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Homologs of cap1L gene of U10927

412

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) capL
( YP_002635436.1 )

capsular polysaccharide biosynthesis protein CapL

NC_012121
(Staphylococcus carnosus TM300)

6e-161

2) capL
( YP_002560078.1 )

capsular polysaccharide biosynthesis protein CapL

NC_011999
(Macrococcus caseolyticus JCSC5402)

2e-150

3) GWCH70_3259
( YP_002951168.1 )

nucleotide sugar dehydrogenase

NC_012793
(Geobacillus sp. WCH70)

7e-131

4) GM18_1428
( YP_004198172.1 )

nucleotide sugar dehydrogenase

NC_014973
(Geobacter sp. M18)

2e-130

5) GM18_1431
( YP_004198175.1 )

nucleotide sugar dehydrogenase

NC_014973
(Geobacter sp. M18)

9e-130

6) SYN_01113
( YP_460462.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_007759
(Syntrophus aciditrophicus SB)

1e-129

7) Sde_0619
( YP_526093.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007912
(Saccharophagus degradans 2-40)

2e-127

8) Ppro_2441
( YP_902104.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008609
(Pelobacter propionicus DSM 2379)

2e-126

9) capL
( YP_006720957.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_007517
(Geobacter metallireducens GS-15)

4e-125

10) Exig_2569
( YP_001815035.1 )

nucleotide sugar dehydrogenase

NC_010556
(Exiguobacterium sibiricum 255-15)

1e-124

11) Eab7_2409
( YP_006792111.1 )

nucleotide sugar dehydrogenase

NC_018665
(Exiguobacterium antarcticum Eab7)

1e-123

12) capL
( YP_006890934.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_017454
(Geobacter sulfurreducens KN400)

8e-124

13) capL
( NP_952991.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_002939
(Geobacter sulfurreducens PCA)

8e-124

14) Hneap_0232
( YP_003262142.1 )

nucleotide sugar dehydrogenase

NC_013422
(Halothiobacillus neapolitanus c2)

2e-122

15) NIDE2831
( YP_003798461.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_014355
(Candidatus Nitrospira defluvii )

3e-122

16) CbuK_0713
( YP_002305114.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_011528
(Coxiella burnetii CbuK_Q154)

2e-119

17) CBUD_0910
( YP_001424293.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_009727
(Coxiella burnetii Dugway 5J108-111)

2e-119

18) COXBURSA331_A1105
( YP_001596859.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_010117
(Coxiella burnetii RSA 331)

2e-119

19) CBU_0845
( NP_819865.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_002971
(Coxiella burnetii RSA 493)

2e-119

20) CbuG_1156
( YP_002303635.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_011527
(Coxiella burnetii CbuG_Q212)

3e-119

21) BMS_0344
( YP_005034238.1 )

UDP-glucose/GDP mannose dehydrogenase

NC_016620
(Bacteriovorax marinus SJ)

4e-119

22) NH8B_3694
( YP_004848856.1 )

nucleotide sugar dehydrogenase

NC_016002
(Pseudogulbenkiania sp. NH8B)

5e-118

23) GM18_1618
( YP_004198360.1 )

nucleotide sugar dehydrogenase

NC_014973
(Geobacter sp. M18)

5e-118

24) gna
( YP_003043165.1 )

udp-n-acetyl-d-galactosamine dehydrogenase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

7e-118

25) Ddes_1910
( YP_002480484.1 )

nucleotide sugar dehydrogenase

NC_011883
(Desulfovibrio desulfuricans ATCC 27774)

1e-116

26) wbpO
( YP_692628.1 )

capsular polysaccharide biosynthesis protein/UDP-glucose dehydrogenase/GDP mannose family protein, putati

NC_008260
(Alcanivorax borkumensis SK2)

8e-117

27) MmarC5_1312
( YP_001097824.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009135
(Methanococcus maripaludis C5)

1e-116

28) capL-1
( YP_002138566.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_011146
(Geobacter bemidjiensis Bem)

2e-116

29) Dbac_3008
( YP_003159499.1 )

nucleotide sugar dehydrogenase

NC_013173
(Desulfomicrobium baculatum DSM 4028)

3e-116

30) GM21_2494
( YP_003022294.1 )

nucleotide sugar dehydrogenase

NC_012918
(Geobacter sp. M21)

9e-116

31) HP15_p187g68
( YP_005887940.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_017507
(Marinobacter adhaerens HP15)

1e-115

32) Despr_1361
( YP_004194815.1 )

nucleotide sugar dehydrogenase

NC_014972
(Desulfobulbus propionicus DSM 2032)

1e-115

33) TKWG_20445
( YP_006380820.1 )

polysaccharide biosynthesis protein

NC_017964
(Advenella kashmirensis WT001)

2e-115

34) Psyc_0650
( YP_263943.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007204
(Psychrobacter arcticus 273-4)

2e-115

35) RTCIAT899_CH18215
( YP_007335551.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_020059
(Rhizobium tropici CIAT 899)

2e-115

36) wecC
( YP_088693.1 )

WecC protein

NC_006300
(Mannheimia succiniciproducens MBEL55E)

3e-115

37) CAP2UW1_3279
( YP_003168473.1 )

nucleotide sugar dehydrogenase

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

3e-115

38) Cri9333_3497
( YP_007143832.1 )

nucleotide sugar dehydrogenase

NC_019753
(Crinalium epipsammum PCC 9333)

4e-115

39) Nmul_A0270
( YP_410970.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007614
(Nitrosospira multiformis ATCC 25196)

5e-115

40) SYO3AOP1_1757
( YP_001931908.1 )

nucleotide sugar dehydrogenase

NC_010730
(Sulfurihydrogenibium sp. YO3AOP1)

1e-114

41) GM21_2445
( YP_003022246.1 )

nucleotide sugar dehydrogenase

NC_012918
(Geobacter sp. M21)

1e-114

42) azo3189
( YP_934692.1 )

NDPsugar dehydrogenase

NC_008702
(Azoarcus sp. BH72)

2e-114

43) AB57_0094
( YP_002317508.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_011586
(Acinetobacter baumannii AB0057)

5e-114

44) M3Q_284
( YP_006846611.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_018706
(Acinetobacter baumannii TYTH-1)

1e-113

45) capL-2
( YP_002138617.1 )

UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_011146
(Geobacter bemidjiensis Bem)

6e-114

46) ABBFA_003458
( YP_002327330.1 )

protein capL

NC_011595
(Acinetobacter baumannii AB307-0294)

6e-114

47) ABAYE3815
( YP_001715532.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_010410
(Acinetobacter baumannii AYE)

6e-114

48) Tmz1t_1116
( YP_002354771.1 )

nucleotide sugar dehydrogenase

NC_011662
(Thauera sp. MZ1T)

7e-114

49) wbgT
( YP_313477.1 )

putative UDP-glucose 6-dehydrogenase

NC_007385
(Shigella sonnei Ss046)

8e-114

50) vipA
( YP_004997239.1 )

putative UDP-glucose/GDP-mannose dehydrogenase

NC_016603
(Acinetobacter calcoaceticus PHEA-2)

2e-113

51) Ftrac_2667
( YP_004054753.1 )

nucleotide sugar dehydrogenase

NC_014759
(Marivirga tractuosa DSM 4126)

2e-113

52) Hoch_5211
( YP_003269590.1 )

nucleotide sugar dehydrogenase

NC_013440
(Haliangium ochraceum DSM 14365)

2e-113

53) wbpO
( YP_007893942.1 )

polysaccharide biosynthesis protein

NC_021149
(Azotobacter vinelandii CA)

2e-113

54) wbpO
( YP_007898991.1 )

polysaccharide biosynthesis protein

NC_021150
(Azotobacter vinelandii CA6)

2e-113

55) wbpO
( YP_002800132.1 )

polysaccharide biosynthesis protein

NC_012560
(Azotobacter vinelandii DJ)

2e-113

56) Sulba_1881
( YP_006404736.1 )

nucleotide sugar dehydrogenase

NC_018002
(Sulfurospirillum barnesii SES-3)

3e-113

57) Arnit_2571
( YP_003656726.1 )

nucleotide sugar dehydrogenase

NC_014166
(Arcobacter nitrofigilis DSM 7299)

3e-113

58) ELI_2699
( YP_003960643.2 )

UDP-glucose/GDP-mannose dehydrogenase

NC_014624
(Eubacterium limosum KIST612)

3e-113

59) Bpro_3997
( YP_550789.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007948
(Polaromonas sp. JS666)

3e-113

60) ELI_2407
( YP_003960352.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_014624
(Eubacterium limosum KIST612)

4e-113

61) AOLE_19135
( YP_003734082.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_014259
(Acinetobacter oleivorans DR1)

5e-113

62) capL
( YP_007324536.1 )

Protein CapL

NC_020055
(Desulfovibrio hydrothermalis DSM 14728)

1e-112

63) SULAZ_0339
( YP_002728333.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_012438
(Sulfurihydrogenibium azorense Az-Fu1)

5e-113

64) Calni_0837
( YP_004050911.1 )

nucleotide sugar dehydrogenase

NC_014758
(Calditerrivibrio nitroreducens DSM 19672)

6e-113

65) PsycPRwf_0249
( YP_001279154.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009524
(Psychrobacter sp. PRwf-1)

6e-113

66) Abu_0661
( YP_001489595.1 )

UDP-hexose dehydrogenase

NC_009850
(Arcobacter butzleri RM4018)

8e-113

67) wbpO
( YP_005430418.1 )

UDP-glucose dehydrogenase

NC_017067
(Marinobacter hydrocarbonoclasticus ATCC 49840)

9e-113

68) ugd
( YP_007594604.1 )

UDP-glucose 6-dehydrogenase

NC_020547
(Acinetobacter baumannii D1279779)

9e-113

69) ABTJ_03761
( YP_006291604.1 )

nucleotide sugar dehydrogenase

NC_017847
(Acinetobacter baumannii MDR-TJ)

9e-113

70) wbpA
( NP_718746.1 )

UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA

NC_004347
(Shewanella oneidensis MR-1)

1e-112

71) wbpO
( YP_006966809.1 )

capsular polysaccharide biosynthesis protein

NC_019382
(Bordetella bronchiseptica 253)

1e-112

72) wbpO
( YP_006626409.1 )

capsular polysaccharide biosynthesis protein

NC_018518
(Bordetella pertussis 18323)

1e-112

73) wbpO
( YP_005589753.1 )

capsular polysaccharide biosynthesis protein

NC_017223
(Bordetella pertussis CS)

1e-112

74) wbpO
( NP_880357.1 )

capsular polysaccharide biosynthesis protein

NC_002929
(Bordetella pertussis Tohama I)

1e-112

75) Maqu_2609
( YP_959871.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008740
(Marinobacter aquaeolei VT8)

1e-112

76) ACICU_00074
( YP_001844733.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_010611
(Acinetobacter baumannii ACICU)

1e-112

77) ACIAD0087
( YP_044888.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_005966
(Acinetobacter sp. ADP1)

1e-112

78) Varpa_4689
( YP_004156963.1 )

nucleotide sugar dehydrogenase

NC_014931
(Variovorax paradoxus EPS)

1e-112

79) Swoo_1654
( YP_001760035.1 )

nucleotide sugar dehydrogenase

NC_010506
(Shewanella woodyi ATCC 51908)

2e-112

80) SCD_n01334
( YP_008546193.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_022357
(Sulfuricella denitrificans skB26)

2e-112

81) wbpO
( YP_006627323.1 )

polysaccharide biosynthesis protein

NC_018518
(Bordetella pertussis 18323)

2e-112

82) wbpO
( YP_005591113.1 )

polysaccharide biosynthesis protein

NC_017223
(Bordetella pertussis CS)

2e-112

83) wbpO
( NP_881715.1 )

polysaccharide biosynthesis protein

NC_002929
(Bordetella pertussis Tohama I)

2e-112

84) BJAB07104_00090
( YP_008207556.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_021726
(Acinetobacter baumannii BJAB07104)

2e-112

85) swp_1575
( YP_002310945.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_011566
(Shewanella piezotolerans WP3)

2e-112

86) wbpO
( NP_883123.1 )

polysaccharide biosynthesis protein

NC_002928
(Bordetella parapertussis 12822)

3e-112

87) wbpO
( NP_885147.1 )

capsular polysaccharide biosynthesis protein

NC_002928
(Bordetella parapertussis 12822)

3e-112

88) BJAB0715_00093
( YP_008215241.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_021733
(Acinetobacter baumannii BJAB0715)

3e-112

89) ABZJ_00077
( YP_005524033.1 )

putative UDP-glucose/GDP-mannose dehydrogenase

NC_017171
(Acinetobacter baumannii MDR-ZJ06)

3e-112

90) BJAB0868_00092
( YP_008211419.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_021729
(Acinetobacter baumannii BJAB0868)

4e-112

91) ABSDF0066
( YP_001705819.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_010400
(Acinetobacter baumannii SDF)

4e-112

92) ABTW07_0082
( YP_005796971.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

4e-112

93) wbpO
( NP_889461.1 )

capsular polysaccharide biosynthesis protein

NC_002927
(Bordetella bronchiseptica RB50)

4e-112

94) DvMF_2494
( YP_002436902.1 )

nucleotide sugar dehydrogenase

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

4e-112

95) ABK1_0085
( YP_005512657.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_017162
(Acinetobacter baumannii 1656-2)

4e-112

96) wbpO
( YP_001632646.1 )

polysaccharide biosynthesis protein

NC_010170
(Bordetella petrii DSM 12804)

5e-112

97) wbpO
( YP_006899090.1 )

polysaccharide biosynthesis protein

NC_018829
(Bordetella bronchiseptica MO149)

5e-112

98) wbpO
( YP_006894840.1 )

polysaccharide biosynthesis protein

NC_018828
(Bordetella parapertussis Bpp5)

5e-112

99) wbpO
( YP_006896513.1 )

capsular polysaccharide biosynthesis protein

NC_018828
(Bordetella parapertussis Bpp5)

5e-112

100) ZPR_2257
( YP_003584777.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_014041
(Zunongwangia profunda SMA-87)

5e-112

101) Mmc1_1493
( YP_865408.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008576
(Magnetococcus marinus MC-1)

5e-112

102) wbpO
( YP_006900456.1 )

capsular polysaccharide biosynthesis protein

NC_018829
(Bordetella bronchiseptica MO149)

6e-112

103) wbpO
( NP_887425.1 )

polysaccharide biosynthesis protein

NC_002927
(Bordetella bronchiseptica RB50)

7e-112

104) REMIM1_CH00772
( YP_008363551.1 )

Vi polysaccharide biosynthesis TviB protein

NC_021905
(Rhizobium etli Mim1)

7e-112

105) NH44784_029471
( YP_008030030.1 )

UDP-glucose dehydrogenase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

2e-111

106) CCC13826_0461
( YP_001467302.1 )

nucleotide sugar dehydrogenase subfamily protein

NC_009802
(Campylobacter concisus 13826)

2e-111

107) vipA
( YP_003981630.1 )

Vi polysaccharide biosynthesis protein VipA/TviB

NC_014640
(Achromobacter xylosoxidans A8)

2e-111

108) CE0381
( NP_736991.1 )

lipopolysaccharide biosynthesis protein

NC_004369
(Corynebacterium efficiens YS-314)

2e-111

109) wecC
( YP_005435262.1 )

UDP-N-acetyl-D-mannosamine dehydrogenase WecC

NC_017075
(Rubrivivax gelatinosus IL144)

2e-111

110) Sulku_2379
( YP_004061239.1 )

nucleotide sugar dehydrogenase

NC_014762
(Sulfuricurvum kujiense DSM 16994)

2e-111

111) CPS_3644
( YP_270312.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_003910
(Colwellia psychrerythraea 34H)

3e-111

112) wecC
( YP_003776140.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_014323
(Herbaspirillum seropedicae SmR1)

3e-111

113) PT7_2139
( YP_004417303.1 )

polysaccharide biosynthesis protein

NC_015458
(Pusillimonas sp. T7-7)

3e-111

114) BBta_5622
( YP_001241486.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_009485
(Bradyrhizobium sp. BTAi1)

3e-111

115) wbtE
( YP_899048.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008601
(Francisella novicida U112)

3e-111

116) Fjoh_0356
( YP_001192711.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009441
(Flavobacterium johnsoniae UW101)

4e-111

117) wbpO
( YP_785044.1 )

polysaccharide biosynthesis protein

NC_010645
(Bordetella avium 197N)

1e-110

118) DP0593
( YP_064329.1 )

polysaccharide biosynthesis protein vipA/tviB

NC_006138
(Desulfotalea psychrophila LSv54)

1e-110

119) PSYCG_03395
( YP_008162556.1 )

Vi polysaccharide biosynthesis protein vipA/tviB

NC_021661
(Psychrobacter sp. G)

6e-111

120) Asuc_0111
( YP_001343426.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009655
(Actinobacillus succinogenes 130Z)

7e-111

121) TK90_2543
( YP_003461768.1 )

nucleotide sugar dehydrogenase

NC_013889
(Thioalkalivibrio sp. K90mix)

8e-111

122) P700755_003407
( YP_006868793.1 )

UDP-N-acetyl-D-galactosamine dehydrogenase, putative

NC_018721
(Psychroflexus torquis ATCC 700755)

1e-110

123) wbtE
( YP_667529.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008245
(Francisella tularensis FSC 198)

1e-110

124) NE061598_08155
( YP_005831582.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_017453
(Francisella tularensis NE061598)

1e-110

125) wbtE
( YP_170397.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_006570
(Francisella tularensis SCHU S4)

1e-110

126) wbtE
( YP_005318521.1 )

UDP-glucose dehydrogenase

NC_016937
(Francisella tularensis TI0902)

1e-110

127) wbtE
( YP_005306067.1 )

UDP-glucose dehydrogenase

NC_016933
(Francisella tularensis TIGB03)

1e-110

128) CCV52592_1221
( YP_001407699.1 )

nucleotide sugar dehydrogenase subfamily protein

NC_009715
(Campylobacter curvus 525.92)

2e-110

129) NIS_0283
( YP_001355754.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009662
(Nitratiruptor sp. SB155-2)

2e-110

130) wbtE
( YP_001892095.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_010677
(Francisella tularensis FSC147)

2e-110

131) wbtE
( YP_001121464.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009257
(Francisella tularensis WY96-3418)

2e-110

132) DGI_1401
( YP_008590417.1 )

hypothetical protein

NC_022444
(Desulfovibrio gigas ATCC 19364)

3e-110

133) BRADO5154
( YP_001207065.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009445
(Bradyrhizobium sp. ORS278)

3e-110

134) Aave_0949
( YP_969321.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008752
(Acidovorax citrulli AAC00-1)

4e-110

135) TK90_1550
( YP_003460787.1 )

nucleotide sugar dehydrogenase

NC_013889
(Thioalkalivibrio sp. K90mix)

4e-110

136) DSC_06815
( YP_004930055.1 )

nucleotide sugar dehydrogenase

NC_016147
(Pseudoxanthomonas spadix BD-a59)

4e-110

137) UWK_01813
( YP_007468024.1 )

nucleotide sugar dehydrogenase

NC_020304
(Desulfocapsa sulfexigens DSM 10523)

1e-109

138) Clo1100_2991
( YP_005148947.1 )

nucleotide sugar dehydrogenase

NC_016791
(Clostridium sp. BNL1100)

5e-110

139) Intca_2644
( YP_004099876.1 )

nucleotide sugar dehydrogenase

NC_014830
(Intrasporangium calvum DSM 43043)

7e-110

140) Thivi_2178
( YP_006414253.1 )

nucleotide sugar dehydrogenase

NC_018012
(Thiocystis violascens DSM 198)

7e-110

141) Alide2_0711
( YP_004386643.1 )

nucleotide sugar dehydrogenase

NC_015422
(Alicycliphilus denitrificans K601)

8e-110

142) F92_03250
( YP_007008758.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_019537
(Francisella tularensis F92)

1e-109

143) wbtE
( YP_007011585.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_019551
(Francisella tularensis FSC200)

1e-109

144) wbtE
( YP_001428062.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009749
(Francisella tularensis FTNF002-00)

1e-109

145) FTL_0596
( YP_513356.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007880
(Francisella tularensis LVS)

1e-109

146) wecC
( YP_763197.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008369
(Francisella tularensis OSU18)

1e-109

147) DP0047
( YP_063783.1 )

lipopolysaccharide biosynthesis protein (WbpO)

NC_006138
(Desulfotalea psychrophila LSv54)

2e-109

148) Rfer_0667
( YP_521949.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007908
(Rhodoferax ferrireducens T118)

2e-109

149) Fleli_1211
( YP_006433441.1 )

nucleotide sugar dehydrogenase

NC_018018
(Flexibacter litoralis DSM 6794)

3e-109

150) BN69_2394
( YP_006592496.1 )

polysaccharide biosynthesis protein

NC_018485
(Methylocystis sp. SC2)

3e-109

151) Snov_3207
( YP_003695101.1 )

nucleotide sugar dehydrogenase

NC_014217
(Starkeya novella DSM 506)

3e-109

152) PGA2_239p2030
( YP_006589788.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_018421
(Phaeobacter gallaeciensis 2.10)

3e-109

153) DEFDS_0339
( YP_003495596.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_013939
(Deferribacter desulfuricans SSM1)

4e-109

154) Nitsa_1731
( YP_004168726.1 )

nucleotide sugar dehydrogenase

NC_014935
(Nitratifractor salsuginis DSM 16511)

5e-109

155) PGA1_262p02300
( YP_006575230.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_018291
(Phaeobacter gallaeciensis DSM 17395)

5e-109

156) HMPREF0409_01486
( YP_008018603.1 )

nucleotide sugar dehydrogenase

NC_021281
(Fusobacterium sp. 4_8)

7e-109

157) Rvan_0399
( YP_004010784.1 )

nucleotide sugar dehydrogenase

NC_014664
(Rhodomicrobium vannielii ATCC 17100)

1e-108

158) Ppha_0623
( YP_002017540.1 )

nucleotide sugar dehydrogenase

NC_011060
(Pelodictyon phaeoclathratiforme BU-1)

1e-108

159) Mesau_05056
( YP_007306744.1 )

nucleotide sugar dehydrogenase

NC_019973
(Mesorhizobium australicum WSM2073)

2e-108

160) Nhal_0565
( YP_003526136.1 )

nucleotide sugar dehydrogenase

NC_013960
(Nitrosococcus halophilus Nc 4)

8e-109

161) Metme_1268
( YP_004512194.1 )

nucleotide sugar dehydrogenase

NC_015572
(Methylomonas methanica MC09)

9e-109

162) PLES_19091
( YP_002439513.1 )

UDP-glucose/GDP-mannose dehydrogenase-like protein

NC_011770
(Pseudomonas aeruginosa LESB58)

2e-108

163) PAM18_1813
( YP_005974401.1 )

UDP-glucose/GDP-mannose dehydrogenase-like protein

NC_017548
(Pseudomonas aeruginosa M18)

2e-108

164) HydHO_0627
( YP_007500000.1 )

nucleotide sugar dehydrogenase

NC_020411
(Hydrogenobaculum sp. HO)

2e-108

165) HydSN_0642
( YP_007647053.1 )

nucleotide sugar dehydrogenase

NC_020814
(Hydrogenobaculum sp. SN)

2e-108

166) Neut_0226
( YP_746475.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008344
(Nitrosomonas eutropha C91)

2e-108

167) WBGT
( NP_906323.1 )

UDP-glucose 6-dehydrogenase

NC_005090
(Wolinella succinogenes DSM 1740)

2e-108

168) TASI_0328
( YP_004874133.1 )

UDP-glucose dehydrogenase

NC_016043
(Taylorella asinigenitalis MCE3)

2e-108

169) GFO_2039
( YP_862071.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008571
(Gramella forsetii KT0803)

2e-108

170) Tgr7_2112
( YP_002514179.1 )

NDP-sugar dehydrogenase

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

2e-108

171) Solca_4331
( YP_006258497.1 )

nucleotide sugar dehydrogenase

NC_017770
(Solitalea canadensis DSM 3403)

3e-108

172) tll1201
( NP_681991.1 )

polysaccharide biosynthetic protein

NC_004113
(Thermosynechococcus elongatus BP-1)

3e-108

173) wbpO
( YP_007550220.1 )

UDP-glucose/GDP-mannose dehydrogenase-like protein

NC_020516
(Azoarcus sp. KH32C)

4e-108

174) HY04AAS1_0638
( YP_002121303.1 )

nucleotide sugar dehydrogenase

NC_011126
(Hydrogenobaculum sp. Y04AAS1)

4e-108

175) Alide_0758
( YP_004125411.1 )

nucleotide sugar dehydrogenase

NC_014910
(Alicycliphilus denitrificans BC)

4e-108

176) wbpO
( YP_007822230.1 )

polysaccharide biosynthesis protein

NC_021033
(Taylorella asinigenitalis 14/45)

5e-108

177) S58_25320
( YP_007512125.1 )

putative UDP-glucose/GDP-mannose dehydrogenase family protein

NC_020453
(Bradyrhizobium oligotrophicum S58)

6e-108

178) TVNIR_1836
( YP_007216978.1 )

UDP-glucose dehydrogenase

NC_019902
(Thioalkalivibrio nitratireducens DSM 14787)

6e-108

179) SpiBuddy_0263
( YP_004246295.1 )

nucleotide sugar dehydrogenase

NC_015152
(Sphaerochaeta globosa Buddy)

1e-107

180) vipA
( YP_004738188.1 )

Vi polysaccharide biosynthesis protein vipA

NC_015844
(Zobellia galactanivorans DsiJT)

1e-107

181) C380_07390
( YP_006853823.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_018708
(Acidovorax sp. KKS102)

1e-107

182) CHAB381_0666
( YP_001406247.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_009714
(Campylobacter hominis ATCC BAA-381)

7e-108

183) Ajs_3014
( YP_987224.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008782
(Acidovorax sp. JS42)

9e-108

184) Ssed_2973
( YP_001474708.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009831
(Shewanella sediminis HAW-EB3)

9e-108

185) Lcho_3069
( YP_001792094.1 )

nucleotide sugar dehydrogenase

NC_010524
(Leptothrix cholodnii SP-6)

1e-107

186) Pcryo_0613
( YP_579880.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007969
(Psychrobacter cryohalolentis K5)

1e-107

187) AZKH_1073
( YP_007550380.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_020516
(Azoarcus sp. KH32C)

1e-107

188) capL
( YP_007371802.1 )

protein CapL

NC_020134
(Clostridium stercorarium DSM 8532)

2e-107

189) Clst_0159
( YP_007678288.1 )

nucleotide sugar dehydrogenase

NC_020887
(Clostridium stercorarium DSM 8532)

2e-107

190) Pnap_3130
( YP_983349.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008781
(Polaromonas naphthalenivorans CJ2)

2e-107

191) TM1040_3606
( YP_611835.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008043
(Ruegeria sp. TM1040)

2e-107

192) vipA
( YP_001463385.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_009801
(Escherichia coli E24377A)

2e-107

193) Mesau_02813
( YP_007304583.1 )

nucleotide sugar dehydrogenase

NC_019973
(Mesorhizobium australicum WSM2073)

3e-107

194) Deide_20300
( YP_002786793.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_012526
(Deinococcus deserti VCD115)

4e-107

195) capL
( YP_007494059.1 )

Protein CapL

NC_020409
(Desulfovibrio piezophilus C1TLV30)

4e-107

196) TepRe1_1768
( YP_004461206.1 )

nucleotide sugar dehydrogenase

NC_015519
(Tepidanaerobacter acetatoxydans Re1)

5e-107

197) TepiRe1_1907
( YP_008619090.1 )

putative UDP-glucose/GDP-mannose dehydrogenase

NC_019954
(Tepidanaerobacter acetatoxydans Re1)

5e-107

198) Nwat_0480
( YP_003759766.1 )

nucleotide sugar dehydrogenase

NC_014315
(Nitrosococcus watsonii C-113)

7e-107

199) DMR_35790
( YP_002954956.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_012796
(Desulfovibrio magneticus RS-1)

8e-107

200) Pedsa_3228
( YP_004275586.1 )

nucleotide sugar dehydrogenase

NC_015177
(Pedobacter saltans DSM 12145)

8e-107

201) ebA35
( YP_157038.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_006513
(Aromatoleum aromaticum EbN1)

9e-107

202) Tint_1300
( YP_003643018.1 )

nucleotide sugar dehydrogenase

NC_014153
(Thiomonas intermedia K12)

1e-106

203) Bpet0233
( YP_001628835.1 )

NDP-sugar dehydrogenase

NC_010170
(Bordetella petrii DSM 12804)

1e-106

204) wbpO
( YP_160364.1 )

UDP-glucose/GDP-mannose dehydrogenase-like protein

NC_006513
(Aromatoleum aromaticum EbN1)

2e-106

205) FB2170_10011
( YP_003862879.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_014472
(Maribacter sp. HTCC2170)

2e-106

206) BBR47_42590
( YP_002773740.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_012491
(Brevibacillus brevis NBRC 100599)

2e-106

207) Oscil6304_3548
( YP_007087031.1 )

nucleotide sugar dehydrogenase

NC_019693
(Oscillatoria acuminata PCC 6304)

2e-106

208) TVNIR_0671
( YP_007215849.1 )

UDP-glucose dehydrogenase

NC_019902
(Thioalkalivibrio nitratireducens DSM 14787)

2e-106

209) TK90_0611
( YP_003459862.1 )

nucleotide sugar dehydrogenase

NC_013889
(Thioalkalivibrio sp. K90mix)

2e-106

210) TEQUI_0942
( YP_004130016.1 )

UDP-glucose dehydrogenase

NC_014914
(Taylorella equigenitalis MCE9)

2e-106

211) Daro_2440
( YP_285645.1 )

UDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding

NC_007298
(Dechloromonas aromatica RCB)

3e-106

212) Alvin_2213
( YP_003444164.1 )

nucleotide sugar dehydrogenase

NC_013851
(Allochromatium vinosum DSM 180)

3e-106

213) Oweho_3303
( YP_004990899.1 )

nucleotide sugar dehydrogenase

NC_016599
(Owenweeksia hongkongensis DSM 17368)

3e-106

214) wbpO
( YP_007826296.1 )

polysaccharide biosynthesis protein

NC_021036
(Taylorella equigenitalis 14/56)

3e-106

215) wbpO
( YP_006502045.1 )

polysaccharide biosynthesis protein

NC_018108
(Taylorella equigenitalis ATCC 35865)

3e-106

216) Cphy_2214
( YP_001559319.1 )

nucleotide sugar dehydrogenase

NC_010001
(Clostridium phytofermentans ISDg)

3e-106

217) DDD_3559
( YP_007378707.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_020156
(Nonlabens dokdonensis DSW-6)

4e-106

218) EAT1b_1374
( YP_002885746.1 )

nucleotide sugar dehydrogenase

NC_012673
(Exiguobacterium sp. AT1b)

5e-106

219) H045_04675
( YP_007396507.1 )

UDP-glucose/GDP-mannose dehydrogenase-like protein

NC_020209
(Pseudomonas poae RE*1-1-14)

5e-106

220) capL
( YP_006788948.1 )

capsular polysaccharide biosynthesis protein, type 1

NC_018664
(Clostridium acidurici 9a)

5e-106

221) Dfer_4788
( YP_003089154.1 )

nucleotide sugar dehydrogenase

NC_013037
(Dyadobacter fermentans DSM 18053)

5e-106

222) capL
( YP_003976310.1 )

protein CapL

NC_014640
(Achromobacter xylosoxidans A8)

6e-106

223) LHK_02806
( YP_002796795.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_012559
(Laribacter hongkongensis HLHK9)

7e-106

224) ABLL_2295
( YP_005554487.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_017192
(Arcobacter sp. L)

7e-106

225) wbpO
( YP_004843085.1 )

UDP-N-acetyl-D-galactosamine dehydrogenase

NC_016001
(Flavobacterium branchiophilum FL-15)

1e-105

226) Mlg_0796
( YP_741640.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008340
(Alkalilimnicola ehrlichii MLHE-1)

1e-105

227) BDI_0027
( YP_001301444.1 )

UDP-glucose-6 dehydrogenase

NC_009615
(Parabacteroides distasonis ATCC 8503)

1e-105

228) Daes_0799
( YP_004120562.1 )

nucleotide sugar dehydrogenase

NC_014844
(Desulfovibrio aespoeensis Aspo-2)

1e-105

229) Solca_4312
( YP_006258478.1 )

nucleotide sugar dehydrogenase

NC_017770
(Solitalea canadensis DSM 3403)

1e-105

230) vipA
( YP_003624136.1 )

Vi polysaccharide biosynthesis protein; putative UDP-glucose 6-dehydrogenase

NC_014145
(Thiomonas sp. 3As)

8e-106

231) wbpO
( YP_003809789.1 )

UDP-N-acetyl-D-galactosamine dehydrogenase

NC_014366
(gamma proteobacterium HdN1)

8e-106

232) Dvul_0210
( YP_965661.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008751
(Desulfovibrio vulgaris DP4)

2e-105

233) DVU3176
( YP_012386.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_002937
(Desulfovibrio vulgaris Hildenborough)

2e-105

234) Deval_2933
( YP_005703713.1 )

nucleotide sugar dehydrogenase

NC_017310
(Desulfovibrio vulgaris RCH1)

2e-105

235) wecC
( YP_679971.1 )

UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase

NC_008255
(Cytophaga hutchinsonii ATCC 33406)

2e-105

236) Noc_2637
( YP_344620.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007484
(Nitrosococcus oceani ATCC 19707)

2e-105

237) B739_1127
( YP_006723625.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_018609
(Riemerella anatipestifer RA-CH-1)

2e-105

238) M5M_08915
( YP_006916700.1 )

polysaccharide biosynthesis protein

NC_018868
(Simiduia agarivorans SA1)

2e-105

239) Weevi_0962
( YP_004238250.1 )

nucleotide sugar dehydrogenase

NC_015144
(Weeksella virosa DSM 16922)

2e-105

240) Lacal_1030
( YP_004579306.1 )

nucleotide sugar dehydrogenase

NC_015638
(Lacinutrix sp. 5H-3-7-4)

3e-105

241) wecC
( YP_003777570.1 )

NDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_014323
(Herbaspirillum seropedicae SmR1)

4e-105

242) tviB
( NP_842276.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_004757
(Nitrosomonas europaea ATCC 19718)

4e-105

243) CA2559_13083
( YP_003717358.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein

NC_014230
(Croceibacter atlanticus HTCC2559)

4e-105

244) Niako_5359
( YP_005010999.1 )

nucleotide sugar dehydrogenase

NC_016609
(Niastella koreensis GR20-10)

5e-105

245) FCOL_03640
( YP_004941361.1 )

UDP-N-acetyl-D-galactosamine dehydrogenase

NC_016510
(Flavobacterium columnare ATCC 49512)

6e-105

246) R2APBS1_2152
( YP_007590503.1 )

nucleotide sugar dehydrogenase

NC_020541
(Rhodanobacter sp. 2APBS1)

6e-105

247) tviB
( NP_458740.1 )

Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase

NC_003198
(Salmonella enterica CT18)

6e-105

248) STBHUCCB_46080
( YP_005220024.1 )

Vi polysaccharide biosynthesis protein vipA/tviB

NC_016832
(Salmonella enterica P-stx-12)

6e-105

249) tviB
( YP_002639960.1 )

Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase

NC_012125
(Salmonella enterica RKS4594)

6e-105

250) tviB
( NP_807945.1 )

VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase

NC_004631
(Salmonella enterica Ty2)

6e-105

251) TY21A_22165
( YP_007928593.1 )

Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase

NC_021176
(Salmonella enterica Ty21a)

6e-105

252) vipA
( YP_004917177.1 )

Vi polysaccharide biosynthesis protein vipA/tviB

NC_016112
(Methylomicrobium alcaliphilum 20Z)

1e-104

253) Sama_2260
( YP_928135.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008700
(Shewanella amazonensis SB2B)

1e-104

254) CJA_3426
( YP_001983880.1 )

polysaccharide biosynthesis protein

NC_010995
(Cellvibrio japonicus Ueda107)

