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Homologs of BCAM0259 gene of NC_011001_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Smlt2450
( YP_001972232.1 )

transcriptional repressor protein

NC_010943
(Stenotrophomonas maltophilia K279a)

7e-17

2) EbC_39300
( YP_003743308.1 )

XRE family transcripitonal regulator

NC_014306
(Erwinia billingiae Eb661)

1e-15

3) ENC_44110
( YP_007847613.1 )

Helix-turn-helix.

NC_021046
(Enterobacter cloacae NCTC 9394)

3e-15

4) Dd586_3973
( YP_003335506.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

4e-15

5) Ser39006_0723
( YP_008521105.1 )

helix-turn-helix domain protein

NC_022268
(Serratia sp. ATCC 39006)

1e-14

6) R2APBS1_1684
( YP_007590049.1 )

putative transcription factor, MBF1 like protein

NC_020541
(Rhodanobacter sp. 2APBS1)

3e-14

7) PCA10_07110
( YP_008101048.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

5e-14

8) ES15_3405
( YP_006344489.1 )

transcriptional regulator

NC_017933
(Cronobacter sakazakii ES15)

7e-14

9) CTU_05290
( YP_003208892.1 )

hypothetical protein

NC_013282
(Cronobacter turicensis z3032)

7e-14

10) CSSP291_15905
( YP_007442039.1 )

transcriptional regulator

NC_020260
(Cronobacter sakazakii Sp291)

9e-14

11) XACM_3184
( YP_004852731.1 )

transcriptional regulator

NC_016010
(Xanthomonas axonopodis F1)

3e-05

• Sequence Alignments

1) BCAM0259 in NC_011001


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score =  150 bits (553),  Expect = 6e-38, Method: Compositional matrix adjust.
 Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)

Query  1    MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60
            MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH
Sbjct  1    MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61   RLARVLHVPTSFLYEGNDllarllvaaaplpQDSLEALLEYAERLSRTAAS  111
            RLARVLHVPTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSRTAAS
Sbjct  61   RLARVLHVPTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSRTAAS  111

2) Bcenmc03_4266 in NC_010515


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 109/111 (99%), Positives = 111/111 (100%), Gaps = 0/111 (0%)

Query  1    MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60
            MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH
Sbjct  1    MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61   RLAQVLHVPTSFLYESNDllarllvaaaplpQDSLEALLEYAERLSRTAAS  111
            RLA+VLHVPTSFLYE+NDLLARLLVAAAPLPQDSLEALLEYAERLSRTAAS
Sbjct  61   RLARVLHVPTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSRTAAS  111

3) Bphyt_0145 in NC_010681


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 72/106 (68%), Positives = 87/106 (83%), Gaps = 0/106 (0%)

Query  6    ATSSVFAKRLKEARVRSCLTQEQLGINAGIDEFSASARINQYERGKHLPHLGMGQRLARA  65
            +TSS+F+KRL+EAR+RS L+QEQLGI+AGIDEFSASAR+NQYE GKH P L  ++RLAR 
Sbjct  6    STSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAHRLARV  65

Query  66   LHVPTSFLYEEDDllaallvaaarlTRSRKKVLLANAETLSQSATS  111
            LHVPTSFLYE +DLLA LLVAAA L +     LL  AE LS++A+S
Sbjct  66   LHVPTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSRTAAS  111

4) Bxe_C0429 in NC_007953


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score =  100 bits (364),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 67/106 (64%), Positives = 90/106 (85%), Gaps = 0/106 (0%)

Query  3    RDTPTSDAVFPRRLKQARLRSGLTQEQLGIHAGIDEFSASARVNQYEKGKHTPAIQTSQR  62
            R T ++ ++FP+RL++ARLRSGL+QEQLGI+AGIDEFSASARVNQYE GKH+P +QT++R
Sbjct  2    RRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAHR  61

Query  63   LARALLVPTGFLYEdddllanllaiaGRLSKEKKRALLASAEKLAQ  108
            LAR L VPT+FLYE++DLLA LL  A+ L+++   ALL  AE+L++
Sbjct  62   LARVLHVPTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSR  107

5) Bphyt_0144 in NC_010681


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 65/106 (62%), Positives = 89/106 (84%), Gaps = 0/106 (0%)

Query  3    RDTTTSDAVFPRRLKQARQRSGLTQEQLGIQAGIDEFSASTRVNQYEKGKHTPAIQTSQR  62
            R T ++ ++FP+RL++AR RSGL+QEQLGI+AGIDEFSAS+RVNQYE GKH+P +QT++R
Sbjct  2    RRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAHR  61

Query  63   LARALLVPTGFLYEdddllasllaiaGRLSKEKKRALLASAEKLAQ  108
            LAR L VPT+FLYE++DLLA LL  A+ L+++   ALL  AE+L++
Sbjct  62   LARVLHVPTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSR  107

6) Bxe_C0430 in NC_007953


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 69/106 (66%), Positives = 86/106 (82%), Gaps = 0/106 (0%)

