      AL   +++G+E LS LF Y + L TP+  + GY    AAN++
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVS-PAANLP  151

Query  67   IKQLVGEALTAHIVLDGRPGSGPQRRHLSGLVTRVRFLRLENRRALYEAVIEPWLTLGTR  126
            +K +VG  L  +I LDG       +RH+SGLVT  R +  E R   YE  +EPW+ L T+
Sbjct  152  LKPMVGKDLCVNIELDG-----GGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTH  206

Query  127  TSDYRIFQNQNVLDIVREVLGKYGLPFDVRAVRSYPPREFQVQYGESDYDFVARLLHEWG  186
            TSDY+ FQN+ V+DI+ EVL+ Y  P + R V SYP R  QVQYGE+D+DF+ RL++EWG
Sbjct  207  TSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWG  266

Query  187  LYFYFEHEESSHKLVIVDDMASHQPFAHAGYQRIPFHAAEATVREEHCDRFNACEALQSG  246
            +Y  FEH E SH LV+ D +++H++ +++    +  H     +  E  + + A E+L++G
Sbjct  267  IYWWFEHSEDSHTLVLADAISAHKACPDS--PLVEWHQEGLKLDKEFIHTITANESLRTG  324

Query  247  RWVIGDFDFKRPKAELQQVSAMPRKTAQNTWERYGWPGDYVVESEGEQLVRTRMEETGSQ  306
            +WV++DFDF +P++ L +  A PR T++ T E+Y WPGDY   SEGE L R RME   S 
Sbjct  325  QWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSP  384

Query  307  GERAGGSGNLRAVVPGCLVTLERHPQNESNREYLVTDARLRLQDVGDASAQ-QEFECRVD  365
            G R  G+GN+R+++ G   TLE  P  E N+EYL+ ++ L +QD ++ S+Q Q+F     
Sbjct  385  GSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTR  444

Query  366  FEVIPTSKVFRASAPPVPRPRTTGPQTAIVTGPAGREIWTDEYGRVKLSFHWNRYCTKDE  425
            FE+ PT  VFR+    V++P+T GPQ+AIVTGPAG+EIWTD+YGRVK+ F W+RY   DE
Sbjct  445  FELHPTREVFRPQ-RTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDE  503

Query  426  NSSCWVRVSSPWAGTNFGGIQIPRIGQEVIVDFENGDPDRPIVTGRVYNADNMPPWTLPD  485
            NSSCW+RVS PWAG  FG IQIPRIGQEV+VDF NGDPD PI+ GR YN D MPPW LP+
Sbjct  504  NSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPG  563

Query  486  NATQSGLLTRSSEGATDANANALRFEDKKGQEQLWLHAERNQDIEVERDETHWVGNDRTK  545
             A+QSG++++S  G+  +N+N LRF+DK G E++ +HAE++ +  V  +ETH V  DRTK
Sbjct  564  MASQSGIFSHSLYGGP-TNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTK  622

Query  546  TIDRDETVHVKHDRTETVDHDETITVHNNRTETVDGN  582
            TI ++ET  + +DR  TV  ++ ++V   +T  ++  
Sbjct  623  TIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTT  659


 Score = 36.4 bits (118),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 20/67 (30%), Positives = 41/67 (62%), Gaps = 0/67 (0%)

Query  674  SVGAAMNTSVALMQTEQVGRSKRVDVRNTFDITAGDEFSITVGKSTLVMKSDGTITFNGH  733
            S+G   NT+V+  +   V  ++ +++  T+ +  GD+F++  G+++LV+  DG+I F G 
Sbjct  631  SIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGK  690

Query  734  TFNVGTS  740
             + + TS
Sbjct  691  QLMLHTS  697


 Score = 33.2 bits (106),  Expect = 0.063, Method: Compositional matrix adjust.
 Identities = 26/75 (35%), Positives = 43/75 (58%), Gaps = 0/75 (0%)

Query  604  HKNRTETVDLNETIGIGMNRTETVGMNETIDIGDNRVVTIGGNKAETVALAKAETIGLAK  663
            +K+   TV  NET  + ++RT T+  NET  IG++R  T+  N + +V LA++  IG + 
Sbjct  601  EKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTY  660

Query  664  ALTIGLGYQVSVGAA  678
             L +G  + +  G A
Sbjct  661  RLDVGDQFTLRCGNA  675


 Score = 32.4 bits (103),  Expect = 0.11, Method: Compositional matrix adjust.
 Identities = 28/105 (27%), Positives = 55/105 (53%), Gaps = 6/105 (5%)

Query  566  DETITVHNNR--TETVDGNETITIHKNRTETVDLDETITVHKNRTETVDLNETIGIGMNR  623
             E +  H ++    TV  NET T+  +RT T+  +ET ++  +R  TV  N+ +++ + +
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  624  TETVGMNETIDIGDNRVVTIGGNKAETVALAKAETIGL-AKALTI  667
            T  +G    +D+GD+  +  G     ++ L K  +I + +K L +
Sbjct  653  TINIGTTYRLDVGDQFTLRCG---NAALVLHKDGSIEFCGKQLML  694

42) VAPA_2c03170 in NC_022234


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  430 bits (1618),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 271/577 (47%), Positives = 387/577 (68%), Gaps = 17/577 (2%)

Query  9    ARVLSVSSSAMPMLGGEPALEPIAIEGDEGLSRLFHYTLTLATPE--QPGYNERQAANVA  66
            A+ ++VS+SA+P      AL   +++G+E LS LF Y + L TP+  + GY    AAN++
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVS-PAANLP  151

Query  67   IKQLVGEALTAHIVLDGRPGSGPQRRHLSGLVTRVRFLRLENRRALYEAVIEPWLTLGTR  126
            +K +VG  L  +I LDG       +RH+SGLVT  R +  E R   YE  +EPW+ L T+
Sbjct  152  LKPMVGKDLCVNIELDG-----GGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTH  206

Query  127  TSDYRIFQNQNVLDIVREVLGKYGLPFDVRAVRSYPPREFQVQYGESDYDFVARLLHEWG  186
            TSDY+ FQN+ V+DI+ EVL+ Y  P + R V SYP R  QVQYGE+D+DF+ RL++EWG
Sbjct  207  TSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWG  266

Query  187  LYFYFEHEESSHKLVIVDDMASHQPFAHAGYQRIPFHAAEATVREEHCDRFNACEALQSG  246
            +Y  FEH E SH LV+ D +++H++ +++    +  H     +  E  + + A E+L++G
Sbjct  267  IYWWFEHSEDSHTLVLADAISAHKACPDS--PLVEWHQEGLKLDKEFIHTITANESLRTG  324

Query  247  RWVIGDFDFKRPKAELQQVSAMPRKTAQNTWERYGWPGDYVVESEGEQLVRTRMEETGSQ  306
            +WV++DFDF +P++ L +  A PR T++ T E+Y WPGDY   SEGE L R RME   S 
Sbjct  325  QWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSP  384

Query  307  GERAGGSGNLRAVVPGCLVTLERHPQNESNREYLVTDARLRLQDVGDASAQ-QEFECRVD  365
            G R  G+GN+R+++ G   TLE  P  E N+EYL+ ++ L +QD ++ S+Q Q+F     
Sbjct  385  GSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTR  444

Query  366  FEVIPTSKVFRASAPPVPRPRTTGPQTAIVTGPAGREIWTDEYGRVKLSFHWNRYCTKDE  425
            FE+ PT  VFR+    V++P+T GPQ+AIVTGPAG+EIWTD+YGRVK+ F W+RY   DE
Sbjct  445  FELHPTREVFRPQ-RTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDE  503

Query  426  NSSCWVRVSSPWAGTNFGGIQIPRIGQEVIVDFENGDPDRPIVTGRVYNADNMPPWTLPD  485
            NSSCW+RVS PWAG  FG IQIPRIGQEV+VDF NGDPD PI+ GR YN D MPPW LP+
Sbjct  504  NSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPG  563

Query  486  NATQSGLLTRSSEGATDANANALRFEDKKGQEQLWLHAERNQDIEVERDETHWVGNDRSK  545
             A+QSG++++S  G+  +N+N LRF+DK G E++ +HAE++ +  V  +ETH V  DR+K
Sbjct  564  MASQSGIFSHSLYGGP-TNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTK  622

Query  546  TIDHDETVHVKHDRTETVDHDETITVHNDRTETVDGN  582
            TI  +ET  + +DR  TV  ++ ++V   +T  ++  
Sbjct  623  TIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTT  659


 Score = 44.5 bits (149),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 26/80 (33%), Positives = 52/80 (65%), Gaps = 0/80 (0%)

Query  658  SVGAAMNTSVALMQTEQVGQSKRVDVGQTLTLQAGDRIQLVCGKSSLVMTSDGMVTINGS  717
            S+G   NT+V+  +   V  ++ +++G T  L+ GD++ L CG+++LV+  DG + + G 
Sbjct  631  SIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGK  690

Query  718  SFDFSASGPVQVSGKDIDLN  737
             + + +S+ +Q+ GK+ID+N
Sbjct  691  QLMLHTSDVMQLIGKGIDMN  710


 Score = 40.3 bits (133),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 42/163 (26%), Positives = 81/163 (50%), Gaps = 27/163 (16%)

Query  575  RTETVDGNETITIH--KNRTETVDLDETITVHKNRTETVDLNETIDIGDNRVVTIGGNKA  632
            R +   G E + +H  K+   TV  +ET TV  +RT T+  NET  IG++R  T+   K 
Sbjct  586  RFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTV--TKN  643

Query  633  ETVALAKAETIGLAKALTIGLGYQVSVGAAMNTSVALMQTEQVGQSKRVDVGQTLTLQAG  692
            + +      ++ LA+++ IG  Y++ VG       +                 +L L+ +
Sbjct  644  DGL------SVKLAQTINIGTTYRLDVGDQFTLRCG---------------NAALVLHKD  682

Query  693  DRIQLVCGKSSLVMTSDGMVTINGSSFDFSASGPVQVSGKDID  735
            + I++ CGK  L++ + +++ + G ++D ++ G   V++ DI 
Sbjct  683  GSIEF-CGK-QLMLHTSDVMQLIGKGIDMNPDGGTAVTADDIA  723

43) BTH_II0129 in NC_007650


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  429 bits (1615),  Expect = 5e-121, Method: Compositional matrix adjust.
 Identities = 284/676 (43%), Positives = 435/676 (65%), Gaps = 59/676 (8%)

Query  13   SRTVVIRSGAMPRLLGQPALKFLSLRGEEHLGKLYTYELLLRTPDDFHVP-LATSANLDL  71
            ++ V + ++A+P      AL F SL G E L+ L++Y + L+TPD +++  ++ +ANL L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  72   KAMIGTEMTVGIQLDgigtgaqggvgagaREISGLVVKAGFLRSEGRYNVYRIELRPWLW  131
            K+M+G ++ V I+LDG G           R+ISGLV  A  +  EGR   Y + + PW+ 
Sbjct  153  KPMVGKDLCVNIELDGGGK----------RHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  132  LATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGE  191
            L T TSDYK FQ+K+VV+I+D VL +YPYPVEKRL ++ Y+V         R+ QVQYGE
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGE  252

Query  192  TDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAHHPEGGKIDIE  251
            TDFDF+QRLM+EWGIYW FEHS++ H LVL D I++H+  P  +   +  H EG K+D E
Sbjct  253  TDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKE  310

Query  252  YINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHG  311
            +I+ ++++E+LR G+ V+DDFDFT+P + L  +  +PRET  +  E +EWPGDY D  +G
Sbjct  311  FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEG  370

Query  312  DLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLAKHKHDDANREYLVIESALMLTEVA  371
            ++++R+RME +R+ GSR  G GN+R L  G TF L +    + N+EYL++++ L + + A
Sbjct  371  EMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA  430

Query  372  DETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTNGPQSAIVVGPPGHEVWTDEFGRVK  431
            +++G + ++     + ++P+ EVFR  R  +KP T+GPQSAIV GP+G+E+WTD++GRVK
Sbjct  431  QHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVK  490

Query  432  IRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSL  491
            ++F WDRY++ D   SCW+RVS +WAG  FG I IPRIGQEV+V+F NGDPD P+I+G  
Sbjct  491  VQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRT  550

Query  492  YNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKN  551
            YN  T PPW+LPG A++SG+ S S+ GG  N N +RF+DK GAEE   +AEKD+N   KN
Sbjct  551  YNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKN  610

Query  552  DESHTIGANYSIGVGITHTRAVGAMFssivggaasyavggaesTMIGGAYALNvggahav  611
            +E+HT+  + +  +   +T ++G   ++ V    + +V  A++  IG +Y L        
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL--------  662

Query  612  avggassvsvggaYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKIVGKNIRIIGSD  671
                            +VG+ ++L         CG +++ +   GSI + GK++ +  SD
Sbjct  663  ----------------DVGDQFTLR--------CGNAALVLHKDGSIEFCGKQLMLHTSD  698

Query  672  EVVVQGAPLQLNPGDS  687
             + + G  +++NP+++
Sbjct  699  VMQLIGKGIDMNPDGG  714

44) vgrG-2 in NC_017832


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  425 bits (1599),  Expect = 8e-120, Method: Compositional matrix adjust.
 Identities = 285/676 (43%), Positives = 433/676 (65%), Gaps = 59/676 (8%)

Query  13   SRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVP-LATSANLDL  71
            ++ V + ++A+P      AL F SL G E L+ L++Y + L+TPD +++  ++ +ANL L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  72   KAMIGTEMTVCIQLDgigtgaqggvgagaREISGLVVKAGFLRCEGRYNVYRIELRPWLW  131
            K+M+G ++ V I+LDG G           R+ISGLV  A  +  EGR   Y + + PW+ 
Sbjct  153  KPMVGKDLCVNIELDGGGK----------RHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  132  LATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGE  191
            L T TSDYK FQ+K+VV+I+D VL +YPYPVEKRL ++ Y+V         R+ QVQYGE
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGE  252

Query  192  TDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAHHPEGGKIDIE  251
            TDFDF+QRLM+EWGIYW FEHS++ H LVL D I++H+  P  +   +  H EG K+D E
Sbjct  253  TDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKE  310

Query  252  YINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHG  311
            +I+ ++++E+LR G+ V+DDFDFT+P + L  +  +PRET  +  E +EWPGDY D  +G
Sbjct  311  FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEG  370

Query  312  DLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVA  371
            ++++R+RME +R+ GSR  G GN+R L  G TF L +      N+EYL++++ L + + A
Sbjct  371  EMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA  430

Query  372  DETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGHEVWTDEFGRVK  431
            +++G + ++     + ++P+ EVFR  R  +KP T GPQSAIV GP+G+E+WTD++GRVK
Sbjct  431  QHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVK  490

Query  432  IRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSL  491
            ++F WDRY++ D   SCW+RVS +WAG  FG I IPRIGQEV+V+F NGDPD P+I+G  
Sbjct  491  VQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRT  550

Query  492  YNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKN  551
            YN  T PPW+LPG A++SG+ S S+ GG  N N +RF+DK GAEE   +AEKD+N   KN
Sbjct  551  YNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKN  610

Query  552  DESHTVGANFSIGVGLTHTRAVGAMFssivggaasyavggaesTMIGGAYALNvggahav  611
            +E+HTV  + +  +   +T ++G   ++ V    + +V  A++  IG +Y L        
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL--------  662

Query  612  avggassvsvggaYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKIVGKNIRIIGSD  671
                            +VG+ ++L         CG +++ +   GSI + GK++ +  SD
Sbjct  663  ----------------DVGDQFTLR--------CGNAALVLHKDGSIEFCGKQLMLHTSD  698

Query  672  EVVVQGAPLQLNPGDS  687
             + + G  +++NP+++
Sbjct  699  VMQLIGKGIDMNPDGG  714

45) BURPS1106A_A0143 in NC_009078


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  425 bits (1599),  Expect = 8e-120, Method: Compositional matrix adjust.
 Identities = 285/676 (43%), Positives = 433/676 (65%), Gaps = 59/676 (8%)

Query  13   SRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVP-LATSANLDL  71
            ++ V + ++A+P      AL F SL G E L+ L++Y + L+TPD +++  ++ +ANL L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  72   KAMIGTEMTVCIQLDgigtgaqggvgagaREISGLVVKAGFLRCEGRYNVYRIELRPWLW  131
            K+M+G ++ V I+LDG G           R+ISGLV  A  +  EGR   Y + + PW+ 
Sbjct  153  KPMVGKDLCVNIELDGGGK----------RHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  132  LATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGE  191
            L T TSDYK FQ+K+VV+I+D VL +YPYPVEKRL ++ Y+V         R+ QVQYGE
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGE  252

Query  192  TDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAHHPEGGKIDIE  251
            TDFDF+QRLM+EWGIYW FEHS++ H LVL D I++H+  P  +   +  H EG K+D E
Sbjct  253  TDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKE  310

Query  252  YINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHG  311
            +I+ ++++E+LR G+ V+DDFDFT+P + L  +  +PRET  +  E +EWPGDY D  +G
Sbjct  311  FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEG  370

Query  312  DLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVA  371
            ++++R+RME +R+ GSR  G GN+R L  G TF L +      N+EYL++++ L + + A
Sbjct  371  EMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA  430

Query  372  DETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGHEVWTDEFGRVK  431
            +++G + ++     + ++P+ EVFR  R  +KP T GPQSAIV GP+G+E+WTD++GRVK
Sbjct  431  QHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVK  490

Query  432  IRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSL  491
            ++F WDRY++ D   SCW+RVS +WAG  FG I IPRIGQEV+V+F NGDPD P+I+G  
Sbjct  491  VQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRT  550

Query  492  YNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKN  551
            YN  T PPW+LPG A++SG+ S S+ GG  N N +RF+DK GAEE   +AEKD+N   KN
Sbjct  551  YNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKN  610

Query  552  DESHTVGANFSIGVGLTHTRAVGAMFssivggaasyavggaesTMIGGAYALNvggahav  611
            +E+HTV  + +  +   +T ++G   ++ V    + +V  A++  IG +Y L        
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL--------  662

Query  612  avggassvsvggaYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKIVGKNIRIIGSD  671
                            +VG+ ++L         CG +++ +   GSI + GK++ +  SD
Sbjct  663  ----------------DVGDQFTLR--------CGNAALVLHKDGSIEFCGKQLMLHTSD  698

Query  672  EVVVQGAPLQLNPGDS  687
             + + G  +++NP+++
Sbjct  699  VMQLIGKGIDMNPDGG  714

46) BURPS1710b_A1613 in NC_007435


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  425 bits (1599),  Expect = 8e-120, Method: Compositional matrix adjust.
 Identities = 285/676 (43%), Positives = 433/676 (65%), Gaps = 59/676 (8%)

Query  13   SRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVP-LATSANLDL  71
            ++ V + ++A+P      AL F SL G E L+ L++Y + L+TPD +++  ++ +ANL L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  72   KAMIGTEMTVCIQLDgigtgaqggvgagaREISGLVVKAGFLRCEGRYNVYRIELRPWLW  131
            K+M+G ++ V I+LDG G           R+ISGLV  A  +  EGR   Y + + PW+ 
Sbjct  153  KPMVGKDLCVNIELDGGGK----------RHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  132  LATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGE  191
            L T TSDYK FQ+K+VV+I+D VL +YPYPVEKRL ++ Y+V         R+ QVQYGE
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGE  252

Query  192  TDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAHHPEGGKIDIE  251
            TDFDF+QRLM+EWGIYW FEHS++ H LVL D I++H+  P  +   +  H EG K+D E
Sbjct  253  TDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKE  310

Query  252  YINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHG  311
            +I+ ++++E+LR G+ V+DDFDFT+P + L  +  +PRET  +  E +EWPGDY D  +G
Sbjct  311  FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEG  370

Query  312  DLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVA  371
            ++++R+RME +R+ GSR  G GN+R L  G TF L +      N+EYL++++ L + + A
Sbjct  371  EMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA  430

Query  372  DETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGHEVWTDEFGRVK  431
            +++G + ++     + ++P+ EVFR  R  +KP T GPQSAIV GP+G+E+WTD++GRVK
Sbjct  431  QHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVK  490