1e-104

255) wbpO
( YP_001296190.1 )

UDP-N-acetyl-D-galactosamine dehydrogenase

NC_009613
(Flavobacterium psychrophilum JIP02/86)

7e-105

256) ELI_4555
( YP_003962452.1 )

nucleotide sugar dehydrogenase

NC_014624
(Eubacterium limosum KIST612)

8e-105

257) Belba_2379
( YP_006407694.1 )

nucleotide sugar dehydrogenase

NC_018010
(Belliella baltica DSM 15883)

8e-105

258) Mmwyl1_0821
( YP_001339689.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009654
(Marinomonas sp. MWYL1)

1e-104

259) Sph21_1811
( YP_004317043.1 )

nucleotide sugar dehydrogenase

NC_015277
(Sphingobacterium sp. 21)

1e-104

260) HCH_02713
( YP_433924.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_007645
(Hahella chejuensis KCTC 2396)

2e-104

261) Krodi_2790
( YP_004432033.1 )

nucleotide sugar dehydrogenase

NC_015496
(Krokinobacter sp. 4H-3-7-5)

2e-104

262) Hprae_0334
( YP_005835650.1 )

nucleotide sugar dehydrogenase

NC_017455
(Halanaerobium praevalens DSM 2228)

2e-104

263) NH44784_045621
( YP_008031627.1 )

UDP-glucose dehydrogenase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

2e-104

264) Cycma_3080
( YP_004775039.1 )

nucleotide sugar dehydrogenase

NC_015914
(Cyclobacterium marinum DSM 745)

3e-104

265) RPB_1553
( YP_485174.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007778
(Rhodopseudomonas palustris HaA2)

4e-104

266) AZOBR_p60035
( YP_004987579.1 )

UDP-glucose/GDP-mannose dehydrogenase family protein; putative Capsular polysaccharide biosynthesis protein

NC_016597
(Azospirillum brasilense Sp245)

5e-104

267) wbpO
( YP_005362656.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_017027
(Pasteurella multocida HN06)

5e-104

268) Tbd_0098
( YP_313856.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007404
(Thiobacillus denitrificans ATCC 25259)

5e-104

269) GYMC10_2036
( YP_003242124.1 )

nucleotide sugar dehydrogenase

NC_013406
(Paenibacillus sp. Y412MC10)

5e-104

270) BSn5_04355
( YP_004204526.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_014976
(Bacillus subtilis BSn5)

1e-103

271) Theam_0601
( YP_004151214.1 )

nucleotide sugar dehydrogenase

NC_014926
(Thermovibrio ammonificans HB-1)

5e-104

272) CT0227
( NP_661132.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_002932
(Chlorobium tepidum TLS)

1e-103

273) Dde_3187
( YP_389676.1 )

nucleotide sugar dehydrogenase

NC_007519
(Desulfovibrio alaskensis G20)

1e-103

274) wbpO
( YP_005356699.1 )

UDP-N-acetyl-D-galactosamine dehydrogenase

NC_017025
(Flavobacterium indicum GPTSA100-9)

1e-103

275) NT08PM_0224
( YP_006239142.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_017764
(Pasteurella multocida 3480)

1e-103

276) PM1003
( NP_245940.1 )

hypothetical protein

NC_002663
(Pasteurella multocida Pm70)

1e-103

277) Celly_2638
( YP_004263326.1 )

nucleotide sugar dehydrogenase

NC_015167
(Cellulophaga lytica DSM 7489)

1e-103

278) TREPR_0345
( YP_004532535.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_015578
(Treponema primitia ZAS-2)

2e-103

279) G148_0867
( YP_007355865.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_020125
(Riemerella anatipestifer RA-CH-2)

2e-103

280) RIA_1493
( YP_006017927.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_017569
(Riemerella anatipestifer RA-GD)

2e-103

281) Cpin_4734
( YP_003124371.1 )

nucleotide sugar dehydrogenase

NC_013132
(Chitinophaga pinensis DSM 2588)

2e-103

282) wbpO
( YP_005324290.1 )

nucleotide sugar dehydrogenase

NC_016940
(Saprospira grandis Lewin)

3e-103

283) vipA
( YP_005176086.1 )

Vi polysaccharide biosynthesis protein VipA/TviB

NC_016808
(Pasteurella multocida 36950)

4e-103

284) Riean_0757
( YP_004045427.1 )

nucleotide sugar dehydrogenase

NC_014738
(Riemerella anatipestifer ATCC 11845)

5e-103

285) RA0C_0994
( YP_005394470.1 )

nucleotide sugar dehydrogenase

NC_017045
(Riemerella anatipestifer ATCC 11845)

5e-103

286) Elen_1917
( YP_003182270.1 )

nucleotide sugar dehydrogenase

NC_013204
(Eggerthella lenta DSM 2243)

7e-103

287) Cvib_0685
( YP_001130202.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009337
(Chlorobium phaeovibrioides DSM 265)

1e-102

288) Desal_0761
( YP_002990366.1 )

nucleotide sugar dehydrogenase

NC_012881
(Desulfovibrio salexigens DSM 2638)

1e-102

289) Lbys_0845
( YP_003996946.1 )

nucleotide sugar dehydrogenase

NC_014655
(Leadbetterella byssophila DSM 17132)

1e-102

290) amb0144
( YP_419507.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_007626
(Magnetospirillum magneticum AMB-1)

1e-102

291) Cthe_2340
( YP_001038735.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009012
(Clostridium thermocellum ATCC 27405)

1e-102

292) Clo1313_3003
( YP_005689432.1 )

nucleotide sugar dehydrogenase

NC_017304
(Clostridium thermocellum DSM 1313)

1e-102

293) Dret_2415
( YP_003199275.1 )

nucleotide sugar dehydrogenase

NC_013223
(Desulfohalobium retbaense DSM 5692)

2e-102

294) PG1277
( NP_905458.1 )

UDP-glucose-6 dehydrogenase

NC_002950
(Porphyromonas gingivalis W83)

2e-102

295) capL
( YP_006761204.1 )

biosynthesis protein of type I capsular polysaccharide, nucleotide sugar dehydrogenase CapL

NC_018645
(Desulfobacula toluolica Tol2)

3e-102

296) PGTDC60_2201
( YP_004510904.1 )

UDP-glucose-6 dehydrogenase

NC_015571
(Porphyromonas gingivalis TDC60)

3e-102

297) lp12_0849
( YP_005185218.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_016811
(Legionella pneumophila ATCC 43290)

3e-102

298) LP6_0816
( YP_008062533.1 )

UDP-N-acetyl-D-galactosamine dehydrogenase

NC_021350
(Legionella pneumophila Thunder Bay)

3e-102

299) CFF8240_1397
( YP_892538.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_008599
(Campylobacter fetus 82-40)

4e-102

300) Celal_3143
( YP_004165915.1 )

nucleotide sugar dehydrogenase

NC_014934
(Cellulophaga algicola DSM 14237)

4e-102

301) BDI_1308
( YP_001302690.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_009615
(Parabacteroides distasonis ATCC 8503)

4e-102

302) Thimo_3602
( YP_007245888.1 )

nucleotide sugar dehydrogenase

NC_019940
(Thioflavicoccus mobilis 8321)

6e-102

303) MED152_05730
( YP_007671168.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_020830
(Polaribacter sp. MED152)

1e-101

304) Phep_3952
( YP_003094205.1 )

nucleotide sugar dehydrogenase

NC_013061
(Pedobacter heparinus DSM 2366)

2e-101

305) Slin_4077
( YP_003388863.1 )

nucleotide sugar dehydrogenase

NC_013730
(Spirosoma linguale DSM 74)

2e-101

306) wecC
( YP_002603569.1 )

protein WecC

NC_012108
(Desulfobacterium autotrophicum HRM2)

3e-101

307) HTH_1295
( YP_003432949.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_013799
(Hydrogenobacter thermophilus TK-6)

4e-101

308) Hydth_1287
( YP_005511968.1 )

nucleotide sugar dehydrogenase

NC_017161
(Hydrogenobacter thermophilus TK-6)

4e-101

309) Tery_2267
( YP_721968.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_008312
(Trichodesmium erythraeum IMS101)

4e-101

310) PGN_0613
( YP_001928729.1 )

UDP-glucose 6-dehydrogenase

NC_010729
(Porphyromonas gingivalis ATCC 33277)

4e-101

311) Echvi_4400
( YP_007226594.1 )

nucleotide sugar dehydrogenase

NC_019904
(Echinicola vietnamensis DSM 17526)

1e-100

312) Odosp_3555
( YP_004254686.1 )

nucleotide sugar dehydrogenase

NC_015160
(Odoribacter splanchnicus DSM 220712)

2e-100

313) Fluta_2063
( YP_004344887.1 )

nucleotide sugar dehydrogenase

NC_015321
(Fluviicola taffensis DSM 16823)

2e-100

314) SUN_1555
( YP_001358862.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009663
(Sulfurovum sp. NBC37-1)

2e-100

315) F7308_0763
( YP_004647290.1 )

UDP-glucose dehydrogenase

NC_015696
(Francisella sp. TX077308)

3e-100

316) Odosp_0958
( YP_004252209.1 )

nucleotide sugar dehydrogenase

NC_015160
(Odoribacter splanchnicus DSM 220712)

4e-100

317) Cpin_4763
( YP_003124399.1 )

nucleotide sugar dehydrogenase

NC_013132
(Chitinophaga pinensis DSM 2588)

4e-100

318) Halhy_5450
( YP_004450148.1 )

nucleotide sugar dehydrogenase

NC_015510
(Haliscomenobacter hydrossis DSM 1100)

5e-100

319) BBR47_57510
( YP_002775232.1 )

hypothetical protein

NC_012491
(Brevibacillus brevis NBRC 100599)

7e-100

320) BDI_2219
( YP_001303572.1 )

UDP-glucose-6 dehydrogenase

NC_009615
(Parabacteroides distasonis ATCC 8503)

9e-100

321) Hipma_0176
( YP_004339214.1 )

nucleotide sugar dehydrogenase

NC_015318
(Hippea maritima DSM 10411)

2e-99

322) CYCME_1414
( YP_008374101.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_021917
(Cycloclasticus zancles 7-ME)

3e-99

323) Echvi_4406
( YP_007226600.1 )

nucleotide sugar dehydrogenase

NC_019904
(Echinicola vietnamensis DSM 17526)

4e-99

324) OB2931
( NP_693853.1 )

VI polysaccharide biosynthesis

NC_004193
(Oceanobacillus iheyensis HTE831)

5e-99

325) K734_02785
( YP_008034058.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_021286
(Idiomarina loihiensis GSL 199)

5e-99

326) wecC
( YP_154946.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_006512
(Idiomarina loihiensis L2TR)

5e-99

327) AL1_18430
( YP_007816971.1 )

nucleotide sugar dehydrogenase

NC_021030
(Alistipes shahii WAL 8301)

2e-98

328) SELR_02020
( YP_005431933.1 )

putative UDP-N-acetyl-D-mannosamine dehydrogenase

NC_017068
(Selenomonas ruminantium TAM6421)

2e-98

329) LAW_30091
( YP_007366441.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_020130
(Lawsonia intracellularis N343)

3e-98

330) LIC093
( YP_595709.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_008014
(Lawsonia intracellularis PHE/MN1-00)

3e-98

331) BF1441
( YP_098726.1 )

UDP-glucose-6 dehydrogenase

NC_006347
(Bacteroides fragilis YCH46)

3e-98

332) Palpr_0979
( YP_004042114.1 )

nucleotide sugar dehydrogenase

NC_014734
(Paludibacter propionicigenes WB4)

2e-97

333) wcfF
( YP_210707.1 )

UDP-glucose-6 dehydrogenase

NC_003228
(Bacteroides fragilis NCTC 9343)

2e-97

334) wbgT
( YP_007320182.1 )

UDP-N-acetyl-D-galactosamine dehydrogenase

NC_020054
(Fibrella aestuarina BUZ 2)

3e-97

335) Aeqsu_2222
( YP_006418697.1 )

nucleotide sugar dehydrogenase

NC_018013
(Aequorivita sublithincola DSM 14238)

1e-96

336) Suden_1423
( YP_393935.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007575
(Sulfurimonas denitrificans ATCC 33889)

9e-97

337) capL
( YP_006837242.1 )

nucleotide sugar dehydrogenase subfamily

NC_018697
(Cycloclasticus sp. P1; MCCC 1A01040)

3e-96

338) CYCME_1892
( YP_008374566.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_021917
(Cycloclasticus zancles 7-ME)

3e-96

339) THEYE_A0424
( YP_002248271.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_011296
(Thermodesulfovibrio yellowstonii DSM 11347)

1e-95

340) vipA
( YP_201721.1 )

polysaccharide biosynthetic protein

NC_006834
(Xanthomonas oryzae KACC10331)

2e-95

341) PXO_01511
( YP_001914412.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_010717
(Xanthomonas oryzae PXO99A)

2e-95

342) XOC_2570
( YP_005628857.1 )

VI polysaccharide biosynthesis protein VipA-tviB

NC_017267
(Xanthomonas oryzae BLS256)

3e-95

343) HBHAL_2424
( YP_006180044.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_017668
(Halobacillus halophilus DSM 2266)

4e-95

344) XOO_2935
( YP_451964.1 )

polysaccharide biosynthetic protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

4e-95

345) SAR116_1952
( YP_003552279.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_014010
(Candidatus Puniceispirillum marinum IMCC1322)

9e-95

346) vipA
( NP_642422.1 )

polysaccharide biosynthetic protein

NC_003919
(Xanthomonas axonopodis 306)

1e-94

347) XAC29_10640
( YP_007636550.1 )

polysaccharide biosynthetic protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

1e-94

348) wecC
( YP_007649605.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_020815
(Xanthomonas citri Aw12879)

1e-94

349) DND132_1765
( YP_005167774.1 )

nucleotide sugar dehydrogenase

NC_016803
(Desulfovibrio desulfuricans ND132)

2e-94

350) FIC_00330
( YP_003094859.1 )

UDP-glucose dehydrogenase

NC_013062
(Flavobacteriaceae bacterium 3519-10)

3e-94

351) Thal_0299
( YP_003473061.1 )

nucleotide sugar dehydrogenase

NC_013894
(Thermocrinis albus DSM 14484)

3e-94

352) XALc_1695
( YP_003376182.1 )

polysaccharide biosynthesis protein

NC_013722
(Xanthomonas albilineans GPE PC73)

1e-93

353) wbpO
( YP_004896193.1 )

nucleotide sugar dehydrogenase

NC_016077
(Acidaminococcus intestini RyC-MR95)

2e-93

354) Mrad2831_1176
( YP_001753866.1 )

nucleotide sugar dehydrogenase

NC_010505
(Methylobacterium radiotolerans JCM 2831)

4e-93

355) PSE_3209
( YP_005081739.1 )

udp-glucose 6-dehydrogenase

NC_016642
(Pseudovibrio sp. FO-BEG1)

1e-92

356) Bache_2159
( YP_004161714.1 )

nucleotide sugar dehydrogenase

NC_014933
(Bacteroides helcogenes P 36-108)

2e-92

357) Runsl_0776
( YP_004654348.1 )

nucleotide sugar dehydrogenase

NC_015703
(Runella slithyformis DSM 19594)

1e-91

358) XCV2417
( YP_364148.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007508
(Xanthomonas campestris 85-10)

1e-91

359) Coch_1202
( YP_003141313.1 )

nucleotide sugar dehydrogenase

NC_013162
(Capnocytophaga ochracea DSM 7271)

2e-91

360) R2APBS1_3317
( YP_007591616.1 )

nucleotide sugar dehydrogenase

NC_020541
(Rhodanobacter sp. 2APBS1)

2e-91

361) XACM_2206
( YP_004851767.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_016010
(Xanthomonas axonopodis F1)

2e-91

362) XCR_2370
( YP_005637373.1 )

VI polysaccharide biosynthesis protein VipA-tviB

NC_017271
(Xanthomonas campestris 756C)

2e-91

363) SL003B_2228
( YP_004303955.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_015259
(Polymorphum gilvum SL003B-26A1)

6e-91

364) xccb100_2391
( YP_001903796.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_010688
(Xanthomonas campestris B100)

7e-91

365) A1S_0052
( YP_001083149.1 )

WecC protein

NC_009085
(Acinetobacter baumannii ATCC 17978)

9e-91

366) HCBAA847_1126
( YP_007600994.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

2e-90

367) HCN_0854
( YP_006235219.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_017761
(Helicobacter cinaedi PAGU611)

2e-90

368) wbpO
( YP_001971522.1 )

capsular polysaccharide biosynthesis protein

NC_010943
(Stenotrophomonas maltophilia K279a)

2e-89

369) Selsp_0178
( YP_004412615.1 )

nucleotide sugar dehydrogenase

NC_015437
(Selenomonas sputigena ATCC 35185)

3e-89

370) BFO_2943
( YP_005015602.1 )

nucleotide sugar dehydrogenase

NC_016610
(Tannerella forsythia ATCC 43037)

4e-89

371) Natoc_3880
( YP_007311371.1 )

nucleotide sugar dehydrogenase

NC_019974
(Natronococcus occultus SP4)

1e-88

372) HH1660
( NP_861191.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

6e-89

373) wbpO
( YP_004870894.1 )

VI polysaccharide biosynthesis protein VipA/tviB

NC_016041
(Glaciecola nitratireducens FR1064)

2e-88

374) XC_2091
( YP_243167.1 )

polysaccharide biosynthetic protein

NC_007086
(Xanthomonas campestris 8004)

5e-88

375) vipA
( NP_637455.1 )

polysaccharide biosynthetic protein

NC_003902
(Xanthomonas campestris ATCC 33913)

5e-88

376) wbpO
( YP_003516656.1 )

polysaccharide biosynthesis protein

NC_013949
(Helicobacter mustelae 12198)

8e-88

377) wbpO
( YP_006184359.1 )

Polysaccharide biosynthetic protein

NC_017671
(Stenotrophomonas maltophilia D457)

8e-88

378) Mpal_0929
( YP_002466004.1 )

nucleotide sugar dehydrogenase

NC_011832
(Methanosphaerula palustris E1-9c)

1e-87

379) wecC
( YP_001484668.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_009840
(Prochlorococcus marinus MIT 9215)

2e-87

380) BurJV3_1487
( YP_004792042.1 )

nucleotide sugar dehydrogenase

NC_015947
(Stenotrophomonas maltophilia JV3)

4e-87

381) Smal_1431
( YP_002027819.1 )

nucleotide sugar dehydrogenase

NC_011071
(Stenotrophomonas maltophilia R551-3)

1e-86

382) XF1183
( NP_298473.1 )

polysaccharide biosynthetic protein

NC_002488
(Xylella fastidiosa 9a5c)

9e-87

383) NJ7G_3708
( YP_006543000.1 )

nucleotide sugar dehydrogenase

NC_018224
(Natrinema sp. J7-2)

2e-86

384) Fraau_2030
( YP_005378096.1 )

nucleotide sugar dehydrogenase

NC_017033
(Frateuria aurantia DSM 6220)

3e-86

385) Nmag_3288
( YP_003481400.1 )

nucleotide sugar dehydrogenase

NC_013922
(Natrialba magadii ATCC 43099)

4e-86

386) Saro_3150
( YP_498419.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_007794
(Novosphingobium aromaticivorans DSM 12444)

1e-85

387) Psesu_1326
( YP_004146404.1 )

nucleotide sugar dehydrogenase

NC_014924
(Pseudoxanthomonas suwonensis 11-1)

2e-85

388) SPO0556
( YP_165817.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_003911
(Ruegeria pomeroyi DSS-3)

4e-85

389) Htur_1141
( YP_003402706.1 )

nucleotide sugar dehydrogenase

NC_013743
(Haloterrigena turkmenica DSM 5511)

7e-84

390) Natpe_3027
( YP_007281725.1 )

nucleotide sugar dehydrogenase

NC_019962
(Natrinema pellirubrum DSM 15624)

8e-83

391) Swit_1201
( YP_001261705.1 )

UDP-glucose/GDP-mannose dehydrogenase

NC_009511
(Sphingomonas wittichii RW1)

9e-83

392) vipA
( NP_778697.1 )

polysaccharide biosynthetic protein

NC_004556
(Xylella fastidiosa Temecula1)

7e-82

393) Xfasm12_0525
( YP_001775162.1 )

polysaccharide biosynthetic protein

NC_010513
(Xylella fastidiosa M12)

8e-82

394) XfasM23_0464
( YP_001829185.1 )

nucleotide sugar dehydrogenase

NC_010577
(Xylella fastidiosa M23)

8e-82

395) Natoc_2971
( YP_007310516.1 )

nucleotide sugar dehydrogenase

NC_019974
(Natronococcus occultus SP4)

1e-81

396) Mpal_2131
( YP_002467152.1 )

nucleotide sugar dehydrogenase

NC_011832
(Methanosphaerula palustris E1-9c)

2e-80

397) capL
( YP_003453865.1 )

protein capL

NC_013861
(Legionella longbeachae NSW150)

1e-79

398) Memar_0699
( YP_001046614.1 )

UDP-glucose 6-dehydrogenase

NC_009051
(Methanoculleus marisnigri JR1)

1e-77

399) Halru_2869
( YP_007285572.1 )

nucleotide sugar dehydrogenase

NC_019964
(Halovivax ruber XH-70)

4e-77

400) wecC
( YP_006349821.1 )

UDP-glucose 6-dehydrogenase

NC_017941
(Haloferax mediterranei CGMCC 1.2087)

5e-75

401) HBZC1_15170
( YP_004608215.1 )

UDP-glucose dehydrogenase

NC_015674
(Helicobacter bizzozeronii CIII-1)

5e-74

402) capL
( YP_006370133.1 )

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

NC_017956
(Tistrella mobilis KA081020-065)

7e-74

403) PC1_2901
( YP_003018461.1 )

nucleotide sugar dehydrogenase

NC_012917
(Pectobacterium carotovorum PC1)

2e-73

404) wecC
( YP_006351245.1 )

nucleotide sugar dehydrogenase/UDP-N-acetyl-D-galactosamine 6-dehydrogenase

NC_017944
(Haloferax mediterranei CGMCC 1.2087)

2e-72

405) BMB171_C4869
( YP_003667397.1 )

nucleotide sugar dehydrogenase subfamily protein

NC_014171
(Bacillus thuringiensis BMB171)

3e-70

406) Alfi_0914
( YP_006409967.1 )

nucleotide sugar dehydrogenase

NC_018011
(Alistipes finegoldii DSM 17242)

2e-68

407) Metfor_1144
( YP_007248697.1 )

nucleotide sugar dehydrogenase

NC_019943
(Methanoregula formicicum SMSP)

1e-66

408) Metbo_0866
( YP_004290088.1 )

nucleotide sugar dehydrogenase

NC_015216
(Methanobacterium sp. AL-21)

4e-59

409) Htur_2168
( YP_003403722.1 )

nucleotide sugar dehydrogenase

NC_013743
(Haloterrigena turkmenica DSM 5511)

4e-58

410) PH0429
( NP_142411.1 )

VI polysaccharide biosynthesis protein

NC_000961
(Pyrococcus horikoshii OT3)

1e-55

411) Mtc_1451
( YP_005380721.1 )

nucleotide sugar dehydrogenase

NC_017034
(Methanocella conradii HZ254)

8e-54

412) Hbut_1420
( YP_001013589.1 )

polysaccharide biosynthesis protein

NC_008818
(Hyperthermus butylicus DSM 5456)

2e-42

• Sequence Alignments

1) capL in NC_012121


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  560 bits (2113),  Expect = 6e-161, Method: Compositional matrix adjust.
 Identities = 322/424 (76%), Positives = 383/424 (91%), Gaps = 0/424 (0%)

Query  1    MDRKIAVVGLGYVGLPVAVAFGKQQPVIGFDINEKRIEELKSNYDRTNEVTTEDLKETKI  60
            M+R+IAVVGLGYVGLPVAV+FG+++ VIGFDINE RI ELK+NYDRTNEVT + LK+T+I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  61   TFTNNIDELSKADFIIVAVPTPINKHNQPDLTPLLKASETVGKALKEGTIVVYESTVYPG  120
             +T+N ++L KADFII+AVPTPI+KHN+PDL PLLKASETVGK +  +TIVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  121  ATEEDCVPILERFSGLQSGKDFFVGYSPERINPGDKVHTFETITKVVSGQTPEVLDIVAE  180
            ATEE+CVP+LE++SGL  GKDFFVGYSPERINPGDKVHTFETITKVVSGQT EVL+IVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  181  VYSSVVNAGVHKASSIKVAEAAKVIENTQRDVNIALMNEFAVIFDKVGIDTNEVLEASGT  240
            VYSSVV AGVHKASSIKVAEAAKVIENTQRDVNIALMNE+A+IFDK++IDTNEVL ASGT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQELGHHPEIILAGRRINDNMAEHVATNVVKEL  300
            KWNFLNFKPGLVGGHCIGVDPYYLTHKAQE+GHHPE+ILAGRRINDNMA  +A+NV+KEL
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  301  LKKGLEVNGMTINLLGLTFKENCPDLRNTKVIDIIRELEEYGINVIVNDVEADKETAKQL  360
            LK+GLEV+G T+N+LGLTFKENCPDLRNTKVI+II EL EYG+NV VNDVEADK+ AK++
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  361  YNIDLKDVEDMEVSDALIFAVPHKTYIEDKDKYLRLLSDNGVIFDIKGLINKNNLNENQS  420
            + +DL D  ++ + D ++FAVPHK Y+E+K  Y+ L+ D G++FDIKG+IN ++LN +Q 
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELNVSQR  420

Query  421  IWSL  424
            +W L
Sbjct  421  LWRL  424

2) capL in NC_011999


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  524 bits (1978),  Expect = 2e-150, Method: Compositional matrix adjust.
 Identities = 306/424 (73%), Positives = 372/424 (88%), Gaps = 0/424 (0%)

Query  1    MNRKIAVVGLGYVGLPVAAAFGKLHEVIGFDINESRIQELKDGYDRTNEVKSEDLAATKI  60
            MNR+IAVVGLGYVGLPVA +FG+ H VIGFDINESRI+ELK+ YDRTNEV  + L  T+I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  61   NFTSNKSDLAKADFIIVAVPTPINKNNQPDLTPLIKASETVGSAMEKGTIVVYESTVYPG  120
            ++TSN  DL KADFII+AVPTPI+K+N+PDL PL+KASETVG  +  +TIVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  121  ATREDCVPVLEQFSGLKCGEDFFVGYSPERINPGDKVHTFETITKVVSGQTPEVLEIVAD  180
            AT E+CVPVLE++SGL CG DFFVGYSPERINPGDKVHTFETITKVVSGQT EVLEIVAD
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  181  VYGSVVKAGVHKAPTIEVAEAAKVIENTQRDINIALMNELALIFDKAGINTKDVLEAAGT  240
            VY+SVV AGVHKA++I VAEAAKVIENTQRD+NIALMNELA+IFDK +I+T++VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  241  KWNFLKFTPGLVGGHCIGVDPYYLTHKAQELGHHPEVILSGRRINDGMSKYIASKIVKEM  300
            KWNFL+F PGLVGGHCIGVDPYYLTHKAQE+GHHPEVIL+GRRIND M+KYIAS+++KE+
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  301  LSKGLTVNKSNVNVLGLTFKENCPDLRNTKVIDIIRELEEYGITVNVHdakadkeeakkF  360
            L +GL V+ + VNVLGLTFKENCPDLRNTKVI+II EL EYG+ V V+D  ADK+EAKKF
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  361  YNIELKEVNELPETDLVLFAVSHNEYIQNKEEFLKKLSNNGIVFDIKGIINKEDTSNNQT  420
            + ++L + +EL   D+VLFAV+H++Y++NK ++++ + + GIVFDIKGIIN ++ + +Q 
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELNVSQR  420

Query  421  IWSL  424
            +W L
Sbjct  421  LWRL  424

3) GWCH70_3259 in NC_012793


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  460 bits (1732),  Expect = 7e-131, Method: Compositional matrix adjust.
 Identities = 279/426 (66%), Positives = 350/426 (83%), Gaps = 2/426 (0%)

Query  1    MNRKIAVVGLGYVGLPVAVAFGKKGRIIGFDINEHRINTLKQGIDYTKEVESQDLLEADI  60
            MNR+IAVVGLGYVGLPVAV+FG+K ++IGFDINE RI+ LK+  D T+EV  + L +++I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  61   DFTNDPSRLREADFIIVAVPTPITETKQPDLTPLIKASETVGSNLQKGAIVVYESTVYPG  120
            ++T+++  L+ ADFII+AVPTPI   ++PDL PL+KASETVG  +  ++IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  121  ATEEVCVPVLEKASGLKAGVDFFVGYSPERINPGDKEHTFTKITKVVSGQNDEVLEIIAG  180
            ATEE CVPVLEK SGL  G DFFVGYSPERINPGDK HTF  ITKVVSGQ  EVLEI+A+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  181  VYGSVVEAGVYRASSIKVAEAAKVIENTQRDLNIALMNELAIIFDKLGIDTAEVLEAAGT  240
            VY+SVV AGV +ASSIKVAEAAKVIENTQRD+NIALMNELAIIFDKL+IDT EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  241  KWNFLPFTPGLVGGHCIGVDPYYLTHKAESVGYHPEVILAGRRINDNMGKFIATSLVKQM  300
            KWNFL F PGLVGGHCIGVDPYYLTHKA+ VG HPEVILAGRRINDNM+K+IA++++K++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  301  IHQNMPIQGARVTVLGLTFKENVPDLRNSKVIDVIRELQEFGVEVQVTDALADKDEAVRE  360
            + Q + +QGA V VLGLTFKEN PDLRN+KVI++I EL+E+G++V V D  ADK+EA + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  361  YGIELVDYDKLIPADAVVLAVPHDEYVEKGWEQFDRLLKHGKGIVVDIKSKLEKETCPKQ  420
            +G++L+D   L   D V++AVPH +Y+E+   ++  L+K+  GIV DIK+ ++ +     
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDC-GIVFDIKGIINSDELNVS  418

Query  421  IKLWRL  426
             +LWRL
Sbjct  419  QRLWRL  424

4) GM18_1428 in NC_014973


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  458 bits (1727),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 260/425 (62%), Positives = 337/425 (80%), Gaps = 2/425 (0%)

Query  5    DRIVSVVGLGYVGLPVAVAFGKIRKTVGFDINVTRVGELKAGFDRTGEVDAADLAQADIL  64
            +R ++VVGLGYVGLPVAV+FG+ +K +GFDIN +R+ ELK  +DRT EV    L +++I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  65   FTDAIADLAQADFHIVAVPTPVDSANQPDLTPMLKASETVAKALKKGDVVVYESTVYPGV  124
            +T    DL +ADF I+AVPTP+D  N+PDL P+LKASETV+K +  + +VVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  125  TEEECVPILERVSGLACGRDFTVGYSPERINPGDKEHTFTRIKKVVSGQDAATLDIVASV  184
            TEEECVP+LE+ SGL CG+DF VGYSPERINPGDK HTF  I KVVSGQ    L+IVA V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  185  YESVVTAGVHRAPSIMVAEAAKVIENTQRDLNIALMNELALIFDRMGIDTNAVLEAAGTK  244
            Y SVVTAGVH+A+SI VAEAAKVIENTQRD+NIALMNELA+IFD+++IDTN VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  245  WNFLRFQPGLVGGHCIGVDPYYLTHKAEKMGYIPQVILAGRRINDGMGKFIAQRTVKEMI  304
            WNFL F+PGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+K+IA   +KE++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  305  RTGHNVLGARVTVLGLTFKEDCPDLRNSKVIDIIHELQEYGLDVQVCDPLGDPDEARREY  364
            + G +V GA V VLGLTFKE+CPDLRN+KVI+II+EL+EYGL+V V D  +D +EA++ +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  365  GVTLIPAEKLQTCEAIVVAVAHKEYRSLSPDQLCGMMNGSPLVIDVKGIYDQKQLAEKNI  424
            G+ LI +  L+  + ++ AV+HK+Y   +  +   ++++  +V+D+KGI +  +L   + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  425  RLWRL  429
            RLWRL
Sbjct  420  RLWRL  424

5) GM18_1431 in NC_014973


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  456 bits (1719),  Expect = 9e-130, Method: Compositional matrix adjust.
 Identities = 261/425 (62%), Positives = 339/425 (80%), Gaps = 2/425 (0%)

Query  5    DRIVSVIGLGYVGLPVAVAFGKVRKTYGFDINTLRIEELKKGFDRTGEVLPSDLAETDIV  64
            +R ++V+GLGYVGLPVAV+FG+ +K  GFDIN  RI ELK+ +DRT EV  + L +T+I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  65   FTDSIEVLREADFHIVAVPTPVDSANQPDLTPMLRASETVGRALKPGDIVVYESTVYPGV  124
            +T + E L+ ADF I+AVPTP+D  N+PDL P+L+ASETVG+ + P+ IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  125  TEEECVPILERVSRLTCGKEFFVGYSPERINPGDKEHTFTKIKKVVSGQDQATLQIVGDV  184
            TEEECVP+LE+ S L CGK+FFVGYSPERINPGDK HTF  I KVVSGQ    L+IV+DV
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  185  YESVVTAGVHRAPSIMVAEAAKVIENTQRDLNIALMNELALIFDRMGIDTNSVLEAAGTK  244
            Y SVVTAGVH+A+SI VAEAAKVIENTQRD+NIALMNELA+IFD+++IDTN VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  245  WNFLKFQPGLVGGHCIGVDPYYLTHKAEKMGYIPQVILAGRRINDGMGKFIAQRTVKEMI  304
            WNFL+F+PGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+K+IA   +KE++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  305  RAGHNVLGARVTVLGLTFKEDCPDLRNSKVIDIIRELQDYGIDVQVCDPLADADEARHEY  364
            + G +V GA V VLGLTFKE+CPDLRN+KVI+II EL++YG++V V D  AD +EA+  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  365  GVTLTPADKLARCEAVVVAVAHKEYRSLSPDQLCGMMNGSPLVIDVKGVFNQQQLAEKKI  424
            G+ L  +  L   + V+ AV+HK+Y   +  +   ++++  +V+D+KG++N ++L   + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  425  RLWRL  429
            RLWRL
Sbjct  420  RLWRL  424

6) SYN_01113 in NC_007759


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  455 bits (1716),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 259/426 (61%), Positives = 336/426 (79%), Gaps = 2/426 (0%)

Query  3    MNRVVSVIGLGYVGLPVAVAFGKRKRTVGFDINSTRIAELRKGHDRTGEVTPEDLAAADI  62
            MNR ++V+GLGYVGLPVAV+FG++ + +GFDIN +RI EL++  DRT EVT + L  ++I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  63   LFTSDINELRQADFHIVAVPTPVDNANQPDLTPVLRASETAGKALKKGDIVVYESTVYPG  122
             +TS+ ++L++ADF I+AVPTP+D+ N+PDL P+L+ASET GK +  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  VTEEECVPILERVSGLTCGTDFTVGYSPERINPGDKEHTFTKIKKVVSGQDAETLEIVAS  182
             TEEECVP+LE+ SGL CG DF VGYSPERINPGDK HTF  I KVVSGQ  E LEIVA 
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  183  VYESVVTAGVHRAPTIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTGDVLEAAGT  242
            VY SVVTAGVH+A++IKVAEAAKVIENTQRD+NIALMNELA+IFD+L+IDT +VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNFLGFRPGLVGGHCIGVDPYYLTHKAEMIGYIPQVILAGRRINDSMGKYIAQQAVREM  302
            KWNFL F+PGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND+M+KYIA + ++E+
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  ILAGHNVLDARVTVLGLTFKEDCPDLRNSRVIDIIRELEGYGVQLQVSDPMADGEEARHE  362
            +  G +V +A V VLGLTFKE+CPDLRN++VI+II EL  YG+++ V+D  AD +EA+  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  363  YGVALTPLDRLLPASAVIVAVAHQAYRGMTPDQLAALTLGRPVVLDVKGIFDRQALADAG  422
            +G+ L     L     V+ AV+H+ Y      +   L  +  +V+D+KGI++ + L + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDEL-NVS  418