Query  6    TTSSIFAKRLKEARVRARLTQEQLGINAGIDEFSASARINQYERGKHLPHLLMGQRLARA  65
            +TSSIF+KRL+EAR+R+ L+QEQLGI+AGIDEFSASAR+NQYE GKH P L  ++RLAR 
Sbjct  6    STSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAHRLARV  65

Query  66   LHVPTSFLYEEddlladllivaarlTRGKKKILLANAEALRQSASS  111
            LHVPTSFLYE +DLLA LL+ AA L ++    LL  AE L ++A+S
Sbjct  66   LHVPTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSRTAAS  111

7) Smlt2450 in NC_010943


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 80.7 bits (287),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 62/78 (80%), Gaps = 0/78 (0%)

Query  1   MTLSVDSTPTFARRLKQARLHTGLSQKELGIRAGLDPHVASPRINQYERGKHEPMLEIAE  60
           M  ++ +++ F++RL++ARL++GLSQ +LGI AG+D   AS+R+NQYE GKH P L+ A+
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  RLAQALGIPAAFLYTDDD  78
           RLA+ L +P++FLY ++D
Sbjct  61  RLARVLHVPTSFLYEGND  78

8) EbC_39300 in NC_014306


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 76.5 bits (271),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 54/78 (70%), Gaps = 0/78 (0%)

Query  1   MKPRSSIHETFCKRLKQARLAKGFSQKSLGIAAGIDEFVASTRINRYEKGIHEADLDTVQ  60
           M+   S    F KRL++ARL  G+SQ  LGI AGIDEF AS+R+N+YE G H + L+T +
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  RLAEALEVPVAYLFAEDD  78
           RLA  L+VP ++L+  +D
Sbjct  61  RLARVLHVPTSFLYEGND  78

9) ENC_44110 in NC_021046


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 75.0 bits (265),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 36/78 (47%), Positives = 59/78 (76%), Gaps = 0/78 (0%)

Query  1   MKTSNPHNQLFSRRLKEVRLDMALSQKSLGILAGIDEFAASARINRYEKGVHQASIEVVR  60
           M+ + + + +F++RL+E RL  +LSQ  LGI AGIDEF+ASAR+N+YE G H + ++  +
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  HLAKVLEVPVAYFYTEDD  78
           +LA+VL+VP +++Y  +D
Sbjct  61  RLARVLHVPTSFLYEGND  78

10) Dd586_3973 in NC_013592


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 37/78 (48%), Positives = 58/78 (75%), Gaps = 0/78 (0%)

Query  1   MKAKQNYHDVFCQRLKQARLAKGLSQKKLGIAAGIDEFVASTRINRYEKGVHEASIDTAQ  60
           M+   +   +F +RL++ARL  GLSQ +LGI AGIDEF AS+R+N+YE G H + ++TA+
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  QLSDALDVPLAFFYTADD  78
           +L+  L+VP +F+Y ++D
Sbjct  61  RLARVLHVPTSFLYEGND  78

11) Ser39006_0723 in NC_022268


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 38/78 (49%), Positives = 58/78 (75%), Gaps = 0/78 (0%)

Query  1   MKPKPNYHDIFCQRLKQARNTKGLSQKQLGIDAGIDEFVASTRINRYERGIHQANIETIQ  60
           M+   +   IF +RL++AR   GLSQ QLGI+AGIDEF AS+R+N+YE G H ++++T +
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  LLAEVLQVPLAYFYTADD  78
            LA VL+VP +++Y ++D
Sbjct  61  RLARVLHVPTSFLYEGND  78

12) R2APBS1_1684 in NC_020541


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 71.8 bits (253),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 41/78 (53%), Positives = 56/78 (72%), Gaps = 0/78 (0%)

Query  1   MPRPREPSSIFSKRLKQARQDAGLSQKELGILAGLDPFVASTRINRYEQDVHATDQATAK  60
           M R    SSIF+KRL++AR  +GLSQ +LGI AG+D F AS+R+N+YE + HA    TA 
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  RLAKALGVPLAYLYADNE  78
           RLA+ L VP ++LY +N+
Sbjct  61  RLARVLHVPTSFLYEGND  78

13) PCA10_07110 in NC_021499


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 71.0 bits (250),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 44/103 (43%), Positives = 74/103 (72%), Gaps = 0/103 (0%)

Query  2    SVFARRLKEARKAAGLSQESLGIRAEIDPMSASARMNQYEKGKHEPNIVVVRQIAAALDL  61
            S+F++RL+EAR  +GLSQE LGI A ID  SASAR+NQYE GKH P++   +++A  L++
Sbjct  9    SIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAHRLARVLHV  68

Query  62   PEAYFYAADDDMAELLRLFHKLSREKRDEVLEFAMKLGGVGPA  104
            P +++Y ++D +A LL     L+++  + +LE+A +L+  +++
Sbjct  69   PTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSRTAAS  111

14) ES15_3405 in NC_017933


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 70.8 bits (249),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 56/78 (72%), Gaps = 0/78 (0%)