Query  432  IRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSL  491
            ++F WDRY++ D   SCW+RVS +WAG  FG I IPRIGQEV+V+F NGDPD P+I+G  
Sbjct  491  VQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRT  550

Query  492  YNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKN  551
            YN  T PPW+LPG A++SG+ S S+ GG  N N +RF+DK GAEE   +AEKD+N   KN
Sbjct  551  YNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKN  610

Query  552  DESHTVGANFSIGVGLTHTRAVGAMFssivggaasyavggaesTMIGGAYALNvggahav  611
            +E+HTV  + +  +   +T ++G   ++ V    + +V  A++  IG +Y L        
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL--------  662

Query  612  avggassvsvggaYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKIVGKNIRIIGSD  671
                            +VG+ ++L         CG +++ +   GSI + GK++ +  SD
Sbjct  663  ----------------DVGDQFTLR--------CGNAALVLHKDGSIEFCGKQLMLHTSD  698

Query  672  EVVVQGAPLQLNPGDS  687
             + + G  +++NP+++
Sbjct  699  VMQLIGKGIDMNPDGG  714

47) BURPS668_A0166 in NC_009075


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  425 bits (1599),  Expect = 9e-120, Method: Compositional matrix adjust.
 Identities = 285/676 (43%), Positives = 433/676 (65%), Gaps = 59/676 (8%)

Query  13   SRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVP-LATSANLDL  71
            ++ V + ++A+P      AL F SL G E L+ L++Y + L+TPD +++  ++ +ANL L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  72   KAMIGTEMTVCIQLDgigtgaqggvgagaREISGLVVKAGFLRCEGRYNVYRIELRPWLW  131
            K+M+G ++ V I+LDG G           R+ISGLV  A  +  EGR   Y + + PW+ 
Sbjct  153  KPMVGKDLCVNIELDGGGK----------RHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  132  LATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGE  191
            L T TSDYK FQ+K+VV+I+D VL +YPYPVEKRL ++ Y+V         R+ QVQYGE
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGE  252

Query  192  TDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAHHPEGGKIDIE  251
            TDFDF+QRLM+EWGIYW FEHS++ H LVL D I++H+  P  +   +  H EG K+D E
Sbjct  253  TDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKE  310

Query  252  YINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHG  311
            +I+ ++++E+LR G+ V+DDFDFT+P + L  +  +PRET  +  E +EWPGDY D  +G
Sbjct  311  FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEG  370

Query  312  DLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVA  371
            ++++R+RME +R+ GSR  G GN+R L  G TF L +      N+EYL++++ L + + A
Sbjct  371  EMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA  430

Query  372  DETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGHEVWTDEFGRVK  431
            +++G + ++     + ++P+ EVFR  R  +KP T GPQSAIV GP+G+E+WTD++GRVK
Sbjct  431  QHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVK  490

Query  432  IRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSL  491
            ++F WDRY++ D   SCW+RVS +WAG  FG I IPRIGQEV+V+F NGDPD P+I+G  
Sbjct  491  VQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRT  550

Query  492  YNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKN  551
            YN  T PPW+LPG A++SG+ S S+ GG  N N +RF+DK GAEE   +AEKD+N   KN
Sbjct  551  YNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKN  610

Query  552  DESHTVGANFSIGVGLTHTRAVGAMFssivggaasyavggaesTMIGGAYALNvggahav  611
            +E+HTV  + +  +   +T ++G   ++ V    + +V  A++  IG +Y L        
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL--------  662

Query  612  avggassvsvggaYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKIVGKNIRIIGSD  671
                            +VG+ ++L         CG +++ +   GSI + GK++ +  SD
Sbjct  663  ----------------DVGDQFTLR--------CGNAALVLHKDGSIEFCGKQLMLHTSD  698

Query  672  EVVVQGAPLQLNPGDS  687
             + + G  +++NP+++
Sbjct  699  VMQLIGKGIDMNPDGG  714

48) BPSS0105 in NC_006351


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  424 bits (1596),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 285/676 (43%), Positives = 433/676 (65%), Gaps = 59/676 (8%)

Query  24   SRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVP-LATSANLDL  82
            ++ V + ++A+P      AL F SL G E L+ L++Y + L+TPD +++  ++ +ANL L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  83   KAMIGTEMTVCIQLDgigtgaqggvgagaREISGLVVKAGFLRCEGRYNVYRIELRPWLW  142
            K+M+G ++ V I+LDG G           R+ISGLV  A  +  EGR   Y + + PW+ 
Sbjct  153  KPMVGKDLCVNIELDGGGK----------RHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  143  LATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGE  202
            L T TSDYK FQ+K+VV+I+D VL +YPYPVEKRL ++ Y+V         R+ QVQYGE
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGE  252

Query  203  TDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAHHPEGGKIDIE  262
            TDFDF+QRLM+EWGIYW FEHS++ H LVL D I++H+  P  +   +  H EG K+D E
Sbjct  253  TDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKE  310

Query  263  YINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHG  322
            +I+ ++++E+LR G+ V+DDFDFT+P + L  +  +PRET  +  E +EWPGDY D  +G
Sbjct  311  FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEG  370

Query  323  DLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVA  382
            ++++R+RME +R+ GSR  G GN+R L  G TF L +      N+EYL++++ L + + A
Sbjct  371  EMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA  430

Query  383  DETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGHEVWTDEFGRVK  442
            +++G + ++     + ++P+ EVFR  R  +KP T GPQSAIV GP+G+E+WTD++GRVK
Sbjct  431  QHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVK  490

Query  443  IRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSL  502
            ++F WDRY++ D   SCW+RVS +WAG  FG I IPRIGQEV+V+F NGDPD P+I+G  
Sbjct  491  VQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRT  550

Query  503  YNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKN  562
            YN  T PPW+LPG A++SG+ S S+ GG  N N +RF+DK GAEE   +AEKD+N   KN
Sbjct  551  YNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKN  610

Query  563  DESHTVGANFSIGVGLTHTRAVGAMFssivggaasyavggaesTMIGGAYALNvggahav  622
            +E+HTV  + +  +   +T ++G   ++ V    + +V  A++  IG +Y L        
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL--------  662

Query  623  avggassvsvggaYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKLVGKNIRIIGSD  682
                            +VG+ ++L         CG +++ +   GSI + GK++ +  SD
Sbjct  663  ----------------DVGDQFTLR--------CGNAALVLHKDGSIEFCGKQLMLHTSD  698

Query  683  EVVVQGAPLQLNPGDS  698
             + + G  +++NP+++
Sbjct  699  VMQLIGKGIDMNPDGG  714

49) BDL_5941 in NC_021877


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  424 bits (1596),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 285/676 (43%), Positives = 433/676 (65%), Gaps = 59/676 (8%)

Query  13   SRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVP-LATSANLDL  71
            ++ V + ++A+P      AL F SL G E L+ L++Y + L+TPD +++  ++ +ANL L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  72   KAMIGTEMTVCIQLDgigtgaqggvgagaREISGLVVKAGFLRCEGRYNVYRIELRPWLW  131
            K+M+G ++ V I+LDG G           R+ISGLV  A  +  EGR   Y + + PW+ 
Sbjct  153  KPMVGKDLCVNIELDGGGK----------RHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  132  LATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGE  191
            L T TSDYK FQ+K+VV+I+D VL +YPYPVEKRL ++ Y+V         R+ QVQYGE
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGE  252

Query  192  TDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAHHPEGGKIDIE  251
            TDFDF+QRLM+EWGIYW FEHS++ H LVL D I++H+  P  +   +  H EG K+D E
Sbjct  253  TDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKE  310

Query  252  YINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHG  311
            +I+ ++++E+LR G+ V+DDFDFT+P + L  +  +PRET  +  E +EWPGDY D  +G
Sbjct  311  FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEG  370

Query  312  DLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVA  371
            ++++R+RME +R+ GSR  G GN+R L  G TF L +      N+EYL++++ L + + A
Sbjct  371  EMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA  430

Query  372  DETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGHEVWTDEFGRVK  431
            +++G + ++     + ++P+ EVFR  R  +KP T GPQSAIV GP+G+E+WTD++GRVK
Sbjct  431  QHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVK  490

Query  432  IRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSL  491
            ++F WDRY++ D   SCW+RVS +WAG  FG I IPRIGQEV+V+F NGDPD P+I+G  
Sbjct  491  VQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRT  550

Query  492  YNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKN  551
            YN  T PPW+LPG A++SG+ S S+ GG  N N +RF+DK GAEE   +AEKD+N   KN
Sbjct  551  YNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKN  610

Query  552  DESHTVGANFSIGVGLTHTRAVGAMFssivggaasyavggaesTMIGGAYALNvggahav  611
            +E+HTV  + +  +   +T ++G   ++ V    + +V  A++  IG +Y L        
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL--------  662

Query  612  avggassvsvggaYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKIVGKNIRIIGSD  671
                            +VG+ ++L         CG +++ +   GSI + GK++ +  SD
Sbjct  663  ----------------DVGDQFTLR--------CGNAALVLHKDGSIEFCGKQLMLHTSD  698

Query  672  EVVVQGAPLQLNPGDS  687
             + + G  +++NP+++
Sbjct  699  VMQLIGKGIDMNPDGG  714

50) YE105_C1603 in NC_015224


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  423 bits (1592),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 248/559 (45%), Positives = 381/559 (69%), Gaps = 14/559 (2%)

Query  9    ALVLSKLEGEEAFSTLYSYTITAKTPANPSIPW-QTASNVDLKALIGKEMTIEMELDGNG  67
            AL+++ L+G E++S L+SY +  KTP   ++     A+N+ LK+++GK++ +++ELDG G
Sbjct  111  ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGG  170

Query  68   LDYVKGVGKGTREISGLVEKARFIGRDANQAMFEIVLRPWFYLTDLTSDFKIFQNKNVVD  127
                       R+ISGLV  AR +G+++    +E+ + PW  L   TSD+K FQNK VVD
Sbjct  171  ----------KRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVD  220

Query  128  IIDEVLADYNFPFEKRLATTYPILDFQVQYGETDFNFLQRLMEEWGIYWFFEHDDHKQKL  187
            I+DEVLA+Y +P EKRL  +YP+   QVQYGETDF+FLQRLM+EWGIYW FEH ++ + L
Sbjct  221  ILDEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTL  280

Query  188  ILVDHVGAHKRYFSEAYHTIEYLSDEPKAGEEYITQFQTQETLTTGRWVYNDYDFTKSRA  247
            +L D ++AHK     +   +E   +  K + E+I  + ++E+L TG+WV +D+DFTK+R+
Sbjct  281  VLADAISAHKACPDSPL--VEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRS  338

Query  248  DILTMDSKPRKTSFSDLEIYQWPGDYDQPDIGEHLARVRIEERGALGSRAVGCGEVRGIV  307
             +    ++PR T+ +  E Y+WPGDY +   GE L+R+R+E + + GSR +G G++R ++
Sbjct  339  LLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLM  398

Query  308  CGANFELQGFPVDKANREYMVISSRLSVSEVAQLS-RGDEFHYETTFTVQPTTKIYRHPQ  366
             G  F L+ +P    N+EY+++ + L V + AQ S ++++F + T F ++PT  ++R  +
Sbjct  399  TGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQR  458

Query  367  LTPKPKTSGPQNAIVVGPPGEEVWTDEYGRVKVRFVWDRYGKNAESDSCWLRVSQAWAGN  426
              +KP T GPQ+AIV GP+G+E+WTD+YGRVKV+F WDRYGK  E+ SCW+RVS +WAG+
Sbjct  459  TVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGK  518

Query  427  SFGGIYIPRIGQEVLVDCINGDPDRPLVSGSLYNNVTRPPWDLPANATQSGMVSRTIGGG  486
            +FG I IPRIGQEVLVD  NGDPD P++ G  YN+ T PPW+LP+ A+QSG+ S+++ GG
Sbjct  519  GFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGG  578

Query  487  LTNYNGVRFEDKPGLEQYWEQAERDMARLTKNDETQVIGANADLSVGANRSVLVGANSTS  546
             TN N +RF+DK G E+   +AE+D+    KN+ET+ +  +   ++  N +  +G +  +
Sbjct  579  PTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNT  638

Query  547  TVLGASAQSVALASSIQVG  565
            TV    + SV LA +I++G
Sbjct  639  TVTKNDGLSVKLAQTINIG  657

51) BPC006_II0139 in NC_018529


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  422 bits (1590),  Expect = 4e-119, Method: Compositional matrix adjust.
 Identities = 282/658 (43%), Positives = 424/658 (65%), Gaps = 55/658 (8%)

Query  15   ALEFLSLRGEEHLGKLYTYELLLRTPDDFHVP-LATSANLDLKAMIGTEMTVCIQLDgig  73
            AL F SL G E L+ L++Y + L+TPD +++  ++ +ANL LK+M+G ++ V I+LDG G
Sbjct  111  ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGG  170

Query  74   tgaqggvgagaREISGLVVKAGFLRCEGRYNVYRIELRPWLWLATLTSDYKIFQDKSVVE  133
                       R+ISGLV  A  +  EGR   Y + + PW+ L T TSDYK FQ+K+VV+
Sbjct  171  K----------RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVD  220

Query  134  IIDTVLHDYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGETDFDFVQRLMEEWGIYWF  193
            I+D VL +YPYPVEKRL ++ Y+V         R+ QVQYGETDFDF+QRLM+EWGIYW 
Sbjct  221  ILDEVLAEYPYPVEKRL-VESYPV---------RTWQVQYGETDFDFLQRLMQEWGIYWW  270

Query  194  FEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAHHPEGGKIDIEYINYFSTDEALRPGRVVI  253
            FEHS++ H LVL D I++H+  P  +   +  H EG K+D E+I+ ++++E+LR G+ V+
Sbjct  271  FEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKEFIHTITANESLRTGQWVL  328

Query  254  DDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHGDLISRVRMEERRATGSRA  313
            DDFDFT+P + L  +  +PRET  +  E +EWPGDY D  +G++++R+RME +R+ GSR 
Sbjct  329  DDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRV  388

Query  314  YGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVADETGSGYRYECDNELVVQ  373
             G GN+R L  G TF L +      N+EYL++++ L + + A+++G + ++     + ++
Sbjct  389  LGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELH  448

Query  374  PSNEVFRMPRETPKPTTSGPQSAIVVGPPGHEVWTDEFGRVKIRFLWDRYARNDATDSCW  433
            P+ EVFR  R  +KP T GPQSAIV GP+G+E+WTD++GRVK++F WDRY++ D   SCW
Sbjct  449  PTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCW  508

Query  434  VRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSLYNTITPPPWDLPGDATKS  493
            +RVS +WAG  FG I IPRIGQEV+V+F NGDPD P+I+G  YN  T PPW+LPG A++S
Sbjct  509  IRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQS  568

Query  494  GFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKNDESHTVGANFSIGVGLTH  553
            G+ S S+ GG  N N +RF+DK GAEE   +AEKD+N   KN+E+HTV  + +  +   +
Sbjct  569  GIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNE  628

Query  554  TRAVGAMFssivggaasyavggaesTMIGGAYALNvggahavavggassvsvggaYARNV  613
            T ++G   ++ V    + +V  A++  IG +Y L                        +V
Sbjct  629  TNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL------------------------DV  664

Query  614  GGAYALTVGGVLSIVCGASSITMTACGSIKIVGKNIRIIGSDEVVVQGAPLQLNPGDS  671
            G+ ++L         CG +++ +   GSI + GK++ +  SD + + G  +++NP+++
Sbjct  665  GDQFTLR--------CGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGG  714

52) YPDSF_2036 in NC_009381


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  420 bits (1581),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 244/590 (42%), Positives = 395/590 (67%), Gaps = 17/590 (2%)

Query  2    SRTINLSSPAMPYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPLIPW-QAASNVDL  60
            ++ + +S++A+P      AL+++ L+G E++S L+SY +  KTP    +    +A+N+ L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  61   KSLIGKEMTIEMELDGNGLGDVRSVGKGTREITGLVERARYIGRDANQAIFEITIKPWFY  120
            K+++GK++ +++ELDG G           R+I+GLV  AR +G+++    +E+ + PW  
Sbjct  153  KPMVGKDLCVNIELDGGG----------KRHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  121  LANLTSDFKIYQNKNVVDIIEEVFSDYNFPFEKRLATTYPILDFQVQYGETDFNFLQRLM  180
            L   TSD+K +QNK VVDI++EV+++Y +P EKRL  +YP+   QVQYGETDF+FLQRLM
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLM  262

Query  181  EEWGIYWFFEHQDHKQKLILVDHVGAHKRSFSTAYHAIEYLSDEPKAGEEYITQFQTQET  240
            +EWGIYW FEH ++ + L+L D ++AHK    ++   +E   +  K + E+I  + ++E+
Sbjct  263  QEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKEFIHTITANES  320

Query  241  LTSGTWVTNDYDFTKSRADILAMDSKPRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEE  300
            L +G WV +D+DFTK+R+ +    ++PR T+    E Y+WPGDY +   GE L+R+R+E 
Sbjct  321  LRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEA  380

Query  301  RGALGSRAVGSGQLRGIVCGANFELKGFPVDKANREYMIISSRLTVAEVDQLSGGEDAFS  360
            + + GSR +G+G++R ++ G  F L  +P    N+EY+++ + L V +  Q SG ++ F+
Sbjct  381  QRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFT  440

Query  361  CESSFTVQPTTKIYRHPQVTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKVRFVWDRYGT  420
              + F ++PT  ++R  +  +KP T+GPQ+AI+ GP+G+EIWTD+YGRVKV+F WDRYG 
Sbjct  441  FSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGK  500

Query  421  NSESDSCWLRVSQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWD  480
              E+ SCW+RVS +WAG++FG I IPRIGQEV+VD  NGDPD P+++G  YN+ T PPW+
Sbjct  501  MDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWG  560

Query  481  LPANATQSGMVSRTVGGGLTNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADS  540
            LP+ A+QSG+ S+++ GG TN N +RF+DK+G E+   +AE+D++   KNNET+ +  D 
Sbjct  561  LPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDR  620

Query  541  VLNVGANRSEVVGANYNQDVLGTSMLAIGAASMLQVGLARSVVVGGAHSL  590
               +  N ++ +G + N  V     L++  A  +++G +  + VG+  +L
Sbjct  621  TKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTL  670

53) vgrG2 in NC_005810


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  419 bits (1579),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 244/590 (42%), Positives = 395/590 (67%), Gaps = 17/590 (2%)

Query  2    SRTINLSSPAMPYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPLIPW-QAASNVDL  60
            ++ + +S++A+P      AL+++ L+G E++S L+SY +  KTP    +    +A+N+ L
Sbjct  97   AHNVTVSGSAVP----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPL  152

Query  61   KSLIGKEMTIEMELDGNGLGDVRSVGKGTREITGLVERARYIGRDANQAIFEITIKPWFY  120
            K+++GK++ +++ELDG G           R+I+GLV  AR +G+++    +E+ + PW  
Sbjct  153  KPMVGKDLCVNIELDGGG----------KRHISGLVTAARVVGHEGRSVTYELRMEPWVK  202

Query  121  LANLTSDFKIYQNKNVVDIIEEVFSDYNFPFEKRLATTYPILDFQVQYGETDFNFLQRLM  180
            L   TSD+K +QNK VVDI++EV+++Y +P EKRL  +YP+   QVQYGETDF+FLQRLM
Sbjct  203  LLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLM  262

Query  181  EEWGIYWFFEHQDHKQKLILVDHVGAHKRSFSTAYHAIEYLSDEPKAGEEYITQFQTQET  240
            +EWGIYW FEH ++ + L+L D ++AHK    ++   +E   +  K + E+I  + ++E+
Sbjct  263  QEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKEFIHTITANES  320

Query  241  LTSGTWVTNDYDFTKSRADILAMDSKPRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEE  300
            L +G WV +D+DFTK+R+ +    ++PR T+    E Y+WPGDY +   GE L+R+R+E 
Sbjct  321  LRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEA  380