Query  423  IRLWRL  428
             RLWRL
Sbjct  419  QRLWRL  424

7) Sde_0619 in NC_007912


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  449 bits (1690),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 260/426 (62%), Positives = 344/426 (81%), Gaps = 4/426 (0%)

Query  3    NRKISVIGLGYVGLPVAVAFGKSQQTIGFDINQGRVEELQKGTDRTLEVTSEELAQTDIL  62
            NR+I+V+GLGYVGLPVAV+FG+ ++ IGFDIN++R+ EL++  DRT EVT + L +T+I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  63   FTCTPADLQKADFHIVAVPTPINDSKQPDLRPLIGASKTLGPQLKKGDIVVYESTVYPGA  122
            +T  + DL+KADF I+AVPTPI+  ++PDL PL+ AS T+G  +  + IVVYESTVYPGA
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  123  TEEDCVPVLEAESGLKCGVDFFVGYSPERINPGDKEHTFTKITKVVSGQTPEVLEIVAAV  182
            TEE+CVPVLE  SGL CG DFFVGYSPERINPGDK HTF  ITKVVSGQT EVLEIVA V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  183  YGSVVTAGVHKATSIKVAEAAKVIENTQRDLNIALMNELSVIFNRMDIDTIDVLEAAGTK  242
            Y+SVVTAGVHKA+SIKVAEAAKVIENTQRD+NIALMNEL++IF+++DIDT +VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  243  WNFLPFRPGLVGGHCIGVDPYYLTHKAERMGYNPEVILAGRRINDSMGAYVVQQVIRQLA  302
            WNFL F+PGLVGGHCIGVDPYYLTHKA+ +G +PEVILAGRRIND+M+ Y+  +VI++L 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  303  QADKPIKGAKVAVMGLTFKEDCPDLRNSRVIDVIKECQTWGIEPLVHDPMADPAEAQHEY  362
            + +  ++GA V V+GLTFKE+CPDLRN++VI++I E +  G++  V+D  AD  EA+  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  363  GVQLVGDDAIKNVDALIFTVAHKHYKQWSTEQIIARLAPE-GSVFDVKGMLNREAFAQAG  421
            G++L++   +K VD ++F+V+HK+Y +   + I   L  + G VFD+KG++N + + + +
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI--NLVKDCGIVFDIKGIINSDEL-NVS  418

Query  422  TTLWRM  427
              LWR+
Sbjct  419  QRLWRL  424

8) Ppro_2441 in NC_008609


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  445 bits (1676),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 253/425 (60%), Positives = 333/425 (79%), Gaps = 2/425 (0%)

Query  4    ERVISVVGLGYVGLPVAVAFGGVRRTIGFDVNRTRIDELKAGYDRTDEVSEEELRAARIV  63
            +R I+VVGLGYVGLPVAV+FG  ++ IGFD+N +RI ELK  YDRT+EV+E+ L+ + I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  64   FTDSVDDLRTADFHIVAVPTPVDEAHRPDLSLMHRASETVGQALKKGDIVVYESTVYPGV  123
            +T + +DL+ ADF I+AVPTP+D  ++PDL  + +ASETVG+ +  + IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  124  TEDECVPILERVSGLACGSDFTVGYSPERINPGDREHTFTRIKKVVSGQDDATLEIVARV  183
            TE+ECVP+LE+ SGL CG DF VGYSPERINPGD+ HTF  I KVVSGQ    LEIVA V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  184  YESVVTAGVHRARSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTNDVLEAAGTK  243
            Y SVVTAGVH+A SIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+IDTN+VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  244  WNFLKFKPGLVGGHCIGVDPYYLTHKSEKIGYIPQVILAGRRINDGMGRFVAQRAIREMI  303
            WNFL+FKPGLVGGHCIGVDPYYLTHK++ +G  P+VILAGRRIND M++++A   I+E++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  304  HCGHSIRDSRVTVLGLTFKEDCPDLRNSKVIDIIRELEDYGISVQVCDPLADLGEARHEY  363
              G  ++++ V VLGLTFKE+CPDLRN+KVI+II EL +YG++V V D  AD  EA+  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  364  GVNLVAVDDLKPACAVVVAVAHRPFLEWGTDEMLRRMGKNPVLVDVKGIYDQDAMSAAGI  423
            G++L+   +LK    V+ AV+H+ ++E    + +  +    ++ D+KGI + D ++ +  
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  424  RVWRL  428
            R+WRL
Sbjct  420  RLWRL  424

9) capL in NC_007517


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  441 bits (1660),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 265/426 (63%), Positives = 336/426 (79%), Gaps = 2/426 (0%)

Query  4    LNRTVSVVGLGYVGLPVAVAFGKVRKTVGFDINPVRIRELKEGHDRTGEVETEDLKAADI  63
            +NR ++VVGLGYVGLPVAV+FG+ +K +GFDIN  RI+ELK+  DRT EV  + LK ++I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  64   LFTDSIDELKQADFHIVAVPTPVDEANQPDLTLMLKASETVGKALEKGDIVVYESTVYPG  123
             +T + ++LK+ADF I+AVPTP+D  N+PDL  +LKASETVGK +  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  VTEDECVPVLERVSGLKSGSDFTVGYSPERINPGDKEHTFTKIKKVVAGQDAATLETVAQ  183
             TE+ECVPVLE+ SGL  G DF VGYSPERINPGDK HTF  I KVV+GQ    LE VA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYESVVTAGVHRAASIKVAEAAKVIENTQRDLNIALMNELAIIFGRLGIDTNDVLEAAGT  243
            VY SVVTAGVH+A+SIKVAEAAKVIENTQRD+NIALMNELAIIF++L+IDTN+VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLKFRPGLVGGHCIGVDPYYLTHKAEKIGYIPQVILAGRRINDGMGKYIAQQAVKGM  303
            KWNFL+F+PGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+KYIA + +K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  IHAGHCVRGCTVTVLGLTFKEDCPDLRNSKVIDIIRELEDYGVEVQVHDPLADAGEASHE  363
            +  G  V+G TV VLGLTFKE+CPDLRN+KVI+II EL +YG++V V+D  AD  EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YGVRLVPFGELRPaaavvaavaHRDYRELSVEGVKGLMGDGPVLVDVKGIYDPAAVRAAG  423
            +G+ L+   EL+    V+ AV+H+DY E   + ++ L+ D  ++ D+KGI ++  +  + 
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSDELNVSQ  419

Query  424  IRLWRL  429
             RLWRL
Sbjct  420  -RLWRL  424

10) Exig_2569 in NC_010556


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  439 bits (1653),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 263/425 (62%), Positives = 346/425 (82%), Gaps = 2/425 (0%)

Query  23   NRSIAVVGLGYVGLPVAVAFGEKTEVVGFDIKEQRVAELKEGIDATLELSPFVLKNADVE  82
            NR+IAVVGLGYVGLPVAV+FG+K  V+GFDI+E R+ ELK+  D T E++   LKN+++E
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  83   YVTDAAALGASDFIIIAVPTPINAQNQPDLTPLLRASQLVGRQLNKGDIVVYESTVYPGA  142
            Y ++A  L  +DFIIIAVPTPI+ +N+PDL PLL+AS+ VG+ +  + IVVYESTVYPGA
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  143  TEEDCIPVLEEASGLQAGVDFFVGYSPERINPGDHEHTFKTIKKIVSAQNQETLDIvaev  202
            TEE+C+PVLE  SGL  G DFFVGYSPERINPGD  HTF TI K+VS+Q  E L+IVA+V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  203  yeavveagvHRASSIKVAEAAKIIENTQRDLNIALMNELAIIFDRMNIDTLEVLEAAGTK  262
            Y +VV AGVH+ASSIKVAEAAK+IENTQRD+NIALMNELAIIFD+++IDT EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  263  WNFLPFRPGLVGGHCIGVDPFYLTMKAESLGYHPEVILAGRRINDTMGRFIATSLVKNLI  322
            WNFL F+PGLVGGHCIGVDP+YLT KA+ +G HPEVILAGRRIND M+++IA++++K+L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  323  KQNMPVLGARVTVLGLSFKENVSDIRNSKVANLVKEIEEFGIEVQVTDRLVEKGDAKREY  382
            KQ + V GA V VLGL+FKEN +D+RN+KV +++ E+ E+G++V V D   +K +AK+ +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  383  GIDLVDLADLKPADVVIFAVSHEEYVEGNWLLAQHLLKVGRGIVIDIKGMLTPSEKPEGV  442
            G+DL+D  +LK  DVV+FAV+H +Y+E +     +L+K + GIV+DIKG++ + E   + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVK-DCGIVFDIKGIINSDELNVSQ  419

Query  443  HLWRL  447
            +LWRL
Sbjct  420  RLWRL  424

11) Eab7_2409 in NC_018665


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  436 bits (1642),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 263/425 (62%), Positives = 347/425 (82%), Gaps = 2/425 (0%)

Query  23   NRSIAVVGLGYVGLPVAVAFGEKTEVIGFDIKEQRVAELKEGIDATLELSPFVLKNAEVE  82
            NR+IAVVGLGYVGLPVAV+FG+K  VIGFDI+E R+ ELK+  D T E++   LKN+++E
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  83   YVTDAGALQASDFIIIAVPTPINAQNQPDLTPLLRASHLVGRQLNKGDIVVYESTVYPGA  142
            Y ++A  L+ +DFIIIAVPTPI+ +N+PDL PLL+AS+ VG+ +  + IVVYESTVYPGA
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  143  TEEDCIPVLEEASGLQAGVDFFVGYSPERINPGDHEHTFKTIKKIVSAQNEETLDIvaev  202
            TEE+C+PVLE  SGL  G DFFVGYSPERINPGD  HTF TI K+VS+Q  E L+IVA+V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  203  yeavveagvHRASSIKVAEAAKIIENTQRDLNIALMNELAIIFDRMNIDTLEVLEAAGTK  262
            Y +VV AGVH+ASSIKVAEAAK+IENTQRD+NIALMNELAIIFD+++IDT EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  263  WNFLPFRPGLVGGHCIGVDPFYLTMKAESLGYHPEVILAGRRINDTMGRFIATSLVKNLI  322
            WNFL F+PGLVGGHCIGVDP+YLT KA+ +G HPEVILAGRRIND M+++IA++++K+L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  323  KQNMPVLGARVTVLGLSFKENVSDIRNSKVANLVKEIEEFGIEVQVADRLVAKEEAQREY  382
            KQ + V GA V VLGL+FKEN +D+RN+KV +++ E+ E+G++V V D    K+EA++ +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  383  GIDLVDLPDLKPADVVIFAVSHEEYVEGNWLLAQHLLKVGRGIVIDIKGMLTPADKPEGV  442
            G+DL+D  +LK  DVV+FAV+H +Y+E +     +L+K + GIV+DIKG++ + +   + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVK-DCGIVFDIKGIINSDELNVSQ  419

Query  443  HLWRL  447
            +LWRL
Sbjct  420  RLWRL  424

12) capL in NC_017454


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  436 bits (1643),  Expect = 8e-124, Method: Compositional matrix adjust.
 Identities = 262/425 (62%), Positives = 331/425 (78%), Gaps = 2/425 (0%)

Query  4    DRTISVIGLGYVGLPVAVAFGRVRRTVGFDINAGRIAELKQGIDRTGEVTAEALAAANIL  63
            +R I+V+GLGYVGLPVAV+FG  ++ +GFDIN +RI ELK+  DRT EVT + L  +NI 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  64   FTDRIEELRLADFHIVAVPTPIDEANQPDLTLMLKASETVGKALKQGDIVVYESTVYPGV  123
            +T   E+L+ ADF I+AVPTPID  N+PDL  +LKASETVGK +  + IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  124  TEDECVPILERVSGLRCGTDFTVGYSPERINPGDREHTFTKITKVVSGQDAATLDVVARV  183
            TE+ECVP+LE+ SGL CG DF VGYSPERINPGD+ HTF  ITKVVSGQ    L++VA V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  184  YESVVTAGVHRASSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTSEVLEAAGTK  243
            Y SVVTAGVH+ASSIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+IDT+EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  244  WNFLRFKPGLVGGHCIGVDPYYLTHKAEKIGYIPQVILAGRRINDGMGKFVAQKTVKEMI  303
            WNFL FKPGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+K++A + +KE++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  304  LAGHPVLGARVTVLGLTFKEDCPDLRNSRVIDIIRELEEYGVKVQVYDPLADPNEALHEY  363
              G  V GA V VLGLTFKE+CPDLRN++VI+II EL EYG++V V D  AD NEA   +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  364  GVTLVPADGLEPaaavvaavaHRQFRSLAGDDLLRLMGHPPVLMDVKGMYDQNMLRQAGI  423
            G+ L+ +  L     V+ AV+H+++      D + L+ +  ++ D+KG+ + + L + + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDEL-NVSQ  419

Query  424  RFWRL  428
            R+WRL
Sbjct  420  RLWRL  424

13) capL in NC_002939


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  436 bits (1643),  Expect = 8e-124, Method: Compositional matrix adjust.
 Identities = 262/425 (62%), Positives = 331/425 (78%), Gaps = 2/425 (0%)

Query  4    DRTISVIGLGYVGLPVAVAFGRVRRTVGFDINAGRIAELKQGIDRTGEVTAEALAAANIL  63
            +R I+V+GLGYVGLPVAV+FG  ++ +GFDIN +RI ELK+  DRT EVT + L  +NI 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  64   FTDRIEELRLADFHIVAVPTPIDEANQPDLTLMLKASETVGKALKQGDIVVYESTVYPGV  123
            +T   E+L+ ADF I+AVPTPID  N+PDL  +LKASETVGK +  + IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  124  TEDECVPILERVSGLRCGTDFTVGYSPERINPGDREHTFTKITKVVSGQDAATLDVVARV  183
            TE+ECVP+LE+ SGL CG DF VGYSPERINPGD+ HTF  ITKVVSGQ    L++VA V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  184  YESVVTAGVHRASSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTSEVLEAAGTK  243
            Y SVVTAGVH+ASSIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+IDT+EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  244  WNFLRFKPGLVGGHCIGVDPYYLTHKAEKIGYIPQVILAGRRINDGMGKFVAQKTVKEMI  303
            WNFL FKPGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+K++A + +KE++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  304  LAGHPVLGARVTVLGLTFKEDCPDLRNSRVIDIIRELEEYGVKVQVYDPLADPNEALHEY  363
              G  V GA V VLGLTFKE+CPDLRN++VI+II EL EYG++V V D  AD NEA   +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  364  GVTLVPADGLEPaaavvaavaHRQFRSLAGDDLLRLMGHPPVLMDVKGMYDQNMLRQAGI  423
            G+ L+ +  L     V+ AV+H+++      D + L+ +  ++ D+KG+ + + L + + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDEL-NVSQ  419

Query  424  RFWRL  428
            R+WRL
Sbjct  420  RLWRL  424

14) Hneap_0232 in NC_013422


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  432 bits (1626),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 245/415 (60%), Positives = 332/415 (80%), Gaps = 2/415 (0%)

Query  11   IAVIGLGYVGLPLAVEFGKIRPVIGFDVDATRIDQLKSGHDRTREVEPDELQNARHLSYT  70
            IAV+GLGYVGLP+AV FG+ + VIGFD++ +RI +LK+  DRT EV  + L+N+ ++ YT
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEYT  63

Query  71   VDPADLRKASLFIVTVPTPIDAHKRPDLSPLIKASETVGRALKRGDIVIYESTVYPGATE  130
             ++ DL+KA ++I++VPTPID H++PDL PL+KASETVG+ +  + IV+YESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  131  EDCVPVLEQYSGLRFNHDFYCGYSPERINPGDKTHRLPAIKKVTAGSTPAVAEAVDALYR  190
            E+CVPVLE+YSGL    DF+ GYSPERINPGDK H + +I KV +G T  V E V  +Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  191  QIITAGTHPAPSIRVAEAAKVIENTQRDVNIALINELAILFGKLGLDTQAVLEAAGSKWN  250
             ++TAG H A+SI+VAEAAKVIENTQRDVNIAL+NELAI+F+KL++DT+ VL A+G+KWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  251  FLPFRPGLVGGHCIGVDPYYLTHKAQQVGHHPEMILAGRRINDGMGAYVAGQLIKAMLKK  310
            FL F+PGLVGGHCIGVDPYYLTHKAQ+VGHHPE+ILAGRRIND M+ Y+A+++IK +LK+
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  311  GITVQGARVLVLGLTFKENCPDLRNTRVIDVITELKDYGLTVDVHDPWADAACARHEYGL  370
            G+ VQGA V VLGLTFKENCPDLRNT+VI++I ELK+YGL V V+D  AD   A+  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  371  ELTATPPSNTYEAIVLAVAHREFRTLGAPAIHALGKEQHVLYDLKHLFHADEADI  425
            +L  T   +  + +++AV+H+++       I+ L K+  +++D+K ++++DE ++
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSDELNV  417

15) NIDE2831 in NC_014355


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  431 bits (1624),  Expect = 3e-122, Method: Compositional matrix adjust.
 Identities = 253/427 (60%), Positives = 338/427 (80%), Gaps = 3/427 (0%)

Query  5    MQRQIAVVGLGYVGLPIAVAFGKSAPVIGFDINRAKVDELRKGIDRTGEVSSKDLKASRV  64
            M+R+IAVVGLGYVGLP+AV+FG+   VIGFDIN +++ EL++  DRT EV+ + LK + +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  65   RYTSEPSDLKAADFIIVAVPTPINEALQPDLTALKKASELIGSNLSPGAIVVYESTVYPG  124
             YTS++ DLK ADFII+AVPTPI+   +PDL +L KASE +G  ++P++IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  ATEEDCLPILEKASGMKSGIDFKIGYSPERINPGDKEHTLERIIKVVSAQDEESLEIVAQ  184
            ATEE+C+P+LEK SG+  G DF +GYSPERINPGDK HT+E I KVVS+Q  E LEIVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  TYAMVVKAGIHRASSIKVAEAAKVIENTQRDLNIALMNELALIFHRLGIDTRSVLEAAGT  244
             Y+ VV AG+H+ASSIKVAEAAKVIENTQRD+NIALMNELA+IF++L+IDT  VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLKFSPGLVGGHCIGVDPYYLTAKAESVGYHPEVILAGRRINNSMGKYVAEQTVKLL  304
            KWNFL+F PGLVGGHCIGVDPYYLT KA+ VG HPEVILAGRRIN++M+KY+A + +K L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  SQVERPVSDLRVGVLGLTFKENVPDLRNSRVPDIVNELKEYGIQVVVHDPLAEPEEAVGE  364
             +    V +  V VLGLTFKEN PDLRN++V +I++ELKEYG++V V+D  A+ +EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGLRLSPWDQLKQLDGIVLAVAHREYMQMSVSELLKPLRKQRNNVVVDVKSVLSPDSLPG  424
            +GL L    +LK +D +++AV+H++YM+    + ++ ++     +V D+K+++++D L  
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKD--CGIVFDIKGIINSDELNV  417

Query  425  SVKYWRL  431
            S + WRL
Sbjct  418  SQRLWRL  424

16) CbuK_0713 in NC_011528


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  422 bits (1589),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 250/426 (59%), Positives = 336/426 (79%), Gaps = 2/426 (0%)

Query  4    VARKIAVIGLGYVGLPVAVAFSRLQPVIAYDKNSARIRALKQGYDACGEVDSQQLRTCQI  63
            + R+IAV+GLGYVGLPVAV+F+  + VI++D N +RI+ LK+ YD   EV  ++L+  +I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  64   DFTDDPDDLAKADFYIVAVPTPIDQSKHPDLSLLLNASETIGRYLKRGDIVVFESTVYPG  123
            ++T +++DL KADF I+AVPTPID+ + PDL  LL+ASET+G+ +  + IVV+ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  VTEEECAPVLEKASGLKYGVDFTLGYSPERINPSDKTHRFETITKIVSGSDPETLDIVAH  183
             TEEEC PVLEK SGL  G DF +GYSPERINP+DK H FETITK+VSG   E L+IVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYGSVITAGIYRAPSIRTAEAAKVIENTQRDLNIALMNELAIIFKRMDIDTQEVLAAAGT  243
            VY+SV+TAG+ +A+SI+ AEAAKVIENTQRD+NIALMNELAIIF ++DIDT+EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLPFKPGLVGGHCIGVDPYYLTYQAQRYGYNPQVILAGRRINDTMGKYIAEQTIKQM  303
            KWNFL FKPGLVGGHCIGVDPYYLT +AQ  G +P+VILAGRRIND M+KYIA + IK++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  IHAGYTIKGAKVAVLGLTFKENCPDLRNSKVIDIIEELNDYGIECVVHDPLADPEVAKQL  363
            +  G  ++GA V VLGLTFKENCPDLRN+KVI+IIEEL++YG++  V+D  AD + AK++
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YNIDLKSWDEIHDVDSFVLAVAHDQFHQYSLEDYHAKLAHHSIIVDVKNVLNPQDCKSNG  423
            + +DL    E+  VD  ++AV+H ++ +    DY   + + +I+ D+K ++N+++  + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDE-LNVS  418

Query  424  ITLWRL  429
              LWRL
Sbjct  419  QRLWRL  424

17) CBUD_0910 in NC_009727


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  422 bits (1589),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 250/426 (59%), Positives = 336/426 (79%), Gaps = 2/426 (0%)

Query  4    VARKIAVIGLGYVGLPVAVAFSRLQPVIAYDKNSARIRALKQGYDACGEVDSQQLRTCQI  63
            + R+IAV+GLGYVGLPVAV+F+  + VI++D N +RI+ LK+ YD   EV  ++L+  +I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  64   DFTDDPDDLAKADFYIVAVPTPIDQSKHPDLSLLLNASETIGRYLKRGDIVVFESTVYPG  123
            ++T +++DL KADF I+AVPTPID+ + PDL  LL+ASET+G+ +  + IVV+ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  VTEEECAPVLEKASGLKYGVDFTLGYSPERINPSDKTHRFETITKIVSGSDPETLDIVAH  183
             TEEEC PVLEK SGL  G DF +GYSPERINP+DK H FETITK+VSG   E L+IVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYGSVITAGIYRAPSIRTAEAAKVIENTQRDLNIALMNELAIIFKRMDIDTQEVLAAAGT  243
            VY+SV+TAG+ +A+SI+ AEAAKVIENTQRD+NIALMNELAIIF ++DIDT+EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLPFKPGLVGGHCIGVDPYYLTYQAQRYGYNPQVILAGRRINDTMGKYIAEQTIKQM  303
            KWNFL FKPGLVGGHCIGVDPYYLT +AQ  G +P+VILAGRRIND M+KYIA + IK++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  IHAGYTIKGAKVAVLGLTFKENCPDLRNSKVIDIIEELNDYGIECVVHDPLADPEVAKQL  363
            +  G  ++GA V VLGLTFKENCPDLRN+KVI+IIEEL++YG++  V+D  AD + AK++
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YNIDLKSWDEIHDVDSFVLAVAHDQFHQYSLEDYHAKLAHHSIIVDVKNVLNPQDCKSNG  423
            + +DL    E+  VD  ++AV+H ++ +    DY   + + +I+ D+K ++N+++  + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDE-LNVS  418

Query  424  ITLWRL  429
              LWRL
Sbjct  419  QRLWRL  424

18) COXBURSA331_A1105 in NC_010117


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  422 bits (1589),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 250/426 (59%), Positives = 336/426 (79%), Gaps = 2/426 (0%)

Query  4    VARKIAVIGLGYVGLPVAVAFSRLQPVIAYDKNSARIRALKQGYDACGEVDSQQLRTCQI  63
            + R+IAV+GLGYVGLPVAV+F+  + VI++D N +RI+ LK+ YD   EV  ++L+  +I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  64   DFTDDPDDLAKADFYIVAVPTPIDQSKHPDLSLLLNASETIGRYLKRGDIVVFESTVYPG  123
            ++T +++DL KADF I+AVPTPID+ + PDL  LL+ASET+G+ +  + IVV+ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  VTEEECAPVLEKASGLKYGVDFTLGYSPERINPSDKTHRFETITKIVSGSHPETLDIVAH  183
             TEEEC PVLEK SGL  G DF +GYSPERINP+DK H FETITK+VSG   E L+IVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYGSVITAGIYRAPSIRTAEAAKVIENTQRDLNIALMNELAIIFKRMDIDTQEVLAAAGT  243
            VY+SV+TAG+ +A+SI+ AEAAKVIENTQRD+NIALMNELAIIF ++DIDT+EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLPFKPGLVGGHCIGVDPYYLTYQAQRYGYNPQVILAGRRINDTMGKYIAEQTIKQM  303
            KWNFL FKPGLVGGHCIGVDPYYLT +AQ  G +P+VILAGRRIND M+KYIA + IK++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  IHAGYTIKGAKVAVLGLTFKENCPDLRNSKVIDIIEELNDYGIECVVHDPLADPEVAKQL  363
            +  G  ++GA V VLGLTFKENCPDLRN+KVI+IIEEL++YG++  V+D  AD + AK++
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YNIDLKSWDEIHDVDSFVLAVAHDQFHQYSLEDYHAKLAHHSIIVDVKNVLNPQDCKSNG  423
            + +DL    E+  VD  ++AV+H ++ +    DY   + + +I+ D+K ++N+++  + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDE-LNVS  418

Query  424  ITLWRL  429
              LWRL
Sbjct  419  QRLWRL  424

19) CBU_0845 in NC_002971


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  422 bits (1589),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 250/426 (59%), Positives = 336/426 (79%), Gaps = 2/426 (0%)

Query  4    VARKIAVIGLGYVGLPVAVAFSRLQPVIAYDKNSARIRALKQGYDACGEVDSQQLRTCQI  63
            + R+IAV+GLGYVGLPVAV+F+  + VI++D N +RI+ LK+ YD   EV  ++L+  +I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  64   DFTDDPDDLAKADFYIVAVPTPIDQSKHPDLSLLLNASETIGRYLKRGDIVVFESTVYPG  123
            ++T +++DL KADF I+AVPTPID+ + PDL  LL+ASET+G+ +  + IVV+ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  VTEEECAPVLEKASGLKYGVDFTLGYSPERINPSDKTHRFETITKIVSGSDPETLDIVAH  183
             TEEEC PVLEK SGL  G DF +GYSPERINP+DK H FETITK+VSG   E L+IVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYGSVITAGIYRAPSIRTAEAAKVIENTQRDLNIALMNELAIIFKRMDIDTQEVLAAAGT  243
            VY+SV+TAG+ +A+SI+ AEAAKVIENTQRD+NIALMNELAIIF ++DIDT+EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLPFKPGLVGGHCIGVDPYYLTYQAQRYGYNPQVILAGRRINDTMGKYIAEQTIKQM  303
            KWNFL FKPGLVGGHCIGVDPYYLT +AQ  G +P+VILAGRRIND M+KYIA + IK++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  IHAGYTIKGAKVAVLGLTFKENCPDLRNSKVIDIIEELNDYGIECVVHDPLADPEVAKQL  363
            +  G  ++GA V VLGLTFKENCPDLRN+KVI+IIEEL++YG++  V+D  AD + AK++
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YNIDLKSWDEIHDVDSFVLAVAHDQFHQYSLEDYHAKLAHHSIIVDVKNVLNPQDCKSNG  423
            + +DL    E+  VD  ++AV+H ++ +    DY   + + +I+ D+K ++N+++  + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDE-LNVS  418

Query  424  ITLWRL  429
              LWRL
Sbjct  419  QRLWRL  424

20) CbuG_1156 in NC_011527


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  421 bits (1585),  Expect = 3e-119, Method: Compositional matrix adjust.
 Identities = 250/426 (59%), Positives = 335/426 (79%), Gaps = 2/426 (0%)

Query  4    VARKIAVIGLGYVGLPVAVAFSRLQPVIAYDKNSARIRALKQGYDACGEVDSQQLRTCQI  63
            + R+IAV+GLGYVGLPVAV+F+  + VI++D N +RI+ LK+ YD   EV  ++L+  +I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  64   DFTDDPDDLAKADFYIVAVPTPIDQSKHPDLSLLLNASETIGRYLKRGDIVVFESTVYPG  123
            ++T +++DL KADF I+AVPTPID+ + PDL  LL+ASET+G+ +  + IVV+ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  VTEEECAPVLEKASGLKYGVDFTLGYSPERINPSDKTHRFETITKIVSGSDPETLDIVAH  183
             TEEEC PVLEK SGL  G DF +GYSPERINP+DK H FETITK+VSG   E L+IVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYGSVITAGIYRAPSIRTAEAAKVIENTQRDLNIALMNELAIIFKRMDIDTQEVLAAAGT  243
            VY+SV+TAG+ +A+SI+ AEAAKVIENTQRD+NIALMNELAIIF ++DIDT+EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLPFKPGLVGGHCIGVDPYYLTYQAQRYGYNPQVILAGRRINDTMGKYIAEQTIKKM  303
            KWNFL FKPGLVGGHCIGVDPYYLT +AQ  G +P+VILAGRRIND M+KYIA + IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  IHAGYTIKGAKVAVLGLTFKENCPDLRNSKVIDIIEELNDYGIECVVHDPLADPEVAKQL  363
            +  G  ++GA V VLGLTFKENCPDLRN+KVI+IIEEL++YG++  V+D  AD + AK++
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YNIDLKSWDEIHDVDSFVLAVAHDQFHQYSLEDYHAKLAHHSIIVDVKNVLNPQDCKSNG  423
            + +DL    E+  VD  ++AV+H ++ +    DY   + + +I+ D+K ++N+++  + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDE-LNVS  418

Query  424  ITLWRL  429
              LWRL
Sbjct  419  QRLWRL  424

21) BMS_0344 in NC_016620


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  421 bits (1584),  Expect = 4e-119, Method: Compositional matrix adjust.
 Identities = 236/426 (56%), Positives = 343/426 (81%), Gaps = 2/426 (0%)

Query  1    MMRKVSVIGLGYVGFPVAVAFSRFGQVIGFDINETRLKELRAGFDSTKELTSKELESLNI  60
            M R+++V+GLGYVG+PVAV+F+   +VIGFDINE+R+KEL+  +D T+E+T + L + NI
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  61   KYTSDVNEISEANFHIIAVPTPVNKAKQPDLSPLISASNLVGGVLKAGDIVVYESTVYPG  120
             YTS+ +++  A+F IIAVPTP++K ++PDL PL+ AS+ VG V+ ++ IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  121  ATEEDCIPVLEKASGLKAGHDFKVGYSPERINPGDKKHTLESIVKVVSAQDRDSLKVLSE  180
            ATEE+C+PVLEK SGL  G DF VGYSPERINPGDK HT+E+I KVVS+Q  + L ++++
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  181  MYSKVVSAGVYEASSIKVAEAAKVIENSQRDINIAFVNELAIIFEKMGINTLDVLEAAGT  240
            +YS VV+AGV  ASSIKVAEAAKVIEN+QRD+NIA++NELAIIF+K++I+T +VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  241  KWNFLNFRPGLVGGHCIGVDPYYLTHKAEQLGLHPEIILSGRRINDSVGKFVAEKVVKQL  300
            KWNFLNF+PGLVGGHCIGVDPYYLTHKA+++G HPE+IL+GRRIND+++K++A +V+K+L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  301  IHAGVPIKNSLVTILGLTFKEDCPDLRNTRVVDIIDELRDYGVKIQVHDPECYVDEAFRL  360
            +  G+ ++ + V +LGLTFKE+CPDLRNT+V++II+EL++YG+++ V+D E   +EA ++
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  361  YKTPVVSKEQLSESNALIVAVAHSEYTKWQRLDIEKLAGNSGIILDLKGVWRNSTISTSF  420
            +   ++   +L   + ++ AV+H +Y   ++ D  +L  + GI++D+KG+  +  ++ S 
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKK-DYINLVKDCGIVFDIKGIINSDELNVS-  418

Query  421  ENYWNL  426
            +  W L
Sbjct  419  QRLWRL  424

22) NH8B_3694 in NC_016002


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  417 bits (1570),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 252/425 (60%), Positives = 334/425 (79%), Gaps = 2/425 (0%)

Query  3    DRKVSVVGLGYVGLPVAVAFGQKSRVIGFDINLQRLTELRGGHDRTlevadaelaaadiv  62
            +R+++VVGLGYVGLPVAV+FG+K +VIGFDIN  R+ EL+   DRT EV++  L  ++I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  63   YTDDIAVLAEADFHIVAVPTPVDDAHQPDLTPVEKASESVAKALRPGAIVVYESTVYPGV  122
            YT +   L  ADF I+AVPTP+D  ++PDL P+ KASE+V+K + P++IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  123  TEEVCVPILERVSGLKCGVDFTVGYSPERINPGDKEHTFTKIKKVVSGQDAATLEIVADV  182
            TEE CVP+LE+ SGL CG DF VGYSPERINPGDK HTF  I KVVSGQ    LEIVADV
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  183  YGSVVTAGVHKASSIKVAEASKVIENTQRDLNIALMNELAVLFEKMGIDTLDVLEAAGTK  242
            Y+SVVTAGVHKASSIKVAEA+KVIENTQRD+NIALMNELA++F+K++IDT +VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  243  WNFLPFRPGLVGGHCIGVDPYYLTYKAEQLGYIPQVIHAGRRINNGMGTFIAQRTIKEMI  302
            WNFL F+PGLVGGHCIGVDPYYLT KA+++G  P+VI AGRRIN+ M+ +IA   IKE++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  303  HAGINILGSTVTVLGLTFKENCPDLRNSRVIDVVTELREFGvqvqvadpqadaaqaHHEY  362
              G+++ G+TV VLGLTFKENCPDLRN++VI+++ EL+E+G++V V D +AD  +A   +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  363  GVDLVPMAQLVPADAVIVAVAHHEFAEFSAADWLSQCRGVPVIIDVKGKLDKAALAEAGA  422
            G+DL+   +L   D V+ AV+H ++ E +  D ++  ++  +++D+KG ++   L + + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDEL-NVSQ  419

Query  423  RYWRL  427
            R WRL
Sbjct  420  RLWRL  424

23) GM18_1618 in NC_014973


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  417 bits (1569),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 247/425 (59%), Positives = 323/425 (76%), Gaps = 2/425 (0%)

Query  4    GRKISVVGLGYVGLPVAVAFGKVRRTIGFDISARRIEELRAGCDRTGEVSTEELVGADIC  63
             R+I+VVGLGYVGLPVAV+FG+ ++ IGFDI+  RI EL+   DRT EV+ + L  ++I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  64   YTDRIEVLREADFHVVAVPTPVDPANQPDLSLLTGASETVGKALKKGDIVVYESTVYPGV  123
            YT   E L+ ADF ++AVPTP+D  N+PDL  L  ASETVGK +  + IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  124  TEEICLPILERVSGLKSPEGFTVGYSPERINPGDKEHTFTSILKVVSGQDARTLEVVASV  183
            TEE C+P+LE+ SGL    +F VGYSPERINPGDK HTF +I KVVSGQ    LE+VA V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  184  YSQVVMPGVHRAPSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTGEVLAAAASK  243
            YS VV +GVH+A+SIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+IDT EVL A+++K
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  244  WNFLNFKPGLVGGHCIGVDPYYLTYQAEKIGYIPQVILAGRRINDGMGKFVAQRAVKEII  303
            WNFLNFKPGLVGGHCIGVDPYYLT +A+ +G  P+VILAGRRIND M+K++A   +KE++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  304  RAGHHVLGSYVTVLGLTFKENCPDLRNSKVVDILDELGDYGLRIQVCDPMADPQEAKSAY  363
            + G +V G+ V VLGLTFKENCPDLRN+KV++I++EL +YGL + V D  AD +EAK  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  364  GVTLRHPDRLQPAVAVIVAVAHESYRQWSPAKFASLMVENPVLIDVKGIYDSRRMAAAGI  423
            G+ L +   L+    V+ AV+H  Y + +   + +L+ +  +++D+KGI +S  +  +  
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  424  RVWCL  428
            R+W L
Sbjct  420  RLWRL  424