Query  1   MSETTNTPTVFCKRLKTAREAKGLSQKKLGILAGIDEFVASARINRYEKGVHQASIEIAR  60
           M  T +T+++F KRL+ AR   GLSQ +LGI AGIDEF ASAR+N+YE G H + ++ A+
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  KLADALAVPLAYFYTEDD  78
           +LA  L VP +++Y  +D
Sbjct  61  RLARVLHVPTSFLYEGND  78

15) CTU_05290 in NC_013282


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 70.8 bits (249),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 56/78 (72%), Gaps = 0/78 (0%)

Query  1   MSETTNTPTVFCKRLKTAREAKGLSQKKLGILAGIDEFVASARINRYEKGVHQASIEIAR  60
           M  T +T+++F KRL+ AR   GLSQ +LGI AGIDEF ASAR+N+YE G H + ++ A+
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  KLADALAVPLAYFYTEDD  78
           +LA  L VP +++Y  +D
Sbjct  61  RLARVLHVPTSFLYEGND  78

16) bgla_1g14380 in NC_015381


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 70.5 bits (248),  Expect = 8e-14, Method: Compositional matrix adjust.
 Identities = 44/99 (45%), Positives = 71/99 (72%), Gaps = 0/99 (0%)

Query  2    SVLALRLKDARQRAGLSQERLGIEAGLDPMSASTRMNRYELGKRVPDVELVTRLAVVLKV  61
            S+++ RL++AR R+GLSQE+LGIEAG+D  SAS+R+N+YE GK+ P ++   RLA VL V
Sbjct  9    SIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAHRLARVLHV  68

Query  62   PAAYFYAVDDVEAEMLLKFHGLTKSQQQSVLSFMSELSR  100
            P++++Y  +D+ A +L+    L +   +++L +   LSR
Sbjct  69   PTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSR  107

17) CSSP291_15905 in NC_020260


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 70.2 bits (247),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 55/78 (71%), Gaps = 0/78 (0%)

Query  1   MSETTNTPTVFCKRLKTAREAKGLSQKKLGILAGIDEFVASARINRYEKGVHQASIEIAC  60
           M  T +T+++F KRL+ AR   GLSQ +LGI AGIDEF ASAR+N+YE G H + ++ A 
Sbjct  1   MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61  KLADALAVPLAYFYTEDD  78
           +LA  L VP +++Y  +D
Sbjct  61  RLARVLHVPTSFLYEGND  78

18) N175_01610 in NC_022223


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 41/98 (42%), Positives = 65/98 (67%), Gaps = 0/98 (0%)

Query  7    IPIRLKEARKKAKLSQKMLGVRIGMDESSASPRMNQYEKGKHTPDVHTLKLIADELGVPL  66
            +P RL+EAR ++ LSQ  LG+  G+DE SAS+R+NQYE GKH+P ++T   +A  L VP 
Sbjct  11   FPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAHRLARVLHVPT  70

Query  67   NYFFCEDDVSAELAILINQLSKKERKALLESIQKLSPS  104
            ++++  +D+ A L +    L++    ALLE  ++LS +
Sbjct  71   SFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSRT  108

19) VAA_00604 in NC_015633


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 41/98 (42%), Positives = 65/98 (67%), Gaps = 0/98 (0%)

Query  7    IPIRLKEARKKAKLSQKMLGVRIGMDESSASPRMNQYEKGKHTPDVHTLKLIADELGVPL  66
            +P RL+EAR ++ LSQ  LG+  G+DE SAS+R+NQYE GKH+P ++T   +A  L VP 
Sbjct  11   FPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAHRLARVLHVPT  70

Query  67   NYFFCEDDVSAELAILINQLSKKERKALLESIQKLSPS  104
            ++++  +D+ A L +    L++    ALLE  ++LS +
Sbjct  71   SFLYEGNDLLARLLVAAAPLPQDSLEALLEYAERLSRT  108

20) XACM_3184 in NC_016010


> NC_011001_R1|32|G26|206562126|YP_002232889.1|Burkholderia_cenocepacia_J2315|-|23094..23429|-|BCAM0259|putative 
repressor 
protein
Length=111

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 42/104 (41%), Positives = 71/104 (69%), Gaps = 0/104 (0%)

Query  1    MPASLPTSSVFgrrlraarrvaglSQVELGALLGMNEKAASSRLSRYERGEREPDHETLA  60
            M  +L+TSS+F +RLR AR  +GLSQ +LG   G++E +AS+R+++YE G + P  +T  
Sbjct  1    MRRTLSTSSIFPKRLREARLRSGLSQEQLGIEAGIDEFSASARVNQYETGKHAPKLQTAH  60

Query  61   ALSDVLGVPEAYFHAGSDVLAEVILLVARLPEERQQAVLDLVKR  104
             L+ VL VP +++  G+D+LA +++  A LP++  +A+L+   R
Sbjct  61   RLARVLHVPTSFLYEGNDLLARLLVAAAPLPQDSLEALLEYAER  104