Query  301  RGALGSRAVGSGQLRGIVCGANFELKGFPVDKANREYMIISSRLTVAEVDQLSGGEDAFS  360
            + + GSR +G+G++R ++ G  F L  +P    N+EY+++ + L V +  Q SG ++ F+
Sbjct  381  QRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFT  440

Query  361  CESSFTVQPTTKIYRHPQVTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKVRFVWDRYGT  420
              + F ++PT  ++R  +  +KP T+GPQ+AI+ GP+G+EIWTD+YGRVKV+F WDRYG 
Sbjct  441  FSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGK  500

Query  421  NSESDSCWLRVSQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWD  480
              E+ SCW+RVS +WAG++FG I IPRIGQEV+VD  NGDPD P+++G  YN+ T PPW+
Sbjct  501  MDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWG  560

Query  481  LPANATQSGMVSRTVGGGLTNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADS  540
            LP+ A+QSG+ S+++ GG TN N +RF+DK+G E+   +AE+D++   KNNET+ +  D 
Sbjct  561  LPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDR  620

Query  541  VLNVGANRSEVVGANYNQDVLGTSMLAIGAASMLQVGLARSVVVGGAHSL  590
               +  N ++ +G + N  V     L++  A  +++G +  + VG+  +L
Sbjct  621  TKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTL  670

54) Bphy_6124 in NC_010625


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  412 bits (1551),  Expect = 4e-116, Method: Compositional matrix adjust.
 Identities = 268/605 (45%), Positives = 399/605 (66%), Gaps = 31/605 (5%)

Query  7    NRTLTIDGPAIPLSSTGDPVLQLQSIAGTEILSRIYRYVLDCVTVSDLL----MTDAASL  62
             + +T+ G+A+P ++     L + S+ G E LS ++ YV++ +  +D L    ++ AA+L
Sbjct  97   AHNVTVSGSAVPPGA-----LLFASLDGGETLSELFSYVVQ-LKTPDTLNLGYVSPAANL  150

Query  63   DLKSMIGKELTVTVQLDGMGSFVPGMTGLSGAANIGKGIREISGIVTEARFVGQSNRQGH  122
             LK+M+GK+L V ++LDG G                   R+ISG+VT AR VG+  R   
Sbjct  151  PLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSVT  192

Query  123  YRLLLQPWITLADQQSTYRIFQNKTVVEIVDQVFGSYMFSWDKRLSAEYKELEYQVQYGE  182
            Y L ++PW+ L  + S Y+ FQNKTVV+I+D+V++ Y ++ +KRL   Y     QVQYGE
Sbjct  193  YELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGE  252

Query  183  TDFIFAQRLMQEHGIYWFFEHSNKIHRMVLVDQLGAHKPVDSAAYQTLQYYPPGHKIDME  242
            TDF F QRLMQE GIYW FEHS+  H +VL D ++AHK+   ++   ++    G K+D E
Sbjct  253  TDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKE  310

Query  243  YIDSFDASESIQSGRWTTSDFNFKKPRARLGTENALPRDTEFNELERYEWPGDYSDTAVG  302
            +I+++ A+ES+++G+W   DF+F KPR+ L+   A PR+T     E+YEWPGDY D + G
Sbjct  311  FIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEG  370

Query  303  EDFARIRMQELYAPGTRAWGSGNLRDVVCGTTFTLAGYPQQSANCEYLVVSASFAASELG  362
            E ++RIRM+   +PG+R  G+GN+R ++ G TFTL  YP    N EYL++ + +   + +
Sbjct  371  EMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA  430

Query  363  ESTGAGE-FSVRSSFVVQpatvvfrpprtvpkprttgpQTAIVTGPDGQEIWTDQYGRVK  421
            + +G ++ F+  + F ++P+  VFRP RTV+KP+T GPQ+AIVTGP GQEIWTDQYGRVK
Sbjct  431  QHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVK  490

Query  422  LKFHWDRSPVRNQKSSCWVRVAYPWAGNNFGTINIPRIGQEVIVDFENGDPDRPIVTGRV  481
            ++F WDR    +++SSCW+RV+YPWAG+ FG I+IPRIGQEV+VDF NGDPD PI+ GR 
Sbjct  491  VQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRT  550

Query  482  YNGANMPPWPLPDNATQSGTLSRSEDGNYETANAIRFEDKKGREEVWIHAEKDMRTEVEN  541
            YN   MPPW LP+ A+QSG +S+S  G    +N +RF+DK G EEV +HAEKD+ T V N
Sbjct  551  YNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKN  610

Query  542  DEVHAVEHDQTITINHDHTKHVGNDEQVDIGHDRTHRITQDDSLAVGRSLTLTVSKDYTG  601
            +E H+V  D+T TI  ++T+ +G+D +  +  +    +   +++ +G +  L V+ ++T 
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTL  670

Query  602  NVGNN  606
              GN 
Sbjct  671  RCGNA  675

55) BDL_6072 in NC_021877


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  403 bits (1515),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 255/547 (47%), Positives = 369/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  GGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
            +  SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

56) BMAA1901 in NC_006349


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  402 bits (1513),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 255/547 (47%), Positives = 368/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  VGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
               SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

57) BMA10229_1199 in NC_008835


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  402 bits (1513),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 255/547 (47%), Positives = 368/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  VGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
               SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

58) BMA10247_A2174 in NC_009079


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  402 bits (1513),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 255/547 (47%), Positives = 368/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  VGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
               SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

59) BMASAVP1_0912 in NC_008784


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  402 bits (1513),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 255/547 (47%), Positives = 368/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  VGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
               SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

60) BURPS1106A_A0251 in NC_009078


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  402 bits (1514),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 255/547 (47%), Positives = 369/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  GGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
            +  SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

61) BURPS1710b_A1703 in NC_007435


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  402 bits (1514),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 255/547 (47%), Positives = 369/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  GGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
            +  SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

62) BPC006_II0239 in NC_018529


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  402 bits (1514),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 255/547 (47%), Positives = 369/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  GGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
            +  SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

63) BPSS0181 in NC_006351


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  402 bits (1513),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 254/547 (47%), Positives = 369/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSQIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLS+++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE L+R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  GGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
            +  SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

64) BURPS668_A0342 in NC_009075


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  401 bits (1509),  Expect = 8e-113, Method: Compositional matrix adjust.
 Identities = 254/547 (47%), Positives = 369/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN++V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHFARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE ++R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  GGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
            +  SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

65) vgrG-3 in NC_017832


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  396 bits (1489),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 254/547 (47%), Positives = 368/547 (68%), Gaps = 27/547 (4%)

Query  5    SAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYtldcltppdpllAH-ERAAN  63
            ++A+ VTVSG+AVP       AL ++++ G+ETLSE++SY ++  TP    L+    AAN
Sbjct  95   PGAHNVTVSGSAVPPG-----ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAAN  149

Query  64   LDLKAMIGKALTVTVQLEGMGSFVpgmpgmagaanigagaREISGIVTGARFEGQLNRQC  123
            L LK+M+GK L V ++L+G G                   R+ISG+VT+AR  G+  R  
Sbjct  150  LPLKPMVGKDLCVNIELDGGGK------------------RHISGLVTAARVVGHEGRSV  191

Query  124  RYRLTMRPWIYLADLRSDYRIFQNWSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQVQYG  183
             Y L M PW+ L    SDY+ FQN +V +I+DEVL  Y+Y+ +KRL   YP    QVQYG
Sbjct  192  TYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYG  251

Query  184  ETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKIDA  243
            ETDF F+QRLMQE GIYW FEH+++ H +VL D ++AHK+   ++   +     G K+D 
Sbjct  252  ETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDK  309

Query  244  EYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREH  303
            E+I+ ++++E +R G+W  +DFDF KP + L+   A PR+T+H   E+YEWPGDY  + +
Sbjct  310  EFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSE  369

Query  304  GEHFARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATET  363
            GE ++R+RME  R+ G R  GGGN+R ++ G TF+L   P A  N+EYL++ + +   + 
Sbjct  370  GEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDN  429

Query  364  GGASGPGA-YRIDTSFVAQPATTAFrpprtvrkprtrgpQTAIVTGPRGQDIWTDQYGRV  422
            +  SG +  + + T F  +P+   FRP RTV KP+T+GPQ+AIVTGP GQ+IWTDQYGRV
Sbjct  430  AQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRV  489

Query  423  KLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTGQ  482
            K++F WDR    D+NSSCW+RVSY+W+G+ +G ++IPR+G EV+VDF +GDPD P++ G+
Sbjct  490  KVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGR  549

Query  483  VYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVE  542
             YN   MPPW LP  A+QSG+ ++S  GG  N+NMLRF+DK+G E+VK+HAE++ + +V 
Sbjct  550  TYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVK  609

Query  543  RDATTAV  549
             + T +V
Sbjct  610  NNETHTV  616

66) Bpet0519 in NC_010170


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  385 bits (1446),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 241/573 (43%), Positives = 358/573 (63%), Gaps = 25/573 (4%)

Query  9    RRTVVARTPLPGDMLAFRGMVGHEALSQLFEFDIDL----------ASPSHSLDMKQLLG  58
            +   V+ +++P + L F ++ G E+LS+LF + ++L           SP+ +L +K ++G
Sbjct  98   HNVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVG  157

Query  59   KPLTLDIQ-AAGGLRHLNGHITRCKLAGREGPTSRLYRYRATVRPWLWYLTQTSDSKIFQ  117
            K L ++I+  +GG RH++G +T  ++ G+EG +     Y   + PW+  LT+TSD K FQ
Sbjct  158  KDLCVNIELDGGGKRHISGLVTAARVVGHEGRSVT---YELRMEPWVKLLTHTSDYKAFQ  214

Query  118  NKSVPDVIREVLAEYPFPVEFKLAGSY--RNWEYCVQYQETDFAFISRLMEHEGIYYWFR  175
            NK+V D++ EVLAEYP+PVE +L  SY  R W+  VQY ETDF F+ RLM++ GIY WF 
Sbjct  215  NKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFE  272

Query  176  HDADRHTLVLADDITQHETCPGYDTIPYYGPDRITVPRQEYISSWEIAEQITPGAFATSD  235
            H  D HTLVLAD I+ H +CP+   +     + + + + E+I +    E +  G     D
Sbjct  273  HSEDSHTLVLADAISAHKACPDSPLVEWH-QEGLKLDK-EFIHTITANESLRTGQWVLDD  330

Query  236  YHFETPGADLQARRNNPGAYDHGDLEMYEWQGGYTNPADAERYTRIRLEELQCRQEQING  295
            ++F  P + L     NP   +H+  E YEW G+Y + +++E  TRIR+E  +    ++ G
Sbjct  331  FDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLG  390

Query  296  ACNVRGMAPGYLYTLRNHPRQAENREYLILSAHYRIQEAGEASGLDAA-AFDVGFTVLPS  354
            + N+R +  GY +TL N P    N+EYL++ +   +Q+ ++ SG D   +F   F + P+
Sbjct  391  GGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPT  450

Query  355  ATPFRAPRITPVPHTHGPQTARVVGKAGEQIWTDSYGRIKVQFHWDRYGQKNENSSCWVR  414
               FR+ R  + PHT GPQ+A V G AG++IWTD YGR+KVQF WDRYG+ +ENSSCW+R
Sbjct  451  REVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIR  510

Query  415  VSSPWAGGGFGGIQLPRVGDEVIIDFIGGHPDRPIVIGRVYNASNMPPWELPGNATQSGF  474
            VS PWAG GFG IQ+PR+G+EV++DF  G+PD PI++GR YN   MPPW LPG A+QSG+
Sbjct  511  VSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI  570

Query  475  LSRSRDGTPGNANALMFEDKPGSELVWLHAERDLTSEVEGNELHNTDGTRCTTIGSNDTT  534
            +S+S  G P N+N L F+DK G+E V +HAE+DL + V  NE H     R  TI  N+T 
Sbjct  571  FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETN  630

Query  535  VIGALGGGNRDITVHGTDRLQVDSTRNVNVDGA  567
             IG     +R+ TV   D L V  ++ +N++ +
Sbjct  631  SIGE----DRNTTVTKNDGLSVKLAQTINIGTT  659

67) Bcep18194_B1581 in NC_007511


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  379 bits (1423),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 225/561 (41%), Positives = 377/561 (68%), Gaps = 17/561 (3%)

Query  8    DSLHGDDLKFHTLDGSDELGRLFEFRIEA----------LADSHSLSLKDLLGKPVTVRI  57
             ++  + L F +LDG++ L+ LF + ++           ++ + +L+LK ++GK + V I
Sbjct  105  SAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNI  164

Query  58   EQQDLSTRYLNGIVARASLSGRRAERYYGYELIVRPWLWLATRRSDCRIFQNKTVPEIMQ  117
            E ++ + R ++G+V+ A + G+   R   YEL + PW+ L T+ SD + FQNKTV +I++
Sbjct  165  ELDGGGKRHISGLVTAARVVGH-EGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILD  223

Query  118  EVLATYGFPIENHLAESYVPRDYCVQYNETDAAFVSRLMEFEGIYFWFRHAEDTHTLMLG  177
            EVLA Y +P+E++L ESY  R   VQY ETD  F+ RLM+  GIY WF H+ED+HTL+L+
Sbjct  224  EVLAEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLA  283

Query  178  DAMSSHTVLPGYETIPYIARDRTAIA-DEEHIDGWLPAQEVSVGRHQTTDYDYTKPRADL  236
            DA+S+H    +    P + +++ ++  D E I+   + + +  G+    D+D+TKPR+ L
Sbjct  284  DAISAHK---ACPDSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLL  340

Query  237  SSQKVDPRGHDHDSFASFEWPGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGVAPG  296
            ++   +PR  +H ++  +EWPG+Y D + G   +R+R+E Q++   R  ++ ++R +  G
Sbjct  341  ANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTG  400

Query  297  YLFTLEHCPRADQNREYLIVRCQYRFQENAYASDQGAEAVVHQTMMLVQPSSLPYRSPRD  356
            Y FTLE+ P A+ N+EYL+++     Q+NA  S+Q+ +     T   ++P+   +R+ R 
Sbjct  401  YTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQD-QHFTFSTRFELHPTREVFRPQRT  459

Query  357  TPRPRTNGPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQDSSCWVRVSSPWAGGG  416
             ++P+T+GPQ+A V GP+G+EIWTDQYGRVK+QF WDRYG+ +++SSCW+RVS PWAG G
Sbjct  460  VSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKG  519

Query  417  FGGVQIPRVGDEVVVDFLNGDPDEPIVTGRVFNGEKMPPWGLPGSATQSGLLSRSSPGGT  476
            FG +QIPR+G+EV+VDF NGDPD PI+ GR +N + MPPWGLPG A+QSG++S+S  GG 
Sbjct  520  FGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGP  579

Query  477  TDHANAFRFEDKKGAEQLWMHAERNFDAETELDHSLSVGNNHTHTVGNDETMQVKNNRQR  536
            T+ +N +RF+DK GAE++  HAE+++++    +++ +V  ++T T+ ++ET  + ++R+ 
Sbjct  580  TN-GNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNT  638

Query  537  SVGQNETVNIGQNRVAQIGAN  557
            +V +N+ +++   +  +IG+ 
Sbjct  639  TVTKNDGLSVKLAQTINIGTT  659

68) Acav_3369 in NC_015138


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  375 bits (1411),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 251/584 (43%), Positives = 388/584 (67%), Gaps = 41/584 (7%)

Query  21   LQFRQLRGSEELSQLFSFDIDL----------LSEGRDIDPKALLGKTATVEIETEGGGK  70
            L F  L G+E LS+LFS+ ++L          +S + ++  K+++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  71   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  130
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  131  PMQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  188
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  189  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ  248
            H + P+++++     + +   D+E IH+ T  E ++ G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  249  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLATGYTFTLE  308
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L TGYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  309  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGSFQ-KFSLTAQPTSL  367
            NYP ++ N++YL+      +++N++ S+            ++++ +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  368  pytparttpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRVA  427
             + P RT +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENSSCW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  428  TSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIKT  487
             +WAG GFG I IPRIGQEV+VDF NGDPD PI+ G  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  488  KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKT  547
                   F++++  G+ ++N +RF+DK GAE+V +HA+KD    V N+E H V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  548  IDRDETNTIHRDRTETVDRDEKITVHNNRTERVDHDETISIGDN  591
            I ++ETN+I  DR  TV +++ ++V   +T  ++    + +GD+
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667


 Score = 44.5 bits (149),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 27/109 (25%), Positives = 63/109 (58%), Gaps = 8/109 (7%)

Query  671  NQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGKEMSV  730
            N++  V+++R+ T+ +++T  +G DR           V KN + +V   +T+++G    +
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNT--------TVTKNDGLSVKLAQTINIGTTYRL  662

Query  731  TVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNP  779
             VGD + ++CG+A L +  DG++++ G+ + +  S  + + + + ++NP
Sbjct  663  DVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNP  711

69) Daci_3868 in NC_010002


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  372 bits (1398),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 245/576 (43%), Positives = 377/576 (66%), Gaps = 29/576 (5%)

Query  12   ADQLQLRRLQGREEISHLF----------ALEIDLLSESDSIDPKALLGKGATVVVETQD  61
            ++ L +  L+G E +S+LF          +L+++ +S + ++  K+++GK+  V +E ++
Sbjct  109  PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDG  168

Query  62   GGKRYIDGLVTAFGMRGQDEHRNFLYRARLSPWLWLATRRSDFRIFQNKTVPDIINEVLG  121
            GGKR I GLVTA  + G++  R+  Y  R+ PW+ L T+ SD++ FQNKTV DI++EVL+
Sbjct  169  GGKRHISGLVTAARVVGHEG-RSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLA  227

Query  122  IYGHPMQQRLTRSY--RTWEYCVQYNETDFQFVSRLMEHEGICYYHQHSAGQHVLTLGDD  179
             Y  P+++RL  SY  RTW+  VQY ETDF+F+ RLM++ GI    +HS + H L L+D 
Sbjct  228  EYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADA  285

Query  180  IVASHDPLQGGAVIPFHPPGKAAVAREECIHAWELHQRVKPGRHYNDDYDFKKPRAELSN  239
            I ++H +  +++++  H  G       E IH+   ++ ++ G+   DD+DF KPR+ L+N
Sbjct  286  I-SAHKACPDSPLVEWHQEGLKL--DKEFIHTITANESLRTGQWVLDDFDFTKPRSLLAN  342

Query  240  MRRNPPGHAHDAYEIYEWPGGYTETGDGEDYIRVRLQQSLTRQSTVQGSSNHRAMAPGYT  299
               NP   +H +YE YEWPG+Y + ++GE   R+R++   +  S V G++N R++  GYT
Sbjct  343  TVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYT  402

Query  300  FTLDNYPRGDQNQAYLVTAVDYAFEENPRVSDGGSGEGSTQKFVLQAQPTSLPFKPQRIT  359
            FTL+NYP ++ NQ YL+       ++N++ S+ +     + +F L+  PT   F+PQR  
Sbjct  403  FTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELH--PTREVFRPQRTV  460

Query  360  AKPRTTGPQTAVVVGPAGEEIWCDQYGRVKVQFHWDRIGGMNENSSCWMRVATSWAGPGF  419
            +KP+T GPQ+A+V GPAG+EIW DQYGRVKVQF WDR G M+ENSSCW+RV+ +WAG GF
Sbjct  461  SKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGF  520

Query  420  GAVHIPRIGMEVIVDFLNGDPDYPIVMGCVYNASNMPPWALPANATQSGIKTRSSKGGAP  479
            G ++IPRIG EV+VDF NGDPD PI++G  YN   MPPW+LP+ A+QSGI ++S  GG+ 
Sbjct  521  GMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPT  580

Query  480  GAGMKNGQGDANAIRFEDKAGAEQLWLHAQKDQLTEVENDEDKWVGNDRRKTIDRDETNV  539
             + M         +RF+DK+GAE++ +HA+KD  T V N+E   V  DR KTI ++ETN 
Sbjct  581  NGNM---------LRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNS  631

Query  540  IHRDRTETVDRDETITVHNNRTERVDHNEKISIGDN  575
            I  DR  TV +++ ++V   +T  ++   ++ +GD+
Sbjct  632  IGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667