24) gna in NC_012962


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  417 bits (1568),  Expect = 7e-118, Method: Compositional matrix adjust.
 Identities = 247/425 (59%), Positives = 335/425 (79%), Gaps = 5/425 (1%)

Query  2    KIAVVGLGYVGLPLAVAFGKQFDTIGFDLSKNKVSAYKNHYDPTGEVSTKELKAATRITY  61
            +IAVVGLGYVGLP+AV+FG++   IGFD++ +++   KN+YD T EV+ + LK  T I Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  62   HTDPSSLKEADFIIVAVPTPVDEAHRPDFTPLIKSSETVGKYMKKGAIVVYESTVYPGAT  121
             +++  LK ADFII+AVPTP+D  ++PD+ PL+K+SETVGK +  ++IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  122  EEICIPVLEKFSNLKWKKDFYIGYSPERINPGDKEHTVTKIIKVVSGDTPETLEVVKNTY  181
            EE C+PVLEK+S L   KDF++GYSPERINPGDK HT   I KVVSG+T E LE+V + Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  182  AAVITAGVYPASSIKVAEAAKVIENTQRDLNIALMNELAMIFELVGIDTLEVLEAAGTKW  241
            ++V+TAGV  ASSIKVAEAAKVIENTQRD+NIALMNELA+IF+ ++IDT EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  242  NFLPFRPGLVGGHCIGVDPYYLTNKAEMLGYHPQVILAGRRINDGIGKYIAEQVVKNLIA  301
            NFL F+PGLVGGHCIGVDPYYLT+KA+ +G HP+VILAGRRIND ++KYIA +V+K+L+ 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  302  ASIPIKGSNVAILGLTFKENCPDLRNSKVIDVIHELEAYGINVLVHDPLADNSEAQREYN  361
             ++ ++G+ V +LGLTFKENCPDLRN+KVI++I+EL  YG+NV V+D  AD++EA++ + 
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  362  ISLTKWDDLPEVHAIIATVNHNNYRKMGLNTLLSKLTKG-GIFADVKSTWPVEEIKARGA  420
            + L    +L  V+ ++ +V H++Y  M  +    +L K+ GI  D+K+    +E++  + 
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY--MENKKDYINLVKDCGIVFDIKGIINSDELNV-SQ  419

Query  421  HLWRL  425
            +LWRL
Sbjct  420  RLWRL  424

25) Ddes_1910 in NC_011883


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  413 bits (1553),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 247/425 (59%), Positives = 333/425 (79%), Gaps = 4/425 (0%)

Query  13   TLAVVGLGYVGLPLAVALSRQMSVLGFDISAPRIKELQDGHDRTREVDDHRLQAANVRYS  72
             +AVVGLGYVGLP+AV+++ +  V+GFDI+ +RIKEL++  DRT EV +++L+ +N+ Y+
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDPADLREAAVIIVAVPTPIDDHRSPDLTPVVGASTTVGRHMGKGCVVVYESTVYPGLTE  132
             ++ DL+ A  II+AVPTPID H  PDL P++ AS TVG+ +  + +VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EICVPILERESGLTFGRDFTVGYSPERINPGDKVHTLETITKVVSGSDDATTDLLVQVYG  192
            E CVP+LE+ SGL  G+DF VGYSPERINPGDKVHT+ETITKVVSG      +++ +VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  SVVTAGIHRASSIKVAEAAKVIENTQRDLNIALMNELAIIFGRLGIDTLEVLQAAGSKWN  252
            SVVTAG+H+ASSIKVAEAAKVIENTQRD+NIALMNELAIIF++L+IDT EVL+A+G+KWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLPFRPGLVGGHCIGVDPYYLTYKAEELGFHPEVILAGRRINDNMGKYLAECTVKRLIKS  312
            FL F+PGLVGGHCIGVDPYYLT KA+E+G HPEVILAGRRINDNM+KY+A   +K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GRVISGARVGILGFTFKENVPDLRNTRVVDVIRELEDYGVQVLVSDAEADPAEALHEYGQ  372
            G  + GA V +LG+TFKEN PDLRNT+V+++I EL +YG++V V+D EAD  EA   +G 
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ALLPQSDLRDLDALILAVGHDAYKVLSPDAIKSLFAQPDKAVVLDVKSFLDPAAMRSAGI  432
             L+   +L+ +D +++AV H  Y     D I+ +    D ++V+D+K+++++  + + + 
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKDYINLV---KDCGIVFDIKGIINSDEL-NVSQ  419

Query  433  DYWRL  437
              WRL
Sbjct  420  RLWRL  424

26) wbpO in NC_008260


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  413 bits (1555),  Expect = 8e-117, Method: Compositional matrix adjust.
 Identities = 234/416 (57%), Positives = 332/416 (80%), Gaps = 2/416 (0%)

Query  7    KLAVIGLGYVGLPLAVEFGKRRSVIGFDINKPRIDALNDGHDATLEVDDEELASANQLTF  66
            ++AV+GLGYVGLP+AV FG+++ VIGFDIN +RI  L++  D T EV ++ L ++N + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  67   SADPASLRDCNVYIVTVPTPIDEHKRPDLTPLVKASETIGKTLKKGDIVIYESTVYPGAT  126
            ++++  L+  +  I++VPTPID H++PDL PL+KASET+GK +  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLEKVSGLVFNKDFFAGYSPERINPGDKEHRVTTITKVTSGSTPEVAELVDQIY  186
            EE+CVPVLEK SGLV  KDFF GYSPERINPGDK H   TITKV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  ASIITAGTHKASSIKVAEAAKVIENTQRDLNIALVNELSMIFNRMGVDTEEVLQAAGTKW  246
            +S++TAG HKASSIKVAEAAKVIENTQRD+NIAL+NEL++IF+++++DT+EVL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEVILAGRRINDAMGRHVASELVKAMLT  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPEVILAGRRIND M++ +AS+++K +L 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  RSIQVNGSRVLVMGLTFKENCPDLRNTRVVDVVKELQDYNIQVDVHDPWINAAESQHEYG  366
            ++++V+G+ V V+GLTFKENCPDLRNT+V++++ EL++Y ++V V+D   +  E++  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVATPEMEAYDAILLAVGHNQFKAMGSQAIRGFGKPEHILYDLKYSLPKEEVDL  422
            +  + T E+   D +L+AV H+++     + I  + K   I++D+K  +  +E+++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

27) MmarC5_1312 in NC_009135


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  412 bits (1552),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 245/429 (58%), Positives = 343/429 (80%), Gaps = 6/429 (1%)

Query  9    QKKISITGLGYVGLPLAVAFAEKGINVIGFDVNSEKIKKYLEGIDLTNEVGNEKLSNLKN  68
            +++I++ GLGYVGLP+AV+F++K  +VIGFD+N  +IK   +  D TNEV ++KL N  N
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKN-TN  59

Query  69   IKFTSNESDLKDAKFHIVAVPTPVGKNNIPNLTPIEGASTILGRNLTKGSIVVYESTVYP  128
            I +TSN  DLK A F I+AVPTP++K+N P+L P+  AS  +G+ +T ++IVVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  129  GVTEEICVPILEKESGLICGRDFKVGYSPERINPGDRKNTLETIVKIVAGQDEDCLNVVA  188
            G TEE CVP+LEK SGL+CG+DF VGYSPERINPGD+ +T+ETI K+V+GQ  + L++VA
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  189  DVYRSIIDAGVHRATSIKVAEAAKVIENAQRDVNIAFVNELSMIFDKMGIDTKEVLEAAG  248
            DVY S++ AGVH+A+SIKVAEAAKVIEN+QRDVNIA++NEL++IFDK++IDT+EVL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  249  TKWNFLNFQPGLVGGHCIGVDPYYLTYKSEEVGHTSQLILSGRRINDRMSKFIAEKTVKK  308
            TKWNFLNF+PGLVGGHCIGVDPYYLT K++EVGH +++IL+GRRIND M+K+IA + +K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  309  MIESGVRIKGAKVLVLGLTFKENVPDLRNSKVADLIHELNEYGLEILVVDPLADFEEAKR  368
            ++  G+ ++GA V VLGLTFKEN PDLRN+KV ++I+EL+EYGL++ V D  AD +EAK+
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  369  EYSIELTNLDDVTNVDAIIFAVPHKEYLKINIDKMNEFYTGGIDNPVFIDIKGVFDKKEV  428
             ++++L +  ++  VD ++FAVPHK+Y+    ++ +++     D  + +DIKG+++  E+
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYM----ENKKDYINLVKDCGIVFDIKGIINSDEL  415

Query  429  NGKFNYWRL  437
            N     WRL
Sbjct  416  NVSQRLWRL  424

28) capL-1 in NC_011146


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  411 bits (1548),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 251/425 (60%), Positives = 325/425 (77%), Gaps = 2/425 (0%)

Query  4    NRKISVVGLGYVGLPVAVAFGRVQRTIGFDISAKRIEELRSGWDRTGEVSSEDLVGADIC  63
            NR+I+VVGLGYVGLPVAV+FG  ++ IGFDI+  RI EL++  DRT EV+ + L  ++I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  64   FTDNIDELARADFHVVAVPTPVDPANQPDLSLLRSASETVGRALKKGDIVVYESTVYPGV  123
            +T N ++L +ADF ++AVPTP+D  N+PDL  L  ASETVG+ +  + IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  124  TEEVCLPILESVSGLKSPVDFTVGYSPERINPGDKEHTFTSILKVVSGQDQHTLEQVAAV  183
            TEE C+P+LE  SGL    DF VGYSPERINPGDK HTF +I KVVSGQ  + LE VA V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  184  YSSVVKPGVHRAPSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTSEVLAAAGSK  243
            YSSVV +GVH+A+SIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+IDT+EVL A+G+K
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  244  WNFLNFKPGLVGGHCIGVDPYYLTYQAEKIGYIPQVILAGRRINDGMGKFIAQRAVKEII  303
            WNFLNFKPGLVGGHCIGVDPYYLT +A+ +G  P+VILAGRRIND M+K+IA   +KE++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  304  RAGHHVLGSYVTVLGLTFKENCPDLRNSKVVDILTELSDYGLKVQVCDPIADPVEAQQAY  363
            + G +V G+ V VLGLTFKENCPDLRN+KV++I+ EL +YGL+V V D  AD  EA++ +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  364  GVTLKEPGKLHPavaviaavaHDSYRAWGAAKFASLMVENPVLIDVKGIYNSRAMSAAGI  423
            G+ L +   L     V+ AV+H  Y       + +L+ +  +++D+KGI NS  ++ +  
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  424  RVWCL  428
            R+W L
Sbjct  420  RLWRL  424

29) Dbac_3008 in NC_013173


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  411 bits (1548),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 246/424 (59%), Positives = 333/424 (79%), Gaps = 3/424 (0%)

Query  13   EVAVVGLGYVGLPLAVALGDHFKVIGFDISRPRIEELREGKDSTREVAPERLAGARVEYT  72
            ++AVVGLGYVGLP+AV++G+  KVIGFDI+ +RI EL++  D T EV+ ++L  + +EYT
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   DDPARLAGAGVIVVAVPTPIDGNRKPDLRPVVGATATVGAHMRAGCIVVYESTVYPGLTE  132
             ++  L  A+ I++AVPTPID + KPDL P++ A+ TVG  + ++ IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EICVPLLEEKSGLTCGRDFTVGYSPERINPGDKVHTLESIVKVVAGQDQTTADLLARFYA  192
            E CVP+LE  SGL CG+DF VGYSPERINPGDKVHT+E+I KVV+GQ     +++A  Y+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  SIVRAGVHRASSIKVAEAAKVIENTQRDLNIALMNELALIFDRMGIDTNEVLEAAGTKWN  252
            S+V AGVH+ASSIKVAEAAKVIENTQRD+NIALMNELA+IFD+++IDTNEVL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLPFRPGLVGGHCIGVDPYYLTFKAESIGFHPQVILAGRRINDGMGKFIAEKTIKAMIDA  312
            FL F+PGLVGGHCIGVDPYYLT KA+ +G HP+VILAGRRIND M+K+IA + IK ++  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GCLIKGARVGLLGLTFKEDVPDLRNSRVEDIIHELSDYHVDVLVHDPLADAAEAKEEYGV  372
            G  ++GA V +LGLTFKE+ PDLRN++V +II+EL +Y ++V V+D  AD  EAK  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  DLLPLPELNQLDALILAVSHAEFAHLDAGRIATMFKNPENGIVIDVKGFLDRDALSRNFR  432
            DL+   EL+ +D +++AV+H ++ +   + I  +    + GIV+D+KG+++ D L+ + R
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKDYINLV---KDCGIVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

30) GM21_2494 in NC_012918


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  410 bits (1541),  Expect = 9e-116, Method: Compositional matrix adjust.
 Identities = 248/425 (59%), Positives = 325/425 (77%), Gaps = 2/425 (0%)

Query  4    NRKISVVGLGYVGLPVAVAFGRVQRTIGFDISAKRIEELRSGWDRTGEVSSEDLVSADIC  63
            NR+I+VVGLGYVGLPVAV+FG  ++ IGFDI+  RI EL++  DRT EV+ + L +++I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  64   FTDKIDELARADFHVVAVPTPVDSANQPDLSLLCSASETVGRALKKGDIVVYESTVYPGV  123
            +T + ++L +ADF ++AVPTP+D  N+PDL  L  ASETVG+ +  + IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  124  TEEVCLPILESVSGLKSLDDFTVGYSPERINPGDKEHTFTSILKVVSGQDRHTLEQVDAV  183
            TEE C+P+LE  SGL    DF VGYSPERINPGDK HTF +I KVVSGQ  + LE V  V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  184  YSSVVKPGVHRAPSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTSEVLAAAGSK  243
            YSSVV +GVH+A+SIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+IDT+EVL A+G+K
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  244  WNFLNFKPGLVGGHCIGVDPYYLTYQAEKIGYIPQVILAGRRINDGMGKFIAQRAVKEII  303
            WNFLNFKPGLVGGHCIGVDPYYLT +A+ +G  P+VILAGRRIND M+K+IA   +KE++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  304  RAGHHVLGSYVTVLGLTFKENCPDLRNSKVVDILTELSDYGLKVQVCDPIADPAEAQQAY  363
            + G +V G+ V VLGLTFKENCPDLRN+KV++I+ EL +YGL+V V D  AD  EA++ +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  364  GVTLKEPEKLHPavaviaavaHDSYRAWGAAKFASLMVENPVLIDVKGIYDSRAMSAAGI  423
            G+ L +   L     V+ AV+H  Y       + +L+ +  +++D+KGI +S  ++ +  
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  424  RVWCL  428
            R+W L
Sbjct  420  RLWRL  424

31) HP15_p187g68 in NC_017507


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  409 bits (1539),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 244/417 (59%), Positives = 321/417 (77%), Gaps = 2/417 (0%)

Query  2    RNIAVIGLGYVGLPLAVAFGEKRPVVGFDINAKRIGELQRGHDVTREVSSEELANASHLR  61
            RNIAV+GLGYVGLP+AV+FG+K+ V+GFDIN  RI EL+   D T EV+ + L + +++ 
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIE  61

Query  62   CTDSLDDLKDCTVFIVTVPTPIDEFKTPDLTPLIKASETVGVVLKPGDIVIYESTVYPGA  121
             T + +DLK    +I++VPTPID  + PDL PL+KASETVG V+ P+ IV+YESTVYPGA
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  122  TEEVCVPVLERLSGLKFNEDFYAGYSPERINPGDKEHRVTTIMKVTSGSTPAIAAEVDAL  181
            TEE CVPVLE+ SGL    DF+ GYSPERINPGDK H   TI KV SG T  +   V  +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  182  YADIITAGTHKASSIKVAEAAKVIENTQRDLNIALMNELSMIFNRLGIDTHEVLAAAGTK  241
            Y+ ++TAG HKASSIKVAEAAKVIENTQRD+NIALMNEL++IF++L+IDT+EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  242  WNFLPFKPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRVNDGMGPYAAAELVKAMI  301
            WNFL FKPGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND M+ Y A++++K ++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  302  KRGVTIADSRVLVMGLTFKENCPDLRNTRVVDVIDELRDYGCVVDVTDCWADPVEAKHEY  361
            K+G+ + ++ V V+GLTFKENCPDLRNT+V+++I+EL++YG  V V D  AD  EAK  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  362  GLKLVAEPQQGFYDAVLLAVPHNDYAAMSAADLRGFAKQGAVLFDLKGALPLGEADL  418
            GL L+   +    D VL+AVPH+DY   +  D   + K+ +++FD+KG +  +E ++
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

32) Despr_1361 in NC_014972


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  409 bits (1540),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 231/417 (56%), Positives = 332/417 (80%), Gaps = 2/417 (0%)

Query  6    NSRIGIIGLGYVGLPLAVEFSKKVPTVGFDLKAQRIDELRRHIDVTREVSSEELRQAGEL  65
            N  I+++GLGYVGLP+AV F++K   +GFD++  RI EL+ + D T EV+ + L+++ ++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NI  60

Query  66   HYTCDIEELRPCNVFIVAVPTPIDTNKRPDFTPLIRASETVAKVLNKGDVVIYESTVYPG  125
            +YT + E+L+  + +I+AVPTPID +++PD+ PL++ASETV+KV+  + +V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  126  ATEEVCVPILERDSGLAFNRDFFAGYSPERINPGDHEHRLPTIMKVTSGSTPEIADFVDA  185
            ATEE CVP+LE+ SGL   +DFF GYSPERINPGD  H + TI KV SG T E+ ++V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  186  LYGLVITAGTFKASSIRVAEAAKVIENTQRDVNIALINELALIFNRLGINTHEVLKAAGT  245
            +Y+ V+TAG  KASSI+VAEAAKVIENTQRDVNIAL+NELA+IF++L+I+T+EVLKA+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  246  KWNFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYHPEMILAGRRLNDDMGRYIASETVKLM  305
            KWNFL F+PGLVGGHCIGVDPYYLTHKAQEVG HPE+ILAGRR+ND+M++YIAS+ +K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  306  LKRRIHVADAHILVLGLTFKENCPDLRNTRVIDIIDELGTFGARVEVHDPWVDQDEARRL  365
            LK+ ++V +A + VLGLTFKENCPDLRNT+VI+II+EL  +G  V V+D   D++EA+++
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  366  YGVTMIDPPSQGRYDAVILAVAHREFATLSAEQLRALCKPAAVIYDVKSTLPPEAVD  422
            +G+ +ID       D V++AV+H+++   +  +   L K  ++++D+K+ + ++ ++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

33) TKWG_20445 in NC_017964


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  408 bits (1536),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 234/416 (57%), Positives = 329/416 (80%), Gaps = 2/416 (0%)

Query  7    KLAIVGLGYVGLPLAVEFGKKRSVLGFDINQKRIKDLQGGVDHTLEVSSEELAEADKLAY  66
            ++A+VGLGYVGLP+AV FG+K+ V+GFDIN+ RIK+L+   D+T EV+ + L +++ + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  67   SADPAELAKCNVYIVTVPTPIDDYKQPDLTPLIKASETIGKVLKKGDIVIYESTVYPGAT  126
            ++++ +L K +  I++VPTPID  ++PDL PL+KASET+GKV+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLEKFSGLKFNEDFFAGYSPERINPGDKNHRVSTIKKVTSGSTPEIADLVNDLY  186
            EE+CVPVLEK+SGL    DFF GYSPERINPGDK H   TI KV SG T E+ ++V D+Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  AEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNRMGIDTEAVLEAAGTKW  246
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF++++IDT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGSYVVSQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  RQIQVQGAKVLVMGLTFKENCPDLRNTRIVDILKELGEYSMDVDVYDPWVDPAEADHEYG  366
            + ++VQGA V V+GLTFKENCPDLRNT++++I+ EL EY+++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVKTPEKGAYDAIILAVSHHQFVSMGAEGIRALGKAQHVLYDLKYVLKADQADI  422
            +  + T E    D +++AV+H +++    + I  L K   +++D+K ++++D+ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

34) Psyc_0650 in NC_007204


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  408 bits (1537),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 232/416 (56%), Positives = 330/416 (80%), Gaps = 2/416 (0%)

Query  8    KIAVIGLGYVGLPLAVEFGKNHSVIGFDINNDRITELTSGMERTLEVSNEELAQAAHLSY  67
            +IAV+GLGYVGLP+AV FG++H VIGFDIN+ RI EL +  +RT EV+++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  68   SSNIQALKDCNFFIVTVPTPIDEYKQPDLTPLIKASESIGSLLKKDDIVVYESTVYPGAT  127
            +SN + LK  +F+I++VPTPID  ++PDL PL+KASE++G ++  D IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEVCIPVLEKISGLVFNQDFYAGYSPERINPGDKEHRVTNILKVTAGSTPEVADFVDEVY  187
            EE C+PVLEK SGLV  +DF+ GYSPERINPGDK H    I KV +G T EV ++V +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  NLIITAGTHKAPSIKVAEAAKVIENTQRDVNIALINELAVIFNKMNIDTEAVLEAAGTKW  247
            + ++TAG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYNPEIILAGRRLNDSMGEYVVTQLVKTMIK  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G +PE+ILAGRR+ND+M+ Y+ ++++K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KRIQVEGAKVLILGLSFKENCPDVRNTKVIDIVRELEEYNIEVEIYDPWVNKAEAEREYN  367
            + ++V+GA V +LGL+FKENCPD+RNTKVI+I+ EL EY ++V + D   +K EA + + 
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  VTPISKLAINTYDGIVLAVAHNEFVEMGVEQIRSLGKTSHVLYDLKYVFTKEDTDI  423
            +  I    ++  D +++AV+H++++E   + I +L K   +++D+K ++  ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

35) RTCIAT899_CH18215 in NC_020059


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  408 bits (1537),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 232/427 (55%), Positives = 327/427 (77%), Gaps = 3/427 (0%)

Query  1    MNEKIAVIGLGYVGLPVAIALAEKFPDVVGFDIKASRVAALKAGEDDTREISAERLQSSG  60
            MN +IAV+GLGYVGLPVA+++++K   V+GFDI+ SR+  LK   D T E++ ++L+++ 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  61   LRVSGDIADLRDRDIFIVAVPTPIDRNRQPDLQPMISASRTVGKVLRKGSVVVYESTVYP  120
            +  +++  DL+  D++I+AVPTPID++ +PDL P++ AS TVGKV+  +++VVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GVTEDVCGPVLAEVSGLRQGEDFHVGYSPERINPGDKEHTFERIVKVVAGDDAQTLERIA  180
            G TE+ C PVL   SGL  G DF VGYSPERINPGDK HTFE I KVV+G+  + LE +A
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  AIYGAVVEAGIHRAPSIKVAEAAKVIENTQRDVNIALMNELSIIFEKMDIRTADVLKAAR  240
             +Y++VV AG+H+A+SIKVAEAAKVIENTQRDVNIALMNEL+IIF+K+DI T +VLKA+ 
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFTPGLVGGHCIGVDPYYLTAKAEELGYHPEVILSGRRINDGMGAFIAQKLIKM  300
            TKWNFL F PGLVGGHCIGVDPYYLT KA+E+G HPEVIL+GRRIND M+ +IA ++IK 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  LVAAKKPINGARIGIFGLTFKENVPDLRNSRVPDIISELHQFGLEPLVHDPMASTSEAEE  360
            L+     ++GA + ++GLTFKEN PDLRN++V +II EL ++GL+  V+D  A  +EA  
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  361  EYGIKLRELRDFGKLDAIVLAVPHKSYLAEGAATILDLLSENGVVVDVKAALDRANPLLE  420
             +G+ L + +++  +D +++AVPHK Y+ E     ++L+ + G+V D+K+ ++ ++ L  
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYM-ENKKDYINLVKDCGIVFDIKGIIN-SDELNV  417

Query  421  DHSVWSL  427
             + +W L
Sbjct  418  SQRLWRL  424

36) wecC in NC_006300


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  408 bits (1535),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 240/418 (58%), Positives = 331/418 (80%), Gaps = 7/418 (1%)

Query  12   KVGVIGLGYVGLPLAVEFGKHRFTVGFDISPNRVKELSEGKDRTLEVSSEALKSVTHLSF  71
            +++V+GLGYVGLP+AV FG+ +  +GFDI+ +R+KEL +  DRT EV+ + LK+ T++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  72   TSDLEQLKQCNFFIVTVPTPIDDVNRPDLTPLQKASESIGKVLKQGDIVVYESTVYPGAT  131
            TS+ E+LK+ +F+I++VPTPID  N+PDL PL KASE++GKV+  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEVCIPVLEKVSGLKFNQDFFAGYSPERINPGDKVNTLTKIKKITSGSTPEVADIVDQMY  191
            EE C+PVLEK SGL   +DFF GYSPERINPGDKV+T+  I K+ SG T EV +IV ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  ASIIEAGTHKASSIKVAEAAKVIENTQRDLNIALVNELSIIFERVGIDTLDVLEAAGSKW  251
            +S++ AG HKASSIKVAEAAKVIENTQRD+NIAL+NEL+IIF++++IDT +VL A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAEEVGYNPQVILAGRRINDNMSQYVAQETIKLMLN  311
            NFL F+PGLVGGHCIGVDPYYLTHKA+EVG +P+VILAGRRINDNM++Y+A + IK +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  NNIDVAHAKVGILGVTFKENCPDIRNSKVVDVVTELKNWGVEVVVADPWADAQEVKHEYG  371
            + ++V  A V +LG+TFKENCPD+RN+KV++++ ELK+ G++V V D  AD +E K  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  LDLSSVDENNPVDALIVAVGHKEFRDLSAETLRSYLRTSK--PVLADVKSLFDRDALA  427
            LDL    E + VD ++ AV HK++     E  + Y+   K   ++ D+K++++ D L 
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYM----ENKKDYINLVKDCGIVFDIKGIINSDELN  416

37) CAP2UW1_3279 in NC_013194


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  408 bits (1535),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 234/423 (56%), Positives = 331/423 (79%), Gaps = 3/423 (0%)

Query  4    VAVVGLGYVGLPLAVEFGKKGRTIGFDLSASKVAHYRQHVDPTGEVSSADLAAAVHLEVG  63
            +AVVGLGYVGLP+AV FG+K + IGFD++ S++ + +++ D T EV+   L  + ++E  
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEYT  63

Query  64   TDPAALAEADFLIVAVPTPVDQAHQPDFAPLIGSSEAVGRNLKRGATVVFESTVYPGATE  123
            +++  L  ADF+I+AVPTP+D+ ++PD+ PL+ +SE+VG+ +  ++ VV+ESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  124  EICIPIIEKHSGMKWKKDFFVGYSPERINPGDKERTLTRIVKVVSGDTPETLERVREVYA  183
            E C+P++EK SG+   KDFFVGYSPERINPGDK +T+  I KVVSG+T E LE V +VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  184  SVITAGVYPASSIKVAEAAKVIENTQRDLNIALMNELAIIFDRIGIDTLEVLEAAGSKWN  243
            SV+TAGV  ASSIKVAEAAKVIENTQRD+NIALMNELAIIFD+++IDT EVL A+G+KWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  244  FLPFRPGLVGGHCIGVDPYYLTHKAEMLGYHPEVINAGRRINDGMGKFIAEQTVKQMIRN  303
            FL F+PGLVGGHCIGVDPYYLTHKA+ +G HPEVI AGRRIND M+K+IA + +K+++++
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  304  GWQVKDAPIIVLGLTFKEDCPDLRNSRVIDVIRELESYGARVFVHEPVADADEARHEYGV  363
            G +V++A + VLGLTFKE+CPDLRN++VI++I EL  YG  V V++  AD +EA+  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  364  ALTDWDDLPQAAAIVAAVGHRQFKERPLTDYVGKLQQRGVLTDVKSMFNEAQLVSQGVTV  423
             L D  +L     ++ AV H+++ E    DY+  +++ G++ D+K+++N  +L + +  +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDEL-NVSQRL  421

Query  424  WRL  426
            WRL
Sbjct  422  WRL  424

38) Cri9333_3497 in NC_019753


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  407 bits (1533),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 235/426 (56%), Positives = 330/426 (78%), Gaps = 2/426 (0%)

Query  1    MSDRIAIIGLGYVGLPVALAFAKNFSGTIGFDINYEKVTALKQGIDTTGEIPSDELIATT  60
            M+  IA++GLGYVGLPVA++F+++    IGFDIN  ++  LK+  D T E+  + L  T 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  61   LQITSDPVDLKAANFFVVAVPTPIDRYNRPDLTPLIKSSETIGKVLQPGSVVVYESTVYP  120
            ++ TS++ DLK A+F+++AVPTPID+ N+PDL PL+K+SET+GKV+ P+++VVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GVTEEICGPILAKASGLTQGIDFKLGYSPERINPGDKEHTIEKIVKVVSGEDAETLERVA  180
            G TEE C P+L K SGL  G DF +GYSPERINPGDK HT+E I KVVSG+  E LE VA
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  KVYGTIIDAGVHRAQSIKVAEAAKVIENTQRDLNIALMNELAVIFDRLGIRTHDVLAAAK  240
             VY++++ AGVH+A SIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+I T++VL A+ 
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFNPGLVGGHCIGVDPYYLTTKAQQLGYHPEVILAGRRINDSMGTYIAQRLIKL  300
            TKWNFL F+PGLVGGHCIGVDPYYLT KAQ++G HPEVILAGRRIND+M+ YIA  +IK 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  FVKSNLRIQGAKVGILGLTFKENVPDLRNSRVPDIVAELRQFGIEPLVHDSLVTSEQAQH  360
            ++K  L +QGA V +LGLTFKEN PDLRN++V +I+ EL+++G++  V+D     ++A+ 
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  361  EYGIQLTDWQDFSDLDGMILAVSHRFYLDMPREQLLAGIKTGGVLMDVKSAFDPATLPEN  420
             +G++L D +++  +D +++AV+H+ Y++  + + +  +K  G++ D+K+ +++  L  +
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVS  418

Query  421  LTYWSL  426
               W L
Sbjct  419  QRLWRL  424

39) Nmul_A0270 in NC_007614


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  407 bits (1532),  Expect = 5e-115, Method: Compositional matrix adjust.
 Identities = 242/423 (58%), Positives = 335/423 (80%), Gaps = 3/423 (0%)

Query  2    VAVVGLGYVGLPLAVEFGKKRKTIGYDLSSSKIASYKQFIDPTGEVSSDDLKAAKQLHVT  61
            +AVVGLGYVGLP+AV FG+K+K IG+D++ S+I   K+  D T EV+ + LK + +++ T
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEYT  63

Query  62   TDPAELSQADYIVVAVPTPVDAAHQPDFRPLIGASETVGKHMKRGAIVIYESTVYPGATE  121
            +++ +L +AD+I++AVPTP+D  ++PD+ PL+ ASETVGK +  ++IV+YESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  122  EVCIPVLEKHSGMKWKDDFHVGFSPERINPGDKQHTLTKILKVVSGDDEDTLEKIAALYE  181
            E C+PVLEK SG+    DF VG+SPERINPGDK HT+  I KVVSG+  + LE +A +Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  182  SIITAGVHRASSIKVAEAAKVIENTQRDLNIALMNELAIIFDKLDIDTLEVLQAAGTKWN  241
            S++TAGVH+ASSIKVAEAAKVIENTQRD+NIALMNELAIIFDKLDIDT EVL+A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  242  FLPFRPGLVGGHCIGVDPYYLTHKAEMVGYIPQVILAGRRINDSMAKFVAEQTIKHIIKA  301
            FL F+PGLVGGHCIGVDPYYLTHKA+ VG  P+VILAGRRIND+MAK++A + IK+++K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  302  DINVRSARVNVLGLAFKENCPDLRNSKVADLISELKSYGIEIHVHDPVASIEEARHEYGV  361
            +++V++A VNVLGL+FKENCPDLRN+KV ++I ELK YG+++ V+D  A  +EA+  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  362  ELESWEDLPRADAMIVAVAHRQFTEMPLTQFQTKITDKGCFIDVKSQFDPAALREAGLNV  421
            +L    +L   D ++ AV+H+++ E    ++   + D G  +D+K+ +++  L + +  +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDEL-NVSQRL  421

Query  422  WRL  424
            WRL
Sbjct  422  WRL  424

40) SYO3AOP1_1757 in NC_010730


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  406 bits (1527),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 255/425 (60%), Positives = 340/425 (80%), Gaps = 4/425 (0%)

Query  13   KIAIVGLGYVGLPLAVLFDTKFNVIGFDINPARIKELKQGFDRTKEVEKEKLLNCQIEFT  72
            +IA+VGLGYVGLP+AV F+ K +VIGFDIN +RIKELK+ +DRT+EV  +KL N +IE+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   DNPEKLKEARVIIITVPTPVDKHNIPDLRPIISATKTVGKYLKKGSIVVYESTVYPGLTE  132
             N+E LK A  III+VPTP+DKHN PDL P++ A+ TVGK +  ++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EECVPILQQESGLKWKEDFNVGYSPERVNPGDKNHTIDKIIKVVAGDTPKITEFLAQLYG  192
            EECVP+L++ SGL    DF VGYSPER+NPGDK HT++ I KVV+G+T  + E++A++Y+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  SVITAGIHRAPNIKTAEAAKVIENTQRDLNIALMNELSIIFNKIGIDTKEVLEAAGTKWN  252
            SV+TAG+H+A++IK AEAAKVIENTQRD+NIALMNEL+IIF+K++IDT+EVL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLKFEPGLVGGHCIGVDPYYLTFKAQAIGYHPEVILAGRRINDYMGKYVAENTVKKLIKA  312
            FL+F PGLVGGHCIGVDPYYLT KAQ +G HPEVILAGRRIND M+KY+A N +K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GKQIKGSKVLILGLTFKENISDIRNTKVIDVVNELKDFGINVYVYDPYAYPEEVKHEYGI  372
            G +++G+ V +LGLTFKEN +D+RNTKVI++++ELK++G+NV V D  A  +E K  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  DLLEDINSQKPYDAVIVAVRHNVFMQEKDLSFYKNLMNSNPVLIDIKGIYDKEKAIKNGF  432
            DL+ D +  K  D V+ AV H+ +M++K    Y NL++   +++DIKGI + +    +  
Sbjct  364  DLI-DTKELKMVDVVLFAVPHKDYMENKKD--YINLVKDCGIVFDIKGIINSDELNVSQR  420

Query  433  LYWRL  437
            L WRL
Sbjct  421  L-WRL  424

41) GM21_2445 in NC_012918


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  406 bits (1527),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 247/426 (58%), Positives = 330/426 (78%), Gaps = 2/426 (0%)

Query  3    VERIVSVVGLGYVGLPVAVAFGKVRRTIGFDINGTRIKELREGYDRTAEVEPGDLTQADI  62
            ++R ++VVGLGYVGLPVAV+FG+ ++ IGFDIN +RIKEL++ YDRT EV    L +++I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  63   LFTDRVEDLREANFHIVAVPTPIDEANQPDLSLVCRASETVGKALKKGDIVVYESTVYPG  122
             +T   EDL+ A+F I+AVPTPID  N+PDL  + +ASETVGK +  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  VTEDECVPILERVSGLKGGVDFKVGYSPERINPGDKEHTFTKIKKVVSGQDQETLETVAQ  182
             TE+ECVP+LE+ SGL  G DF VGYSPERINPGDK HTF  I KVVSGQ  E LE VA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  183  VYGSVVTAGVFRASSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGINTSEVLAAAGS  242
            VY+SVVTAGV +ASSIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+I+T+EVL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNFLKFSPGLVGGHCIGVDPYYLTHKAEKLGYIPQVILAGRRINDGMGKFVAQRAVKEI  302
            KWNFL+F PGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+K++A   +KE+
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  IRAGHPVLNAVVTVLGITFKENCPDIRNSRVIDIVKELLDYGMQVQVCDPLADPEETLHE  362
            ++ G  V  A V VLG+TFKENCPD+RN++VI+I+ EL +YG++V V D  AD +E+   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  363  YGVRLTPRAQLKPavavvaavahaEFASLTAPELLALMGPKPVLIDVKSMFDRERVEGAG  422
            +G+ L    +LK    V+ AV+H ++      + + L+    +++D+K++++ + ++ + 
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ  419

Query  423  IKVWTL  428
             ++W L
Sbjct  420  -RLWRL  424

42) azo3189 in NC_008702


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  405 bits (1524),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 240/424 (57%), Positives = 325/424 (77%), Gaps = 3/424 (0%)

Query  3    TIAVIGLGYVGLPLAVAFGKQFRTIGFDLSAEKVAAYKDFIDPTGEVSSEELKAAEHLSC  62
             IAV+GLGYVGLP+AV+FG++ + IGFD++  ++   K+  D T EV+ + LK + ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  63   HTDPAVLREADFVIVAVPTPVDEAHNPDFTPLVKSSETVGRNLKPGAIVVYESTVYPGAT  122
             +++  L+ ADF+I+AVPTP+D  ++PD+ PL+K+SETVG+ + P++IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  123  EEVCIPILERESGLKWKEGFFVGYSPERINPGDKERTVTKIVKVVSGDTPETLATVERVY  182
            EE C+P+LE+ SGL    +FFVGYSPERINPGDK +T   I KVVSG+T E L  V  VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  183  GAVITAGVYPASSIKVAEAAKVIENTQRDLNIALMNELAVIFHKIGIDTLEVLKAAGTKW  242
            ++V+TAGV  ASSIKVAEAAKVIENTQRD+NIALMNELA+IF+K++IDT EVLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  243  NFLPFRPGLVGGHCIGVDPYYLTYKADMLGYHPQVILAGRRINDGMGKYVAEQTVKQMIA  302
            NFL F+PGLVGGHCIGVDPYYLT KA+ +G HP+VILAGRRIND M+KY+A + +K+++ 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  303  AGSSIKGAKVVVLGLTFKENCPDLRNSKVIDVIRELQSYGCDVIVHDPVAAAAEAVHEYG  362
             G  ++GA V VLGLTFKENCPDLRN+KVI++I EL+ YG +V V+D  A   EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  363  VDLVAWDALPTAEAVVAAVSHREYLDMPLAQMLGKLKPGGVFVDVKSAYDPAELTAAGAR  422
            +DL+    L   + V+ AV+H++Y++    + +  +K  G+  D+K+  ++ EL  +  R
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNVS-QR  420

Query  423  LWRL  426
            LWRL
Sbjct  421  LWRL  424

43) VVMO6_02776 in NC_014965


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  404 bits (1521),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 238/418 (57%), Positives = 326/418 (78%), Gaps = 2/418 (0%)

Query  7    NAKVGIIGLGYVGLPLAVEFGKQRQTIGFDINQSRINELSTGHDSTLECSDTELAEATKL  66
            N +++++GLGYVGLP+AV FG++++ IGFDIN+SRI+EL    D T E ++  L + T++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNI  60

Query  67   VYTTSLDALKECNVFIVTVPTPIDEHKQPDLTPLIKASETLGKVIKQGDVIIYESTVYPG  126
             YT++ + LK  + +I++VPTPID H++PDL PL+KASET+GKVI  + +++YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  127  ATEDDCIPVVERVSGLKFNQDFFAGYSPERINPGDKEHRVTNILKVTSGSTPEVAEYVDQ  186
            ATE++C+PV+E+ SGL   +DFF GYSPERINPGDK H    I KV SG T EV E V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  187  LYKTIIVAGTHKASCIKVAEAAKVIENTQRDVNIALINELSIIFNKLGIDTLEVLEAAGT  246
            +Y +++ AG HKAS IKVAEAAKVIENTQRDVNIAL+NEL+IIF+KL+IDT EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  247  KWNFLPFRPGLVGGHCIGVDPYYLTHKAQSVGYHPEMILAGRRLNDGMGQYVVSQLVKKM  306
            KWNFL F+PGLVGGHCIGVDPYYLTHKAQ VG HPE+ILAGRR+ND M++Y+ S+++K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  307  LKKRIHVEGANVLVMGLTFKENCPDLRNTKVVDIIAELKEYNINVDITDPWCSNEEAMHE  366
            LK+ ++V+GA V V+GLTFKENCPDLRNTKV++II ELKEY +NV + D    ++EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  367  YGLSLCEKPKQSHYDAIIMAVAHNEFREMGAEAIRALGKAEHVLYDLKYILNKQNVDM  424
            +GL L +       D ++ AV+H+++ E   + I  L K   +++D+K I+N +++++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

44) AB57_0094 in NC_011586


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  404 bits (1519),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 237/416 (57%), Positives = 326/416 (79%), Gaps = 2/416 (0%)

Query  7    RIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRISELKSGQDHTLEVSPEELKQAAQLSY  66
             IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELK+  D+T EV+ + LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TANLEDLKDCNFFIITVPTPIDDYKQPDLTPLVKASTSIGKVLKKGDIVIYESTVYPGAT  126
            T+N EDLK  +F+II+VPTPID  ++PDL PL+KAS ++GKV+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEEISGLTFNKDFFAGYSPERINPGDKLHRVTNILKITSGSTPEIADFVDQVY  186
            EE C+PVLE  SGL   KDFF GYSPERINPGDK+H    I K+ SG T E+ ++V +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLVIEAGTHKAPSIKVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEDVLKAAGTKW  246
            + V+ AG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDHMGAYVVTQLVKGMIK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ ++++K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KKIQVEGAKVLILGLSFKENCPDIRNTKIIDIVTELKEYETQVDVYDPWIDPTEAEHEYG  366
            + ++V+GA V +LGL+FKENCPD+RNTK+I+I+ ELKEY  +V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVQSVEKNTYDAVILAVAHEQFKEMGATAIRALGKNNHVLYDLKYVLSQAESDI  422
            +  +++ E +  D V++AV+H ++ E        L K+  +++D+K +++  E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

45) M3Q_284 in NC_018706


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  403 bits (1515),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 326/416 (79%), Gaps = 2/416 (0%)

Query  8    KIAIIGLGYVGLPLAVEFGKHKPTIGFDINTDRIQELKSGHDHTLEVTSDELKHVHQLSY  67
            +IA++GLGYVGLP+AV FG+    IGFDIN  RI+ELK+  D+T EVT + LK+ + + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  68   TADIEDLKTANFFIVTVPTPIDDFKQPDLTPLVKASQSIAKVLKKGDIVVYESTVYPGAT  127
            T++ EDLK A+F+I++VPTPID  ++PDL PL+KAS++++KV+  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEVCIPELEKHSGLNFNKDFFVGYSPERINPGDKQRRVTNILKITSGSTPDVADYIDQVY  187
            EE C+P LEK SGL   KDFFVGYSPERINPGDK +    I K+ SG T +V + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  NLIIEVGTHKAPTIKVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEDVLKAAGTKW  247
            + ++  G HKA++IKVAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLNFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEYVATQLIKEMVK  307
            NFLNF+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+ Y+A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  QRIQVVGARILILGLSFKENCPDIRNTKIVDMVKALKEYDLDLDIYDPWVDSAEVEGEYG  367
            Q ++V GA + +LGL+FKENCPD+RNTK+++++  LKEY+L++ + D   D  E    +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  LAPVTELKQDHYDAIVIAVAHDQFKAMSSQELIALGKEKHVLYDLKYVLDKEQSDI  423
            L  +        D +++AV+H ++   + ++ I L K+  +++D+K +++ ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

46) capL-2 in NC_011146


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  403 bits (1518),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 243/372 (66%), Positives = 301/372 (81%), Gaps = 0/372 (0%)

Query  24   VERIVSVVGLGYVGLPVAVAFGKVRRAIGFDINGTRIKELCEGYDRTAEVEAGDLAQADI  83
            ++R ++VVGLGYVGLPVAV+FG+ ++ IGFDIN +RIKEL + YDRT EV    L +++I
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  84   LFTDRVEDLAQANFHIVAVPTPIDEANQPDLSLVCRASETVGKALKKGDIVVYESTVYPG  143
             +T   EDL +A+F I+AVPTPID  N+PDL  + +ASETVGK +  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  144  VTEDECVPVLERVSGLKGGIDFKVGYSPERINPGDKEHTFTKIKKVVSGQDSETLEVVAE  203
             TE+ECVPVLE+ SGL  G DF VGYSPERINPGDK HTF  I KVVSGQ  E LE+VA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  204  VYSSVVTAGVFRASSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTSEVLAAAGS  263
            VYSSVVTAGV +ASSIKVAEAAKVIENTQRD+NIALMNELA+IFD+L+IDT+EVL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  264  KWNFLKFSPGLVGGHCIGVDPYYLTHKAEKLGYIPQVILAGRRINDGMGKFVAQRAVKEI  323
            KWNFL+F PGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+K++A   +KE+
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  324  IRAGHPVLNAVVTVLGITFKENCPDIRNSKVIDIVKELKDYGMQVQVCDPMADPEETLHE  383
            ++ G  V  A V VLG+TFKENCPD+RN+KVI+I+ ELK+YG++V V D  AD +E+   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  384  YGVRLTPREQLK  395
            +G+ L    +LK
Sbjct  361  FGLDLIDTKELK  372

47) ABBFA_003458 in NC_011595


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  403 bits (1518),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 235/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  7    RIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRISELKSGQDHTLEVSPEELKQAAQLSY  66
             IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELK+  D+T EV+ + LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TTNLEDLKDCNFFIVTVPTPIDNYKQPDLTPLVKASTSIGKILKKGDIVVYESTVYPGAT  126
            T+N EDLK  +F+I++VPTPID+ ++PDL PL+KAS ++GK++  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEEVSGLTFNKDFYAGYSPERINPGDKLHRVTNILKITSGSTPEISEFIDEVY  186
            EE C+PVLE  SGL   KDF+ GYSPERINPGDK+H    I K+ SG T E+ E++ +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPSIKVAEAAKVIENTQRDVNIALINELALIFNKLGIDTEDVLKAAGTKW  246
            + ++ AG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+KL+IDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGAYVVTQLVKGMIK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ ++++K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KKIQVEGAKVLVLGLSFKENCPDIRNTKVIDIVKELQEYHMDVDVYDPWIDSEETQHEYG  366
            + ++V+GA V VLGL+FKENCPD+RNTKVI+I+ EL+EY ++V V D   D +E++  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVKQPTAGQYDAVILAVAHNEFKEMGIEAIRSLGKTSHVLYDLKYVLAQSESDI  422
            +  +        D V++AV+H+++ E   + I +L K   +++D+K ++   E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

48) ABAYE3815 in NC_010410


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  403 bits (1518),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 235/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  7    RIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRISELKSGQDHTLEVSPEELKQAAQLSY  66
             IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELK+  D+T EV+ + LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TTNLEDLKDCNFFIVTVPTPIDNYKQPDLTPLVKASTSIGKILKKGDIVVYESTVYPGAT  126
            T+N EDLK  +F+I++VPTPID+ ++PDL PL+KAS ++GK++  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEEVSGLTFNKDFYAGYSPERINPGDKLHRVTNILKITSGSTPEISEFIDEVY  186
            EE C+PVLE  SGL   KDF+ GYSPERINPGDK+H    I K+ SG T E+ E++ +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPSIKVAEAAKVIENTQRDVNIALINELALIFNKLGIDTEDVLKAAGTKW  246
            + ++ AG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+KL+IDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGAYVVTQLVKGMIK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ ++++K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KKIQVEGAKVLVLGLSFKENCPDIRNTKVIDIVKELQEYHMDVDVYDPWIDSEETQHEYG  366
            + ++V+GA V VLGL+FKENCPD+RNTKVI+I+ EL+EY ++V V D   D +E++  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVKQPTAGQYDAVILAVAHNEFKEMGIEAIRSLGKTSHVLYDLKYVLAQSESDI  422
            +  +        D V++AV+H+++ E   + I +L K   +++D+K ++   E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

49) Tmz1t_1116 in NC_011662


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  403 bits (1517),  Expect = 7e-114, Method: Compositional matrix adjust.
 Identities = 234/406 (58%), Positives = 317/406 (79%), Gaps = 2/406 (0%)

Query  8    KLAIIGLGYVGLPLAVEFAKKRSVVGFDINQARIDALKTGHDATLEVSDEELREATGLQY  67
            ++A++GLGYVGLP+AV F++K+ V+GFDIN++RI  LK   D T EV+++ L++ T ++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  68   SANLQDLAACNTFIVTVPTPIDEHKQPDLTPLVKASETIGKVLKKGDIVIYESTVYPGAT  127
            ++N +DL   + +I++VPTPID H++PDL PL+KASET+GKV+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEDCVPVLEKFSGLKFNVDFYAGYSPERINPGDKEHRVSTIKKVTSGSTPEVAELVDQLY  187
            EE+CVPVLEK+SGL    DF+ GYSPERINPGDK H   TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  RQIIVVGTHKAESIKVAEAAKVIENTQRDVNIALINELAIIFNKMGIDTEAVLQAAGSKW  247
              ++  G HKA SIKVAEAAKVIENTQRDVNIAL+NELAIIF+K++IDT+ VL+A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDGMGAYVVSQLVKAMLK  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND M+ Y+ S+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRITVEGARVLVMGLTFKENCPDLRNTRIVDIVKELGEYNIQADVYDPWVDVAEAQHEYG  367
            + + V+GA V V+GLTFKENCPDLRNT++++I+ EL EY ++  V D   D  EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  LTPIDKPEPGAYDAIIVGVAHQQFKDMGAEAIRALGKPEHVVYDLK  413
            L  ID  E    D ++ +V+H+++ +   + I  L K   +V+D+K
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIK  407

50) wbgT in NC_007385


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  403 bits (1517),  Expect = 8e-114, Method: Compositional matrix adjust.
 Identities = 243/419 (58%), Positives = 326/419 (78%), Gaps = 2/419 (0%)

Query  17   LNAKIGIIGLGYVGLPLAVEFGKKVTTIGFDINKSRIDELRNGHDSTLECSNLELLEATK  76
            +N +I+++GLGYVGLP+AV FG+K   IGFDIN SRI EL+N  D T E ++ + L  T+
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTE-NKLKNTN  59

Query  77   LTYACSLDALKECNVFIVTVPTPIDKHKQPDLTPLIKASETLGKIIKKGDVIIYESTVYP  136
            + Y+ + + LK  + +I++VPTPIDKH++PDL PL+KASET+GK+I  + +++YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  137  GATEEDCIPVVEKVSGLKFNIDFFAGYSPERINPGDKEHRVTNILKVTSGSTPDVAEYVD  196
            GATEE+C+PV+EK SGL    DFF GYSPERINPGDK H    I KV SG T +V E V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  197  QLYKLIITVGTHKASSIKVAEAAKVIENTQRDVNIALINELSIIFNKLGIDTLEVLEAAG  256
            ++Y  ++T G HKASSIKVAEAAKVIENTQRDVNIAL+NEL+IIF+KL+IDT EVL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  257  TKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSVGYHPEMILAGRRLNDSMGQYVVSQLVKK  316
            TKWNFL F+PGLVGGHCIGVDPYYLTHKAQ VG HPE+ILAGRR+ND+M++Y+ S+++K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  317  MLKQRIQVEGANVLVMGLTFKENCPDLRNTKVIDIISELKEYNINIDIIDPWCSTDEAQH  376
            +LKQ ++V+GA V V+GLTFKENCPDLRNTKVI+II ELKEY +N+ + D     +EA+ 
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  377  EYGLTLCEDPKVNHYDAIIIAVAHNEFREMGESAIRALGKDEHVLFDLKYVLDKKSIDM  435
             +GL L +   ++  D +++AV+H+++ E     I  L KD  ++FD+K +++   +++
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

51) vipA in NC_016603


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  402 bits (1513),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 242/420 (58%), Positives = 329/420 (79%), Gaps = 11/420 (2%)

Query  7    RIAIIGLGYVGLPLAVEFGKKGPVIGFDINQNRINELKSGQDHTLEVTPEELQKAEQLSF  66
             IA++GLGYVGLP+AV FG+K  VIGFDIN++RI+ELK+  D+T EVT + L K  ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  67   SANLADLEESNFFIVTVPTPVDQVNRPDLTPLKKASETVGQVLKKGGIVVYESTVYPGAT  126
            ++N  DL  ++F+I++VPTP+D+ N+PDL PL KASETVG+V+  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPILEKISGLKFNQDFFAGYSPERINPGDKVNTLTKIKKITSGSTPEVADTVDAVY  186
            EE C+P+LEK SGL   +DFF GYSPERINPGDKV+T+  I K+ SG T EV + V  VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  ASIITAGTHKASSIKVAEAAKVIENTQRDLNIALVNELSVIFDRIGIDTLDVLEAAGSKW  246
            +S++TAG HKASSIKVAEAAKVIENTQRD+NIAL+NEL++IFD+++IDT +VL A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIKLMLQ  306
            NFL F+PGLVGGHCIGVDPYYLTHKA+EVG HP+VILAGRRINDNMA+Y+A N IK +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  NGIDVPRAKVGVLGVTFKENCPDIRNSKVADLIKELEFWGAQVVVADPWADADEVRHEYG  366
            +G++V  A V VLG+TFKENCPD+RN+KV ++I EL   G +V V D  AD +E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  IELGKVDAQNPVDSVIVAVGHNEFRSLSANELRNYVK----CEKPVLADVKSLFDRTEMS  422
            ++L      + VD V+ AV H+++     ++ ++Y++    C   ++ D+K++++  E++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYM----ENKKDYINLVKDCG--IVFDIKGIINSDELN  416

52) Ftrac_2667 in NC_014759


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  402 bits (1511),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 239/420 (57%), Positives = 328/420 (79%), Gaps = 6/420 (1%)

Query  13   KKIAVIGLGYVGLPLAAEFGKYREVLGFDINKKRVQELKDGYDRTLEVDSDELKGAKHLQ  72
            ++IAV+GLGYVGLP+A  FG+ + V+GFDIN  R++ELK+ YDRT EV  + LK + +++
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIE  61

Query  73   YTAEIEDLKEADYYIITVPTPINEYKQPDLTPLKMASATVGKTLKKGDIVIYESTVYPGC  132
            YT++ EDLK AD+ II+VPTPI+  ++PDL PL  AS TVGK +  + IV+YESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  133  TEDDCVPILEKESGLKFNQDFFCGYSPERINPGDKEHRLPTIKKVTSGSTPEIAEEVDQL  192
            TE++CVP+LEK SGL   +DFF GYSPERINPGDK H + TI KV SG T E+ E V ++
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  193  YKEIITAGTHKAATIKVAEAAKVIENSQRDLNIAFVNELALIFDKMGIDTADVLEAAGTK  252
            Y  ++TAG HKA++IKVAEAAKVIEN+QRD+NIA++NELA+IFDK++IDT +VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  253  WNFLPFKPGLVGGHCIGVDPYYLTHKAEALGYHPQVILAGRRINDNMGAHVASSVVKLMA  312
            WNFL FKPGLVGGHCIGVDPYYLTHKA+ +G HP+VILAGRRINDNM+  +AS+V+K + 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  313  QKGSVIKGSKALVMGITFKENCPDIRNSKVIDVIKELQSYGIDVETYDPQADKEEVKHEY  372
            ++G  ++G+   V+G+TFKENCPD+RN+KVI++I EL+ YG++V   D +ADK+E K  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  373  GVELIDKPSSDYNAIVL-AVSHKEFKDFNLS--NHLNSNGVTYDIKGFFERG--KADKRL  427
            G++LID        +VL AV+HK++ + +    N ++  G+ +DIKG+++ +  +  +RL
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

53) Hoch_5211 in NC_013440


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  402 bits (1512),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 235/422 (56%), Positives = 326/422 (78%), Gaps = 1/422 (0%)

Query  8    TIAVIGLGYVGLPVALSFAKKYPTIGFDISERRIKELREGLDVTAEVESEDLTSSKIKFS  67
             IAV+GLGYVGLPVA++F++K   IGFDI+E RIKEL++  D T EV  + L +++I ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  68   ADPADLAEATFIIVAVPTPIDKNNRPDLTPVIGASRTVGKNLRKGAVVVYESTVYPGVTE  127
            +++ DL  A FII+AVPTPIDK+N+PDL P++ AS TVGK +  +++VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  128  EECGPVLEQESGLKAGEDFFLGYSPERINPGDKEHTFERIVKVVSGQDAATLDRVSEVYS  187
            EEC PVLE+ SGL  G DFF+GYSPERINPGDK HTFE I KVVSGQ    L+ V++VYS
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  188  SVVTAGVHRASTIKVAEAAKVIENTQRDLNIALMNELALIFDRVGIRTKDVLEAAGTKWN  247
            SVVTAGVH+AS+IKVAEAAKVIENTQRD+NIALMNELA+IFD+++I T++VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  248  FLKFTPGLVGGHCIGVDPYYLTTKAEELGYQPEVILAGRRINNNIGAFVAQKALKLMAAG  307
            FL+F PGLVGGHCIGVDPYYLT KA+E+G +PEVILAGRRIN+N++ ++A + +K +   
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  308  KVPLHLAKVGIFGLTFKENVPDLRNSKVPDIVHELRQFGVVPLVHDPMGDSEEAEHEYGI  367
             + ++ A V ++GLTFKEN PDLRN+KV +I++EL+++G+   V+D  +D +EA   +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  368  KLSPWEDMSDLNAAIFAVSHSFYLDQGIEALLARVRPGGAFVDVKSAFQPSDISDKYAYW  427
             L    ++  ++  +FAV+H  Y+++  +  +  V+  G   D+K+ +++ +++     W
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKD-YINLVKDCGIVFDIKGIINSDELNVSQRLW  422

Query  428  SL  429
             L
Sbjct  423  RL  424

54) wbpO in NC_021150


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  402 bits (1513),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 219/416 (53%), Positives = 325/416 (79%), Gaps = 2/416 (0%)

Query  8    KLAIIGLGYVGLPLAVEFGKRRPVVGFDIDHARIAALEAGHDRTLEVDDHELREARQLRY  67
            ++A++GLGYVGLP+AV FG+++ V+GFDI+++RI  L    DRT EV ++ L+++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  68   SADIASLADCNFYIVTVPTPIDSHKKPDLLPLIRASETIGQVLKRGDIVVYESTVYPGAT  127
            +++   L   +F I++VPTPID H+KPDLLPL++ASET+G+V+  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEGCVPVLERVSGLAFNRDFYAGYSPERINPGDREHRITGIRKITSGSTPEVAELVDALY  187
            EE CVPVLE+ SGL   +DF+ GYSPERINPGD+ H +  I K+ SG T EV E+V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  REIIAAGTYKADSIRIAEAAKVIENTQRDLNIALVNELAVIFNRMGIDTEAVLQAAGTKW  247
              +++AG  KA SI++AEAAKVIENTQRD+NIAL+NELA+IF++++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAEAIGYHPEIILAGRRLNDGMGGYVVSQLIKAMLR  307
            NFL F+PGLVGGHCIGVDPYYLTHKA+ +G HPE+ILAGRR+ND M+ Y+ S++IK +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIQIDGARALVMGLTFKENCPDLRNTRVVDIIQELRQYNISVDVYDPWVDAEEARRAYD  367
            + ++++GA   V+GLTFKENCPDLRNT+V++II+EL++Y ++V V D   D +EA++ ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IRPLDSPPASAYDGIILAVAHHQFRSMGAPGIRRFGKPGHVLYDLKYLLKPDEADL  423
            +  +D+      D +++AV+H ++      +   + K   +++D+K ++++DE ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

55) wbpO in NC_021149


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  402 bits (1513),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 219/416 (53%), Positives = 325/416 (79%), Gaps = 2/416 (0%)

Query  8    KLAIIGLGYVGLPLAVEFGKRRPVVGFDIDHARIAALEAGHDRTLEVDDHELREARQLRY  67
            ++A++GLGYVGLP+AV FG+++ V+GFDI+++RI  L    DRT EV ++ L+++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  68   SADIASLADCNFYIVTVPTPIDSHKKPDLLPLIRASETIGQVLKRGDIVVYESTVYPGAT  127
            +++   L   +F I++VPTPID H+KPDLLPL++ASET+G+V+  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEGCVPVLERVSGLAFNRDFYAGYSPERINPGDREHRITGIRKITSGSTPEVAELVDALY  187
            EE CVPVLE+ SGL   +DF+ GYSPERINPGD+ H +  I K+ SG T EV E+V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  REIIAAGTYKADSIRIAEAAKVIENTQRDLNIALVNELAVIFNRMGIDTEAVLQAAGTKW  247
              +++AG  KA SI++AEAAKVIENTQRD+NIAL+NELA+IF++++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAEAIGYHPEIILAGRRLNDGMGGYVVSQLIKAMLR  307
            NFL F+PGLVGGHCIGVDPYYLTHKA+ +G HPE+ILAGRR+ND M+ Y+ S++IK +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIQIDGARALVMGLTFKENCPDLRNTRVVDIIQELRQYNISVDVYDPWVDAEEARRAYD  367
            + ++++GA   V+GLTFKENCPDLRNT+V++II+EL++Y ++V V D   D +EA++ ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IRPLDSPPASAYDGIILAVAHHQFRSMGAPGIRRFGKPGHVLYDLKYLLKPDEADL  423
            +  +D+      D +++AV+H ++      +   + K   +++D+K ++++DE ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

56) wbpO in NC_012560


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  402 bits (1513),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 219/416 (53%), Positives = 325/416 (79%), Gaps = 2/416 (0%)

Query  8    KLAIIGLGYVGLPLAVEFGKRRPVVGFDIDHARIAALEAGHDRTLEVDDHELREARQLRY  67
            ++A++GLGYVGLP+AV FG+++ V+GFDI+++RI  L    DRT EV ++ L+++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  68   SADIASLADCNFYIVTVPTPIDSHKKPDLLPLIRASETIGQVLKRGDIVVYESTVYPGAT  127
            +++   L   +F I++VPTPID H+KPDLLPL++ASET+G+V+  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEGCVPVLERVSGLAFNRDFYAGYSPERINPGDREHRITGIRKITSGSTPEVAELVDALY  187
            EE CVPVLE+ SGL   +DF+ GYSPERINPGD+ H +  I K+ SG T EV E+V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  REIIAAGTYKADSIRIAEAAKVIENTQRDLNIALVNELAVIFNRMGIDTEAVLQAAGTKW  247
              +++AG  KA SI++AEAAKVIENTQRD+NIAL+NELA+IF++++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAEAIGYHPEIILAGRRLNDGMGGYVVSQLIKAMLR  307
            NFL F+PGLVGGHCIGVDPYYLTHKA+ +G HPE+ILAGRR+ND M+ Y+ S++IK +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIQIDGARALVMGLTFKENCPDLRNTRVVDIIQELRQYNISVDVYDPWVDAEEARRAYD  367
            + ++++GA   V+GLTFKENCPDLRNT+V++II+EL++Y ++V V D   D +EA++ ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IRPLDSPPASAYDGIILAVAHHQFRSMGAPGIRRFGKPGHVLYDLKYLLKPDEADL  423
            +  +D+      D +++AV+H ++      +   + K   +++D+K ++++DE ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

57) Sulba_1881 in NC_018002


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  401 bits (1509),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 239/410 (59%), Positives = 324/410 (80%), Gaps = 10/410 (2%)

Query  3    KIAIIGLGYVGLPLAVEFSKKYSVVGFDIFQIRIDELKRGYDRTLELLEVDVKASIASGI  62
            +IA++GLGYVGLP+AV F++K  V+GFDI + RI ELK  YDRT E+ E  +K +    I
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  63   EFTTRVESLKSCNIFIVTVPTPIDKHKRPDLTPLIKASETLGKVLKKDDIVIYESTVYPG  122
            E+T+  E LK  +++I++VPTPIDKH++PDL PL+KASET+GKV+  D IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  ATEEECVPVLEKFSNLKFNKDFFCGYSPERINPGDKTHTVTKILKVTSGSTPQIAEKVDA  182
            ATEEECVPVLEK+S L   KDFF GYSPERINPGDK HT   I KV SG T ++ E V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  183  LYRSIISAGTHKASSIKVAEAAKVIENSQRDINIAFVNELSIIFNRLGIDTQEVLEAAGT  242
            +Y S+++AG HKASSIKVAEAAKVIEN+QRD+NIA++NEL+IIF++L+IDT+EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYNSEIILAGRRLNDNMGTYVASQIIKLM  302
            KWNFL F+PGLVGGHCIGVDPYYLTHKAQEVG ++E+ILAGRR+NDNM+ Y+AS++IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  IKKGHTIEGSKALVLGITFKENCPDIRNSRVIDVIKELEEFGVMIDVYDPWADAKEVAHE  362
            +K+G  ++G+   VLG+TFKENCPD+RN++VI++I EL E+G+ + V D  AD +E    
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  363  YEKDLLSSLPDFSAYGAIILAVAHQEFMA-----IDLQKQTHQVIYDIKS  407
            +  DL+ +  ++   + +++AV+H+++M      I+L K+   +++DIK+
Sbjct  361  FGLDLIDT-KELKMVDVVLFAVPHKDYMENKKDYINLVKDC-GIVFDIKG  408

58) Arnit_2571 in NC_014166


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  401 bits (1509),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 239/417 (58%), Positives = 335/417 (81%), Gaps = 8/417 (1%)

Query  1    MSDKICVIGLGYVGLPLAHAFSEKYEVVGFDISQWRIDELSSGYDRTLELTESQVKEALE  60
            M+ +I V+GLGYVGLP+A +F++K  V+GFDI++ RI EL + YDRT E+TE+++K++  
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT--  58

Query  61   NGMKFSLNIDDIKDCNIYIVTVPTPIDKNKRPDLTPLIKASETIGKVLKKDDIVIYESTV  120
              + ++ N +D+K  ++ I++VPTPIDK+++PDL PL+KASET+GKV+  D IV+YESTV
Sbjct  59   -NIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTV  117

Query  121  YPGATEEECVPVLEKISKMKFNEDFFCGYSPERINPGDKEHTVTKILKVTSGSTPEIGKK  180
            YPGATEEECVPVLEK S +    DFF GYSPERINPGDK HT   I KV SG T E+   
Sbjct  118  YPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEI  177

Query  181  VNDLYASIITAGTHLATTIKVAEAAKVIENSQRDINIAFVNELAIIFNKLGINTNDVLEA  240
            V D+Y+S++TAG H A++IKVAEAAKVIEN+QRD+NIA++NELAIIF+KL+I+TN+VL A
Sbjct  178  VADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKA  237

Query  241  AGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQQVGYNPEIILAGRRLNDNMGIYVANQVI  300
            +GTKWNFL F+PGLVGGHCIGVDPYYLTHKAQ+VG +PE+ILAGRR+NDNM+ Y+A++VI
Sbjct  238  SGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVI  297

Query  301  KLMIKKGHKIEGSKVLVLGITFKENCPDIRNSRVIDVIEELKEFGCNVSVSDYWADNNEV  360
            K ++K+G  ++G+ V VLG+TFKENCPD+RN++VI++IEELKE+G NV+V+D  AD+NE 
Sbjct  298  KELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEA  357

Query  361  KHEYNLNLINDVNFDDYESIVMAVSHDKYKT-----LIFKNENQVIYDIKSILKNSD  412
            K  + L+LI+  ++   + ++ AV+H  Y       + + ++  +++DIK+I+++ +
Sbjct  358  KKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414

59) ELI_2699 in NC_014624


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  401 bits (1510),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 221/382 (58%), Positives = 316/382 (83%), Gaps = 0/382 (0%)

Query  13   KLSLIGLGYVGMPIAVAFSKKVDVIGFDVNAEKVRLYQKGIDPTKEVGDEAIKSCTVDFT  72
            +++++GLGYVG+P+AV+F++K  VIGFD+N  +++  ++  D T+EV ++ +K+  +++T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   NDETKLREARFHIVAVPTPVSEDKTPDLTPVEGASHTLGRNLTKGSIVVYESTVYPGVTE  132
            ++   L+ A F I+AVPTP+  ++ PDL P+  AS+T+G+ +T ++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EVCIPILEKASGLKCGKDFKVGYSPERINPGDKVHRLETIVKIVSGMDAETLDTIAKVYE  192
            E C+P+LEK SGL CGKDF VGYSPERINPGDKVH +ETI K+VSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVHRAESIKVAEAAKVIENSQRDINIAFMNELSIIFNKMGIDTQAVLKAAGTKWN  252
             VV AGVH+A SIKVAEAAKVIEN+QRD+NIA+MNEL+IIF+K++IDT+ VLKA+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFFPGLVGGHCIGVDPYYLTYKAEQLGYHSQIILSGRRINDDMGKYVAENIVKQLLRK  312
            FLNF PGLVGGHCIGVDPYYLT KA+++G H+++IL+GRRIND+M+KY+A N++K+LL++
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DISVKNARVAILGFTFKEDCPDTRNTKVIDIVKELRDYGIEPILCDPEADAEEAKREYGV  372
            ++ V+ A V +LG+TFKE+CPD RNTKVI+I+ EL++YG++  + D EAD +EAK+ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  TFTDYKDLKDIDLIVIAVAHQS  394
             + D K+LK +D++++AV+H+ 
Sbjct  364  DLIDTKELKMVDVVLFAVPHKD  385

60) Bpro_3997 in NC_007948


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  401 bits (1509),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 224/416 (54%), Positives = 324/416 (78%), Gaps = 2/416 (0%)

Query  6    LARTVAIIGLGYVGLPLAVEFGKKRKVVGFDISAARVAELQAGQDHTLEVEPEQMRKAVH  65
            + R +A++GLGYVGLP+AV FG+K+KV+GFDI+ +R+ EL+   D+T EV  ++++++ +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-N  59

Query  66   LQYTTDPAALQGCDLFIVTVPTPIDEYKRPDLTPLIKASTTIGKVLKKGDIVIYESTVYP  125
            ++YT+++  L+  D++I++VPTPID  ++PDL PL+KAS T+GKV+  + IV+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  126  GATEEDCVPVLEQYSGLKFNVDFFAGYSPERVNPGDKTHRVTTIKKVTSGSTPEVADLVD  185
            GATEE+CVPVLE+YSGL    DFF GYSPER+NPGDK H   TI KV SG T EV ++V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  186  ALYNEIVTVGTHKAPSIRVAEAAKVIENTQRDVNIALINELALIFNRLGIDTEAVLQAAG  245
             +Y+ +VT G HKA+SI+VAEAAKVIENTQRDVNIAL+NELA+IF++L+IDT+ VL+A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  246  TKWNFLPFRPGLVGGHCIGVDPYYLTHKAEAIGYHPEIILAGRRLNDSMGAYVVTQLVKA  305
            TKWNFL F+PGLVGGHCIGVDPYYLTHKA+ +G HPE+ILAGRR+ND+M+ Y+ ++++K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  306  MTKRRIHVRGARVLVMGLAFKENCPDLRNTRVVDIVRELTDYDVQADVHDPWVSVEEAQL  365
            + K+ ++V+GA V V+GL+FKENCPDLRNT+V++I+ EL +Y+++  V+D     +EA+ 
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  366  EYGITPVRQPEGGTYDAIIVAVAHEQFKAMGAAAFRALGKPEHVLFDLKYVLTASE  421
             +G+  +   E    D ++ AV+H ++       +  L K   ++FD+K ++ + E
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE  414

61) ELI_2407 in NC_014624


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  401 bits (1507),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 222/382 (59%), Positives = 316/382 (83%), Gaps = 0/382 (0%)