 Score = 38.5 bits (126),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 46/75 (62%), Gaps = 0/75 (0%)

Query  656  QSTTVLVDRSVRVQGNQQTTVGKRYAIQAGDELLITVGAASLVMKSDGTITINGKNIDVV  715
            ++TTV  + ++ V+  Q   +G  Y ++ GD++ +  G A+LV+  DG+I + GK++ + 
Sbjct  636  RNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLH  695

Query  716  GSKHIGLDSKRIDLN  730
             S  + L +K ID+N
Sbjct  696  TSDVMQLIGKGIDMN  710

70) VAPA_1c02360 in NC_022247


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  372 bits (1397),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 232/562 (42%), Positives = 355/562 (64%), Gaps = 25/562 (4%)

Query  2    PNRVVKAHTPLGEDQLLFRSMHGTEGLSQLFEFEVDL----------LSPSVSLDMKSVL  51
            ++ V  + +++  + LLF S++G E LS+LF + V+L          +SP+ +L +K+++
Sbjct  97   AHNVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMV  156

Query  52   GKPLSLEIQ-TAGEPRFLNGQIVRFTMVGKEGGSSRYVLYRATVRPWLWYLTRTSDCKIF  110
            GK L ++I+  +G  R ++G +    +VG EG   R V Y   + PW+  LT+TSD K F
Sbjct  157  GKDLCVNIELDGGGKRHISGLVTAARVVGHEG---RSVTYELRMEPWVKLLTHTSDYKAF  213

Query  111  QNKSVVDILQEVFADYNFAFEKKLSGTY--RQWEYCVQYQETDFAFVSRLMEHEGIYYYF  168
            QNK+VVDIL+EV+A+Y ++ EK+L  +Y  R W+  VQY ETDF F+ RLM++ GIY  F
Sbjct  214  QNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWF  271

Query  169  KHEKGEHTLVLADDIGAHETLPGYPKISYLAAD-RNPDPFQEVIDQWQVTEEIRPGTYVV  227
             H  + HTLVLAD I+AH + P+ P +     + +    F + I      E +R G  V+
Sbjct  272  EHSEDSHTLVLADAISAHKACPDSPLVEWHQEGLKLDKEFIHTIT---ANESLRTGQWVL  328

Query  228  DDYDFKKSKADLMGMRSQPRGNPHDTYEIYEWLGGFSEAEQGEHYSRIRLEEAQSQAERD  287
            DD+DF K+++ L    ++PR   H TYE YEW G++ +  +GE  +RIR+E  +S + R 
Sbjct  329  DDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRV  388

Query  288  VGHSSVRGMAPGYRFTMQNCPRQDDNREYLIVSVSYALREGGYESGAAESHYSFS--FAV  345
            +G +++R +  GY FT++N P  + N+EYL++     +++ + + ++ + H++FS  F +
Sbjct  389  LGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA-QHSGQDQHFTFSTRFEL  447

Query  346  QPTSYAFRPPRVTPMTRTNGPQTATVVGRAGQEYWVDQYGRVKVQFRWDRYGKSDENSSC  405
            +PT   FRP R  +  +T+GPQ+A V G AGQE W DQYGRVKVQF WDRYGK DENSSC
Sbjct  448  HPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSC  507

Query  406  WVRVSSAWAGSNYGAVNHPRKGQEVIVDFIGGHPDRPIIIGRVYNSDQMPPLELPAKVTV  465
            W+RVS +WAG  +G ++ PR GQEV+VDF  G+PD PII+GR YN D MPP  LP+  + 
Sbjct  508  WIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQ  567

Query  466  SGFVSRSQDGTPANANEFILDDAPGCELVRIHAEKDFELDVEADERDTIAGDRTTVIEGA  525
            SG+ S+S  G P+N+N + +DD  G E V++HAEKD++  V  +E +T+  DRT  I   
Sbjct  568  SGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKN  627

Query  526  DDYTTNTSLTETINGPHTVTVN  547
            +  +       T+   + ++V+
Sbjct  628  ETNSIGEDRNTTVTKNDGLSVK  649

71) BURPS1106A_A2808 in NC_009078


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  371 bits (1393),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 223/545 (41%), Positives = 368/545 (68%), Gaps = 17/545 (3%)

Query  13   DGLKFHTLDGSDELGRLFEFRIEA----------LADSHSLSLKDLLGKPVTVRIEQQGQ  62
            ++L F +LDG++ L+ LF + ++           ++ + +L+LK ++GK + V IE +G 
Sbjct  110  GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGG  169

Query  63   STRYLNGIVARASLAGRRAERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLST  122
            + R ++G+V+ A + G+   R   YEL + PW+ L T+ SD + FQNKTV +I++EVL+ 
Sbjct  170  GKRHISGLVTAARVVGH-EGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAE  228

Query  123  YGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEGIYYWFRHAEDTHTLMLSDAMSS  182
            Y +P+E++L ESY  R   VQY  TD  F+ RLM+  GIY WF H+ED+HTL+L+DA+S+
Sbjct  229  YPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISA  288

Query  183  HTALPGYETIPYIARDRTVIA-DVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQKV  241
            H A P+    P + +++  +  D E I+   +   +  G+    D+D+TKPR+ L++   
Sbjct  289  HKACPD---SPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVA  345

Query  242  DPRGHDHDSFASFEWPGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTL  301
            +PR  +H ++  +EWPG+Y D + G   +R+R+E Q++   R  ++ ++R    GY FTL
Sbjct  346  NPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTL  405

Query  302  AHCPRADRNREYLIVRCQYRFQENAYASDQGTEAVVHQTMMLVRPSSLPYRSPRETPRPR  361
             + P A+ N+EYL+++     Q+NA  S+Q+ +     T   ++P+   +R+ R  ++P+
Sbjct  406  ENYPTAEVNQEYLLMQTLLFVQDNAQHSGQD-QHFTFSTRFELHPTREVFRPQRTVSKPH  464

Query  362  TNGPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQDSSCWVRVSSPWAGGGFGGVQ  421
            T+GPQ+A V GP+G+EIWTDQYGRVK+QF WDRYG+ +++SSCW+RVS PWAG GFG +Q
Sbjct  465  TKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQ  524

Query  422  IPRVGDEVVVDFLNGDPDEPIVTGRVYNGERMPPWGLPGSATQSGLLSRSSPGGTTEHAN  481
            IPR+G+EV+VDF NGDPD PI+ GR YN + MPPWGLPG A+QSG++S+S  GG T ++N
Sbjct  525  IPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPT-NGN  583

Query  482  AFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQD  541
             +RF+DK GAE++  HAE+++++    +++ ++  D+T T+ ++ET  + ++R+ +V ++
Sbjct  584  MLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKN  643

Query  542  ETVNI  546
            + +++
Sbjct  644  DGLSV  648


 Score = 35.6 bits (115),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 25/105 (24%), Positives = 59/105 (57%), Gaps = 9/105 (8%)

Query  624  TVAEHHVEEIGE-RTSTIAHAHKLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGK  682
            T+  ++ + IGE R +T++  + L+V+  +++++G+    +V        GDQ +L CG+
Sbjct  623  TIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDV--------GDQFTLRCGN  674

Query  683  SSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTSSASVEHTVEG  727
            +++++  DG+I + G ++    SD   + GK +  ++    +V +
Sbjct  675  AALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA  719

72) BPC006_II2773 in NC_018529


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  371 bits (1394),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 223/545 (41%), Positives = 368/545 (68%), Gaps = 17/545 (3%)

Query  13   DGLKFHTLDGSDELGRLFEFRIEA----------LADSHSLSLKDLLGKPVTVRIEQQGQ  62
            ++L F +LDG++ L+ LF + ++           ++ + +L+LK ++GK + V IE +G 
Sbjct  110  GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGG  169

Query  63   STRYLNGIVARASLAGRRAERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLST  122
            + R ++G+V+ A + G+   R   YEL + PW+ L T+ SD + FQNKTV +I++EVL+ 
Sbjct  170  GKRHISGLVTAARVVGH-EGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAE  228

Query  123  YGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEGIYYWFRHAEDTHTLMLSDAMSS  182
            Y +P+E++L ESY  R   VQY  TD  F+ RLM+  GIY WF H+ED+HTL+L+DA+S+
Sbjct  229  YPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISA  288

Query  183  HTALPGYETIPYIARDRTVIA-DVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQKV  241
            H A P+    P + +++  +  D E I+   +   +  G+    D+D+TKPR+ L++   
Sbjct  289  HKACPD---SPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVA  345

Query  242  DPRGHDHDSFASFEWPGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTL  301
            +PR  +H ++  +EWPG+Y D + G   +R+R+E Q++   R  ++ ++R    GY FTL
Sbjct  346  NPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTL  405

Query  302  AHCPRADRNREYLIVRCQYRFQENAYASDQGTEAVVHQTMMLVRPSSLPYRSPRETPRPR  361
             + P A+ N+EYL+++     Q+NA  S+Q+ +     T   ++P+   +R+ R  ++P+
Sbjct  406  ENYPTAEVNQEYLLMQTLLFVQDNAQHSGQD-QHFTFSTRFELHPTREVFRPQRTVSKPH  464

Query  362  TNGPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQDSSCWVRVSSPWAGGGFGGVQ  421
            T+GPQ+A V GP+G+EIWTDQYGRVK+QF WDRYG+ +++SSCW+RVS PWAG GFG +Q
Sbjct  465  TKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQ  524

Query  422  IPRVGDEVVVDFLNGDPDEPIVTGRVYNGERMPPWGLPGSATQSGLLSRSSPGGTTEHAN  481
            IPR+G+EV+VDF NGDPD PI+ GR YN + MPPWGLPG A+QSG++S+S  GG T ++N
Sbjct  525  IPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPT-NGN  583

Query  482  AFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQD  541
             +RF+DK GAE++  HAE+++++    +++ ++  D+T T+ ++ET  + ++R+ +V ++
Sbjct  584  MLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKN  643

Query  542  ETVNI  546
            + +++
Sbjct  644  DGLSV  648


 Score = 36.1 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 25/105 (24%), Positives = 59/105 (57%), Gaps = 9/105 (8%)

Query  624  TVAEHHVEEIGE-RTSTIAHAHTLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGK  682
            T+  ++ + IGE R +T++  + L+V+  +++++G+    +V        GDQ +L CG+
Sbjct  623  TIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDV--------GDQFTLRCGN  674

Query  683  SSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTSSASVEHTVEG  727
            +++++  DG+I + G ++    SD   + GK +  ++    +V +
Sbjct  675  AALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA  719

73) DelCs14_2955 in NC_015563


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  371 bits (1395),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 243/576 (43%), Positives = 377/576 (66%), Gaps = 29/576 (5%)

Query  12   ADQLQLRRLQGREEISHLF----------ALEIDLLSESDSIDPKALLGKGATVVVETQD  61
            ++ L +  L+G E +S+LF          +L+++ +S + ++  K+++GK+  V +E ++
Sbjct  109  PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDG  168

Query  62   GGKRYIDGLVTAFGMRGQDEHRNFLYRARLSPWLWLATRRSDFRIFQNKTVPDIINEVLG  121
            GGKR I GLVTA  + G++  R+  Y  R+ PW+ L T+ SD++ FQNKTV DI++EVL+
Sbjct  169  GGKRHISGLVTAARVVGHEG-RSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLA  227

Query  122  IYGHPMQQRLTRSY--RTWEYCVQYNETDFQFVSRLMEHEGICYYHQHSAGQHVLTLGDD  179
             Y  P+++RL  SY  RTW+  VQY ETDF+F+ RLM++ GI    +HS + H L L+D 
Sbjct  228  EYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADA  285

Query  180  IVASHDPLQGGAVIPFHPPGKAAVAREECIHAWELHQRVKPGRHYNDDYDFKKPRAELSN  239
            I ++H +  +++++  H  G       E IH+   ++ ++ G+   DD+DF KPR+ L+N
Sbjct  286  I-SAHKACPDSPLVEWHQEGLKL--DKEFIHTITANESLRTGQWVLDDFDFTKPRSLLAN  342

Query  240  MRRNPPGHAHDAYEIYEWPGGYTETGDGEDYIRVRLQQSLTRQSTVQGSSNHRAMAPGYT  299
               NP   +H +YE YEWPG+Y + ++GE   R+R++   +  S V G++N R++  GYT
Sbjct  343  TVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYT  402

Query  300  FTLDNYPRGDQNQAYLVTAVNYAFEENPRVSDGGSGEGSTQKFVLQAQPTSLPFKPERIT  359
            FTL+NYP ++ NQ YL+       ++N++ S+ +     + +F L+  PT   F+P+R  
Sbjct  403  FTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELH--PTREVFRPQRTV  460

Query  360  AKPRTTGPQTAVVVGPAGEEIWCDQYGRVKVQFHWDRIGGMNENSSCWMRVATSWAGPGF  419
            +KP+T GPQ+A+V GPAG+EIW DQYGRVKVQF WDR G M+ENSSCW+RV+ +WAG GF
Sbjct  461  SKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGF  520

Query  420  GAVHIPRIGMEVIVDFLNGDPDYPIVMGCVYNASNMPPWALPANATQSGIKTRSSKGGAP  479
            G ++IPRIG EV+VDF NGDPD PI++G  YN   MPPW+LP+ A+QSGI ++S      
Sbjct  521  GMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHS------  574

Query  480  GAGLKNGQGDANAIRFEDKAGAEQLWLHAQKDQLTEVENDEDKWVGNDRRKTVDRDETNV  539
               L  G  ++N +RF+DK+GAE++ +HA+KD  T V N+E   V  DR KT+ ++ETN 
Sbjct  575  ---LYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNS  631

Query  540  IHRDRTETVDRDETITVHNNRTERVDHNEKISIGDN  575
            I  DR  TV +++ ++V   +T  ++   ++ +GD+
Sbjct  632  IGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667


 Score = 40.0 bits (132),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 47/75 (63%), Gaps = 0/75 (0%)

Query  656  QSTTVLVDRSVRVQGNQQTTVGKRYAIQAGDELSITVGAASLVMKSDGTITINGKNIDVV  715
            ++TTV  + ++ V+  Q   +G  Y ++ GD++++  G A+LV+  DG+I + GK++ + 
Sbjct  636  RNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLH  695

Query  716  GSKHIGLDSKRIDLN  730
             S  + L +K ID+N
Sbjct  696  TSDVMQLIGKGIDMN  710

74) Acav_0662 in NC_015138


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  371 bits (1395),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 249/565 (45%), Positives = 379/565 (68%), Gaps = 41/565 (7%)

Query  15   LQFRQLRGSEELSQLFSFDIDL----------LSEGRDIDPKALLGKTATVEIETEGGGK  64
            L F  L G+E LS+LFS+ ++L          +S + ++  K+++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  124
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PMQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  182
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  183  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ  242
            H + P+++++     + +   D+E IH+ T  E ++ G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLATGYTFTLE  302
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L TGYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGSFQ-KFSLTAQPTSL  361
            NYP ++ N++YL+      +++N++ S+            ++++ +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  362  pytparttpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRVA  421
             + P RT +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENSSCW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  422  TSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIKT  481
             +WAG GFG I IPRIGQEV+VDF NGDPD PI+ G  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  482  KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKT  541
                   F++++  G+ ++N +RF+DK GAE+V +HA+KD    V N+E H V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  542  IDRDETNTIHRDRTETVDRNEKITV  566
            I ++ETN+I  DR  TV +N+ ++V
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSV  648


 Score = 29.0 bits (90),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 0/50 (0%)

Query  574  VDGDETITIHSNRKERVDHNETISIGDNRSETVGINEDIRIGRNRTKTIG  623
            V  +ET T+  +R   +  NET SIG++R+ TV  N+++ +   +T  IG
Sbjct  608  VKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIG  657

75) Acav_3676 in NC_015138


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  370 bits (1391),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 248/565 (44%), Positives = 378/565 (67%), Gaps = 41/565 (7%)

Query  15   LQFRQLRGSEELSQLFSFDIDL----------LSEGRDIDPKALLGKTATVEIETEGGGK  64
            L F  L G+E LS+LFS+ ++L          +S + ++  K+++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  124
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PMQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  182
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  183  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ  242
            H + P+++++     + +   D+E IH+ T  E ++ G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLATGYTFTLE  302
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L TGYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGSFQ-KFSLTAQPTSL  361
            NYP ++ N++YL+      +++N++ S+            ++++ +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  362  pytparktpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRVA  421
             + P R  +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENSSCW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  422  TSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIKT  481
             +WAG GFG I IPRIGQEV+VDF NGDPD PI+ G  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  482  KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKT  541
                   F++++  G+ ++N +RF+DK GAE+V +HA+KD    V N+E H V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  542  IDRDETNTIHRDRTETVDRNEKITV  566
            I ++ETN+I  DR  TV +N+ ++V
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSV  648


 Score = 33.2 bits (106),  Expect = 0.065, Method: Compositional matrix adjust.
 Identities = 23/67 (35%), Positives = 48/67 (72%), Gaps = 1/67 (1%)

Query  675  NDIVGANWTRTvvgsdsvsvgsdRKASVSGADSLEVSGALTVK-AKTITLEAGDEITLRC  733
             + V  ++T+T++ +++ S+G DR+++V+  D+L V  A T++ + T  L+ GD++TLRC
Sbjct  613  THTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRC  672

Query  734  GSSTVRL  740
            G++++ L
Sbjct  673  GNAALVL  679


 Score = 31.9 bits (101),  Expect = 0.16, Method: Compositional matrix adjust.
 Identities = 19/67 (29%), Positives = 37/67 (56%), Gaps = 0/67 (0%)

Query  574  VDGDETITIHSNRKERVDHNETISIGDNRDETVGANEDIRIGNHRSKTVGQSEKDRIGTS  633
            V  +ET T+  +R   +  NET SIG++R+ TV  N+++ +   ++  +G + +  +G  
Sbjct  608  VKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667

Query  634  WNIRVGT  640
              +R G 
Sbjct  668  FTLRCGN  674


 Score = 29.0 bits (90),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 20/73 (28%), Positives = 42/73 (58%), Gaps = 2/73 (2%)

Query  570  RTEEVDGDETITIHSNR--KERVDHNETISIGDNRDETVGANEDIRIGNHRSKTVGQSEK  627
            R ++  G E + +H+++  +  V +NET ++  +R  T+  NE   IG++R+ TV +++ 
Sbjct  586  RFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDG  645

Query  628  DRIGTSWNIRVGT  640
              +  +  I +GT
Sbjct  646  LSVKLAQTINIGT  658


 Score = 26.6 bits (81),  Expect = 6.0, Method: Compositional matrix adjust.
 Identities = 20/69 (29%), Positives = 39/69 (57%), Gaps = 8/69 (11%)

Query  603  DETVGANEDIRIGNHRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQNVGLAKMVNV  662
            + TV  NE   +  +R+KT+ ++E + IG  +N  V   K + ++      V LA+ +N+
Sbjct  605  NTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVT--KNDGLS------VKLAQTINI  656

Query  663  GLAYSVNIG  671
            G +Y +++G
Sbjct  657  GTTYRLDVG  665

76) Vapar_3778 in NC_012791


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  370 bits (1389),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 238/571 (42%), Positives = 367/571 (65%), Gaps = 31/571 (5%)

Query  9    TPLGEDQLMFRSMHGTEGLSQLFEFEVEL----------LSPSMSIDMKAVLGKPLALEI  58
            +++  + L+F S++G E LS+LF + V+L          +SP+ ++ +K+++GK L ++I
Sbjct  105  SAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNI  164

Query  59   Q-TAGAPRFLNGQIVRFTMIGKEDGASRYVVYRATVRPWLWYLTRTSDCKIFQNKSVVDI  117
            +  +G+ R ++G +    ++G E   +R V Y   + PW+  LT+TSD K FQNK+VVDI
Sbjct  165  ELDGGGKRHISGLVTAARVVGHE---GRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDI  221

Query  118  LEEVFADYGFAFEKKLSASY--RQWEYCVQYQETDFAFVSRLMEHEGIYYYFTHEKGQHT  175
            L+EV+A+Y ++ EK+L  SY  R W+  VQY ETDF F+ RLM++ GIY  F H  + HT
Sbjct  222  LDEVLAEYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHT  279

Query  176  LVLADDIGAHETLPGYAKIGYLAADRGADPRQEVIDQWQVTEEIRPGSYVVDDFDFKKPR  235
            LVLAD I+AH + P+ + +     + G    +E I+     E +R G  V+DDFDF KPR
Sbjct  280  LVLADAISAHKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPR  337

Query  236  ADLMNMRSQPRGNEHGQYEMYEWLGGFSEAEQGEHYSRIRLEEAQAQAERDIGHTNVRGM  295
            + L N  ++PR   H+ YE YEW G++ +  +GE  +RIR+E  ++ + R +G  N+R +
Sbjct  338  SLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTL  397

Query  296  APGYRFTMQNCPRQEDNREYLVVSVSYALREGGYASGGAEGHYSFD--FAVQPSAYVFRA  353
              GY FT++N P  E N+EYL++     +++ +   +G + H++F   F ++P+  VFR+
Sbjct  398  MTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNA-QHSGQDQHFTFSTRFELHPTREVFRP  456

Query  354  PRVTPLPRTNGPQTATVVGKAGQEFWVDQYGRVKVQFRWDRYGKSDENSSCWVRVSSAWA  413
             R  + P+T+GPQ+A V G AGQE+W DQYGRVKVQF WDRYGK DENSSCW+RVS +WA
Sbjct  457  QRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWA  516

Query  414  GSNYGAVNHPRKGQEVVVDFIGGHPDRPIIIGRVYNADQMPPLELPAQVTVSGFVSRSQD  473
            G  +G ++ PR GQEV+VDF  G+PD PII+GR YN D MPP  LP+  + SG+ S+S  
Sbjct  517  GKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLY  576

Query  474  GSPANANEFILDDAPGCELVRIHAEKDFEIDVENDLRIHVENDETETVDGHRITHILKTD  533
            G+P+N+N + +DD  G E V++HAEK        DL   V N+ET+TV  +R   I+K +
Sbjct  577  GGPTNGNMLRFDDKTGAEEVKFHAEK--------DLNTTVKNNETHTVMVDRTKTIIKNE  628

Query  534  TLTVDQTRDTLVKQKDTAEYRNGSKLTVSGA  564
            T ++++ R+T V ++D    + +  + ++ +
Sbjct  629  TNSIGEDRNTTVTKNDGLSVKLAQTINIGTT  659

77) Aave_3486 in NC_008752


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  368 bits (1382),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 247/584 (43%), Positives = 383/584 (66%), Gaps = 41/584 (7%)

Query  15   LQFRQLRGSEELSQLFSFDIDL----------LSEGRDIDPKALLGKTATVEIETEGGGK  64
            L F  L G+E LS+LFS+ ++L          +S + ++  K+++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  124
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PLQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  182
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  183  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ  242
            H + P+++++     + +   D+E IH+ T  E ++ G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLE  302
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L  GYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNRQYLITGVTYHLHENPRTSSANSARPGETLKHNEEHGSFQ-KFSLTAQPTSL  361
            NYP ++ N++YL+      +++N++ S+            +++H +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  362  pytparktpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRVA  421
             + P R  +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENSSCW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  422  TSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIKT  481
             +WAG GFG I IPRIGQEV+VDF NGDPD PI+ G  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  482  KSSKGGAFGDGMKNGAGDANAICFEDKKGAEQVWLHAQKDQLTEVENDEDKWVGNDRRKT  541
                   F++++  G+ ++N + F+DK GAE+V +HA+KD  T V N+E   V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  542  IDRDETTIVHRDRTETVDRDEKITVHNNRTERVDHDETISIGDN  585
            I ++ET  +  DR  TV +++ ++V   +T  ++    + +GD+
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667


 Score = 44.5 bits (149),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 27/109 (25%), Positives = 63/109 (58%), Gaps = 8/109 (7%)

Query  665  NQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGKEMSV  724
            N++  V+++R+ T+ +++T  +G DR           V KN + +V   +T+++G    +
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNT--------TVTKNDGLSVKLAQTINIGTTYRL  662

Query  725  KVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNP  773
             VGD + ++CG+A L +  DG++++ G+ + +  S  + + + + ++NP
Sbjct  663  DVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNP  711

78) BURPS1710b_A1173 in NC_007435


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  368 bits (1384),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 221/545 (41%), Positives = 367/545 (68%), Gaps = 17/545 (3%)

Query  13   DGLKFHTLDGSDELGRLFEFRIEA----------LADSHSLSLKDLLGKPVTVRIEQQGQ  62
            ++L F +LDG++ L+ LF + ++           ++ + +L+LK ++GK + V IE +G 
Sbjct  110  GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGG  169

Query  63   STRYLNGIVARASLAGRRAERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLST  122
            + R ++G+V+ A + G+   R   YEL + PW+ L T+ SD + FQNKTV +I++EVL+ 
Sbjct  170  GKRHISGLVTAARVVGH-EGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAE  228

Query  123  YGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEGIYYWFRHAEDTHTLMLSDAMSS  182
            Y +P+E++L ESY  R   VQY  TD  F+ RLM+  GIY WF H+ED+HTL+L+DA+S+
Sbjct  229  YPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISA  288

Query  183  HTALPGYETIPYIARDRTVIA-DVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQKV  241
            H A P+    P + +++  +  D E I+   +   +  G+    D+D+TKPR+ L++   
Sbjct  289  HKACPD---SPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVA  345

Query  242  DPRGHDHDSFASFEWQGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTL  301
            +PR  +H ++  +EW G+Y D + G   +R+R+E Q++   R  ++ ++R    GY FTL
Sbjct  346  NPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTL  405

Query  302  AHCPRADRNREYLIVRCQYRFQENAYASDQGTEAVVHQTMMLVRPSSLPYRSPRETPRPR  361
             + P A+ N+EYL+++     Q+NA  S+Q+ +     T   ++P+   +R+ R  ++P+
Sbjct  406  ENYPTAEVNQEYLLMQTLLFVQDNAQHSGQD-QHFTFSTRFELHPTREVFRPQRTVSKPH  464

Query  362  TNGPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQDSSCWVRVSSPWAGGGFGGVQ  421
            T+GPQ+A V GP+G+EIWTDQYGRVK+QF WDRYG+ +++SSCW+RVS PWAG GFG +Q
Sbjct  465  TKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQ  524

Query  422  IPRVGDEVVVDFLNGDPEEPIVTGRVYNGERMPPWGLPGSATQSGLLSRSSPGGTTEHAN  481
            IPR+G+EV+VDF NGDP+ PI+ GR YN + MPPWGLPG A+QSG++S+S  GG T ++N
Sbjct  525  IPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPT-NGN  583

Query  482  AFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQD  541
             +RF+DK GAE++  HAE+++++    +++ ++  D+T T+ ++ET  + ++R+ +V ++
Sbjct  584  MLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKN  643

Query  542  ETVNI  546
            + +++
Sbjct  644  DGLSV  648


 Score = 36.4 bits (118),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 25/105 (24%), Positives = 59/105 (57%), Gaps = 9/105 (8%)

Query  624  TVAEHHVEEIGE-RTSTIAHAHTLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGK  682
            T+  ++ + IGE R +T++  + L+V+  +++++G+    +V        GDQ +L CG+
Sbjct  623  TIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDV--------GDQFTLRCGN  674

Query  683  SSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTTSASVEHTVEG  727
            +++++  DG+I + G ++    SD   + GK +  ++    +V +
Sbjct  675  AALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA  719

79) Acav_3111 in NC_015138


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  368 bits (1383),  Expect = 8e-103, Method: Compositional matrix adjust.
 Identities = 247/565 (44%), Positives = 380/565 (68%), Gaps = 41/565 (7%)

Query  15   LQFRQLRGSEELSQLFSFDIDL----------LSEGRDIDPKALLGKTATVEIETEGGGK  64
            L F  L G+E LS+LFS+ ++L          +S + ++  K+++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  124
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PMQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  182
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  183  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ  242
            H + P+++++     + +   D+E IH+ T  E ++ G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLATGYTFTLE  302
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L TGYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGSFQ-KFSLTAQPTSL  361
            NYP ++ N++YL+      +++N++ S+            ++++ +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  362  pytparttpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRVA  421
             + P RT +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENSSCW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  422  TSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT  481
             +WAG GFG I IPRIG+EV+VDF NGDPD P++VG  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  482  KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKT  541
                   F++++  G+ ++N +RF+DK GAE+V +HA+KD    V N+E H V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  542  IDRDETNTIHRDRTETVDRDEKITV  566
            I ++ETN+I  DR  TV +++ ++V
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSV  648


 Score = 33.2 bits (106),  Expect = 0.067, Method: Compositional matrix adjust.
 Identities = 23/67 (35%), Positives = 48/67 (72%), Gaps = 1/67 (1%)

Query  675  NDIVGANWTRTvvgsdsvsvgsdRKASVSGADSLEVSGALTVK-AKTITLEAGDEITLRC  733
             + V  ++T+T++ +++ S+G DR+++V+  D+L V  A T++ + T  L+ GD++TLRC
Sbjct  613  THTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRC  672

Query  734  GSSTVRL  740
            G++++ L
Sbjct  673  GNAALVL  679


 Score = 31.9 bits (101),  Expect = 0.18, Method: Compositional matrix adjust.
 Identities = 19/67 (29%), Positives = 37/67 (56%), Gaps = 0/67 (0%)

Query  574  VDGDETITIHSNRKERVDHNETISIGDNRDETVGANEDIRIGNHRSKTVGQSEKDRIGTS  633
            V  +ET T+  +R   +  NET SIG++R+ TV  N+++ +   ++  +G + +  +G  
Sbjct  608  VKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667

Query  634  WNIRVGT  640
              +R G 
Sbjct  668  FTLRCGN  674


 Score = 29.0 bits (90),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 20/73 (28%), Positives = 42/73 (58%), Gaps = 2/73 (2%)

Query  570  RTEEVDGDETITIHSNR--KERVDHNETISIGDNRDETVGANEDIRIGNHRSKTVGQSEK  627
            R ++  G E + +H+++  +  V +NET ++  +R  T+  NE   IG++R+ TV +++ 
Sbjct  586  RFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDG  645

Query  628  DRIGTSWNIRVGT  640
              +  +  I +GT
Sbjct  646  LSVKLAQTINIGT  658


 Score = 26.6 bits (81),  Expect = 6.0, Method: Compositional matrix adjust.
 Identities = 20/69 (29%), Positives = 39/69 (57%), Gaps = 8/69 (11%)

Query  603  DETVGANEDIRIGNHRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQNVGLAKMVNV  662
            + TV  NE   +  +R+KT+ ++E + IG  +N  V   K + ++      V LA+ +N+
Sbjct  605  NTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVT--KNDGLS------VKLAQTINI  656

Query  663  GLAYSVNIG  671
            G +Y +++G
Sbjct  657  GTTYRLDVG  665

80) Aave_2127 in NC_008752


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  367 bits (1379),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 248/584 (43%), Positives = 383/584 (66%), Gaps = 41/584 (7%)

Query  15   LQFRQLRGSEELSQLFSFDIDL----------LSEARDIDPKALLGKTATVEIETEGGGK  64
            L F  L G+E LS+LFS+ ++L          +S A ++  K+++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  124
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PMQLKLTRAY--RAWDYCVQYGERDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  182
            P++ +L  +Y  R+W+  VQYGE DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  183  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ  242
            H + P+++++     + +   D+E IH+ T  E ++ G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDAYEIYEWPGGYVQHGDGEQYTRVRLQEGLTGHSTVRGESRHRSLAPGYTFTLE  302
            P   +H +YE YEWPG+Y + ++GE  TR+R++   +  S V G +  R+L  GYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGSFQ-KFSLTAQPTSL  361
            NYP ++ N++YL+      +++N++ S+            ++++ +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  362  pytparktpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRVA  421
             + P R  +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENSSCW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  422  TSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIKT  481
             +WAG GFG I IPRIGQEV+VDF NGDPD PI+ G  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  482  KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLTEVENDEDKWVGNDRRKT  541
                   F++++  G+ ++N +RF+DK GAE++ +HA+KD  T V N+E   V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  542  IDRDETTIVHRDRTETVDRDEKITVHNNRTERVDHDETISIGDN  585
            I ++ET  +  DR  TV +++ ++V   +T  ++    + +GD+
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667


 Score = 38.5 bits (126),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 16/100 (16%)

Query  665  TQSTNVLLGRSVTVGQSQTTKVGEDWTQTTGKN----------------IRIQAGDSIEL  708
             ++  V+++R+ T+ +++T  +GED+  T  KN                 R++ GD + L
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTL  670

Query  709  VCGASVLRMEKGGQVTINGKEIDVVGTKHIGLDSKRIDLN  748
             CG + L ++K+G + + GK++ +  +  + L +K ID+N
Sbjct  671  RCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMN  710

81) Aave_2735 in NC_008752


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  366 bits (1377),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 243/584 (42%), Positives = 383/584 (66%), Gaps = 41/584 (7%)

Query  25   LQFRQLRGSEELSQLFSFDIDL----------LSEGREIDPKTLLGKTATVEIETEGGGK  74
            L F  L G+E LS+LFS+ ++L          +S + ++  K ++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  75   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  134
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  135  PMQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  192
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  193  HEPLPGAAVIPFYPPEKSATADRENIHAWSLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ  252
            H + P+++++     + +   D+E IH+ +  E ++ G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  253  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLE  312
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L  GYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  313  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGEALKHNEEQGSFQ-KFSLTAQPTSL  371
            NYP ++ N++YL+      +++N++ S+            ++++ +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  372  pytparktpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSICWMRVA  431
             + P R  +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENS CW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  432  TSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT  491
             +WAG GFG I IPRIG+EV+VDF NGDPD P++VG  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  492  KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLTEVENDEDKWVGQDRRKT  551
                   F++++  G+ ++N +RF+DK GAE++ +HA+KD  T V N+E   V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  552  IDRDETTIVHRDRTETVDRDEKITVHNNRTERVDHDETISIGDN  595
            I ++ET  +  DR  TV +++ ++V   +T  ++    + +GD+
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667


 Score = 30.3 bits (95),  Expect = 0.49, Method: Compositional matrix adjust.
 Identities = 20/63 (32%), Positives = 38/63 (61%), Gaps = 8/63 (12%)

Query  603  DETVSIGKNRTKTIGRNEKDKIGNNWSIKVGKMKTETIGIAYMQNVGVGRMENVGVAYNL  662
            +ET ++  +RTKTI +NE + IG++++  V   K + +++   Q +      N+G +Y L
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVT--KNDGLSVKLAQTI------NIGTTYRL  662

Query  663  NVG  665
            +VG
Sbjct  663  DVG  665


 Score = 26.9 bits (82),  Expect = 5.5, Method: Compositional matrix adjust.
 Identities = 20/79 (26%), Positives = 41/79 (52%), Gaps = 8/79 (10%)

Query  571  DEKITVHNNRTERVDHDETISIGDNRREDVGIDETVSIGKNRTKTIGRNEKDKIGNNWSI  630
            + K+  +++    V ++ET ++  +R   +  +ET SIG +R  T+ +N+        ++
Sbjct  595  EVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKND--------GL  646

Query  631  KVGKMKTETIGIAYMQNVG  649
             V   +T  IG +Y  +VG
Sbjct  647  SVKLAQTINIGTTYRLDVG  665

82) Aave_4009 in NC_008752


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  365 bits (1372),  Expect = 6e-102, Method: Compositional matrix adjust.
 Identities = 245/564 (44%), Positives = 378/564 (68%), Gaps = 39/564 (6%)

Query  15   LQFRQLRGSEELSQLFSFDIDL----------LSEGRDIDPKALLGKTATVEIETEGGGK  64
            L F  L G+E LS+LFS+ ++L          +S + ++  K+++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  124
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PMQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  182
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  183  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKSGRYYNDDYDFRKPRSDLSNMRQQ  242
            H + P+++++     + +   D+E IH+ T  E +++G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSVVKGESRHRSLATGYTFTLE  302
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L TGYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGLFQKFSLTAQPTSLp  362
            NYP ++ N++YL+      +++N++ S+           ++++  +  +F L  +PT   
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG-----------QDQHFTFSTRFEL--HPTREV  453

Query  363  ytparktpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRVAT  422
            + P R  +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENSSCW+RV+ 
Sbjct  454  FRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSY  513

Query  423  SWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKTK  482
            +WAG GFG I IPRIG+EV+VDF NGDPD P++VG  YN   MPPW+LPG A+QSGI   
Sbjct  514  PWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI---  570

Query  483  SSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLIEVENDEDHWVGQDRRKTI  542
                  F++++  G+ ++N +RF+DK GAE++ +HA+KD    V N+E H V  DR KTI
Sbjct  571  ------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTI  624

Query  543  DRDETNVIHRDRTETVDRNEKITV  566
             ++ETN I  DR  TV +N+ ++V
Sbjct  625  IKNETNSIGEDRNTTVTKNDGLSV  648


 Score = 36.6 bits (119),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 24/67 (36%), Positives = 49/67 (74%), Gaps = 1/67 (1%)

Query  675  SDIVGANWTRTVIgsdsvsvgsdRKASVSGTDSLEVSGALTVK-ARTITLEAGDEITLRC  733
            ++ V  ++T+T+I +++ S+G DR+++V+  D+L V  A T++ + T  L+ GD++TLRC
Sbjct  613  THTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRC  672

Query  734  GSSTVRL  740
            G++++ L
Sbjct  673  GNAALVL  679


 Score = 32.2 bits (102),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 18/67 (27%), Positives = 37/67 (56%), Gaps = 0/67 (0%)

Query  574  VDGDETITIHSNRKERVDHDETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTS  633
            V  +ET T+  +R   +  +ET SIG++R+ TV  N+++ +   ++  +G + +  +G  
Sbjct  608  VKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667

Query  634  WNIRVGT  640
              +R G 
Sbjct  668  FTLRCGN  674


 Score = 27.7 bits (85),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 20/69 (29%), Positives = 39/69 (57%), Gaps = 8/69 (11%)

Query  603  DETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQNVGLAKMVNV  662
            + TV  NE   +  +R+KT+ ++E + IG  +N  V   K + ++      V LA+ +N+
Sbjct  605  NTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVT--KNDGLS------VKLAQTINI  656

Query  663  GLAYSVNIG  671
            G +Y +++G
Sbjct  657  GTTYRLDVG  665

83) Aave_2047 in NC_008752


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  362 bits (1361),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 247/565 (44%), Positives = 381/565 (68%), Gaps = 41/565 (7%)

Query  15   LQFRQLRGSEELSQLFSFDIDL----------LSEGRDIDPKALLGKTATVEIETEGGGK  64
            L F  L G+E LS+LFS+ ++L          +S + ++  K+++GK   V+IE +GGGK
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  124
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PLQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  182
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  183  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKSGRYYNDDYDFRKPRSDLSNMRQQ  242
            H + P+++++     + +   D+E IH+ T  E +++G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEWH--QEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSVVKGESRHRSLATGYTFTLE  302
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L TGYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGESLKHNEEQGSFQ-KFSLTAQPTSL  361
            NYP ++ N++YL+      +++N++ S+            ++++ +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  362  pytparttpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRVA  421
             + P RT +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENSSCW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  422  TSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT  481
             +WAG GFG I IPRIG+EV+VDF NGDPD P++VG  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  482  KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLIEVENDEDHWVGQDRRKT  541
                   F++++  G+ ++N +RF+DK GAE++ +HA+KD    V N+E H V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  542  IDRDETNTIHRDRTETVDRNEKITV  566
            I ++ETN+I  DR  TV +N+ ++V
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSV  648

84) Bcep18194_B1827 in NC_007511


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  362 bits (1360),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 229/513 (45%), Positives = 334/513 (66%), Gaps = 27/513 (5%)

Query  7    NRTFSVSGPALPELEGIASVLHLSAIQGTEQLSTLYAYELWLTTPAdpllp-vdlltnld  65
             +  +VSG+A+P     ++ L +++++G E LS L++Y + L TP    L  V   +NL 
Sbjct  97   AHNVTVSGSAVP-----PGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLP  151