Query  13   KLSLVGLGYVGMPIAVAFSKKVDVIGFDVNAEKVQLYQKGIDPTKEVGDEAIKSCTVDFT  72
            ++++VGLGYVG+P+AV+F++K  VIGFD+N  +++  ++  D T+EV ++ +K+  +++T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   NDETKLREARFHIVAVPTPVSEDKTPDLTPVEGASHTLGRNLTKGSIVVYESTVYPGVTE  132
            ++   L+ A F I+AVPTP+  ++ PDL P+  AS+T+G+ +T ++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EVCIPILEKASGLKCGKDFKVGYSPERINPGDKVHRLETIVKIVSGMDAETLDTIAKVYE  192
            E C+P+LEK SGL CGKDF VGYSPERINPGDKVH +ETI K+VSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVHRAESIKVAEAAKVIENSQRDINIAFMNELSIIFNKMGIDTQAVLKAAGTKWN  252
             VV AGVH+A SIKVAEAAKVIEN+QRD+NIA+MNEL+IIF+K++IDT+ VLKA+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFFPGLVGGHCIGVDPYYLTYKAEQLGYHSQIILSGRRINDDMGKYVAENIVKQLLRK  312
            FLNF PGLVGGHCIGVDPYYLT KA+++G H+++IL+GRRIND+M+KY+A N++K+LL++
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DISVKNARVAILGFTFKEDCPDTRNTKVIDIVKELRDYGIEPILCDPEADAEEAKREYGV  372
            ++ V+ A V +LG+TFKE+CPD RNTKVI+I+ EL++YG++  + D EAD +EAK+ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  TFTDYKDLKDIDLIVIAVAHQS  394
             + D K+LK +D++++AV+H+ 
Sbjct  364  DLIDTKELKMVDVVLFAVPHKD  385

62) AOLE_19135 in NC_014259


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  401 bits (1507),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 240/418 (58%), Positives = 328/418 (79%), Gaps = 7/418 (1%)

Query  7    RIAIIGLGYVGLPLAVEFGKKGPVVGFDINQNRINELKSGQDHTLEVTPEELQKAEKLSF  66
             IA++GLGYVGLP+AV FG+K  V+GFDIN++RI+ELK+  D+T EVT + L K  ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  67   SANLADLEESNFFIVTVPTPVDQVNRPDLTPLKKASETVGQALKKGDIVVYESTVYPGAT  126
            ++N  DL  ++F+I++VPTP+D+ N+PDL PL KASETVG+ +  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPILEKISGLKFNQDFFAGYSPERINPGDKVNTLTKIKKITSGSTPEVANVVDAVY  186
            EE C+P+LEK SGL   +DFF GYSPERINPGDKV+T+  I K+ SG T EV ++V  VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  ASIITAGTHKASSIKVAEAAKVIENTQRDLNIALVNELSVIFDRIGIDTLDVLEAAGSKW  246
            +S++TAG HKASSIKVAEAAKVIENTQRD+NIAL+NEL++IFD+++IDT +VL A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIKLMLQ  306
            NFL F+PGLVGGHCIGVDPYYLTHKA+EVG HP+VILAGRRINDNMA+Y+A N IK +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  NGIDVPRAKVGVLGVTFKENCPDIRNSKVADLIKELEFWGAQVVVADPWADADEVRHEYG  366
            +G++V  A V VLG+TFKENCPD+RN+KV ++I EL   G +V V D  AD +E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  VELGTVDAQNPVDSVIVAVGHNEFRSLSANELRSYVKSEK--PVLADVKSLFDRIEMS  422
            ++L      + VD V+ AV H+++     ++ + Y++  K   ++ D+K++++  E++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYM----ENKKDYINLVKDCGIVFDIKGIINSDELN  416

63) capL in NC_020055


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1503),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 240/426 (57%), Positives = 337/426 (80%), Gaps = 7/426 (1%)

Query  13   TIAIVGLGYVGLPLAVALGRHFKVLGLDISEQRIKELREGYDRTAEVLEKDFHNF-VEFS  71
             IA+VGLGYVGLP+AV++G   KV+G+DI+E RIKEL++ YDRT EV E+ + N  +E++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  72   SDPATLKEAGVIIVAVPTPIDEARNPDLRPVVGASTMVGENMSVGSIVVYESTVYPGLTE  131
            S++  LK A+ II+AVPTPID   +PDL P++ AS  VG  ++ ++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  132  DICVPILEEKSGLEYGKDFGVGYSPERINPGDRKHTLQTIVKVVAGNNDDVVDLLEQLYS  191
            + CVP+LE  SGL  GKDF VGYSPERINPGD+ HT++TI KVV+G+  +V++++ ++YS
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  192  TVVTAGTHRASCIKVAEAAKVIENTQRDLNIALMNELSMIFDRMGIDTLDVLEAAGTKWN  251
            +VVTAG H+AS IKVAEAAKVIENTQRD+NIALMNEL++IFD+++IDT +VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  252  FLPFRPGLVGGHCIGVDPYYLTTKAEAIGHHPQVILAGRKINDSVGKFIADTTIKQMING  311
            FL F+PGLVGGHCIGVDPYYLT KA+ +GHHP+VILAGR+IND+++K+IA   IK++++ 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  312  DSKVKNARVGVLGLTFKENVPDLRNTKVVDVVDELKSFGVNVLVHDAYADPEEAVEEYGL  371
            +  V+ A V VLGLTFKEN PDLRNTKV+++++ELK +G+NV V+D  AD +EA   +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  372  KTVPFDELKDLDAVILAVSHDEYRKISLDDIKSWFR-IPENALVIDVKCFFDRKEMKDAG  430
              +   ELK +D V++AV+H +Y    +++ K  +  + + ++V+D+K +++  E+ + +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDY----MENKKDYINLVKDCGIVFDIKGIINSDEL-NVS  418

Query  431  IKYWRL  436
             + WRL
Sbjct  419  QRLWRL  424

64) SULAZ_0339 in NC_012438


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1506),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 253/427 (60%), Positives = 335/427 (79%), Gaps = 6/427 (1%)

Query  13   KIAIIGLGYVGLPLAVLFDTKYNVIGYDINPQRIKELKEGYDRTKEVEPEKLKNCQIDFT  72
            +IA++GLGYVGLP+AV F+ K +VIG+DIN  RIKELK+ YDRT+EV  +KLKN +I++T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   DNPEKISQAKVIIVTVPTPIDEYNIPDLRPILSASKTVGRYMKKGSIVVYESTVYPGLTE  132
             N+E + +A  II++VPTPID  N PDL P+L AS TVG+ +  ++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EECVPILEKESGLKWKEDFNVGYSPERVNPGDKQHTIDKIKKVVAGDTPEITEFLAKLYG  192
            EECVP+LEK SGL    DF VGYSPER+NPGDK HT++ I KVV+G+T E+ E++A +Y+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  EVITAGIHKAPDIKTAEAAKVIENTQRDLNIALMNELSIIFNKMGIDTKEVLEAASTKWN  252
             V+TAG+HKA+ IK AEAAKVIENTQRD+NIALMNEL+IIF+K++IDT+EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLRFEPGLVGGHCIGIDPYYLTFKAQAIGYHPEVILAGRRINDYMGKYVAENTVKKLIKA  312
            FL F PGLVGGHCIG+DPYYLT KAQ +G HPEVILAGRRIND M+KY+A N +K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GKPVKGNKVLILGLTFKENISDIRNTKVIDVYNELKEYGVDVYIYDPYAYPDEVKHEYGI  372
            G  V+G  V +LGLTFKEN +D+RNTKVI++ +ELKEYG++V + D  A  +E K  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELLDNIEKHTPYDAVIVAVKHKPFIEELDFKQYKKLMNNGGAPILIDVKGMYNKEKALKE  432
            +L+D  E     D V+ AV HK ++E+   K+Y +L+++ G  I++D+KG+ N +  L+ 
Sbjct  364  DLIDTKELKMV-DVVLFAVPHKDYMENK--KDYINLVKDCG--IVFDIKGIINSD-ELNV  417

Query  433  GFLYWRL  439
            +   WRL
Sbjct  418  SQRLWRL  424

65) Calni_0837 in NC_014758


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1505),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 241/409 (59%), Positives = 330/409 (81%), Gaps = 1/409 (0%)

Query  15   IAIIGLGYVGLPLAEVFDRRYNVIGFDINKNRIDELKKGYDRTKEVDSETLKKCTIDFTS  74
            IA++GLGYVGLP+A  F+ + +VIGFDIN +RI ELK+ YDRT+EV  + LK+  I++TS
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTS  64

Query  75   NPDAISKARVIIVTVPTPVDEYNIPDLRPVKSATSTVGAYMPKGAIVVYESTVYPGLTEE  134
            N++ + KA  II++VPTP+D  N PDL P+  A+ TVG  +  ++IVVYESTVYPG TEE
Sbjct  65   NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEE  124

Query  135  ECIPILEKESGYKWKKDFFVGYSPERVNPGDKLHTVDKITKVVAGDTKETLDFLSELYGG  194
            EC+P+LEK SG    KDFFVGYSPER+NPGDK+HT + ITKVV+G+T E L++++++Y++
Sbjct  125  ECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSS  184

Query  195  VITAGVHKASSIKVAEAAKVIENTQRDINIALMNELALIFDRIGISTKDVLDAAATKWNF  254
            V+TAGVHKASSIKVAEAAKVIENTQRD+NIALMNELA+IFD+++I T++VL A++TKWNF
Sbjct  185  VVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNF  244

Query  255  LRFEPGLVGGHCIGVDPYYLTFKAQALGHHPEVILSGRRINDNMGKFIAEKTVKKLIKAG  314
            L F PGLVGGHCIGVDPYYLT KAQ +GHHPEVIL+GRRINDNM+K+IA + +K L+K G
Sbjct  245  LNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQG  304

Query  315  KTVKDSKILILGLTFKENISDIRNTKVIDIINELNEYGTKTFVYDPKAYPEEVKDEYDIE  374
              V+++ + +LGLTFKEN +D+RNTKVI+II+EL+EYG +  V D  A  +E K  ++++
Sbjct  305  LEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLD  364

Query  375  LINDFKMFKPYDAVIIAVKHKEFIDFGYENIKSLMDYPVIIDVKGIFSD  423
            LI+  K +K  D V++AV HK++++   + I+ + D  +++D+KGI++ 
Sbjct  365  LIDT-KELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINS  412

66) PsycPRwf_0249 in NC_009524


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1505),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 236/415 (57%), Positives = 331/415 (80%), Gaps = 5/415 (1%)

Query  8    KIAVIGLGYVGLPLAVEFGKKNPVIGFDINQHRIEELKSGTDHTLEVSDEELAIAKQLQF  67
            +IAV+GLGYVGLP+AV FG+K+ VIGFDIN+ RI ELK+  D+T EV+++ L    ++++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-NTNIEY  62

Query  68   SSDINELAECNFYIVTVPTPIDEYKQPDLTPLIKASAAIGRVLKAGDIVVYESTVYPGAT  127
            +S+ ++L   +F I++VPTPID  ++PDL PL+KAS ++G+V+ ++ IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEVCIPELERSSGLIFNKDFFAGYSPERINPGDKEHRVTNILKVTAGSTPEVADLVDDVY  187
            EE C+P LE+ SGL+  KDFF GYSPERINPGDK H    I KV +G T EV ++V DVY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  NLVITAGTHKAPSIRVAEAAKVIENTQRDVNIALINELAVIFNKMGIDTEAVLTAAGTKW  247
            + V+TAG HKA+SI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYNPEIILAGRRLNDSMGEYVVTQLVKTMIK  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G +PE+ILAGRR+ND+M+ Y+ ++++K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KRIQVEGAKVLILGLSFKENCPDVRNTKVIDIVHELKEYNIDVDVYDPWVDADEAKQEYG  367
            + ++V+GA V +LGL+FKENCPD+RNTKVI+I++ELKEY ++V V D   D +EAK+ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IIPINDITNLESNSYDGIILAVAHDQFVEMGVEQIRALGKSSHVLYDLKYLFNSE  422
             + + D  +L     D +++AV+H +++E   + I  L K   +++D+K ++NS+
Sbjct  363  -LDLIDTKELKMV--DVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSD  413

67) Arad_4776 in NC_011985


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1505),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 231/428 (54%), Positives = 328/428 (77%), Gaps = 5/428 (1%)

Query  2    LSEKIAVIGLGYVGLPVAIALAGKFPDVVGFDIKASRVAALKAGEDDTREISPERLRESG  61
            ++ +IAV+GLGYVGLPVA++++ K   V+GFDI+ SR+  LK   D T E++ ++L+++ 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  62   LRISSDIEDLRDRDIFIVAVPTPIDRNRQPDLRPMISASRTVGKALKKGGIVVYESTVYP  121
            +  +S+ EDL+  D++I+AVPTPID++ +PDL P++ AS TVGK +  + IVVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  122  GVTEDVCGPVLAEVSGLRQGEEFHLGYSPERINPGDKEHTFERIVKVVAGDSEETLERIA  181
            G TE+ C PVL   SGL  G +F +GYSPERINPGDK HTFE I KVV+G++ E LE +A
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  182  AVYGTVVEAGIHKAPSIKVAEAAKVIENTQRDLNIALMNELSIIFEKMDIRTADVLKAAR  241
             VY++VV AG+HKA+SIKVAEAAKVIENTQRD+NIALMNEL+IIF+K+DI T +VLKA+ 
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  242  TKWNFLPFTPGLVGGHCIGVDPYYLTAKAEELGYHPEVILSGRRINDGMGAFIAQKLIKM  301
            TKWNFL F PGLVGGHCIGVDPYYLT KA+E+G HPEVIL+GRRIND M+ +IA ++IK 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  302  LVSAQKPINGARIGIFGLTFKENVPDLRNSRVPDIIRELHQFGIKPQVHDPMASHEEAEE  361
            L+     ++GA + ++GLTFKEN PDLRN++V +II EL ++G++  V+D  A  +EA  
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  362  EYGVRLAALEDFGELDAIVLAVPHKSYLADDAAEILKLLGENGVVVDVKAALERDNPWLD  421
             +G+ L    ++  +D +++AVPHK Y+ ++  + ++L+ + G+V D+K+ ++ D+  L+
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYM-ENKKDYINLVKDCGIVFDIKGIINSDE--LN  416

Query  422  -GHAVWSL  428
             ++ +W L
Sbjct  417  VSQRLWRL  424

68) Abu_0661 in NC_009850


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1504),  Expect = 8e-113, Method: Compositional matrix adjust.
 Identities = 236/414 (58%), Positives = 327/414 (79%), Gaps = 8/414 (1%)

Query  3    KICVIGLGYVGLPLAHAFSAKYEVVGFDISKWRIDELSTGYDRTLELTENQVKEAIKNGM  62
            +I V+GLGYVGLP+A +F+ K  V+GFDI+  RI EL   YDRT E+TEN++K++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  63   KFSLDINDIKDCNIYIVTVPTPIDKNKRPDLTPLIKASETVGKVLKKDDIVIYESTVYPG  122
             ++ + +D+K  ++ I++VPTPIDK+++PDL PL+KASETVGKV+  D IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  ATEEDCVPVLEKFSNLKFNVDFFCGYSPERINPGDKEHTVTKILKVTSGSTPEIAKKVNE  182
            ATEE+CVPVLEK+S L    DFF GYSPERINPGDK HT   I KV SG T E+   V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  183  LYASIITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAIIFNKLGINTNDVLAAAGT  242
            +Y+S++TAG H A++IKVAEAAKVIEN+QRD+NIA++NELAIIF+KL+I+TN+VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYNPEIILAGRRLNDNMGIYVANQVIKLM  302
            KWNFL F+PGLVGGHCIGVDPYYLTHKAQ +G +PE+ILAGRR+NDNM+ Y+A++VIK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  IKKGHKIEGSKVLVLGITFKENCPDIRNSRVIDVIEELQEFGCNIDIYDPWADAKEVEHE  362
            +K+G  ++G+ V VLG+TFKENCPD+RN++VI++IEEL+E+G N+ + D  AD +E    
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  363  YNLKLIKELNIAKYEAIVLAVAHNEFKE-----LKLKTDNNVVFDIKSILDETD  411
            + L LI   ++   + +++AV+H+++ E     ++L  D  +VFDIK+I++  +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414

69) VEA_001773 in NC_013456


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1504),  Expect = 8e-113, Method: Compositional matrix adjust.
 Identities = 240/418 (58%), Positives = 324/418 (78%), Gaps = 2/418 (0%)

Query  7    NARVGIIGLGYVGLPLAVEFGKKSPTIGFDINQDRIDELSAGRDSTLECSDNELAEAKYL  66
            N  ++++GLGYVGLP+AV FG+K   IGFDIN+ RI EL    D T E ++N L +++ +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-I  60

Query  67   SYTSSLQELKECNVYIVTVPTPIDEHKQPDLTPLIKASEALGTVVNQGDIIVYESTVYPG  126
             YTS+ ++LK  +  I++VPTPID H++PDL PL+KASE++G V+  + I+VYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  127  ATEEDCIPVVERVSGLKFNQDFFAGYSPERINPGDKEHRVTNILKVTSGSTPEVAEFVDQ  186
            ATEE+C+PV+E+ SGL   +DFF GYSPERINPGDK H    I KV SG T EV E+V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  187  LYKTIITAGTHKASSIKVAEAAKVIENTQRDVNIALINELSIIFNKLGIDTLEVLEAAGT  246
            +Y +++TAG HKASSIKVAEAAKVIENTQRDVNIAL+NEL+IIF+KL+IDT EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  247  KWNFLPFRPGLVGGHCIGVDPYYLTHKAQAVGYHPEMILAGRRLNDGMGQYVVSQLVKKM  306
            KWNFL F+PGLVGGHCIGVDPYYLTHKAQ VG HPE+ILAGRR+ND M++Y+ S+++K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  307  LKKRIHVEGANVLVMGLTFKENCPDLRNTKVVDIISELKEYNINVDVMDPWCSNDEAQHE  366
            LK+ ++V+GA V V+GLTFKENCPDLRNTKV++II ELKEY +NV V D    ++EA+  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  367  YGLTLCEKEKQGHYDAIIMAVSHNEFKEMGVEKIRTLGKPEHVLYDLKYVLDKESVDM  424
            +GL L +       D ++ AV+H+++ E   + I  L K   +++D+K +++ + +++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

70) wbpO in NC_017067


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1503),  Expect = 9e-113, Method: Compositional matrix adjust.
 Identities = 238/413 (58%), Positives = 321/413 (78%), Gaps = 8/413 (1%)

Query  2    KRIAVIGLGYVGLPLAAAFGEKREVVGFDINPKRIAELKDGIDFTREVSRDELAASSKLS  61
            + IAV+GLGYVGLP+A +FG+K+ V+GFDIN  RI ELK+  D T EV+ + L  ++++ 
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-NTNIE  61

Query  62   FTDSLDGIADCQVYIVTVPTPIDEYKSPDLTPLVKASESVGKVLKKGDIVVYESTVFPGA  121
            +T + +++   +  I++VPTPID  + PDL PL+KASE+VGKV+  + IVVYESTV+PGA
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  122  TEEVCVPVLEKMSGLKFNQDFFAGYSPERINPGDKEHRVTTIMKVTSGSTPEIADEVNDL  181
            TEE CVPVLEK SGL   +DFF GYSPERINPGDK H   TI KV SG T E+ + V D+
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  182  YAGIITAGTHKASSIKVAEAAKVIENTQRDLNIALMNELSMIFARIGIDTHEVLAAAGTK  241
            Y++++TAG HKASSIKVAEAAKVIENTQRD+NIALMNEL++IF +++IDT+EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  242  WNFLPFKPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRVNDNMGPYAAAELVKAMI  301
            WNFL FKPGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+NDNM+ Y A++++K ++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  302  KRGHTIANSRVLVMGLTFKENCPDLRNTRVIDVVNELKDFGCQVDVTDCWANNEEAEHEY  361
            K+G  +  + V V+GLTFKENCPDLRNT+VI++++ELK++G +V V D  A+++EA   +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  362  GISLVPEPKAGEYDAVFLAVPHREYTALSAEQLRAYTN---SNGVLFDLKGVL  411
            G+ L+        D V++AVPH++Y     E+ + Y N     G++FD+KG++
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYM----ENKKDYINLVKDCGIVFDIKGII  410

71) ugd in NC_020547


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1503),  Expect = 9e-113, Method: Compositional matrix adjust.
 Identities = 235/416 (57%), Positives = 326/416 (79%), Gaps = 2/416 (0%)

Query  7    RIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIDELKSGQDHTLEVTPEELKQASYLSY  66
             IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELK+  D+T EVT + LK+++ + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  67   TANLEELKDCNFYIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDIVVYESTVYPGAT  126
            T+N E+LK  +F I++VPTPID  ++PDL PL+KAS ++G+V+  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKFNQDFFAGYSPERINPGDKLHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK+H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIKAGTHKAPSIKVAEAAKVIENTQRDVNIALINELALIFNKLGIDTEQVLKAAGTKW  246
            + ++ AG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+KL+IDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGAYVVTQLVKGMIK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ ++++K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KKIQVEGSKVLVLGLSFKENCPDIRNTKVIDIVKELEEYHMDVDVYDPWIDSEETQHEYG  366
            + ++V+G+ V VLGL+FKENCPD+RNTKVI+I+ EL EY ++V V D   D +E++  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVKQPKAGQYDAVILAVAHNEFKEMGIEAIRSLGKASHVLYDLKYVLDQSESDI  422
            +  +        D V++AV+H+++ E   + I +L K   +++D+K +++  E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

72) ABTJ_03761 in NC_017847


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  400 bits (1503),  Expect = 9e-113, Method: Compositional matrix adjust.
 Identities = 235/416 (57%), Positives = 326/416 (79%), Gaps = 2/416 (0%)

Query  7    RIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIDELKSGQDHTLEVTPEELKQASYLSY  66
             IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELK+  D+T EVT + LK+++ + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  67   TANLEELKDCNFYIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDIVVYESTVYPGAT  126
            T+N E+LK  +F I++VPTPID  ++PDL PL+KAS ++G+V+  + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKFNQDFFAGYSPERINPGDKLHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK+H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIKAGTHKAPSIKVAEAAKVIENTQRDVNIALINELALIFNKLGIDTEQVLKAAGTKW  246
            + ++ AG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+KL+IDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGAYVVTQLVKGMIK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ ++++K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KKIQVEGSKVLVLGLSFKENCPDIRNTKVIDIVKELEEYHMDVDVYDPWIDSEETQHEYG  366
            + ++V+G+ V VLGL+FKENCPD+RNTKVI+I+ EL EY ++V V D   D +E++  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVKQPKAGQYDAVILAVAHNEFKEMGIEAIRSLGKASHVLYDLKYVLDQSESDI  422
            +  +        D V++AV+H+++ E   + I +L K   +++D+K +++  E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

73) VEJY3_01090 in NC_016613


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1501),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 234/386 (61%), Positives = 309/386 (81%), Gaps = 1/386 (0%)

Query  21   KIGIIGLGYVGLPLAVEFGKKSPTIGFDINQSRIDELSAGRDSTLECSDNELAEAKYLSY  80
            +I+++GLGYVGLP+AV FG+K   IGFDIN+SRI EL    D T E ++N L +++ + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  81   TSSLQELKQCNVYIVTVPTPIDEHKQPDLTPLIKASEALGSVVSQGDVIIYESTVYPGAT  140
            TS+ ++LK+ +  I++VPTPID H++PDL PL+KASE++G V++ + +++YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  141  EEDCIPVVERVSGLKFNQDFFAGYSPERINPGDKEHRVTNILKVTSGSTPEVAEFVDQLY  200
            EE+C+PV+E+ SGL   +DFF GYSPERINPGDK H    I KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  201  KSIITAGTHKASTIKVAEAAKVIENTQRDVNIALINELSIIFNKLDIDTLEVLEAAGTKW  260
             S++TAG HKAS+IKVAEAAKVIENTQRDVNIAL+NEL+IIF+KLDIDT EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  261  NFLPFRPGLVGGHCIGVDPYYLTHKAQTVGYHPEMILAGRRLNDGMGQYVVSQLVKKMLK  320
            NFL F+PGLVGGHCIGVDPYYLTHKAQ VG HPE+ILAGRR+ND M++Y+ S+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  321  MRIHVEGANVLVMGLTFKENCPDLRNTKVVDIISELKEYNINVDVMDPWCSNDEAQHEYG  380
              ++V+GA V V+GLTFKENCPDLRNTKV++II ELKEY +NV V D    ++EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  381  LTLCEKEKQGHYDAIIMAVSHNEFKQ  406
            L L +       D ++ AV+H+++ +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME  388

74) wbpA in NC_004347


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1501),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 239/419 (58%), Positives = 329/419 (79%), Gaps = 2/419 (0%)

Query  6    VNAKIGIIGLGYVGLPLAVEFGKQRLTIGFDINQARINELSAGHDSTLECSDTELAEAKK  65
            +N +I+++GLGYVGLP+AV FG+++  IGFDIN++RI+EL    D T E ++  L +++ 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-  59

Query  66   LVYTTSLEALKECNVFIVTVPTPIDEHKQPDLTPLIKASETLGKVIKHGDVIIYESTVYP  125
            + YT++ E LK  + +I++VPTPID H++PDL PL+KASET+GKVI  + +++YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  126  GATEEECIPVVEQVSGLKFNQDFFAGYSPERINPGDKEHRVTNILKVTSGSTPEVAEYVD  185
            GATEEEC+PV+E+ SGL   +DFF GYSPERINPGDK H    I KV SG T EV E V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  186  QLYKSIIVAGTHKASSIKVAEAAKVIENTQRDVNIALINELSIIFNKLGIDTLEVLEAAG  245
            ++Y S++ AG HKASSIKVAEAAKVIENTQRDVNIAL+NEL+IIF+KL+IDT EVL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  246  TKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSVGYHPEMILAGRRLNDGMGQYVVSQLVKK  305
            TKWNFL F+PGLVGGHCIGVDPYYLTHKAQ VG HPE+ILAGRR+ND M++Y+ S+++K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  306  MLKKRIHVEGANVLVMGLTFKENCPDLRNTKVVDIVRELKEYNINVDIVDPWCESHEAEQ  365
            +LK+ ++V+GA V V+GLTFKENCPDLRNTKV++I+ ELKEY +NV + D   + +EA +
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  366  EYGLTLCGQPKVNHYDAIIIAVSHNEFRAMGAEAIRALGKPEHVLYDLKYVLNKESVDM  424
             +GL L +   ++  D +++AV+H+++     + I  L K   +++D+K ++N + +++
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

75) wbpO in NC_019382


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1501),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 237/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  12   HLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  71
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  72   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  131
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  191
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  251
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  311
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  371
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  ITPVAKPAAGAYDAVILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLPPEQADL  427
            +  +        D V++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

76) wbpO in NC_018518


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1502),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 236/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  12   HLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  71
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  72   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  131
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  191
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  251
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  311
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  371
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  ITPVAKPAAGAYDAIILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPEQADL  427
            +  +        D +++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

77) wbpO in NC_017223


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1502),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 236/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  12   HLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  71
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  72   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  131
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  191
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  251
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  311
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  371
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  ITPVAKPAAGAYDAIILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPEQADL  427
            +  +        D +++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

78) wbpO in NC_002929


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1502),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 236/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  12   HLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  71
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  72   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  131
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  191
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  251
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  311
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  371
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  ITPVAKPAAGAYDAIILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPEQADL  427
            +  +        D +++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

79) Maqu_2609 in NC_008740


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1501),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 238/420 (57%), Positives = 325/420 (78%), Gaps = 8/420 (1%)

Query  2    KKIAVVGLGYVGLPLAAAFGEKREVVGFDINAKRIAELKDGVDFTREVSSEELATSRYLS  61
            ++IAVVGLGYVGLP+A +FG+K+ V+GFDIN  RI ELK+  D T EV+ + L  +  + 
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IE  61

Query  62   FTDSLDGIADCQIYIVTVPTPIDEYKSPDLTPLVKASESVGKVLKKGDIVIYESTVFPGA  121
            +T + +++   ++ I++VPTPID  + PDL PL+KASE+VGKV+  + IV+YESTV+PGA
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  122  TEEVCVPVLEKMSGLKFNQDFFAGYSPERINPGDKEHRVTTIMKVTSGSTPEIADEVNNL  181
            TEE CVPVLEK SGL   +DFF GYSPERINPGDK H   TI KV SG T E+ + V ++
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  182  YADIITAGTHKASSIKVAEAAKVIENTQRDLNIALMNELSMIFARIGIDTHEVLAAAGTK  241
            Y+ ++TAG HKASSIKVAEAAKVIENTQRD+NIALMNEL++IF +++IDT+EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  242  WNFLPFKPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRVNDNMGPYAAAELVKAMI  301
            WNFL FKPGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+NDNM+ Y A++++K ++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  302  KKGHTIANSRVLVMGLTFKENCPDLRNTRVIDVVNELKDFGCQVDVTDCWANNEEAEHEY  361
            K+G  +  + V V+GLTFKENCPDLRNT+VI++++ELK++G +V V D  A+++EA   +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  362  GISLVPEPKAGEYDAVFLAVPHREYAALSAEQLRAYTN---GNGVLFDLKGVLPLGEADL  418
            G+ L+        D V++AVPH++Y     E+ + Y N   + G++FD+KG++  +E ++
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDY----MENKKDYINLVKDCGIVFDIKGIINSDELNV  417

80) ACIAD0087 in NC_005966


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1502),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 325/416 (79%), Gaps = 2/416 (0%)

Query  13   RIAIIGLGYVGLPLAVEFGKHVSVVGFDIHQKRVAELQQGQDHTLEVTPEELKQAQLLSY  72
             IA++GLGYVGLP+AV FG+   V+GFDI++ R+ EL++  D+T EVT + LK++++  Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EY  62

Query  73   SCDLSDLKDCNFFIVTVPTPIDQFKQPDLTPLIKASQSIGKVLKKDDIVVYESTVYPGAT  132
            + +  DLK  +F+I++VPTPID+ ++PDL PL+KAS+++GKV+  D IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPVLEQVSGLTFNQDFFTGYSPERINPGDKAHRVTNILKITAGSTPEVADYVDAVY  192
            EE CVPVLE+ SGL   +DFF GYSPERINPGDK H    I K+ +G T EV + V  VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  QLIIEVGTHKAPSIKVAEAAKVIENTQRDVNIALINELAIIFNKMGIDTQDVLEAAGTKW  252
              ++  G HKA+SIKVAEAAKVIENTQRDVNIAL+NELAIIF+K++IDT++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDNMSMYVANQLIKSMNK  312
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+NDNM+ Y+A+++IK + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  KRIQIEDAKVLILGLTFKENCPDIRNTKIVDIISELKDFNMQVDVYDPWADAEETRHEYA  372
            + +++++A V +LGLTFKENCPD+RNTK+++II ELK++ ++V V D  AD +E++  ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  IDLIAEPAQGSYDAIILAVAHQQFKAMGAAAIHALGRSNHVIYDLKYVLDRQQSDI  428
            +DLI        D +++AV+H+++       I+ L +   +++D+K +++ ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSDELNV  417

81) ACICU_00074 in NC_010611


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1502),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 329/416 (80%), Gaps = 2/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIDELKNGQDHTLEVSPEELKQAVHLKY  66
            +IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELKN  D+T EV+ + LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TAHLDDLQNSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYESTVYPGAT  126
            T++ +DL++++F+I++VPTPID  ++PDL PL+KAS ++G+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKFNQDFFAGYSPERINPGDKQHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPNIKVAEAAKVIENTQRDVNIALINELALIFNKLDIDTEDVLKAAGTKW  246
            + ++ AG HKA++IKVAEAAKVIENTQRDVNIAL+NELA+IF+KLDIDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQLIKEMVK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+  +A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTEVQHEYG  366
            Q ++V GA + V+GL+FKENCPD+RNTK++++I  LKEY+L++ + D   D  E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LAPIKELQQGLYDAIVIAVAHNQFKSMSAHEFHALGKEKHVLYDLKYVLDKSETDI  422
            L  I   +  + D +++AV+H+++   +  ++  L K+  +++D+K +++  E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

82) Varpa_4689 in NC_014931


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1501),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 234/418 (56%), Positives = 326/418 (78%), Gaps = 7/418 (1%)

Query  9    NQPIAIIGLGYVGLPLAVEFGKKRQVVGFDINAKRIAELQNGQDHTLETTPEELKAAAQL  68
            N+ IA++GLGYVGLP+AV FG+K++V+GFDIN  RI EL+N  D+T E T + LK + ++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NI  60

Query  69   AFTSHLDDLRDCGVFIVTVPTPIDNANRPDLTPLIKASESVGKVMKPGAIVIFESTVYPG  128
             +TS+ +DL+  + +I++VPTPID+ N+PDL PL+KASE+VGKV+ P++IV++ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  129  ATEEVCVPVLEKFSGKKFNVDFFCGYSPERINPGDKVNTLTKIKKITSGSTPEVADLVDA  188
            ATEE CVPVLEK+SG     DFF GYSPERINPGDKV+T+  I K+ SG T EV ++V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  189  LYNEIITAGTHKATSLKVAEAAKVIENTQRDLNIALVNELSVIFERLGIDTLDVLEAAGS  248
            +Y+ ++TAG HKA+S+KVAEAAKVIENTQRD+NIAL+NEL++IF++L+IDT +VL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  249  KWNFLPFRPGLVGGHCIGVDPYYLTHKAEQVGYHPQVILAGRRINDNMARYVARNTIKLM  308
            KWNFL F+PGLVGGHCIGVDPYYLTHKA++VG HP+VILAGRRINDNMA+Y+A N IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  309  LKNGMDVPRCRIGVLGITFKENCPDIRNSKIVDMVREFEAWGASVEVVDPWAEAEEVARE  368
            LK+G++V    + VLG+TFKENCPD+RN+K+++++ E+   G +V V D  A+ +E  + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  369  YGLQLGKVDADHPVDALVVAVGHNEYRGAAMS--ELRALCRGEQPVLVDVKSLFNAQE  424
            +GL+L        VD ++ AV H++Y        +L   C     ++ D+K+++N++E
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDC----GIVFDIKGIINSDE  414

83) Swoo_1654 in NC_010506


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1500),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 240/416 (58%), Positives = 324/416 (78%), Gaps = 2/416 (0%)

Query  9    KIGIIGLGYVGLPLAVEFGKKSPTIGFDINEGRISELSYGHDSTLECSHQELAEATCLRY  68
            +I+++GLGYVGLP+AV FG+K   IGFDINE+RI EL    D T E +++ L ++  + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  69   TASLSDLKECNVYIVTVPTPIDEHKQPDLTPLVKASEALGAVVSEGDIIIYESTVYPGAT  128
            T++  DLK  +  I++VPTPID H++PDL PL+KASE++G V++ + I++YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  129  EEECISVVEKVSGLKFNQNFFAGYSPERINPGDKEHRVTNILKVTSGSTPEVAEFVDQLY  188
            EEEC++V+EK SGL   ++FF GYSPERINPGDK H    I KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  189  KSIIVAGTHKASSIKVAEAAKVIENTQRDVNIALINELSIIFNKLDIDTLEVLEAAGTKW  248
             S++ AG HKASSIKVAEAAKVIENTQRDVNIAL+NEL+IIF+KLDIDT EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  249  NFLPFRPGLVGGHCIGVDPYYLTHKAQTVGYHPEMILAGRRLNDGMGQYVVSQLVKKMLK  308
            NFL F+PGLVGGHCIGVDPYYLTHKAQ VG HPE+ILAGRR+ND M++Y+ S+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  309  KRLHVEGANVLVMGLTFKENCPDLRNTKVVDIVSELKEYNINVDIVDPWCSNDEAEHEYG  368
            + L+V+GA V V+GLTFKENCPDLRNTKV++I+ ELKEY +NV + D    ++EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  369  LSLCEKPKANNYDAIIMAVAHNEFREMGAEKIHVLGKTEHVLYDLKYILDKESVDM  424
            L L +    +  D ++ AV+H+++ E   + I+ L K   +++D+K I++ + +++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSDELNV  417

84) SCD_n01334 in NC_022357


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1500),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 242/423 (58%), Positives = 326/423 (78%), Gaps = 3/423 (0%)