Query  66   lKAMLGKELTVTIQLDGMGSFVAGMAGQVGAAHLGAGAREISGVVTAASYVDQLNRQSRY  125
            LK+M+GK+L V I+LDG                  +G R+ISG+VTAA  V++  R   Y
Sbjct  152  LKPMVGKDLCVNIELDG------------------GGKRHISGLVTAARVVGHEGRSVTY  193

Query  126  RVVLEPWFALARERTDYRIFQRKSVLDILREVFGSYLYSFEMRVGRTYKPLRYQVQYGES  185
             + +EPW  L  + +DY+ FQ K+V+DIL EV++ Y Y+ E R+  +Y     QVQYGE+
Sbjct  194  ELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESYPVRTWQVQYGET  253

Query  186  DFAFAQRLMEEHGITWFFEHSQGVHRLVLVDGPGAHRAVESIAYQTLAYYPPGQKIDREH  245
            DF F QRLM+E GI W FEHS++ H LVL D+ +AH+A    +   +     G K+D+E 
Sbjct  254  DFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPL--VEWHQEGLKLDKEF  311

Query  246  VDHFEATERLQSGVWTTDDFDFEKPGATLTAQNRLPRDTAHNQFERYEWPGDYTETEDGR  305
            ++ + A E L++G W  DDFDF KP + L+     PR+T+H  +E+YEWPGDY +  +G 
Sbjct  312  IHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGE  371

Query  306  AFALVRMEEIHAQGERAKGEGNLRNVVCGTTFALAGHPMASANREYLVIASELDVTETGE  365
             ++ +RME  ++ G R  G GN+R ++ G TF+L   P A  N+EYL++ + L V + ++
Sbjct  372  MLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQ  431

Query  366  TTGFSA-YAIRSKFVVQPSTTVFRPLRTIRKPRTRGPQTAIVTGPAGAEIWTNKNGEVTL  424
             +G    +++ ++F ++P+  VFRP RT+ KP+T+GPQ+AIVTGPAG EIWT++ G V +
Sbjct  432  HSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKV  491

Query  425  KFHWDRSDVKDQNSSCWVRVSYPWAGSNFGGIHIPRVGTEVIVDFENGDPDRPIVTGRVY  484
            +F WDR +  D+NSSCW+RVSYPWAG  FG I+IPR+G EV+VDF NGDPD PI+ GR Y
Sbjct  492  QFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTY  551

Query  485  NAMTMPPWTLPANATQSGILTRSTKGGDTATPM  517
            N  TMPPW LP+ A+QSGI+++S  GG T   M
Sbjct  552  NQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNM  584

85) Aave_3752 in NC_008752


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  361 bits (1358),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 245/565 (44%), Positives = 376/565 (67%), Gaps = 42/565 (7%)

Query  15   LQFRQLRGSEELSQLFSFDIDL----------LSEGRDIDPKALLGKTATVEIETEGG-K  63
            L F  L G+E LS+LFS+ ++L          +S + ++  K+++GK   V+IE +GG K
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  64   RYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGY  123
            R + GLVT   + G++ R  +Y+LR++PW+ + T+  D++ FQ KTV +I++EVL+ Y Y
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  124  PLQLKLTRAY--RAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVAG  181
            P++ +L  +Y  R+W+  VQYGE+DFDF+ RL+++ G Y  F+H+ + HTLV+AD I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  182  HEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ  241
            H + P+++++     + +   D+E IH+ T  E ++ G+   DD+DF KPRS L+N   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  242  PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLE  301
            P   +H +YE YEWPG+Y + ++GE  +R+R++   +  S V G +  R+L  GYTFTLE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  302  NYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGETLKHNEEHGSFQ-KFSLTAQPTSL  360
            NYP ++ N++YL+      +++N++ S+            +++H +F  +F L  +PT  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSG------------QDQHFTFSTRFEL--HPTRE  452

Query  361  pytparktpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSICWMRVA  420
             + P R  +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G MDENS CW+RV+
Sbjct  453  VFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVS  512

Query  421  TSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT  480
             +WAG GFG I IPRIG+EV+VDF NGDPD P++VG  YN   MPPW+LPG A+QSGI  
Sbjct  513  YPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI--  570

Query  481  KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKT  540
                   F++++  G+ ++N +RF+DK GAE+V +HA+KD    V N+E H V  DR KT
Sbjct  571  -------FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKT  623

Query  541  IDRDETNTIHRDRTETVDRNEKITV  565
            I ++ETN+I  DR  TV +N+ ++V
Sbjct  624  IIKNETNSIGEDRNTTVTKNDGLSV  648


 Score = 36.4 bits (118),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 24/67 (36%), Positives = 48/67 (72%), Gaps = 1/67 (1%)

Query  674  NDIVGANWTRTVIgsdsvsvgsdRKASVSGTDSLEVSGALTVK-ARTITLEAGDEITLRC  732
             + V  ++T+T+I +++ S+G DR+++V+  D+L V  A T++ + T  L+ GD++TLRC
Sbjct  613  THTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRC  672

Query  733  GSSTVRL  739
            G++++ L
Sbjct  673  GNAALVL  679


 Score = 32.7 bits (104),  Expect = 0.096, Method: Compositional matrix adjust.
 Identities = 20/67 (30%), Positives = 38/67 (57%), Gaps = 0/67 (0%)

Query  573  VDGDETITIHSNRTERVDHNETISIGDNRDETVGANEDIRIGSHRSKTVGQSEKDRIGTS  632
            V  +ET T+  +RT  +  NET SIG++R+ TV  N+++ +   ++  +G + +  +G  
Sbjct  608  VKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667

Query  633  WNIRVGT  639
              +R G 
Sbjct  668  FTLRCGN  674


 Score = 27.2 bits (83),  Expect = 4.7, Method: Compositional matrix adjust.
 Identities = 20/69 (29%), Positives = 39/69 (57%), Gaps = 8/69 (11%)

Query  602  DETVGANEDIRIGSHRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQNVGLAKMVNV  661
            + TV  NE   +  +R+KT+ ++E + IG  +N  V   K + ++      V LA+ +N+
Sbjct  605  NTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVT--KNDGLS------VKLAQTINI  656

Query  662  GLAYSVNIG  670
            G +Y +++G
Sbjct  657  GTTYRLDVG  665

86) Varpa_2908 in NC_014931


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  353 bits (1325),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 231/554 (42%), Positives = 351/554 (64%), Gaps = 25/554 (4%)

Query  9    TPLGEEQLKFRSMRGTEGLSQLFELEVDL----------LSPSAALDLKSVLGKPLSLEI  58
            +++    L F S+ G E LS+LF   V+L          +SP+A L LK+++GK L ++I
Sbjct  105  SAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNI  164

Query  59   RTAGARPRFLNGQVVRFSMVGREGGTSRHTVYRASVRPWLWYLMRSSDNKIFQNKSVVEI  118
               G+  R ++G V    +VG+EG   R   Y   + PW+  L ++SD K FQNK+VV+I
Sbjct  165  ELDGGGKRHISGLVTAARVVGHEG---RSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDI  221

Query  119  LEEVLGDYGFAFEKKLGGSY--RTWEYCVQYNESDFAFVSRLMELEGIYYWFRHEKGQHT  176
            L+EVL++Y ++ EK+L  SY  RTW+  VQY E+DF F+ RLM+  GIY WF H  + HT
Sbjct  222  LDEVLAEYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHT  279

Query  177  LVLADDAGAHEPMPDYETIDYFAADRDIGEDLEVIRDWQPGEEVRSGSYTVDDFNFTTPK  236
            LVLAD  +AH + PD   ++    +  ++ ++  I+   + E +R+G   +DDF+FT P+
Sbjct  280  LVLADAISAHKACPDSPLVEWHQEGLKLDKEF--IHTITANESLRTGQWVLDDFDFTKPR  337

Query  237  GDLVNVRSQPRAHDNAGYEMYEWLGDYPAAGDGEHYARVRLEESQALAQRSAGSSTVRGM  296
            + L N  ++PR  ++A YE YEW GDY   ++GE  +R+R+E  ++ + R  G++ +R +
Sbjct  338  SLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTL  397

Query  297  APGYTFRMRNSPRSDDNQEYLVVAVSYALREGGYASGAARGEYNFD--FMVQPSALAFRA  354
              GYTF + N P ++ NQEYL++     +++ +  SG  + ++ F   F ++P+   FR+
Sbjct  398  MTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQ-HFTFSTRFELHPTREVFRP  456

Query  355  PRQTPVPRTSGPQTATVVGPEGEEIWTDEYGRVKVQFHWDRYGQKNENSSRFVRVSHIWA  414
             R  + P+T GPQ+A V GP G+EIWTD+YGRVKVQF WDRYG+ +ENSS  +RVS  WA
Sbjct  457  QRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWA  516

Query  415  GERFGGVFTPRIGQEVVVDFIGGRVDRPVIVGRVYNADQMPPFALPGEATKSGIVTRSSK  474
            G  FG +  PRIGQEV+VDF  G  D P+IVGR YN D MPP +LPG A++SGI ++S  
Sbjct  517  GKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLY  576

Query  475  GGSGANANAFVFEDKMGAEQILLHAERNLDVEVEGDETHTTDKTRSTLIKGHESATYESG  534
            GG+ +N+N + F+DK GAE++ +HAE++L+  V  +ETHT    R+  I  +E+ +   G
Sbjct  577  GGP-TNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSI--G  633

Query  535  EERHITAGAVETID  548
            E+R+ T    + + 
Sbjct  634  EDRNTTVTKNDGLS  647

87) GEM_4203 in NC_018514


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  353 bits (1325),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 226/556 (41%), Positives = 372/556 (67%), Gaps = 17/556 (3%)

Query  13   DDLTFHTLDGCEALGQLFEFRIEA----------LADSHSLSLKDLLGKPVTVRIEQQDL  62
            + L F +LDG E+L++LF + ++           ++ + +L+LK ++GK + V IE ++ 
Sbjct  110  GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGG  169

Query  63   STRYLNGIVARASLAGRRAERHYGYELVVRPWLWLATRRSDCRIFQNRTVPDIVQEVLAP  122
            + R ++G+V+ A + G+   R   YEL + PW+ L T+ SD + FQN+TV DI++EVLA 
Sbjct  170  GKRHISGLVTAARVVGH-EGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAE  228

Query  123  YGFPIENKLTEAYVPREYCVQYNETDTAFVTRLMEFEGIYFHFRHAADHHTLVLSDAMSS  182
            Y +P+E++L E+Y  R   VQY ETD  F+ RLM+  GIY  F H+ D HTLVL+DA+S+
Sbjct  229  YPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISA  288

Query  183  HVALPGYETIPYIAPDRTAIA-DEEHIDGWLPAQEVSVGKHQTTDYDYTKPRADLSSQKV  241
            H A P+    P +  ++ ++  D E I+   + + +  G+    D+D+TKPR+ L++   
Sbjct  289  HKACPD---SPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVA  345

Query  242  DPRGHDHDSFASFEWPGGYRDDTPGAHYSRVRLEEQQAEHERASADTDVRGVAPGYVFTL  301
            +PR  +H ++  +EWPG+Y D + G   +R+R+E Q++   R  ++ ++R +  GY FTL
Sbjct  346  NPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTL  405

Query  302  EHCPRADQNREYLIVRCRYRFQENAYASDQGAEAVVHRTIMLVQPSSLpfrsprdtprpr  361
            E+ P A+ N+EYL+++     Q+NA  S+Q+ +      + L +P+   FR+ R  ++P+
Sbjct  406  ENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFEL-HPTREVFRPQRTVSKPH  464

Query  362  tsGPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQDSSCWVRVSSPWAGGGFGGVQ  421
            T GPQ+A V GP+G+EIWTDQYGRVK+QF WDRYG+ +++SSCW+RVS PWAG GFG +Q
Sbjct  465  TKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQ  524

Query  422  IPRVGDEVVVDFLNGDPDEPIVTGRVFNGEKMPPWGLPGSATQSGLLSRSSPGGTTDHAN  481
            IPR+G+EV+VDF NGDPD PI+ GR +N + MPPWGLPG A+QSG++S+S  GG T+ +N
Sbjct  525  IPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTN-GN  583

Query  482  AFRFEDKKGAEQLWMHAERNFDAETELDHSLSVGNNHTHTVGNDETMQVNHNRQRSVGQN  541
             +RF+DK GAE++  HAE+++++    +++ +V  ++T T+ ++ET  + ++R+ +V +N
Sbjct  584  MLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKN  643

Query  542  ETVNIGQHRVAQVGGN  557
            + +++   +  ++G  
Sbjct  644  DGLSVKLAQTINIGTT  659


 Score = 44.5 bits (149),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 29/114 (26%), Positives = 63/114 (56%), Gaps = 9/114 (7%)

Query  615  QTTSQDMTTLVASSHTEEIGA-RTSTIAKAHTLTVGGEHTVNVGANHTTNVQHQVLVAAG  673
            +T   D T  +  ++T+ IG  R +T++K + L+V   +T+N+G+    +V        G
Sbjct  614  HTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDV--------G  665

Query  674  DQLMLMCGASSILMKRDGTIAIQGINVTSTGTESHSVNGKTVTSSATGEHTVEG  727
            DQ+ L CG +++++ +DG+I + G ++    ++   + GK +  ++ G  +V +
Sbjct  666  DQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA  719

88) Daci_4483 in NC_010002


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  348 bits (1306),  Expect = 9e-97, Method: Compositional matrix adjust.
 Identities = 244/580 (43%), Positives = 376/580 (65%), Gaps = 37/580 (6%)

Query  15   LHFRELRGQENISQLFS----------LDVEMLSESESIDPKALLGKNATIEIETQGGGR  64
            L F  L G E +S+LFS          L++  +S + ++  K+++GK+  ++IE +GGG+
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RFIDGIVTRFGMQGQDHRHYAYKARLSPWLWLATRKSDFRIFQNQTVPDIIEQVLGVYGH  124
            R I G+VT   + G++ R  +Y  R+ PW+ L T+ SD++ FQN+TV DI+++VL+ Y  
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PLQKKLTRAY--RSWDYCVQYNESDCDFVSRLMEHEGIYYFFEHASGQHTLVLCDDIIAS  182
            P++K+L  +Y  R+W+  VQY E+D DF+ RLM++ GIY  FEH+ + HTLVL  D I++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVL-ADAISA  288

Query  183  HSVLPGGASIPFYPPEKAAAGDQENIHAWQLEQEIKPGRHYSDDYDFKKPRADLTHLRRD  242
            H   P+++ +     + +   D+E IH+   ++ ++ G+   DD+DF KPR+ L++   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDGHEIYEWPGGYTQLSDGEDYIRVRLKESLTGQSRVRGQSCHRALATGYTFSLY  302
            P   +H   E YEWPG+Y + S+GE   R+R+    +  SRV G +  R+L TGYTF+L 
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNQQYLITGLSYHLKENPRVSAVAPGAKGSAAEDGSFQ-RYELQAQPTSLAYtp  361
            NYP ++ NQ+YL+      +++N++         ++  ++ +F  R+EL+  PT   + P
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQ--------HSGQDQHFTFSTRFELH--PTREVFRP  456

Query  362  arttpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMNENSSCWIRVATNWA  421
             RT +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G M+ENSSCWIRV+  WA
Sbjct  457  QRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWA  516

Query  422  GPGFGAISIPRIGHEVVVDFLNGDPDYPLVTGCVYNAANMPPWALPANATQSGIKTRSSK  481
            G GFG I IPRIG+EV+VDF NGDPD P++ G  YN   MPPW+LP+ A+QSGI ++S  
Sbjct  517  GKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHS--  574

Query  482  ggaagagLKNGPGDANAIRFEDKAGAEQLWLHAQKDQLTEVENDEDKWVGNDRRKTIDRD  541
                   L  GP ++N +RF+DK+GAE++ +HA+KD  T V N+E   V  DR KTI ++
Sbjct  575  -------LYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKN  627

Query  542  ETNIIHRDRTETVDRDETITVHNNRTERVDHNEKISIGDN  581
            ETN I  DR  TV +++ ++V   +T  ++   ++ +GD+
Sbjct  628  ETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667


 Score = 27.4 bits (84),  Expect = 3.9, Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 40/72 (56%), Gaps = 0/72 (0%)

Query  575  KISIGDNRNEDVGIDENISIGKNRSKTVGKTETDKIGQNWHVTVGLLKTQTIGMAYMQNV  634
            K+    + N  V  +E  ++  +R+KT+ K ET+ IG++++ TV      ++ +A   N+
Sbjct  597  KFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINI  656

Query  635  GVMKMMNIGVNY  646
            G    +++G ++
Sbjct  657  GTTYRLDVGDQF  668

89) DelCs14_0306 in NC_015563


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  348 bits (1307),  Expect = 9e-97, Method: Compositional matrix adjust.
 Identities = 242/580 (42%), Positives = 376/580 (65%), Gaps = 37/580 (6%)

Query  15   LHFRELRGQENISQLFS----------LDVEMLSESESIDPKALLGKNATIEIETQGGGR  64
            L F  L G E +S+LFS          L++  +S + ++  K+++GK+  ++IE +GGG+
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RFIDGIVTRFGMQGQDHRHYAYKARLSPWLWLATRKSDFRIFQNQTVPDIIEQVLGAYGH  124
            R I G+VT   + G++ R  +Y  R+ PW+ L T+ SD++ FQN+TV DI+++VL+ Y  
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PLQKKLTRAY--RSWDYCVQYNESDCDFVSRLMEHEGIYYFFEHASGQHTLVLCDDIIAS  182
            P++K+L  +Y  R+W+  VQY E+D DF+ RLM++ GIY  FEH+ + HTLVL  D I++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVL-ADAISA  288

Query  183  HSVLPGGASIPFYPPEKAAAGDQENIHAWHLEQEIKSGRHYSDDYDFKKPRADLTHLRRD  242
            H   P+++ +     + +   D+E IH+   ++ +++G+   DD+DF KPR+ L++   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDGHEIYEWPGGYTQLSDGEDYIRVRLKESLTGQSRVRGQSCHRALATGYTFSLY  302
            P   +H   E YEWPG+Y + S+GE   R+R+    +  SRV G +  R+L TGYTF+L 
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNQQYLITGLSYHLKENPRVSAVAPGAKGSAAEDGSFQ-RYELQAQPTSLAYtp  361
            NYP ++ NQ+YL+      +++N++         ++  ++ +F  R+EL+  PT   + P
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQ--------HSGQDQHFTFSTRFELH--PTREVFRP  456

Query  362  arttpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGGMNENSSCWIRVATNWA  421
             RT +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G M+ENSSCWIRV+  WA
Sbjct  457  QRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWA  516

Query  422  GPGFGAISIPRIGHEVVVDFLNGDPDYPLVTGCVYNAANMPPWALPANATQSGIKTRSSK  481
            G GFG I IPRIG+EV+VDF NGDPD P++ G  YN   MPPW+LP+ A+QSGI ++S  
Sbjct  517  GKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHS--  574

Query  482  ggaagagLKNGPGDANAIRFEDKAGQEQLWLHAQKDQLTEVENDEDKWVGNDRRKTVDRD  541
                   L  GP ++N +RF+DK+G E++ +HA+KD  T V N+E   V  DR KT+ ++
Sbjct  575  -------LYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKN  627

Query  542  ETNVIHRDRTETVDRDETITVHNNRTERVDHNEKISIGDN  581
            ETN I  DR  TV +++ ++V   +T  ++   ++ +GD+
Sbjct  628  ETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667

90) DelCs14_2325 in NC_015563


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  346 bits (1299),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 240/580 (42%), Positives = 376/580 (65%), Gaps = 37/580 (6%)

Query  15   LHFRELRGQENISQLFS----------LDVEMLSESESIDPKALLGKNATIEIETQGGGR  64
            L F  L G E +S+LFS          L++  +S + ++  K+++GK+  ++IE +GGG+
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RFIDGIVTRFGMQGQDHRHYAYKARLSPWLWLATRKSDFRIFQNQTVPDIIEQVLGVYGH  124
            R I G+VT   + G++ R  +Y  R+ PW+ L T+ SD++ FQN+TV DI+++VL+ Y  
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PLQKKLTRAY--RSWDYCVQYNESDCDFVSRLMEHEGIYYFFEHASGQHTLVLCDDIIAS  182
            P++K+L  +Y  R+W+  VQY E+D DF+ RLM++ GIY  FEH+ + HTLVL  D I++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVL-ADAISA  288

Query  183  HSVLPGGASIPFYPPEKAAAGDQENIHAWQLEQEIKSGRHYSDDYDFKKPRADLTHLRRD  242
            H   P+++ +     + +   D+E IH+   ++ +++G+   DD+DF KPR+ L++   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDGHEIYEWPGGYTQLSDGEDYIRVRLKESLTGQSRVRGQSCHRALATGYTFSLY  302
            P   +H   E YEWPG+Y + S+GE   R+R+    +  SRV G +  R+L TGYTF+L 
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNQQYLITGLSYHLKENPRVSAVAPGAKGSAAEDGSFQ-RYELQAQPTSLAYtp  361
            NYP ++ NQ+YL+      +++N++         ++  ++ +F  R+EL+  PT   + P
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQ--------HSGQDQHFTFSTRFELH--PTREVFRP  456

Query  362  arttpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGGMNENSSCWIRVATNWA  421
             RT +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G M+ENSSCWIRV+  WA
Sbjct  457  QRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWA  516

Query  422  GPGFGAISIPRIGHEVVVDFLNGDPDYPLVTGCVYNAANMPPWALPANATQSGIKTRSSK  481
            G GFG I IPRIG+EV+VDF NGDPD P++ G  YN   MPPW+LP+ A+QSGI ++S  
Sbjct  517  GKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHS--  574

Query  482  ggaagagMKNGPGDANAIRFEDKAGQEQLWLHAQKDQLTEVENDEDKWVGNDRRKTVDRD  541
                   +  GP ++N +RF+DK+G E++ +HA+KD  T V N+E   V  DR KT+ ++
Sbjct  575  -------LYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKN  627

Query  542  ETSVIHRDRTETVDRDETITVHNNRTERVDHNEKVSIGDN  581
            ET+ I  DR  TV +++ ++V   +T  ++   ++ +GD+
Sbjct  628  ETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667

91) BPSS2056 in NC_006351


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  345 bits (1294),  Expect = 8e-96, Method: Compositional matrix adjust.
 Identities = 221/545 (41%), Positives = 364/545 (67%), Gaps = 17/545 (3%)

Query  13   DGLKFHTLDGSDELGRLFEFRIEA----------LADSHSLSLKDLLGKPVTVRIEQQGQ  62
            ++L F +LDG++ L+ LF + ++           ++ + +L+LK ++GK + V IE +G 
Sbjct  110  GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGG  169

Query  63   STRYLNGIVARASLAGRRAERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLST  122
            + R ++G+V+ A + G+   R   YEL + PW+ L T+ SD + FQNKTV +I++EVL+ 
Sbjct  170  GKRHISGLVTAARVVGH-EGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAE  228

Query  123  YGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEGIYYWFRHAEDTHTLMLSDAMSS  182
            Y +P+E++L ESY  R   VQY  TD  F+ RLM+  GIY WF H+ED+HTL+L+DA+S+
Sbjct  229  YPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISA  288

Query  183  HTALPGYETIPYIARDRTVIA-DVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQKV  241
            H A P+    P + +++  +  D E I+   +   +  G+    D+D+TKPR+ L++   
Sbjct  289  HKACPD---SPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVA  345

Query  242  DPRGHDHDSFASFEWQGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTL  301
            +PR  +H ++  +EW G+Y D + G   +R+R+E Q++   R  ++ ++R    GY FTL
Sbjct  346  NPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTL  405

Query  302  AHCPRADRNREYLIVRCQYRFQENAYASDQGTEAVVHQTMMLVRPSSLpyrppretprpr  361
             + P A+ N+EYL+++     Q+NA  S+Q+ +     T   ++P+   +RP R  ++P+
Sbjct  406  ENYPTAEVNQEYLLMQTLLFVQDNAQHSGQD-QHFTFSTRFELHPTREVFRPQRTVSKPH  464

Query  362  tnepQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQDSSCWVRVSSPWAGGGFGGVQ  421
            T+ PQ+A V GP+G+EIWTDQYGRVK+QF WDRYG+ +++SSCW+RVS PWAG GFG +Q
Sbjct  465  TKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQ  524

Query  422  IPRVGDEVVVDFLNGDPDEPIVTGRVYNGEKMPPWGLPESATQSGLLSRSSPGGTTEHAN  481
            IPR+G+EV+VDF NGDPD PI+ GR YN + MPPWGLP  A+QSG++S+S  GG T ++N
Sbjct  525  IPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPT-NGN  583

Query  482  AFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQG  541
             +RF+DK GAE++  HAE+++++    +++ ++  D+T T+ ++ET  + ++R+ +V + 
Sbjct  584  MLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKN  643

Query  542  ETVNI  546
            + +++
Sbjct  644  DGLSV  648


 Score = 35.6 bits (115),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 25/105 (24%), Positives = 59/105 (57%), Gaps = 9/105 (8%)

Query  624  TVAEHHVEEIGE-RTSTIAHAHKLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGK  682
            T+  ++ + IGE R +T++  + L+V+  +++++G+    +V        GDQ +L CG+
Sbjct  623  TIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDV--------GDQFTLRCGN  674

Query  683  SSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTTSASVEHTVEG  727
            +++++  DG+I + G ++    SD   + GK +  ++    +V +
Sbjct  675  AALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA  719

92) PT7_0359 in NC_015458


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  344 bits (1292),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 224/549 (41%), Positives = 348/549 (64%), Gaps = 21/549 (3%)

Query  8    STSLPGDTLIFRSLHGEEELSTLFEFEVEM----------LSESHSLDLKQLLSQPLTMS  57
            ++++P ++L+F SL+G E LS LF + V++          +S + +L LK ++++ L ++
Sbjct  104  GSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVN  163

Query  58   IDLGMAGTRYLNGQVIRCKLIGRASATSRYYIYRAVVRPWLWYLTQTTDSKIFQEKSVPD  117
            I+L+ +G R ++G V   +++G+ +   R   Y   + PW+  LT+T+D K FQ+K+V D
Sbjct  164  IELDGGGKRHISGLVTAARVVGHEG---RSVTYELRMEPWVKLLTHTSDYKAFQNKTVVD  220

Query  118  VIREVLADYEFPSEFKLTGSY--RTWEYCVQYQETDFAFISRLMEHEGIYYWFRHEDGKH  175
            ++ EVLA+Y +P E +L  SY  RTW+  VQY ETDF F+ RLM++ GIY WF H ++ H
Sbjct  221  ILDEVLAEYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSH  278

Query  176  VLVLTDDVSQQEPFPGLETLPYIG-PDRVVQPDKEHISRWEPAEQVTPGKFATVDYDFKK  234
             LVL+D +S + + P+    P +   +  ++ DKE I    + E +  G+    D+DF K
Sbjct  279  TLVLADAISAHKACPDS---PLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTK  335

Query  235  PAASLDALRSNPGAYANGDLEVYEWMGGYTEPDQGEHYSQVRLEALQAQQSQVTGHSNAH  294
            P + L    +NP   +++  E YEW G+Y +  +GE  +++R+EA ++  S+V G +N +
Sbjct  336  PRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIR  395

Query  295  ALAPGRLLTLFNHPRQVENREYLIQKVVYHVQESDYSSTGDDISQFEVDFAAIPSSLPFR  354
            +L  G  +TL N P    N+EYL+ + +  VQ++   S  D+   F   F   P+   FR
Sbjct  396  TLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFR  455

Query  355  PARVTPLPRTHGPQTARVVGKPGEQIWTDRYGCVKVQFRWDRYGQTNENSSCWVRVSSPW  414
            P R  + P+T GPQ+A V G +G++IWTD+YG VKVQF WDRYG+ +ENSSCW+RVS PW
Sbjct  456  PQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPW  515

Query  415  AGGGFGGIQLPRVDDEVIVDFIGGHPDRPIIIGRVFNASNMPPWDLPGNATQSGFLSRSK  474
            AG GFG IQ+PR+++EV+VDF  G+PD PII+GR +N   MPPW+LPG A+QSG++S+S 
Sbjct  516  AGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSL  575

Query  475  DGDRNTANALMFEDVAGGERIWLHAERDLTTEVEANELHTVDGDRNTVIAGNDTLTVMAA  534
             G+   +N L F+D +G+E + +HAE+DL T V  NE HTV  DR   I  N+T ++   
Sbjct  576  YGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGED  635

Query  535  RTSTTQGQE  543
            R +T   ++
Sbjct  636  RNTTVTKND  644

93) Daci_0300 in NC_010002


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  343 bits (1288),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 241/580 (42%), Positives = 375/580 (65%), Gaps = 37/580 (6%)

Query  15   LHFRELRGQENISQLFS----------LDVEMLSESESIDPKALLGKNATIEIETQGGGR  64
            L F  L G E +S+LFS          L++  +S + ++  K+++GK+  ++IE +GGG+
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RFIDGIVTRFGMQGQDHRHYAYKARLSPWLWLATRKSDFRIFQNQTVPDIIEQVLGVYGH  124
            R I G+VT   + G++ R  +Y  R+ PW+ L T+ SD++ FQN+TV DI+++VL+ Y  
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PLQRKLTRAY--RSWDYCVQYNESDCDFVSRLMEHEGIYYHFAHAMGEHTLVLCDDIIAS  182
            P++++L  +Y  R+W+  VQY E+D DF+ RLM++ GIY  F H+ + HTLVL  D I++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVL-ADAISA  288

Query  183  HSVLPGGASIPFYPPEKAAAGDQENIHAWQLEQEIKSGRHYSDDYDFKKPRADLTHLRRD  242
            H   P+++ +     + +   D+E IH+   ++ +++G+   DD+DF KPR+ L++   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDGHEIYEWPGGYTQLSDGEDYIRVRLKESLTGQSRVRGQSCHRALATGYTFSLY  302
            P   +H   E YEWPG+Y + S+GE   R+R+    +  SRV G +  R+L TGYTF+L 
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNQQYLITGLSYHLKENPRVSAVAPGAKGSAAEDGSFQ-RYELQAQPTSLAYtp  361
            NYP ++ NQ+YL+      +++N++         ++  ++ +F  R+EL+  PT   + P
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQ--------HSGQDQHFTFSTRFELH--PTREVFRP  456

Query  362  arttpkprttgpqtAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMNENSSCWIRVATNWA  421
             RT +KP+T GPQ+A+V GPAG+EIWTD+YGR+KVQF WDR G M+ENSSCWIRV+  WA
Sbjct  457  QRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWA  516

Query  422  GPGFGAISIPRIGHEVVVDFLNGDPDYPLVTGCVYNAANMPPWALPANATQSGIKTRSSK  481
            G GFG I IPRIG+EV+VDF NGDPD P++ G  YN   MPPW+LP+ A+QSGI ++S  
Sbjct  517  GKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLY  576

Query  482  GGAPGAGMKNGQGDANAIRFEDKAGAEQLWLHAQKDQLTEVENDEDKWVGNDRRKTIDRD  541
            GG+  + M         +RF+DK+GAE++ +HA+KD  T V N+E   V  DR KTI ++
Sbjct  577  GGPTNGNM---------LRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKN  627

Query  542  ETSVIHRDRTETVDRNETITVHNNRTERVDHDEKISIGDN  581
            ET+ I  DR  TV +N+ ++V   +T  ++   ++ +GD+
Sbjct  628  ETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667


 Score = 28.2 bits (87),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 42/76 (56%), Gaps = 0/76 (0%)

Query  571  DHDEKISIGDNRNEDVGIDENISIGKNRSKTIGKTETDKIGQNWHVTVGLLKTQTIGMAY  630
             ++ K+    + N  V  +E  ++  +R+KTI K ET+ IG++++ TV      ++ +A 
Sbjct  593  AEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQ  652

Query  631  MQNVGVMKMMNIGVNY  646
              N+G    +++G ++
Sbjct  653  TINIGTTYRLDVGDQF  668

94) Varpa_2907 in NC_014931


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  342 bits (1283),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 232/560 (42%), Positives = 354/560 (64%), Gaps = 25/560 (4%)

Query  3    RVVTAHTPLGEEQLKFRSMRGTEGLSQLFE----------LEVDLLSPSAALDLKSVLGK  52
             V  + +++    L F S+ G E LS+LF           L+++ +SP+A L LK+++GK
Sbjct  99   NVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGK  158

Query  53   PLSLEIRTAGARPRFLNGQVVRFSMVGREGGTSRYTVYRASVRPWLWYLMRSSDNKIFQN  112
             L ++I   G+  R ++G V    +VG+EG   R   Y   + PW+  L ++SD K FQN
Sbjct  159  DLCVNIELDGGGKRHISGLVTAARVVGHEG---RSVTYELRMEPWVKLLTHTSDYKAFQN  215

Query  113  KSVVEILEEVLGDYGFAFEKKLGGSY--RTWEYCVQYNESDFAFVSRLMELEGIYYWFRH  170
            K+VV+IL+EVL++Y ++ EK+L  SY  RTW+  VQY E+DF F+ RLM+  GIY WF H
Sbjct  216  KTVVDILDEVLAEYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEH  273

Query  171  EKGQHTLVLADDAGAHEPMPDYETIDYFAADRDIGEDLEVIRDWQPGEEVRSGSYTVDDF  230
              + HTLVLAD  +AH + PD   ++    +  ++ ++  I+   + E +R+G   +DDF
Sbjct  274  SEDSHTLVLADAISAHKACPDSPLVEWHQEGLKLDKEF--IHTITANESLRTGQWVLDDF  331

Query  231  NFTTPKGDLVNVRSQPRAHDNAGYEMYEWLGDYPAAGDGEHYARVRLEESQALAQRSAGS  290
            +FT P++ L N  ++PR  ++A YE YEW GDY   ++GE  +R+R+E  ++ + R  G+
Sbjct  332  DFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGG  391

Query  291  STVRGMAPGYTFRMRNSPRSDDNQEYLVVAVSYALREGGYASGAARGEYNFD--FMVQPS  348
            + +R +  GYTF + N P ++ NQEYL++     +++ +  SG  + ++ F   F ++P+
Sbjct  392  GNIRTLMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQ-HFTFSTRFELHPT  450

Query  349  ALAFRAPRQTPVPRTSGPQTATVVGPEGEEIWTDEYGRVKVQFHWDRYGQKNENSSRFVR  408
               FR+ R  + P+T GPQ+A V GP G+EIWTD+YGRVKVQF WDRYG+ +ENSS  +R
Sbjct  451  REVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIR  510

Query  409  VSHIWAGERFGGVFTPRIGQEVVVDFIGGRVDRPVIVGRVYNADQMPPFALPGEATKSGI  468
            VS  WAG  FG +  PRIGQEV+VDF  G  D P+IVGR YN D MPP +LPG A++SGI
Sbjct  511  VSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI  570

Query  469  VTRSSKGGSGANANAFVFEDKMGAEQILLHAERNLDVEVEGDEthttdktrttLIKGHES  528
             ++S  GG+ +N+N + F+DK GAE++ +HAE++L+  V  +ETHT    RT  I  +E+
Sbjct  571  FSHSLYGGP-TNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNET  629

Query  529  ATYESGEERHITAGAVETID  548
             +   GE+R+ T    + + 
Sbjct  630  NSI--GEDRNTTVTKNDGLS  647

95) VAPA_1c26900 in NC_022247


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  341 bits (1282),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 223/554 (41%), Positives = 352/554 (64%), Gaps = 27/554 (4%)

Query  9    TALNAEQLKFRAMRGQEGLSQLFEFEVDM----------VSPSFNLDLKTLLGTSLTVEL  58
            +A+ +  L F ++ G E LS+LF + V++          VSP+ NL LK ++G  L V++
Sbjct  105  SAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNI  164

Query  59   Q-DEGASRFLNGTVVRFELVGRANETGRHYIYRALVQPWLWYLTRTTDCRIFQNKSVPDV  117
            + D G+ R ++G V    +VG+    GR   Y   ++PW+  LT+T+D + FQNK+V D+
Sbjct  165  ELDGGGKRHISGLVTAARVVGHE---GRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDI  221

Query  118  LEEVLGKYGFEYEKRLTGSY--RPWEYCVQYQESDFAFVCRLMEHEGIAYHFEHRNGSHL  175
            L+EVL+ Y +  EKRL  SY  R W+  VQY E+DF F+ RLM++ GI   FEH ++SH 
Sbjct  222  LDEVLAEYPYPVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHT  279

Query  176  LVLADDVGGYGTLPGHATIAYRPRD-RVVNAMEPCIDQWRISEQITSGRVMLDDFDFRKS  234
            LVLAD +++  + P+ + +  +  + ++ +     I     +E + +G+ +LDDFDF K+
Sbjct  280  LVLADAISAHKACPDSPLVEWHQEGLKLDKEFIHTITA---NESLRTGQWVLDDFDFTKP  336

Query  235  RASLQSVQQDPKGHDHSTYEVYEWLGGYSENDQGDSYAKIRLQELQCAHELATGHTNVAG  294
            R+ L +   +P+  +H+TYE YEW G+Y ++ +G+  ++IR++  + +     G  N+  
Sbjct  337  RSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRT  396

Query  295  MAPGYLFQMTHCPREADNREYLVTQTRYDLQEPEYSTGGTAESVCEFDFTVLPSNVAYRP  354
            +  GY F + + P    N+EYL+ QT   +Q+    +G   +      F + P+   +RP
Sbjct  397  LMTGYTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRP  456

Query  355  ARKTPKPRTNGPQTATVVGP--EEIWTDRFGRVKLQFRWDRYGQSDENSSCWVRVSSNWA  412
             R  +KP+T+GPQ+A V GP  +EIWTD++GRVK+QF WDRYG+ DENSSCW+RVS  WA
Sbjct  457  QRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWA  516

Query  413  GANYGTMHMPRVGQEVIVDFIGGEPDRPIITGRVYNNDQMPPWELPANATASGILTRSST  472
            G  +G +++PR+GQEV+VDF  G+PD PII GR YN+D MPPW LP+ A+ SGI+++S  
Sbjct  517  GKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLY  576

Query  473  GGAANQANMLRFEDRTGAEQILLHAERNLDVEVEADEthttdgtrttLIKGHESATYQSG  532
            GG++N +NMLRF+D+TGAE++ +HAE++L+  V  +ETHT    RT  I  +E+ +   G
Sbjct  577  GGPTN-GNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNS--IG  633

Query  533  ETRDITAGAKETIT  546
            E R+ T   ++ ++
Sbjct  634  EDRNTTVTKNDGLS  647

96) Daci_0698 in NC_010002


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  337 bits (1266),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 236/569 (42%), Positives = 363/569 (64%), Gaps = 45/569 (7%)

Query  15   LHFRELRGQENISQLFS----------LDVEMLSESESIDPKALLGKNATIEIETQGGGR  64
            L F  L G E +S+LFS          L++  +S + ++  K+++GK+  ++IE +GGG+
Sbjct  112  LLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGK  171

Query  65   RFIDGIVTRFGMQGQDHRHYAYKARLSPWLWLATRKSDFRIFQNQTVPDIIEQVLGVYGH  124
            R I G+VT   + G++ R  +Y  R+ PW+ L T+ SD++ FQN+TV DI+++VL+ Y  
Sbjct  172  RHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPY  231

Query  125  PLQRKLTRAY--RSWDYCVQYNESDCDFVSRLMEHEGIYYHFAHAMGEHTLVLCDDIIAS  182
            P++++L  +Y  R+W+  VQY E+D DF+ RLM++ GIY  F H+ + HTLVL D I ++
Sbjct  232  PVEKRLVESYPVRTWQ--VQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  183  HGVLPGGASIPFYPPEKAAAGDQENIHAWQLEQEIKPGRHYIDDYDFKKPRAELSHMRRD  242
            H   P+++ +     + +   D+E IH+   ++ ++ G+  +DD+DF KPR+ L++   +
Sbjct  289  HKACPDSPLVEW--HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  243  PPGHAHDGHETYEWPGGYTEYGDGEAYIRVRLKESLTGQSRVRGQSCHRALATGYTFSLY  302
            P   +H   E YEWPG+Y + ++GE   R+R+    +  SRV G +  R+L TGYTF+L 
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  303  NYPRGDQNQQYLITGLSYHLKENPRVSAITSVRGVPSAPSARDGAKEEGSFQ-RYELQAQ  361
            NYP ++ NQ+YL+      +++N++                + G  ++ +F  R+EL+  
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQ----------------HSGQDQHFTFSTRFELH--  448