Query  4    VAVVGLGYVGLPLAVEFGKKIETIGFDLSSEKVESYKRFCDPTGEMSGDDLRAATQLTLT  63
            +AVVGLGYVGLP+AV FG+K   IGFD++  ++   K   D T E++ + L+  T++  T
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYT  63

Query  64   TDPALIGKADYIIVAVPTPVDKAHQPDFSPLVSSSTSVGRHMKKGAIVIYESTVYPGATE  123
            +++  + KAD+II+AVPTP+DK ++PD+ PL+ +S +VG+ +  ++IV+YESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  124  EICVPILEKESGLKWKQDFHIGYSPERINPGDKEHTVTKILKVVSGDDAESLEKVAQLYE  183
            E CVP+LEK SGL   +DF +GYSPERINPGDK HT   I KVVSG+  E LE VA++Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  184  MVIIAGVHRASSIKVAEAAKVIENTQRDLNIALMNELAIIFDKLGIDTLEVLQAAGTKWN  243
             V+ AGVH+ASSIKVAEAAKVIENTQRD+NIALMNELAIIFDKL+IDT EVL+A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  244  FLPFRPGLVGGHCIGVDPYYLTHKADMLGYIPQVILAGRRINDGMGKFIAEQTVKQMIQA  303
            FL F+PGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+K+IA + +K++++ 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  304  GSHVKGAKVIVLGLTFKENCGDLRNSKVIDIINELKTYGIEVLVHEPIGDASEAKHEYGV  363
            G +V+GA V VLGLTFKENC DLRN+KVI+II+ELK YG++V V++  +D +EAK  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  364  SLTAWDKLPQADAIVAAVAHKEFLERPLSDFLTKLKPGGAFIDVKSAYDSKALRDAGLTV  423
             L     L   D ++ AV+HK+++E    D++  +K  G  +D+K+  +S  L + +  +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDEL-NVSQRL  421

Query  424  WRL  426
            WRL
Sbjct  422  WRL  424

85) wbpO in NC_018518


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1500),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 236/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  7    KLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  66
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  67   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  126
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  186
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  246
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  366
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVAKPAAGAYDAIILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPEQADL  422
            +  +        D +++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

86) wbpO in NC_017223


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1500),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 236/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  7    KLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  66
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  67   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  126
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  186
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  246
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  366
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVAKPAAGAYDAIILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPEQADL  422
            +  +        D +++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

87) wbpO in NC_002929


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1500),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 236/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  7    KLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  66
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  67   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  126
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  186
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  246
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  366
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVAKPAAGAYDAIILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPEQADL  422
            +  +        D +++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

88) BJAB07104_00090 in NC_021726


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  399 bits (1500),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 231/416 (56%), Positives = 329/416 (80%), Gaps = 2/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKKVSVVGFDIYQKRIDELKNGQDHTLEVSPEELKQAVRLTY  66
            +IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELKN  D+T EV+ + LK++  + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TAHLNDLQDSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYESTVYPGAT  126
            T++ +DL+ ++F+I++VPTPID  ++PDL PL+KAS ++G+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKFNQDFFVGYSPERINPGDKQHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFFVGYSPERINPGDK H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  KLIIEAGTHKAPSIKVAEAAKVIENTQRDVNIALINELALIFNKLGIDTEEVLKAAGTKW  246
              ++ AG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+KL+IDT+EVLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQLIKEMVK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+  +A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTEVQHEYG  366
            Q ++V GA + V+GL+FKENCPD+RNTK++++I  LKEY+L++ + D   D  E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LAPIKELQQGLYDAIVIAVAHNQFKSMSAQEFHALGKEKHVLYDLKYVLSQNESSI  422
            L  I   +  + D +++AV+H+++   + +++  L K+  +++D+K +++ +E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

89) swp_1575 in NC_011566


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1499),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 245/414 (60%), Positives = 334/414 (81%), Gaps = 2/414 (0%)

Query  7    DTKIAIIGLGYVGLPLAVEFGKTRNVIGFDINQQRVNELSDRHDFTLECSSEELAEAKFL  66
            + +IA++GLGYVGLP+AV FG+ ++VIGFDIN+ R++EL +  D T E + + L +++ +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-I  60

Query  67   HYTSNLEQLKQCNVYIVTVPTPIDDHKRPDLTPLIKASESLGKVITKGDIVIYESTVYPG  126
            +YTSN E+LK+ +  I++VPTPID H++PDL PL+KASE++GKVIT + IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  127  ATEEDCIPVLERVSGLTFNKDFFAGYSPERINPGDKEHRVTTIKKVTAGSTPEVADFVDA  186
            ATEE+C+PVLE+ SGL   KDFF GYSPERINPGDK H   TI KV +G T EV ++V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  187  LYGTIIVAGTHKASSIKVAEAAKVIENTQRDlnialinelaliFNKLDIDTEEVLKAAGT  246
            +Y++++ AG HKASSIKVAEAAKVIENTQRD+NIAL+NELA+IF+KLDIDT+EVLKA+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  247  KWNFLPFRPGLVGGHCIGVDPYYLTYKAESIGYHPEVILAGRRINDNMASYVASQLVKAM  306
            KWNFL F+PGLVGGHCIGVDPYYLT KA+ +G HPEVILAGRRINDNMA Y+AS+++K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  307  LKKGIQVKGANVLLMGLTFKENCPDLRNTKVVDIITELNEYNVNVDVYDPWVNPTEAKHE  366
            LK+G++V+GA V ++GLTFKENCPDLRNTKV++II EL+EY +NV V D   +  EAK  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  367  YGIEVLAEKPAATYDGMVMAVAHDEFKAMTQVELKSLTNAESIIYDLKYILSAE  420
            +G++++  K     D ++ AV+H ++    + +  +L +  +I++D+K I++++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKK-DYINLVKDCGIVFDIKGIINSD  413

90) Vapar_1926 in NC_012791


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1497),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 231/390 (60%), Positives = 309/390 (80%), Gaps = 1/390 (0%)

Query  5    NSKIAVIGLGYVGLPLAVEFGKKRDVVGFDINPKRIAELRVGRDHTLETTPEELKAASRL  64
            N +IAV+GLGYVGLP+AV FG+K+ V+GFDIN  RI EL+   D+T E T + LK ++ +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-I  60

Query  65   AFSSDLADLRDCEIFIVTVPTPIDNANRPDLTPLIKASETVGKVMPAGAIVIYESTVYPG  124
             ++S+  DL+  +++I++VPTPID+ N+PDL PL+KASETVGKV+ +++IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  ATEEVCVPVLEKHSGQKFNVDFFCGYSPERINPGDKVNTLTKIKKITSGSTPKVAQIVDR  184
            ATEE CVPVLEK SG     DFF GYSPERINPGDKV+T+  I K+ SG T  V +IV  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYAEIITAGTYRASSIKVAEAAKVIENTQRDLNIALVNELSVIFDRLGIDTLDVLEAAGS  244
            +Y+ ++TAG  +ASSIKVAEAAKVIENTQRD+NIAL+NEL++IFD+L+IDT +VL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLPFRPGLVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIKHM  304
            KWNFL F+PGLVGGHCIGVDPYYLTHKA+EVG HP+VILAGRRINDNMA+Y+A N IK++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  LRNGMDVPRCRVGVLGITFKENCPDIRNSKIVDMVREFETWGVQVVVADPWADSAEVAHE  364
            L++G++V    V VLG+TFKENCPD+RN+K+++++ E+   G++V V D  AD  E    
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGLQLGAVDSEHLVDALVVAVGHNEYRQTN  394
            +GL+L       +VD ++ AV H++Y + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK  390

91) wbpO in NC_002928


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1497),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 238/416 (58%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  40   KLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELAQAGQLSY  99
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L ++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  100  TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  159
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  160  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  219
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  220  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  279
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  280  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  339
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  340  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  399
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  400  ITPVAKPAAGAYDAVILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPDQADL  455
            +  +        D V++AV+H +++E   + I ++ K   I++D+K ++ +D+ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

92) wbpO in NC_002928


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1496),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 238/416 (58%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  12   HLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELAQAGQLSY  71
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L ++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  72   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  131
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  191
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  251
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  311
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  371
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  ITPVAKPAAGAYDAVILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPDQADL  427
            +  +        D V++AV+H +++E   + I ++ K   I++D+K ++ +D+ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

93) BJAB0715_00093 in NC_021733


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1497),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIEELKNGQDHTLEVSPEELKQAVHLNY  66
            +IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELKN  D+T EV+ + LK++ +++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TAHLDDLQDSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYESTVYPGAT  126
            T++ +DL+ ++F+I++VPTPID  ++PDL PL+KAS ++G+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKFNQDFFAGYSPERINPGDKQHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPNIKVAEAAKVIENTQRDVNIALINELALIFNKLDIDTEDVLKAAGTKW  246
            + ++ AG HKA++IKVAEAAKVIENTQRDVNIAL+NELA+IF+KLDIDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQLIKEMVK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+  +A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTEVQHEYG  366
            Q ++V GA + V+GL+FKENCPD+RNTK++++I  LKEY+L++ + D   D  E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LAPIKELQQGLYDAIVIAVAHNQFKSMSVEEFHALGKEKHVLYDLKYVLDKESSNI  422
            L  I   +  + D +++AV+H+++      ++  L K+  +++D+K +++ +  N+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNV  417

94) ABZJ_00077 in NC_017171


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1497),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIEELKNGQDHTLEVSPEELKQAVHLNY  66
            +IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELKN  D+T EV+ + LK++ +++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TAHLDDLQDSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYESTVYPGAT  126
            T++ +DL+ ++F+I++VPTPID  ++PDL PL+KAS ++G+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKFNQDFFAGYSPERINPGDKQHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPNIKVAEAAKVIENTQRDVNIALINELALIFNKLDIDTEDVLKAAGTKW  246
            + ++ AG HKA++IKVAEAAKVIENTQRDVNIAL+NELA+IF+KLDIDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQLIKEMVK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+  +A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTEVQHEYG  366
            Q ++V GA + V+GL+FKENCPD+RNTK++++I  LKEY+L++ + D   D  E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LAPIKELQQGLYDAIVIAVAHNQFKSMSVEEFHALGKEKHVLYDLKYVLDKESSNI  422
            L  I   +  + D +++AV+H+++      ++  L K+  +++D+K +++ +  N+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNV  417

95) BJAB0868_00092 in NC_021729


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1496),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIDELKNGQDHTLEVSPEELKQAVHLKY  66
            +IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELKN  D+T EV+ + LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TAHLDDLQDSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYESTVYPGAT  126
            T++ +DL+ ++F+I++VPTPID  ++PDL PL+KAS ++G+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKISGLKFNQDFFAGYSPERINPGDKQHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPNIKVAEAAKVIENTQRDVNIALINELALIFNKLDIDTEDVLKAAGTKW  246
            + ++ AG HKA++IKVAEAAKVIENTQRDVNIAL+NELA+IF+KLDIDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQLIKEMVK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+  +A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTEVQHEYG  366
            Q ++V GA + V+GL+FKENCPD+RNTK++++I  LKEY+L++ + D   D  E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LAPIKELQQGLYDAIVIAVAHNQFKSMSVEEFHALGKEKHVLYDLKYVLDKESSNI  422
            L  I   +  + D +++AV+H+++      ++  L K+  +++D+K +++ +  N+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNV  417

96) ABSDF0066 in NC_010400


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1496),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIDELKNGQDHTLEVSPEELKQAVHLKY  66
            +IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELKN  D+T EV+ + LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TAHLDDLQDSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYESTVYPGAT  126
            T++ +DL+ ++F+I++VPTPID  ++PDL PL+KAS ++G+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKISGLKFNQDFFAGYSPERINPGDKQHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPNIKVAEAAKVIENTQRDVNIALINELALIFNKLDIDTEDVLKAAGTKW  246
            + ++ AG HKA++IKVAEAAKVIENTQRDVNIAL+NELA+IF+KLDIDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQLIKEMVK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+  +A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTEVQHEYG  366
            Q ++V GA + V+GL+FKENCPD+RNTK++++I  LKEY+L++ + D   D  E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LAPIKELQQGLYDAIVIAVAHNQFKSMSVEEFHALGKEKHVLYDLKYVLDKESSNI  422
            L  I   +  + D +++AV+H+++      ++  L K+  +++D+K +++ +  N+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNV  417

97) ABTW07_0082 in NC_017387


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  398 bits (1496),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIDELKNGQDHTLEVSPEELKQAVHLKY  66
            +IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELKN  D+T EV+ + LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TAHLDDLQDSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYESTVYPGAT  126
            T++ +DL+ ++F+I++VPTPID  ++PDL PL+KAS ++G+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKISGLKFNQDFFAGYSPERINPGDKQHRVTNILKITSGSTPEVADYIDEVY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK H    I K+ SG T EV + + +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPNIKVAEAAKVIENTQRDVNIALINELALIFNKLDIDTEDVLKAAGTKW  246
            + ++ AG HKA++IKVAEAAKVIENTQRDVNIAL+NELA+IF+KLDIDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQLIKEMVK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+  +A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTEVQHEYG  366
            Q ++V GA + V+GL+FKENCPD+RNTK++++I  LKEY+L++ + D   D  E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LAPIKELQQGLYDAIVIAVAHNQFKSMSVEEFHALGKEKHVLYDLKYVLDKESSNI  422
            L  I   +  + D +++AV+H+++      ++  L K+  +++D+K +++ +  N+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNV  417

98) wbpO in NC_002927


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1495),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 237/416 (57%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  12   HLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELAQAGQLSY  71
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L ++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  72   TAEREELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  131
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  191
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  251
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  311
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  371
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  ITPVAKPAAGAYDAVILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLPPEQADL  427
            +  +        D V++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

99) DvMF_2494 in NC_011769


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1495),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 241/429 (57%), Positives = 329/429 (77%), Gaps = 7/429 (1%)

Query  11   ESPVAVVGLGYVGLPLAVALARRFDVIGFDISRGRVDELTAGHDRTGEVADADLAATTAR  70
            +  +AVVGLGYVGLP+AV+++ +  VIGFDI+ +R+ EL    DRT EV++  L  T   
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  71   FTCDgaalaaagviivavPTPIDNHRNPDLTPVEKASTTVGRHMSRGCVVVYESTVYPGV  130
            +T ++  L  A+ II+AVPTPID+H +PDL P+ KAS TVG+ ++ + +VVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  131  TEDVCVPILERESGLAFGRDFTVGYSPERINPGDKVHTLETIMKVVSGSDAPTLDLLADL  190
            TE+ CVP+LE+ SGL  G+DF VGYSPERINPGDKVHT+ETI KVVSG     L+++AD+
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  191  YGSVVTAGVHRAASIKVAEAAKVIENTQRDLNIALMNELSLIFDRLGIDTLEVLEAAGTK  250
            Y+SVVTAGVH+A+SIKVAEAAKVIENTQRD+NIALMNEL++IFD+L+IDT EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  251  WNFLPFRPGLVGGHCIGVDPYYLTFKAEELGYHPQVILAGRRINDGMGKHVAETAVKQMI  310
            WNFL F+PGLVGGHCIGVDPYYLT KA+E+G HP+VILAGRRIND M+K +A   +K+++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  311  KAGCRVDGARVGILGLTFKEDVPDLRNTRVVDVVAELREYGVTVLVHDPMAEAAEARHEY  370
            K G  V+GA V +LGLTFKE+ PDLRNT+V++++ EL+EYG+ V V+D  A+  EA+  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  371  GLDLASLDDFTRLDALILAVGHKAYRAVPLSAMRGWFA-TPDRALLLDLKGLHDAQAAQE  429
            GLDL    ++  +D +++AV HK Y    +   ++ +    D ++++D+KG+ +++  + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDY----MENKKDYINLVKDCGIVFDIKGIINSDELNV  417

Query  430  AGFFAYWRL  438
            +     WRL
Sbjct  418  SQ--RLWRL  424

100) ABK1_0085 in NC_017162


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1495),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 228/416 (55%), Positives = 328/416 (79%), Gaps = 2/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIDELKNGQDHTLEVSPEELKQAVHLKY  66
            +IA++GLGYVGLP+AV FG+K  V+GFDI + RI ELKN  D+T EV+ + LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TAHLDDLQDSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYESTVYPGAT  126
            T++ +DL+ ++F+I++VPTPID  ++PDL PL+KAS ++G+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKFNQDFFAGYSPERINPGDKQHRVTNILKITSGSTPDVADYVDEIY  186
            EE C+PVLEK SGL   +DFF GYSPERINPGDK H    I K+ SG T +V + V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NLIIEAGTHKAPSIKVAEAAKVIENTQRDVNIALINELALIFNKLGVDTEEVLKAAGTKW  246
            + ++ AG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+KL++DT+EVLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQLIKEMVK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+  +A+++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTEVQHEYG  366
            Q ++V GA + V+GL+FKENCPD+RNTK++++I  LKEY+L++ + D   D  E +  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LAPIKELQQGLYDAIVIAVAHNQFKSMSAHEFHALGKEKHVLYDLKYVLDKSETDI  422
            L  I   +  + D +++AV+H+++   +  ++  L K+  +++D+K +++  E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

101) wbpO in NC_010170


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1494),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 239/413 (58%), Positives = 324/413 (79%), Gaps = 2/413 (0%)

Query  7    KLAVVGLGYVGLPLAVEFGKKRPVIGFDINVKRIDALKAGHDHTLEVDDAELAEAKHLTY  66
            ++AVVGLGYVGLP+AV FG+K+ VIGFDIN  RI  LK   D+T EV +  L ++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TADRAELAKANVYIVTVPTPIDDYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  126
            T++  +L KA+  I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLERVSGLKFNEDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVADLVDTLY  186
            EE+CVPVLE+ SGL    DF+ GYSPERINPGDK H  +TI KV SG T EV ++V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  246
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGSYVVSQLVKCMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  QRIHVQGARVLVMGLTFKENCPDLRNTRVVDIVNELGEYNvdvdvydpwvdpEEARHEYD  366
            Q ++VQGA V V+GLTFKENCPDLRNT+V++I++EL EY ++V V D   D +EA+  ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVAQPEAGKYDAIILAVSHHQFVEMGAAAIRKLGKAQHVLYDLKYVLSSDE  419
            +  +   E    D +++AV+H +++E     I +L K   +++D+K +++SDE
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

102) wbpO in NC_018829


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1494),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 235/416 (57%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  40   KLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  99
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  100  TAERADLAQANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  159
            T++  DL +A+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  160  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  219
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  220  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  279
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  280  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  339
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  340  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  399
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  400  ITPVAKPAAGAYDAIILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPEQADL  455
            +  +        D +++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

103) wbpO in NC_018828


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1494),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 237/416 (57%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  40   KLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  99
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  100  TAERADLAQANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  159
            T++  DL +A+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  160  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  219
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  220  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  279
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  280  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  339
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  340  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  399
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  400  ITPVAKPAAGEYDAVILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPDQADL  455
            +  +        D V++AV+H +++E   + I ++ K   I++D+K ++ +D+ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

104) wbpO in NC_018828


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1494),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 237/416 (57%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  12   HLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSY  71
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  72   TAERADLAQANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  131
            T++  DL +A+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  191
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  251
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  311
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  371
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  ITPVAKPAAGEYDAVILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPDQADL  427
            +  +        D V++AV+H +++E   + I ++ K   I++D+K ++ +D+ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

105) ZPR_2257 in NC_014041


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1494),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 239/420 (57%), Positives = 331/420 (79%), Gaps = 11/420 (2%)

Query  2    IQKKIAVIGLGYVGLPLARLFATKYTVVGFDINNSRIEELQQGKDKTLEVADHELKAVLK  61
            ++++IAV+GLGYVGLP+A  F+ K  V+GFDIN+SRI EL++  D+T EV+++ LK    
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK----  56

Query  62   KSNSEETGLFCTSNSKDLEQCDFYIITVPTPVDRNNKPDLTPLYKSSETVGKVIKHGDIV  121
                 +T +  TSN+ DL + DF II+VPTP+D++NKPDL PL K+SETVGKVI  + IV
Sbjct  57   -----NTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIV  111

Query  122  VYESTVFPGATEEECVPVLEKFSGLRFNNDFFVGYSPERINPGDKKHTVDKILKVTSGST  181
            VYESTV+PGATEEECVPVLEK+SGL   +DFFVGYSPERINPGDK HT + I KV SG T
Sbjct  112  VYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQT  171

Query  182  KQIAEDINAVYASVITAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNILDIDT  241
             ++ E +  VY+SV+TAG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF+ LDIDT
Sbjct  172  LEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDT  231

Query  242  KAVLQAAGTKWNFIPFTPGLVGGHCIGVDPYYLAQKAQAVGYHPEIILAGRRMNDSMGQY  301
            + VL+A+GTKWNF+ F PGLVGGHCIGVDPYYL++KAQ VG HPE+ILAGRR+ND+M++Y
Sbjct  232  NEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKY  291

Query  302  VAAEVVKLMLHKDLKVKESNILILGFTFKENCPDVRNTRVIDVYRNLKDYGVHVTVYDPL  361
            +A++V+K +L ++L V+ + + +LG+TFKENCPD+RNT+VI++  +LK+YG++VTV D  
Sbjct  292  IASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVE  351

Query  362  ANPEEVLHEYGIKTLNKKPNATFDALILAVAHQEFLE--MDLSELKSKDAVVYDVKGVLG  419
            A+ +E    +G+  ++ K     D +++AV+H++++E   D  +L    ++V+D+KG++ 
Sbjct  352  ADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIIN  411

106) Mmc1_1493 in NC_008576


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1494),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 230/422 (55%), Positives = 326/422 (78%), Gaps = 4/422 (0%)

Query  4    NPKIAIIGLGYVGLPLAVAFGKKYPTVGFDIRSQRITQLQQGQDTTLECSSVELAQASQL  63
            N +IA++GLGYVGLP+AV+FG+K   +GFDI   RI +L++  D T E +   L + +++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNI  60

Query  64   SFTADLQEIAHCNTYIVTVPTPIDNYRRPDLSPLISASETVGKVLKAGDVVIYESTVYPG  123
             +T++ +++   +  I++VPTPID+  +PDL PL+ ASETVGKV+ ++ +V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  ATEEVCVPILAKHSGLVFNETFFAGYSPERINPGDKVHRLETITKVTSGSTAEAAQWVDQ  183
            ATEE CVP+L K SGLV    FF GYSPERINPGDKVH +ETITKV SG T E  + V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  LYQSIIQAGTHLTSCIRVAEAAKVIENTQRDVNIGLINELALLFNRLEIDTLEVLQAAGT  243
            +Y S++ AG H +S I+VAEAAKVIENTQRDVNI+L+NELA++F++L+IDT EVL+A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLPFRPGLVGGHCIGVDPYYLTHKAQEIGYHPDMILAGRRVNDSMGTYVASEVIKLM  303
            KWNFL F+PGLVGGHCIGVDPYYLTHKAQE+G HP++ILAGRR+ND+M+ Y+AS+VIK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  TRKHLCVASSTILILGLTFKENCPDLRNTRVVDIAQELLEYGAEVAIYDPWVDAQEAHHE  363
             ++ L V ++T+ +LGLTFKENCPDLRNT+V++I +EL EYG +V++ D   D +EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YGLNLLTEVPHAHYDAVILAVPHRQFIEAGIEWVQALRKEISVFYDLKSLFAKEQ--SDQ  421
            +GL+L+        D V++AVPH++++E   + ++ L K+ ++ +D+K+++  ++    Q
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSDELNVSQ  419

Query  422  RL  423
            RL
Sbjct  420  RL  421

107) wbpO in NC_018829


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1493),  Expect = 6e-112, Method: Compositional matrix adjust.
 Identities = 235/416 (57%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  12   HLAVVGLGYVGLPLAVEFGKKRPVIGFDINARRVASLKGGHDHTLEVDDHELAQAAQLSY  71
            ++AVVGLGYVGLP+AV FG+K+ VIGFDIN  R+  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  72   TTEREELGKANVFIVTVPTPIDEYKQPDLTPLIKASETIGAVLKRGDIVIYESTVYPGAT  131
            T++ E+L KA+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  132  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  191
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  251
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  311
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  371
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  ITPVAKPAAGAYDAVILAVSHHQFVEMGAEAIRQFGKAEHILYDLKYVLPPEQADL  427
            +  +        D V++AV+H +++E   + I ++ K   I++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

108) wbpO in NC_002927


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1493),  Expect = 7e-112, Method: Compositional matrix adjust.
 Identities = 237/416 (57%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  40   KLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELAQAAQLSY  99
            ++AVVGLGYVGLP+AV FG+K+ VIGFDINE RI  LK   D+T EV ++ L + +++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  100  TAERADLAQANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  159
            T++  DL +A+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  160  EEDCVPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLY  219
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H  +TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  220  NEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  279
            + ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  280  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAK  339
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  340  RRIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHvdvdvydpwvdpAEAEHEYG  399
            + ++V+GA V ++GLTFKENCPDLRNT+V++I+ EL EY ++V V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  400  ITPVAKPAAGAYDAVILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPDQADL  455
            +  +        D V++AV+H +++E   + I ++ K   I++D+K ++ +D+ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

109) REMIM1_CH00772 in NC_021905


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  397 bits (1492),  Expect = 7e-112, Method: Compositional matrix adjust.
 Identities = 231/426 (55%), Positives = 328/426 (77%), Gaps = 6/426 (1%)

Query  9    VAVIGLGYVGLPLAVEFGKKFKTIGFDLSEVKVAAYRQHRDPTGEVSTVDLKAAMRPAGL  68
            +AV+GLGYVGLP+AV FG+K K IGFD++E ++   +++ D T EV+   LK +     +
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT----NI  60

Query  69   EVTTDPSQLVSADFVIVAVPTPVDEAHIPDFSPLIEASTTVGRHMKAGATVIYESTVYPG  128
            E T+++ +L  ADF+I+AVPTP+D  + PD+ PL+ AS TVG+ + +++ V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  129  ATEEVCIPILERESGLQWKRDFNVGYSPERVNPGDQERTITRIVKVVSGDVEDTLQTVGE  188
            ATEE C+P+LE+ SGL   +DF VGYSPER+NPGD+ +T+  I KVVSG+  + L+ V++
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  189  LYESIISAGVYRASSIKVAEAAKVIENTQRDLNIALMNELATIFNRMDIDTLEVLQAAGT  248
            +Y S+++AGV +ASSIKVAEAAKVIENTQRD+NIALMNELA IF+++DIDT EVL+A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  249  KWNFLPFRPGLVGGHCIGVDPYYLTHKAEKLGYHPQVILAGRRINDGMAAYIAQQAVKQL  308
            KWNFL F+PGLVGGHCIGVDPYYLTHKA+ +G HP+VILAGRRIND MA YIA + +K+L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  309  INLGSSIKGAKVIVLGLTFKENCSDLRNSKVADLVAELREYGCEIFVHDPIADSADAVRE  368
            ++ G  ++GA V VLGLTFKENC+DLRN+KV +++ EL+EYG ++ V+D  AD  +A + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  369  YGIELTPWDRLPMAEAIIAAVPHQDFMALPLEDILSMLKPDGVFVDVKSAFDAQSIRARQ  428
            +G++L     L M + ++ AVPH+D+M     D ++++K  G+  D+K+ ++++ +   Q
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ  419

Query  429  IAVWRL  434
              +WRL
Sbjct  420  -RLWRL  424

110) NH44784_029471 in NC_021285


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  396 bits (1488),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 234/413 (57%), Positives = 322/413 (78%), Gaps = 2/413 (0%)

Query  8    KLAVVGLGYVGLPLAVEFGKKRSVIGFDINTRRIEALKAGHDHTLEVSDAELAEAKQLTY  67
            ++AVVGLGYVGLP+AV FG+K+ VIGFDIN  RI  LK   D+T EV++  L ++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  68   TADRAELGQANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  127
            T++  +L +A+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEDCVPVLERVSGLKFNVDFYAGYSPERINPGDKEHRVSTIRKVTSGSTPEVAELVDQLY  187
            EE+CVPVLE+ SGL    DF+ GYSPERINPGDK H   TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  KQIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  247
              ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMTK  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIHVQGARVLVMGLAFKENCPDLRNTRIVDIVKELGDYNVDVDVYDPWVETEEAVHEYG  367
            + ++VQGA V V+GL+FKENCPDLRNT++++I+ EL +Y ++V V D   + +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  ITPVAKLEQGKYDAVILAVAHHQFKDMGAEGIRKLGKPEHILYDLKYVLSPAE  420
            +  +   E    D V++AV+H ++ +   + I +L K   I++D+K ++++ E
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

111) CCC13826_0461 in NC_009802


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1485),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 227/386 (59%), Positives = 317/386 (83%), Gaps = 4/386 (1%)

Query  2    KIAVVGLGYVGLPLAAAFSEKYEVVGFDVNAKRIEELKSGYDRTLELSNEQMKKAIDNGM  61
            +IAVVGLGYVGLP+A +F++K  V+GFD+N  RI ELK+ YDRT E++++++K   +  +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK---NTNI  60

Query  62   KFSLNLDDIRSCNFFIVTVPTPIDKNKRPDLTPVVKATESVAKVLKKGDIVVYESTVYPG  121
             ++ N +D++  +F+I++VPTPIDK+++PDL P++KA+E+V+KV+  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  122  VTEEICVPLLEK-SGLKFNKDFFCGYSPERINPGDKEHTVTKIKKITSGSTPEIADKVDE  180
             TEE CVP+LEK SGL   KDFF GYSPERINPGDK HT   I K+ SG T E+ + V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  181  IYRSIITAGTHKASSIKVAEAAKVIENTQRDINIAFINELAMLFEKLHINTIDVLEAAGT  240
            +Y S++TAG HKASSIKVAEAAKVIENTQRD+NIA++NELA++F+KL+I+T +VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  241  KWNFLNFRPGLVGGHCIGVDPYYLTHKAQEVGYNPEMILAGRRINDDMGRYAADQVIKLM  300
            KWNFLNF+PGLVGGHCIGVDPYYLTHKAQEVG +PE+ILAGRRIND+M++Y A +VIK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  301  IRKGVLINKARVLVLGMTFKENCPDIRNSRVIDVVDELKDFGCKVDVTDPWADSAEVKHE  360
            +++G+ ++ A V VLG+TFKENCPD+RN++VI++++ELK++G +V V D  AD  E K  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  361  YGFDLVKEYNIDDYDCIVIAVAHNEF  386
            +G+DL+   ++   D +++AV+H+++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDY  386

112) vipA in NC_014640


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1486),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 236/413 (58%), Positives = 320/413 (78%), Gaps = 2/413 (0%)

Query  8    KLAVVGLGYVGLPLAVEFGKKRSVIGFDINTRRIDALKAGHDHTLEVSDEELKEATQLSY  67
            ++AVVGLGYVGLP+AV FG+K+ VIGFDIN  RI  LK   D+T EV+++ LK+ T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  68   TADRAVLGQANVYIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  127
            T++   L +A+  I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEDCVPVLERVSGLKFNVDFYAGYSPERINPGDKAHRVSTIKKVTSGSTPEVAELVDQLY  187
            EE+CVPVLE+ SGL    DF+ GYSPERINPGDK H   TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  QQIIVAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  247
              ++ AG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMTK  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIHVQGARVLVMGLAFKENCPDLRNTRIVDIVKELGDYNVAVDVYDPWVDPEEAVHEYG  367
            + ++VQGA V V+GL+FKENCPDLRNT++++I+ EL +Y + V V D   D +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  ITPVANLEEGKYDAVILGVAHHQFTEMGATGIRKLGKPEHILYDLKYVLSPDE  420
            +  +   E    D V+++V+H ++ E    +  +L K   I++D+K ++++DE
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE  414

113) CE0381 in NC_004369


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1487),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 233/413 (57%), Positives = 321/413 (78%), Gaps = 2/413 (0%)

Query  10   KIAVIGLGYVGLPLAVEFGKQFPVIGYDINETRIAELKEGVDKTLESSKEELISATQLQF  69
            +IAV+GLGYVGLP+AV FG++  VIG+DINE+RI ELK+  D+T E + + L   T++++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  70   TANPEDLRAANVYLVTTPTPIDEHKKPDLRIILAATRTIASTMNPGDIVIYESTVYPGVT  129
            T+N+EDL+ A+  +++ PTPID H+KPDL  +L A+ T++  + P+ IV+YESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  130  EEECVPVIEKVSGLKFNESFYAGYSPERINPGDKIHRLPNIVKITSGSTPEVAEFVDELY  189
            EEECVPV+EK SGL     F+ GYSPERINPGDK+H +  I K+ SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  190  RTIITAGTHKASSIKVAEAAKVIENTQRDVNIALINELALLFNKMDIDTQAVLEAAGTKW  249
             +++TAG HKASSIKVAEAAKVIENTQRDVNIAL+NELA++F+K+DIDT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  250  NFLPFRPGLVGGHCIGVDPYYLTHKAQAVGHNPEIILAGRRLNDSMGQYIASQLVKAMLR  309
            NFL F+PGLVGGHCIGVDPYYLTHKAQ VGH+PE+ILAGRR+ND+M++YIAS+++K +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  310  KSTRIENARVLILGLTFKENTPDIRNTRVVDIIAELEDYGISVDAYDPWAAPFEVEHEYG  369
            ++  ++ A V +LGLTFKEN PD+RNT+V++II EL +YG++V   D  A   E    +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  370  ITLKSELEPSTYDSVIVAVAHREFIEMGAQAIRDLGKPESIVYDLKYVLDKAE  422
            + L    E    D V+ AV+H++++E   + I +L K  +IV+D+K +++  E
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

114) wecC in NC_017075


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1487),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 240/425 (57%), Positives = 325/425 (77%), Gaps = 5/425 (1%)

Query  3    TVAVIGLGYVGLPLVVEFGKQMRTIGFDIAQHKVDACLAGTDPSRELPDSEMAAATHAVY  62
             +AV+GLGYVGLP+ V FG++ + IGFDI + ++       D + E+ ++ +   T+  Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  63   TSDPALLAEADVIIVAVPTPVDEAHIPDFKPLIGSSTSVGRHMKKGAIVVYESTVYPGAT  122
            TS++  L  AD II+AVPTP+D  + PD+ PL+ +S +VG+ +  ++IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  123  EEVCIPVLERESGLKWKRDFFVGYSPERINPGDREHTLTKILKIVSGDTPETLEKVAQLY  182
            EE C+PVLE+ SGL   +DFFVGYSPERINPGD+ HT+  I K+VSG+T E LE VA++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  183  ERIIVPGVHRASSIKTAEAAKVIENTQRDLNIALMNELAIIFDKIGLDTSEVLEAAGTKW  242
              ++ +GVH+ASSIK AEAAKVIENTQRD+NIALMNELAIIFDK+++DT+EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  243  NFLKFKPGLVGGHCIGVDPYYLTHKADMLGYHPQVILAGRRINDGMGKFIAEQTIKQMIA  302
            NFL+FKPGLVGGHCIGVDPYYLTHKA+ +G HP+VILAGRRIND M+K+IA + IK+++ 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  303  SGSYVKGARVNVLGLTFKENCGDLRNSKVIDIIHELESYGVDVFVTDAQAEPEEAMHEYG  362
             G  V+GA VNVLGLTFKENC DLRN+KVI+II+EL  YG++V V D +A+ +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  363  VRLVPFEELPRADAIVAAVAHREYAELSTDDLCRKLVKG-GAFIDVKAAFDARALEAAGC  421
            + L+   EL   D ++ AV+H++Y E   D    +LVK+ G  +D+K+ +++  L+ +  
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKD--YINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  422  RVWRL  426
            R+WRL
Sbjct  420  RLWRL  424

115) Sulku_2379 in NC_014762


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1486),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 228/416 (55%), Positives = 332/416 (80%), Gaps = 10/416 (2%)