Query  362  PTSLAYtparttpkprttgpqtAVVVGPAGQEIWTDEYGRIKVQFHWDRLGKKDQNSGCW  421
            PT   + P RT +KP+T GPQ+A+V GPAGQEIWTD+YGR+KVQF WDR GK D+NS+CW
Sbjct  449  PTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCW  508

Query  422  IRVATQWAGTGFGVVSIPRIGMEVIVDFLNGDPDYPIVTGCVYNAANMPPWALPANATQS  481
            IRV+  WAG GFG++ IPRIG EV+VDF NGDPD PI+ G  YN   MPPW+LP+ A+QS
Sbjct  509  IRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQS  568

Query  482  GIKTRSSKGGAPGAGMKNGQGDANAIRFEDKAGQEQLWLHAQKDQLTEVENDEDKWVGND  541
            GI ++S  GG+  + M         +RF+DK+G E++ +HA+KD  T V N+E   V  D
Sbjct  569  GIFSHSLYGGPTNGNM---------LRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVD  619

Query  542  RRKTVDRDETSVIHRDRTETVDRNEKIDV  570
            R KT+ ++ET+ I  DR  TV +N+ + V
Sbjct  620  RTKTIIKNETNSIGEDRNTTVTKNDGLSV  648


 Score = 29.8 bits (93),  Expect = 0.82, Method: Compositional matrix adjust.
 Identities = 15/64 (24%), Positives = 40/64 (63%), Gaps = 0/64 (0%)

Query  671  SDSVGMDWSRTVGRNRSAQIGNDEGLVVGHNRSSTIQNNDSTEVGQDQAVNVGNDHALRV  730
            +++V +D+++T+ +N +  IG+D    V  N + +++  ++ ++G    ++VG++ +LR 
Sbjct  613  THTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRC  672

Query  731  GANS  734
            G  +
Sbjct  673  GNAA  676

97) TKWG_21505 in NC_017964


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  329 bits (1235),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 216/537 (41%), Positives = 341/537 (64%), Gaps = 25/537 (4%)

Query  26   AQFLFDAMQGADGLSTLSDYTVRL----------LHRSMQVDVRALLGKSLTLTIE-TAA  74
            + +LF +++G++ LS L  Y V+L          +  + ++ +++++GK L + IE  ++
Sbjct  110  GALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGG  169

Query  75   APRHINGVIASFALVGQEGEADRYFVYEARVVPWFWLATHKKEFRIYQNQSVPETIKQVL  134
            + RHI+G++++  +VG+EG   R   YE R+ PW  L TH  +++ +QN++V + + +VL
Sbjct  170  GKRHISGLVTAARVVGHEG---RSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVL  226

Query  135  APYGYAFEFDLVESYTPRVYCVQYDETDFQFVSRLLEAEGIHYYFRHEQGKHTLVMSDEI  194
            A Y Y+ E  LVESY  R   VQY+ETDF+F+ RL++  GI   F H ++ HTLV++D I
Sbjct  227  AEYPYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI  286

Query  195  QSHKPVDGYEHVPYFTEDKLTLPQQDYMTHVAVFQDLRPGQYTTNDYNFTTPRADLAARQ  254
             +HK+  +   V    ++ L L +++++  ++  + LR GQ   +D++FT PR+ LA   
Sbjct  287  SAHKACPDSPLVE-WHQEGLKL-DKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTV  344

Query  255  QIKLDHSHNEAEVYEWPGNYGDDPLGERYARQRMQEQHHVRDTRTLRSTA-RGVATASLF  313
                + +H   E YEWPG+Y D + GE  +R RM+ Q+   ++R L +   R + T+  F
Sbjct  345  ANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRS-PGSRVLGGGNIRTLMTGYTF  403

Query  314  NLVRCPRTEENREYVVLGTRYDLKENNYHSVSSPEEAAQNGRRCVFDLTVQCATLPFRPP  373
             L   P +E N+EY+++ T   +++N  HS  + ++    + R  F+L  + +   FRP 
Sbjct  404  TLENYPTAEVNQEYLLMQTLLFVQDNAQHS--GQDQHFTFSTR--FEL--HPTREVFRPQ  457

Query  374  RITRKPRTLGPQTAVVVGPEGKEIWTNEYGQVKVHFHWDRYDKKDENSSCWIRVSSSWAS  433
            R   KP+T GPQ+A+V GP G+EIWT++YG+VKV+F WDRY+K DENSSCWIRVS +WA+
Sbjct  458  RTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAG  517

Query  434  GNFGAIQVPRIGDEVIVDFLNGDPDAPIITGRVYNAAMMPPWKLPENETQMGIYSRSTPD  493
              FG IQ+PRIG+EV+VDF NGDPD PII GR YN   MPPW LP   +Q GI+S+S  +
Sbjct  518  KGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYG  577

Query  494  GNYQTANAIRFEDKAGQEQLWIHAERNQDIEVERDETHWVGRDRKKNVDRHEHSFIG  550
            G    +N +RF+DK+G E++ +HAE++ +  V  +ETH V  DR K + ++E + IG
Sbjct  578  GP-TNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIG  633

98) Aave_3783 in NC_008752


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  327 bits (1225),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 230/558 (42%), Positives = 357/558 (64%), Gaps = 30/558 (5%)

Query  15   ALQFRQLQGEEALSALSAFEIDL----------LSKDKGIDPKALLGLGATVSIETEGLG  64
            AL F  L+G E+LS L ++ ++L          +S    +  K+++G +  V+IE +G G
Sbjct  111  ALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGG  170

Query  65   RRYLDGIVTRFGMRGQDTSAQIAYRLTLQPWLWLATRRTDFRIFQEMDVPAIVSQVLSRY  124
            +R + G+VT   + G++  + ++Y L ++PW+ L T+ +D++ FQ+  V  I+ +VL+ Y
Sbjct  171  KRHISGLVTAARVVGHEGRS-VTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEY  229

Query  125  GRPFVLRLTRGYRSRPYTVQYHESDYQFVSRLCESEGIYWFVEHASGSHTVVFADDVVAS  184
              P   RL  +Y  R   VQY E+D++F+ RL +  GIYW  EH+ +SHT+V+AD + ++
Sbjct  230  PYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAI-SA  288

Query  185  HAPLPGGHVIPFHPPGKTAIADREHIFAWRMGQGVAPGRAYLDDYDFTKPRADLSEMRQS  244
            H + P++ ++  H  G     D+E I +    +++  G+  LDD+DFTKPR+ L++   +
Sbjct  289  HKACPDSPLVEWHQEGLKL--DKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVAN  346

Query  245  PPGHAHDAYERYEWPGGYTEYADGETYTRLHMEEGMAARERAHAELNKRSIAPGYTIVLE  304
            P   +H +YE+YEWPG+Y + ++GE  TR++ME   ++  R  +  N R++  GYT+ LE
Sbjct  347  PRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLE  406

Query  305  NYPRDDQNRQYLVTRVHYHLEENVqatqgtggagqtqagSVQKFSMEVHPTSVpyrpevt  364
            NYP  + N++YL+ +    +++N Q +        +      +F  E+HPT   +RP+ T
Sbjct  407  NYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFST-----RF--ELHPTREVFRPQRT  459

Query  365  tprprttgpqtAVVVGPPGEEIWTDQYGRVKVQFHWDRIGAMNENSSCWVRVSTSWAGPG  424
             ++P+T GPQ+A+V GP+G+EIWTDQYGRVKVQF WDR G M+ENSSCW+RVS +WAG G
Sbjct  460  VSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKG  519

Query  425  FGAVFTPRIGMEVIVDFLNGDPDYPIILGCVYNAANMPPWGLPGNATQSGIKTKSSKGGA  484
            FG +  PRIG EV+VDF NGDPD PII+G  YN   MPPWGLPG A+QSGI         
Sbjct  520  FGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI---------  570

Query  485  FGDGMKNGAGDANAIRFEDRKGAEQLWLHAQKDQLTEVENDEDKWVGNDRRKTIDRDETN  544
            F++++  G+ ++N +RF+D+ GAE++ +HA+KD  T V N+E   V  DR KTI ++ETN
Sbjct  571  FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETN  630

Query  545  VIHRDRTETVDRNEKITV  562
             I  DR  TV +N+ ++V
Sbjct  631  SIGEDRNTTVTKNDGLSV  648


 Score = 31.9 bits (101),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 17/67 (26%), Positives = 38/67 (57%), Gaps = 0/67 (0%)

Query  570  VDGDETITIHSNRKERVDHDETISIGDNRREDVGIDETISIGKNRSKTIGRNEKDKIGNN  629
            V  +ET T+  +R   +  +ET SIG++R   V  ++ +S+   ++  IG   +  +G++
Sbjct  608  VKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQ  667

Query  630  WSIKVGK  636
             +++ G+
Sbjct  668  FTLRCGN  674


 Score = 28.7 bits (89),  Expect = 1.7, Method: Compositional matrix adjust.
 Identities = 19/64 (30%), Positives = 36/64 (57%), Gaps = 0/64 (0%)

Query  605  DETISIGKNRSKTIGRNEKDKIGNNWSIKVGKMKTETIGIACMQNVGVGRMENVGVAYNL  664
            +ET ++  +R+KTI +NE + IG++++  V K    ++ +A   N+G     +VG  + L
Sbjct  611  NETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGDQFTL  670

Query  665  NVGA  668
              G 
Sbjct  671  RCGN  674

99) Mesci_6369 in NC_014918


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  299 bits (1119),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 231/569 (41%), Positives = 354/569 (63%), Gaps = 21/569 (3%)

Query  3    NERATVVRTPVGSELLTFTHLVGRDEISRCFAYTV----------GFVSTDSDIDPLK-M  51
             +  TV  ++V +  L F+ L G + +S  F+Y V          G+VS  +++ PLK M
Sbjct  97   AHNVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANL-PLKPM  155

Query  52   LGGPL--SIEAESDPKRWFSGIVSEFRLTRLEDRLAYYEAVIRPWLWFLGNTTDCRIFQN  109
            +G  L  +IE +++ KR +SG+V+  R+   E+R   YE  + PW+ +L +T+D + FQN
Sbjct  156  VGKDLCVNIELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQN  215

Query  110  KSVLDIVKDIFKKYGIAEFDLRLQGSYPPREYCVQYDEPDLDFVQRLLEHEGILYFFEHD  169
            K+V+DI+ +++  Y  +  + RL  SYP R   VQY+E D+DF+QRL+++ GI   FEH 
Sbjct  216  KTVVDILDEVLAEYPYPV-EKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHS  274

Query  170  DGKHTLVLADAMSKLKPAPGYEKVLYNFEGQGSRRDVEYITEWIPGSSVRPGAYAHTDYD  229
            ++ HTLVLADA+S  K+ P  +  L + + +G + D E+I    +  S+R G     D+D
Sbjct  275  EDSHTLVLADAISAHKACP--DSPLVEWHQEGLKLDKEFIHTITANESLRTGQWVLDDFD  332

Query  230  FTKPGADLMAKSAQPFSHKEAAGENYRQPGAHLETGRGDSLAAIRREEIQAVHQRIAAVG  289
            FTKP + L    A+P    +A+ E+Y  PG  ++ + G+ L+ IR E  ++   R+ + G
Sbjct  333  FTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGG  392

Query  290  TVRGLYSGCTFKLDSFPREDQNQEYLVVSAEYRLFDPGYRAHADVNSE-NFKVILGLAPT  348
             +R L +G TF L+++P  + NQEYL++ +   LF  +   H++ + +  F   + L PT
Sbjct  393  NIRTLMTGYTFTLENYPTAEVNQEYLLMQT--LLFVQDNAQHSGQDQHFTFSTRFELHPT  450

Query  349  ALpyrppritprpimrgpQTATVVGPSGEEIFTDKYARVKVQFHWDRLGKKDQNSSCFVR  408
               +RP R  ++P  +GPQ+A V GP+G+EI TD+Y+RVKVQF WDR GK D+NSSC +R
Sbjct  451  REVFRPQRTVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIR  510

Query  409  VSQTWAGSGWGFIQIPRIGQEVIVDFIEGDPDLPIITGRVYNASQMPPYGLPGSATQsgw  468
            VS  WAG G G IQIPRIGQEV+VDF +GDPDLPII GR YN   MPP GLPG A+QSG 
Sbjct  511  VSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGI  570

Query  469  ksdsskggggYNELM-FEDKAGSELVNFQAQKDHILLVKHDRTKLVQHDQSDRIDHDAKH  527
             S+S  GG    +++ F+DK+G+E V+F+A+KD    VK++ T  V  D++  I  +  +
Sbjct  571  FSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETN  630

Query  528  SVGHNLDEDVGNNKTVKIGVDQTTNIGSN  556
            S+G++ +  V +N  + + + QT NIG+ 
Sbjct  631  SIGEDRNTTVTKNDGLSVKLAQTINIGTT  659


 Score = 43.2 bits (144),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 23/81 (29%), Positives = 53/81 (66%), Gaps = 0/81 (0%)

Query  664  SIAKDQGSTVGGGRTASVGKDDSTSVAGAHSLSVGKDSAISVTGNGTIKIGKKLVIDAGD  723
            ++ +++  TV  +RT ++ K+++ S++  ++ +V K+ ++SV    TI+IG    +D GD
Sbjct  607  TVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDVGD  666

Query  724  EILITTGSAKIMMKKDGTIAI  744
            ++ +  G+A +++ KDG+I +
Sbjct  667  QFTLRCGNAALVLHKDGSIEF  687


 Score = 34.0 bits (109),  Expect = 0.044, Method: Compositional matrix adjust.
 Identities = 31/117 (27%), Positives = 70/117 (60%), Gaps = 6/117 (5%)

Query  630  SVTVGAAQDHSIGASDSWTIASDQSVSIGGGHTESIAKDQGSTVGGGRTASVGKDDSTSV  689
            + TV   + H++    + TI  +++ SIG ++  +++K++G +V  ++T ++G      V
Sbjct  605  NTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRLDV  664

Query  690  AGAHSLSVGKDSAISVTGNGTIKI-GKKLVIDAGDEI-LITTGSAKIMMKKDGTIAI  744
            ++  +L  G ++A+ +  +G+I + GK+L+++++D + LI  G   I M+ DG  A+
Sbjct  665  GDQFTLRCG-NAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKG---IDMNPDGGTAV  717

100) USDA257_c28440 in NC_018000


> NC_003198_P1|32|G29|16759279|NP_454896.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|26545..28734|STY0319|-|Rhs-family 
protein
Length=729

 Score =  298 bits (1116),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 227/563 (41%), Positives = 354/563 (63%), Gaps = 24/563 (4%)

Query  11   TPLDPAKLTFTHLLGYDEISRCFAFTV----------GFVSPDENVDPLK-LLGKPISVE  59
            +++ P+ L F+ L G + +S  F++ V          G+VSP  N+ PLK ++GK + V+
Sbjct  105  SAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANL-PLKPMVGKDLCVN  163

Query  60   GE-SGDPKRWFSGLVSDFRLIRIQEGLAYYEAEVRPWLWLLGNTTDCRIFQNMSVVEIAE  118
             E  G+ KR +SGLV+  R++  +     YE  + PW+ LL +T+D + FQN +VV+I +
Sbjct  164  IELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILD  223

Query  119  EIFSKYKPAKFEKRLQGSYEAREYCVQYDETDLDFVQRLFEHEGIMYFFEYGDGEHTLIL  178
            E+++ Y P   EKRL  SY  R   VQY+ETD+DF+QRL ++ GI   FE +++ HTL+L
Sbjct  224  EVLAEY-PYPVEKRLVESYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVL  282

Query  179  ADAMNRLKPAPGYATVKFRAEGEPIRRDQEYITEWVATSSVHPATYAHTDYDFTKPAADL  238
            ADA++  K+ P+ + V  + EG  ++ D+E+I    A  S++ +     D+DFTKP + L
Sbjct  283  ADAISAHKACPDSPLVEWHQEG--LKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLL  340

Query  239  MAQSAQPFAHSQSRGEYYRHPGAHLTVGRGDSVAVVRREEIQAAHKRIAAAGTVRGLASG  298
                A+P   +++  E Y  PG  +  + G+ ++ +R E  +++  R+ ++G +R L +G
Sbjct  341  ANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTG  400

Query  299  CTFKLEDFPRKDQNAEYLVLRADYRLFDPGYRPAAYADEE-TFRANLKVAPTSLTYrppr  357
             TF LE++P  + N EYL++++   LF  +    +  D++ TF + + + PT   +RP R
Sbjct  401  YTFTLENYPTAEVNQEYLLMQT--LLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQR  458

Query  358  itprpimrgpQTATVVGPKGEEIFTDKYARVKVQFHWDRLGKKDQNSSCFVRVSQTWAGA  417
              ++P  +GPQ+A V GP G+EI TD+Y+RVKVQF WDR GK D+NSSC +RVS  WAG 
Sbjct  459  TVSKPHTKGPQSAIVTGPAGQEIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGK  518

Query  418  GWGFIQIPRIGQEVIIDFLEGDPDRPIITGRVYNGKEMPPYELPGNATQSGLKTNS---S  474
            G G IQIPRIGQEV++DF +GDPD PII GR YN   MPP  LPG A+QSG+ ++S   +
Sbjct  519  GFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGG  578

Query  475  PGGGGWNELRFEDKAGSEEVYFQAQKDNNLLIKNDRSKLVQHDQSDRIDNNAKHSVGVNL  534
            P  G  N LRF+DK+G+EEV F+A+KD N  +KN+ +  V  D++  I +N  +S+G + 
Sbjct  579  PTNG--NMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDR  636

Query  535  DEDVGNNKTTKVGVDRTVDIGSN  557
            +  V +N    V + +T++IG+ 
Sbjct  637  NTTVTKNDGLSVKLAQTINIGTT  659


 Score = 44.5 bits (149),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 24/104 (24%), Positives = 61/104 (59%), Gaps = 2/104 (1%)

Query  653  DQSVQIGGGQTSEIGKGRSAKIGEDDATQIGGARSIKVAKSSLVEIGQDGGVNVGKKLVI  712
            D +  +   +T  +  +R+  I  +++  IG  R+  V+K+  + +     +N+G    +
Sbjct  603  DLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTYRL  662

Query  713  EAGEAITIKTGSAMIVMKKDGTITIEGKDISVNAKG--KFVGKA  754
            + G+ +T++ G+A +V+ KDG+I + GK++ +++ +  +++GK+
Sbjct  663  DVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKG  706


 Score = 30.3 bits (95),  Expect = 0.49, Method: Compositional matrix adjust.
 Identities = 24/128 (19%), Positives = 75/128 (59%), Gaps = 12/128 (9%)

Query  617  TVGASQTNTIGTNRSVSVGSSQSHDIGTSDSWEIGTDQSVQIGGGQTSEIGKGRSAKIGE  676
            TV  ++T+T+  +R+ ++  ++++ IG         D++  +   +   +  +++ +IG 
Sbjct  607  TVKNNETHTVMVDRTKTIIKNETNSIGE--------DRNTTVTKNDGLSVKLAQTINIGT  658

Query  677  DDATQIGGARSIKVAKSSLVEIGQDGGVN-VGKKLVIEAGEAITIKTGSAMIVMKKDGTI  735
                ++G+  +++ ++++LV + +DG+++  GK+L++++++ + +   +  I M+ DG  
Sbjct  659  TYRLDVGDQFTLRCGNAALV-LHKDGSIEFCGKQLMLHTSDVMQLIGKG--IDMNPDGGT  715

Query  736  TIEGKDIS  743
            ++ + DI+
Sbjct  716  AVTADDIA  723