Query  2    KIAIIGLGYVGLPLAHAFSEKYSVVGFDINQTRIDELKSGYDRTLELNSSQLQEAFERDL  61
            +IA++GLGYVGLP+A +F++K  V+GFDIN++RI ELK+ YDRT E+  ++L+++   ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  62   YLTTSIDDIKDCTIFIITVPTPIDHYKKPNLTPLLKATETVGKLLKRNDIVIYESTVYPG  121
              T++ +D+K   ++II+VPTPID  +KP+L PLLKA+ETVGK++  + IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  122  CTEEDCVPILEKTSGLKFNHDFFCGYSPERINPGDKEHTVTKILKVTSGSTPEIGERINN  181
             TEE+CVP+LEK SGL    DFF GYSPERINPGDK HT   I KV SG T E+ E + +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  182  LYASVITAGTHLAPTIKVAEAAKVIENAQRDVNISFVNELAVMFDKMGIDTQDVLAAAGT  241
            +Y+SV+TAG H A++IKVAEAAKVIEN+QRDVNI+++NELA++FDK++IDT++VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  242  KWNFLKFKPGLVGGHCIGVDPYYLVHKAESIGYFPQVILSGRRINENMGIFVANKVIKLM  301
            KWNFL+FKPGLVGGHCIGVDPYYL HKA+ +G  P+VIL+GRRIN+NM+ ++A++VIK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  302  IKKGLKIEGSKVLVLGITFKENCPDIRNSRVVDVVEELREFGCIVDISDPWANAKEVKEE  361
            +K+GL ++G+ V VLG+TFKENCPD+RN++V++++EEL+E+G  V ++D  A+ +E K  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  362  YNFNLLDHQKLELDAYDAIILAVAHNEYKT-----IPLQNTNQVIFDIKGVLDKAD  412
            + ++L+D + L +   D +++AV+H++Y       I L +   ++FDIKG+++  +
Sbjct  361  FGLDLIDTKELKMV--DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414

116) CPS_3644 in NC_003910


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1485),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 232/412 (57%), Positives = 325/412 (79%), Gaps = 2/412 (0%)

Query  9    KLGIIGLGYVGLPLAVEFGKKYPTLGFDINTKRVGELKQGHDFTLEVSSEELADSEFISY  68
            +++++GLGYVGLP+AV FG+K   +GFDIN  R+ ELK+  D T EV+ + L +++ I Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  69   SADVDDLKNCNIYIVTVPTPIDKHKQPDLTPLVKASAMLAKVINKGDIVIYESTVYPGAT  128
            +++ +DLK+ ++ I++VPTPIDKH++PDL PL+KAS  ++KVI  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  129  EEVCLPEVERHSGLVFNQDFYAGYSPERINPGDKEHRVTNILKVTSGSTPEISDFIDSLY  188
            EE C+P +E+ SGLV  +DF+ GYSPERINPGDK H    I KV SG T E+ +++  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  189  KSIITAGTYQASSIQVAEAAKVIENTQRDLNIALINELAVIFNKLNIDTEEVLKAAGTKW  248
             S++TAG  +ASSI+VAEAAKVIENTQRD+NIAL+NELA+IF+KL+IDT+EVLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  249  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYNPEVILAGRRINDSMGEYVVSQLVKTMLK  308
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G +PEVILAGRRIND+M+ Y+ S+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  309  RKLPVNGANVLVMGLTFKENCPDVRNTKVVDILSELAEFDINVDVYDPWVNPKDAKHEYD  368
            + L V+GA V V+GLTFKENCPD+RNTKV++I+ EL E+++NV V D   + ++AK  ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  369  VDLISAPKHSFYDAVIFAVAHDQFKALSADDIKLLMKKDHVIYDLKYMLDKE  420
            +DLI +      D V+FAV+H ++     D I+ L+K   +++D+K +++ +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSD  413

117) wecC in NC_014323


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1484),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 233/423 (56%), Positives = 326/423 (78%), Gaps = 3/423 (0%)

Query  4    VAVVGLGYVGLPLAVEFGKKRATVGFDLSRSKIENYRRFVDPTGEVSSAELRAASQLTVS  63
            +AVVGLGYVGLP+AV FG+K+  +GFD++ S+I + +   D T EV+   L+  +++  +
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYT  63

Query  64   TDPAILADADYIVVAVPTPVDEAHNPDFGPLAGASQTVGKHMKRGAIVVFESTVYPGATE  123
            +++  L  AD+I++AVPTP+D  ++PD+ PL  AS+TVGK +  ++IVV+ESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  124  EVCVPLLEKYSGLKWRDDFHVGFSPERINPGDKQHTLTNILKIVSGDDADTLERIAQLYE  183
            E CVP+LEKYSGL    DF VG+SPERINPGDK HT+  I K+VSG+  + LE +A++Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  184  SIITAGVHRASSIKVAEAAKVIENTQRDLNIALMNELSIIFDKIGIDTLEVLQAAGTKWN  243
            S++TAGVH+ASSIKVAEAAKVIENTQRD+NIALMNEL+IIFDK++IDT EVL+A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  244  FLPFRPGLVGGHCIGVDPYYLTHKAEMLGYHPQVILAGRRINDGMAKFVAEKTVKSMIAA  303
            FL F+PGLVGGHCIGVDPYYLTHKA+ +G HP+VILAGRRIND MAK++A + +K ++  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  304  GFPIKGSKVNVLGLTFKENCPDLRNSKVVDIVTELQSYGVEVHVHDPVAAGVDAEHEYGI  363
            G+ ++G+ VNVLGLTFKENCPDLRN+KV++I+ EL+ YG++V V+D  A   +A   +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  364  ALENWSDLPRADAVIAAVSHRELLARPLAELQSKLKDGACFIDVKSAFDQPALEQAGYSV  423
             L +  +L   D V+ AV+H++ +     +  + +KD +  +D+K+ ++   L+ +   +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNVSQ-RL  421

Query  424  WRL  426
            WRL
Sbjct  422  WRL  424

118) PT7_2139 in NC_015458


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1484),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 230/413 (56%), Positives = 329/413 (80%), Gaps = 2/413 (0%)

Query  7    KLAVVGLGYVGLPLAVEFGKQRSVLGFDINPRRVAELKSGQDHTlevepaelaeaaqlSF  66
            ++AVVGLGYVGLP+AV FG+++ V+GFDIN  R+ ELK+  D+T EV    L ++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EY  62

Query  67   SNEAEHLAQANVFIVTVPTPIDQYKQPDLTPLVRASETIGKVLKRGDIVIYESTVYPGAT  126
            +++AE+L +A+ +I++VPTPID+ ++PDL PL++ASET+GKV+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEECVPVLERVSGLRFNEDFYAGYSPERINPGDKAHRVSTIKKVTSGSTPEIADLIDELY  186
            EEECVPVLE+ SGL    DF+ GYSPERINPGDK H   TI KV SG T E+ +++ ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  GQIIVAGTHKAPSIRVAEAAKVIENTQRDVNIALINELALIFNKLDIDTQAVLEAAGTKW  246
            + ++ AG HKA+SI+VAEAAKVIENTQRDVNIAL+NELA+IF+KLDIDT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKGMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  RRIQVQGSKVLVMGLAFKENCPDLRNTRIVDIVRELGEYSIDVDVFDPWVGAEEAKHEYD  366
            + ++VQG+ V V+GL+FKENCPDLRNT++++I+ EL EY+++V V D   + +EAK  ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  IDLVSSPEPGAYDAIILAVAHEEFVAMGSQAIHALGKAEHVLYDLKYVLSANE  419
            +DL+ + E    D +++AV+H +++    + I+ L K   +++D+K +++++E
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSDE  414

119) BBta_5622 in NC_009485


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  395 bits (1484),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 231/425 (55%), Positives = 318/425 (75%), Gaps = 5/425 (1%)

Query  4    GRKIAVIGLGYVGLPVAAAFARAGGPVLGFDIDAKRVAELRDGQDRTCEVDAADLRHPGL  63
             R+IAV+GLGYVGLPVA +F+     V+GFDI+  R+ EL++  DRT EV    L++  +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  64   RFTSDPADLGSADFFIVTVPTPIDSARRPDLGAMLAATRSVAAVLKRGDIVVYESTVYPG  123
             +TS++ DL  ADF+I++VPTPID   +PDL ++L A+ +V+ V+  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  AVEEDCVPLLESGSALKAGTDFNVGYSPERINPGDKTHRFETITKVVSAQNPHTLQIVAE  183
            A EE+CVP+LE  S+L  G DF VGYSPERINPGDK H FETITKVVS+Q  + L+IVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYGSVVIAGIHRAPSIKVAEAAKVIENTQRDLNIAFMNELSLIFQALEIDTGDVLAAAGT  243
            VY+SVV AG+H+A+SIKVAEAAKVIENTQRD+NIA+MNEL++IF+ L+IDT +VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLPFSPGLVGGHCIGVDPYYLTYRAEKAGYHPEVILAGRRINDEMGRRIARECIRGL  303
            KWNFL F PGLVGGHCIGVDPYYLT +A+  G HPEVILAGRRIND+M++ IA + I+ L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  LKR--RGRSGVVTILGMTFKENVPDIRNSRVIDIVRELQSFGVEVQVADPLADAAAVHEE  361
            LK+    +++ V +LG+TFKEN PD+RN++VI+I+ EL+ +G++V V D  AD       
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  362  YGIDLTAFAALRPADAVVLAVSHDQFLAGGWSLVQALLREGHGLVLDVKMKLDRASKPGA  421
            +G+DL     L+  D V++AV+H +++      ++ L+++  G+V+D+K  ++      +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDC-GIVFDIKGIINSDELNVS  418

Query  422  IELWR  426
              LWR
Sbjct  419  QRLWR  423

120) wbtE in NC_008601


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  394 bits (1483),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 231/424 (55%), Positives = 330/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQQYKNGFDPTKEVGDEAVRNTTMEFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ KN +D T+EV ++ ++NT +E++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDEARLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYKASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV KASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYHSQVILSGRRINDGMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G H++VIL+GRRIND M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

121) vipA in NC_015723


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  394 bits (1483),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 225/416 (55%), Positives = 320/416 (77%), Gaps = 3/416 (0%)

Query  21   QVAIIGLGYVGLPLAVEFGKQQPVLGFDVNAARIEALRAGHDATLEVSPDELRSAHHLRY  80
            ++A++GLGYVGLP+AV FG+++ V+GFD+N +RI  L+   D T EV+ + L++++ + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  81   SNDPEALRDCQVFIVTVPTPVDRAKRPDLTPLILASETVGRAMAPGAVVIYESTVYPGAT  140
            ++++E L+  + +I++VPTP+D+ ++PDL PL+ ASETVG+ ++P+++V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  141  EEICVPVLERHSGLKFNVDFFCGYSPERINPGDKEHRLPDIRKVTSGSTPEASEAIDKLY  200
            EE CVPVLE+ SGL    DFF GYSPERINPGDK H +  I KV SG T E  E +  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  201  GRIIVAGTHRASSIRVAEAAKVIENTQRDVNIALMNELSLLFHKLGIDTLEVLRAAGTKW  260
            + ++ AG H+ASSI+VAEAAKVIENTQRDVNIALMNEL+++F+KL+IDT EVL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  261  NFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYHPQVILAGRRINDKMAIHVADEVVKLMLR  320
            NFL F+PGLVGGHCIGVDPYYLTHKAQEVG HP+VILAGRRIND+MA  +A +V+K +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  321  RGIPVLDSRVLVLGLTFKENCPDVRNTKAVDIVTTLRSYNAQVDVYDPWINIEDAEHEYG  380
            +G+ V ++ V VLGLTFKENCPD+RNTK ++I+  L+ Y  +V V D   + ++A   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  381  LSCLREAPRNDQYDAIVLAVAHHQFVTMGVRAIKALGKAHAVLFDVKGILPRSEID  436
            L  L ++      D +++AV+H +++    +    L K  +++FD+KGI+   E++
Sbjct  363  LD-LIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

122) Fjoh_0356 in NC_009441


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  394 bits (1483),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 228/418 (55%), Positives = 326/418 (78%), Gaps = 11/418 (2%)

Query  8    KIAVIGLGYVGLPLARLFATKYSVIGFDINETRVKSLSSGFDTTLEVDQETLKAVLVDNS  67
            +IAV+GLGYVGLP+A  F+ K  VIGFDINE+R+K L + +D T EV ++ LK   ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE--  61

Query  68   NSEIGLYCTNVLEDIAACNYFIVTVPTPVDKNNRPDLTPLYKSSESVGKILKKGDVVIYE  127
                  Y +N  ED+   +++I++VPTP+DK+N+PDL PL K+SE+VGK++  + +V+YE
Sbjct  62   ------YTSNA-EDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  128  STVYPGVTEEQCVPVLEKVSGLKFNKDFFAGYSPERINPGDKEHTVEKILKVTSGSTPEV  187
            STVYPG TEE+CVPVLEK SGL   KDFF GYSPERINPGDK HT E I KV SG T EV
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  188  GLKVDALYKSVIIAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNLMNIDTQEV  247
               V  +Y SV+ AG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF+ ++IDT+EV
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  248  LTAAATKWNFLPFKPGLVGGHCIGVDPYYLAQRAQEFGYHPEIILAGRRLNDSMGEYVAS  307
            L A++TKWNFL FKPGLVGGHCIGVDPYYL+++AQE G HPE+ILAGRR+ND+M+ Y+AS
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  308  QIVKLMIKKGISVNGASLLMLGITFKENCPDVRNTKIVDVIKALKEYGIIVTIYDPLANV  367
            +++K ++K+G+ V+GA++ +LG+TFKENCPD+RNTK++++I  LKEYG+ VT+ D  A+ 
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  368  EEVKREYKLETTNSSPIEKFDAIVLGVSHKEFL--KLSFSEFQKENSLLYDVKGVLGT  423
            +E K+ + L+  ++  +   D ++++V+HK+++  K  + ++ K+ ++++D+KG++ +
Sbjct  355  NEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINS  412

123) wbpO in NC_010645


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  393 bits (1477),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 239/413 (58%), Positives = 323/413 (79%), Gaps = 2/413 (0%)

Query  7    KLAVVGLGYVGLPLAVEFGKKRSVIGFDINTRRIDELRAGRDHTLEVDDQELAEAKHLRY  66
            ++AVVGLGYVGLP+AV FG+K+ VIGFDIN  RI EL+   D+T EV ++ L ++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TTDRAELGQANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGAT  126
            T++  +L +A+ +I++VPTPID  ++PDL PL+KASET+G V+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLEKVSGLKFNVDFYAGYSPERINPGDKAHRVSTIKKVTSGSTPEVAELVDQLY  186
            EE+CVPVLEK SGL    DF+ GYSPERINPGDK H   TI KV SG T EV E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  KEIIVAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKW  246
              ++ AG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKCMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ S+++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KRLHVQGAKVLVMGLTFKENCPDLRNTRVVDIIRELGEYNVDVDVYDPWVDAQEAQHEYG  366
            + L+VQGA V V+GLTFKENCPDLRNT+V++II EL EY ++V V D   D +EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPVAEPVEGSYDAVILAVAHHQFVEMGAEAIRKLGKPEHVLYDLKYVLTAQE  419
            +  +        D V++AV+H +++E   + I +L K   +++D+K ++ ++E
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

124) DP0593 in NC_006138


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  393 bits (1477),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 233/421 (56%), Positives = 326/421 (78%), Gaps = 4/421 (0%)

Query  1    MNRKIEIAVIGLGYVGLPLAVEFGKIYPVIGFDHNPVRISELQAGNDITMELTAEELALG  60
            MNR  +IAV+GLGYVGLP+AV FG+   VIGFD N  RI EL+   D T E+T + L   
Sbjct  1    MNR--NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-N  57

Query  61   QQLSFSADAQDLGRCNVYIITVPTPIDKNKKPDLGPLLNASQEVGKVLQEGDVVIYESTV  120
             ++ ++++A+DL + +  II+VPTPIDK++KPDL PLL+AS+ VGKV+  + +V+YESTV
Sbjct  58   TNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTV  117

Query  121  YPGATEEDCVPVLESVSDLTFNRDFFVGYSPERVNPGDKKHRVTTIQKVTSGSTSETADF  180
            YPGATEE+CVPVLE  S+L   +DFFVGYSPER+NPGDK H   TI KV SG T E  ++
Sbjct  118  YPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEI  177

Query  181  VDSLYKKIIIAGTHRASSIKVAEAAKVIENTQRDVNIALVNELALIFNRMEIDTEEVLEA  240
            V  +Y  ++ AG H+ASSIKVAEAAKVIENTQRDVNIAL+NELA+IF++++IDT+EVL A
Sbjct  178  VADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKA  237

Query  241  AGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQELGYHPEIILAGRRINDGVGSYVAAELV  300
            +GTKWNFL F+PGLVGGHCIGVDPYYLTHKAQE+G HPE+ILAGRRIND ++ Y+A++++
Sbjct  238  SGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVI  297

Query  301  KAMLKKKCPMGSARVLIMGLSFKENCPDIRNSKVIDIIKELQSFGIEVDAYDPWVQRSQA  360
            K +LK+   + +A V ++GL+FKENCPD+RN+KVI+II EL+ +G++V   D   ++++A
Sbjct  298  KELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEA  357

Query  361  ERAYGISPIEAPAPKSYDGIVLAVGHRDFAQMGAEAIHALGKTPHVLYDIKCLLPSDQVD  420
             + +G+  I++   K  D +++AV H+D+ +   + I+ L K   +++DIK ++ SD+++
Sbjct  358  KKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSDELN  416

Query  421  L  421
            +
Sbjct  417  V  417

125) PSYCG_03395 in NC_021661


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  393 bits (1480),  Expect = 6e-111, Method: Compositional matrix adjust.
 Identities = 232/415 (56%), Positives = 324/415 (79%), Gaps = 2/415 (0%)

Query  9    IAVIGLGYVGLPLAVEFGKSLPVVGFDINASRIAALCTGTDHTLEVSNEELAQASHLSYS  68
            IAV+GLGYVGLP+AV FG+   V+GFDIN SRI  L    D+T EV+++ L + +++ Y+
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEYT  63

Query  69   CDIKALKDCNFFIVTVPTPIDKYKQPDLTPLIKASEAIGSLLKKDDIVVYESTVYPGATE  128
             +   LK  +F+I++VPTPIDK ++PDL PL+KASE++G ++  D IVVYESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  129  EVCIPVLEKVSGLAFNKDFYAGYSPERINPGDKEHRVTNILKVTAGSTPEVADFVDDVYN  188
            E C+PVLEK SGL   KDF+ GYSPERINPGDK H    I KV +G T EV ++V DVY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  189  LIITAGTHKAASIKVAEAAKVIENTQRDVNIALINELAVIFNKMGIDTQAVLEAAGTKWN  248
             ++TAG HKA+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT+ VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  249  FLPFRPGLVGGHCIGVDPYYLTHKAQAIGYNPEIILAGRRLNDSMGEYVVTQLVKTMIKK  308
            FL F+PGLVGGHCIGVDPYYLTHKAQ +G +PE+ILAGRR+ND+M+ Y+ ++++K ++K+
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  309  RIQVEGAKVLILGLSFKENCPDVRNTKVIDIVHELEEYNIEVDVYDPWVDKAEAEREYNV  368
             ++V+GA V +LGL+FKENCPD+RNTKVI+I++EL EY ++V V D   DK EA + + +
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  369  TPISKPAINNYDGIILAVAHNEFVELGVDQIRAFGKNEHVLYDLKYVFTKEDTDI  423
              I    ++  D +++AV+H++++E   D I  + K+  +++D+K ++  ++ ++
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

126) Asuc_0111 in NC_009655


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  393 bits (1479),  Expect = 7e-111, Method: Compositional matrix adjust.
 Identities = 231/404 (58%), Positives = 318/404 (79%), Gaps = 3/404 (0%)

Query  19   PLAVEFGKQRETIGFDISPNRVKELAEGKDRTLEVSSEALKSATHLSYTSDLERLKRCNF  78
            P+AV FG+++  IGFDI+ +R+KEL +  DRT EV+ + LK+ T++ YTS+ E LK+ +F
Sbjct  16   PVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYTSNAEDLKKADF  74

Query  79   FIVTVPTPIDDVNRPDLTPLQKASESIGKVLKKGDIVVYESTVYPGATEEVCVPILERVS  138
            +I++VPTPID  N+PDL PL KASE++GKV+  + IVVYESTVYPGATEE CVP+LE+ S
Sbjct  75   IIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYS  134

Query  139  GLKFNQDFFAGYSPERINPGDKVNTLTKIKKITSGSTPEVADIVDQMYGSIITAGTHKAA  198
            GL   +DFF GYSPERINPGDKV+T+  I K+ SG T EV +IV ++Y+S++TAG HKA+
Sbjct  135  GLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKAS  194

Query  199  SIKVAEAAKVIENTQRDLNIALVNELSIIFERVGIDTVDVLEAAGSKWNFLPFRPGLVGG  258
            SIKVAEAAKVIENTQRD+NIAL+NEL+IIF++++IDT +VL A+G+KWNFL F+PGLVGG
Sbjct  195  SIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGG  254

Query  259  HCIGVDPYYLTHKAEEVGYNPQVILAGRRINDNMAHYVAQTTVKLMLNHNIDVAKAKVGI  318
            HCIGVDPYYLTHKA+EVG +P+VILAGRRINDNMA Y+A   +K +L++ ++V  A V +
Sbjct  255  HCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNV  314

Query  319  LGVTFKENCPDIRNSKVVDVIHELRNWGADVVVADPWADPAEVKHEYGLDLSVIDENHPV  378
            LG+TFKENCPD+RN+KV+++I+EL++ G +V V D  AD  E K  +GLDL    E   V
Sbjct  315  LGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMV  374

Query  379  DALIVAVGHKEFRELNPEILRTYMNSSNPVLVDVKSLFDRDALS  422
            D ++ AV HK++ E + + +    + +  ++ D+K++++ D L+
Sbjct  375  DVVLFAVPHKDYMENKKDYINLVKDCG--IVFDIKGIINSDELN  416

127) TK90_2543 in NC_013889


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  393 bits (1479),  Expect = 8e-111, Method: Compositional matrix adjust.
 Identities = 222/414 (54%), Positives = 312/414 (76%), Gaps = 3/414 (0%)

Query  11   RLGVIGLGYVGLPLAVEFGRVWPTLGFDIQPGRIQDLKNGIDRTREVEPEDLAAATHLDY  70
             ++V+GLGYVGLP+AV FG     +GFDI+ +RI++LKN  DRT EV  + L   T+++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  71   TTELEALRPCNVFVVTVPTPIDAHRRPDLRPLLGATHTVGQVLKRGDVVIYESTVYPGAT  130
            T++ E L+  + ++++VPTPID H +PDL PLL A++TVG+V+  + +V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  131  EEDCVPILERESGLIHNEDFFTGYSPERINPGDKAHRVTSIKKVTSGSLPEVADFVDALY  190
            EE+CVP+LE+ SGL+   DFF GYSPERINPGDK H   +I KV SG   EV ++V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  191  ARVITAGTHKAESIRVAEAAKVIENTQRDVNIALINELALLFERLGLDTEAVLQAAGTKW  250
            + V+TAG HKA SI+VAEAAKVIENTQRDVNIAL+NELA++F++L++DT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  251  NFLPFRPGLVGGHCIGVDPYYLTHKAQAVGHHPEMILAGRRVNDAMGAHIADATIRALVR  310
            NFL F+PGLVGGHCIGVDPYYLTHKAQ VGHHPE+ILAGRR+ND M+  IA   I+ L++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  311  KGINPVGTRILLMGLTFKENCPDLRNTRVMDIYHTLRGYNTEVVVFDPWVDPEEAEHEYG  370
            +G++  G+ + ++GLTFKENCPDLRNT+V++I + L+ Y  +V V D   D +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  371  ITPITSAPEADSFDAIIVAVPHQAFLDMGVEAIRALAHPQAVLFDVKSVFPREA  424
            +  +  + E    D ++ AVPH+ +++   + I  L    +++FD+K+++  + 
Sbjct  363  LD-LIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

128) P700755_003407 in NC_018721


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1476),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 230/422 (55%), Positives = 334/422 (80%), Gaps = 10/422 (2%)

Query  4    PKIAIIGLGYVGLPLAVAFAKKYPVVGFDINQSRVDELNSGTDHTLEVSDKDLKEALTNN  63
             +IA++GLGYVGLP+AV+F++K  V+GFDIN+SR+ EL++  D+T EV+++ LK++    
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT----  58

Query  64   DSPVMKLSTESNDMKEATIFIVTVPTPTDKNRQPVLTPLIKASETIGGILKDGDIVIYES  123
                +  +++++D+K A ++I++VPTP DK+ +P L PL+KASET+G ++  + IV+YES
Sbjct  59   ---NIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYES  115

Query  124  TVYPGVTEEVCVPVLEQFSGKTFNKDFFAGYSPERINPGDKEHTITTILKVTSGSTPEIA  183
            TVYPG TEE CVPVLE++SG    KDFF GYSPERINPGDK HT+ TI KV SG T E+ 
Sbjct  116  TVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVL  175

Query  184  KRVDDLYASIITAGTHLATSIKVAEAAKVIENSQRDINIAFVNELSKIFRLLDIDTNDVL  243
              V D+Y+S++TAG H A+SIKVAEAAKVIEN+QRD+NIA++NEL+ IF  LDIDTN+VL
Sbjct  176  EIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVL  235

Query  244  EAAATKWNFIKFSPGLVGGHCIGVDPYYLAQKALEVGYNPEIILSGRRINDGMGKYVASE  303
             A++TKWNF++F PGLVGGHCIGVDPYYL++KA EVG +PE+IL+GRRIND M+KY+AS+
Sbjct  236  KASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASN  295

Query  304  VIKLMLNKETKIKNGKALVLGVTFKENCPDTRNTKAIDVIEELKKYNMDVDVCDPWADKQ  363
            VIK +L++   ++ +   VLG+TFKENCPD RNTK I++IEELK Y ++V V D  ADK+
Sbjct  296  VIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKN  355

Query  364  EVKTLFDIDLLRCEDLKLTYDTIILAVSHNEFLNL--DFEALKNENAVIFDVKSFLPTDK  421
            E K +F++DL+   +LK+  D +++AV+H+++++   D+  L ++ +++FD+K+++ +D 
Sbjct  356  EAKKFFGLDLIDTKELKMV-DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414

Query  422  ID  423
            ++
Sbjct  415  LN  416

129) wbtE in NC_008245


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1476),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 228/424 (54%), Positives = 330/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYHSQVILSGRRINDSMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G H++VIL+GRRIND+M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

130) NE061598_08155 in NC_017453


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1476),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 228/424 (54%), Positives = 330/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYHSQVILSGRRINDSMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G H++VIL+GRRIND+M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

131) wbtE in NC_006570


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1476),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 228/424 (54%), Positives = 330/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYHSQVILSGRRINDSMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G H++VIL+GRRIND+M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

132) wbtE in NC_016937


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1476),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 228/424 (54%), Positives = 330/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYHSQVILSGRRINDSMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G H++VIL+GRRIND+M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

133) wbtE in NC_016933


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1476),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 228/424 (54%), Positives = 330/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYHSQVILSGRRINDSMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G H++VIL+GRRIND+M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

134) CCV52592_1221 in NC_009715


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1474),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 239/414 (58%), Positives = 329/414 (80%), Gaps = 11/414 (2%)

Query  2    KIAVVGLGYVGLPLAAAFSEKYEVVGFDVNRARIEELKNAHDRTLELSHEQMQKAIANGM  61
            +IAVVGLGYVGLP+A +F++K  V+GFD+N +RI ELKN  DRT E+++++++++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  62   KFSLNLDDIKDCNFFIVTVPTPIDKNKRPDLTPVIKATQSVAKVLKKGDIVVYESTVYPG  121
             ++ N +D+K  +F+I++VPTPIDK+++PDL P++KA+++V+KV+  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  122  VTEEICVPLLEE-SGLKFNEDFFCGYSPERINPGDKEHTVTKIKKITSGSTPAVADKVDE  180
             TEE CVP+LE  SGL    DFF GYSPERINPGDK HT   I K+ SG T  V + V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  181  IYASIITAGTHKAPSIKVAEAAKVIENTQRDINIAFINELAMIFERLGIDTNAVLEAAGT  240
            +Y+S++TAG HKA+SIKVAEAAKVIENTQRD+NIA++NELA+IF++L+IDTN VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  241  KWNFLNFRPGLVGGHCIGVDPYYLTHKAQEVGYHPEIILAGRRINDNMGKYAADQVIKLM  300
            KWNFLNF+PGLVGGHCIGVDPYYLTHKAQEVG HPE+ILAGRRINDNM+KY A +VIK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  301  IKRGVLINKARVLVLGLTFKENCPDIRNSRVIDVIDELKDFGCKVDVYDPWVDEAEVVRE  360
            +K+G+ ++ A V VLGLTFKENCPD+RN++VI++I+ELK++G +V V D   D  E  + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  361  YGITPLKSYELKDYDCVVIAVAHDEFKN-----INL-DGC-LVYDIKNVYKKAD  407
            +G+  + + ELK  D V++AV+H ++ +     INL  +C +V+DIK + +  +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414

135) NIS_0283 in NC_009662


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1473),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 233/420 (56%), Positives = 331/420 (79%), Gaps = 7/420 (1%)

Query  2    TLSIIGLGYVGLPLAVEFGKKYETIGFDINANRIEELKKGIDRTLEVNEKELKEAKNLSF  61
             ++++GLGYVGLP+AV FG+K   IGFDIN +RI ELK+  DRT EV E+ LK++ N+ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  62   TTSIEDIKKANIYIVTVPTPIDTHKNPDLTPLVMASRTVGRVLKKGDIVIYESTVFPGCT  121
            T++ ED+KKA++ I++VPTPID H++PDL PL+ AS TVG+V+  + IV+YESTV+PG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  122  EEVCVPELERESGLTFNKDFFCGYSPERINPGDKEHRLPNIKKVTSGSTPEIAQKVDALY  181
            EE CVP LE+ SGL   KDFF GYSPERINPGDK H +  I KV SG T E+ + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  182  KSIITAGTHLAPSIKVAEAAKVIENAQRDINIGFVNELALIFDKLNIDTLDVLEAAGTKW  241
             S++TAG H A+SIKVAEAAKVIEN+QRD+NI+++NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  242  NFLPFRPGLVGGHCIGVDPYYLAYKAKEVGYHPQIILAGRRTNDEMGVFVANKVVKLLIH  301
            NFL F+PGLVGGHCIGVDPYYL+ KA+EVG HP++ILAGRR ND+M+ ++A++V+K L+ 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  302  KGHKVKGSKALVLGITFKENCPDIRNSRVIDVINELQDFGIHVDVYDPWADKEEVEHEYG  361
            +G  V+G+   VLG+TFKENCPD+RN++VI++I+EL+++G++V V D  ADK+E    +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  362  IELLEKSPEFNDYDAIILAVAHNQFKQL--DFSKRPESC-VVYDIKGVLPKE--VVDKRL  416
            ++L++ + E++  D +++AV+H+++ +   D+ +    C +V+DIKG++  +   V +RL
Sbjct  363  LDLID-TKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

136) wbtE in NC_010677


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1474),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 228/424 (54%), Positives = 329/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYHSQVILSGRRINDGMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G H++VIL+GRRIND M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPIADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

137) wbtE in NC_009257


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  392 bits (1475),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 228/424 (54%), Positives = 329/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYHSQVILSGRRINDGMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G H++VIL+GRRIND M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

138) DGI_1401 in NC_022444


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  391 bits (1472),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 231/382 (61%), Positives = 305/382 (80%), Gaps = 0/382 (0%)

Query  22   VAVVGLGYVGLPLAVALARQFRVIGFDINATRVQELRQGHDRTGEVEDACLQAVSIDYSH  81
            +AVVGLGYVGLP+AV+++ + +VIGFDIN +R++EL++  DRT EV +  L+  +I+Y+ 
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTS  64

Query  82   NPEDLAAAGVIIVAVPTPIDDHRSPDLRPVRGASITVGRHMRKGAVICYESTVYPGLTEE  141
            N+EDL  A+ II+AVPTPID H  PDL P+  AS TVG+ +  ++++ YESTVYPG TEE
Sbjct  65   NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEE  124

Query  142  VCVPLLEEHSGLTCGADFWVGYSPERINPGDKVHTLETIVKVVAGQDDATADLLCQLYGA  201
             CVP+LE  SGL CG DF VGYSPERINPGDKVHT+ETI KVV+GQ     +++ ++Y++
Sbjct  125  ECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSS  184

Query  202  VITAGVHRASSIKVAEAAKVIENTQRDLNIALMNELSILFDRMGIDTLEVLQAAATKWNF  261
            V+TAGVH+ASSIKVAEAAKVIENTQRD+NIALMNEL+I+FD+++IDT EVL+A++TKWNF
Sbjct  185  VVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNF  244

Query  262  IRFTPGLVGGHCIGVDPYYLTFKAESLGFHPQVILAGRRINDFMGKYVAETCIKKLFQGG  321
            + F PGLVGGHCIGVDPYYLT KA+ +G HP+VILAGRRIND M+KY+A   IK L++ G
Sbjct  245  LNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQG  304

Query  322  GRTQGARVGVLGFTFKENVPDLRNTRVIDVVRELEEYAVTVLVHDPVCDAEEAHEEYGLT  381
               QGA V VLG+TFKEN PDLRNT+VI+++ EL EY++ V V+D   D +EA   +GL 
Sbjct  305  LEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLD  364

Query  382  LCGLEDFQDLDAVIVAVPHQVF  403
            L +  +++ +D V+ AVPH+ +
Sbjct  365  LIDTKELKMVDVVLFAVPHKDY  386

139) BRADO5154 in NC_009445


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  391 bits (1472),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 230/425 (55%), Positives = 315/425 (75%), Gaps = 5/425 (1%)

Query  14   GRKIAVIGLGYVGLPVAAAFARAGCPVIGFDIDAARVAELRDGRDRTCEVEAADLKRPGL  73
             R+IAV+GLGYVGLPVA +F+     VIGFDI+ +R+ EL++  DRT EV    LK   +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  74   RFTSDPADMAAADFFIVTVPTPIDSARRPDLSAMRSATRTVRAVLKRGDIVVYESTVYPG  133
             +TS++ D+  ADF+I++VPTPID   +PDL ++  A+ TV  V+  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  134  AVEEDCVPLLESGSELKAGLDFNVGYSPERINPGDKTHRFETITKVVSAQNPQTLQIVAE  193
            A EE+CVP+LE  S L  G DF VGYSPERINPGDK H FETITKVVS+Q  + L+IVA+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  194  VYGSVVKAGIHRAPSIRVAEAAKVIENTQRDLNIAFMNELSLIFQALEIDTGDVLAAAAT  253
            VY+SVV AG+H+A+SI+VAEAAKVIENTQRD+NIA+MNEL++IF+ L+IDT +VL A++T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  254  KWNFLPFTPGLVGGHCIGVDPYYLTYRAEKAGYHPEVILAGRRINDEMGRRIARECIRGL  313
            KWNFL F PGLVGGHCIGVDPYYLT +A+  G HPEVILAGRRIND+M++ IA + I+ L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  314  LKR--KGRSGVVTILGMTFKENVPDIRNSRVIDIISELQSFGIDVQVADPLADAAAVHEE  371
            LK+    +++ V +LG+TFKEN PD+RN++VI+II EL+ +G++V V D  AD       
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  372  YGIALTAAEALRPADAVVLAVSHDQFLAGGWPLVQGLLREGSGLVLDVKMKLDRASKPGA  431
            +G+ L  +  L+  D V++AV+H +++      ++ L+++  G+V+D+K  ++      +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKD-CGIVFDIKGIINSDELNVS  418

Query  432  IELWR  436
              LWR
Sbjct  419  QRLWR  423

140) bpr_I2538 in NC_014387


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  391 bits (1472),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 226/418 (55%), Positives = 328/418 (79%), Gaps = 5/418 (1%)

Query  21   YVGMPIAVAYAKKIKVVGYDFNAAKVELYKKGIDPTREVGNDAIKETTVEFTADPEKLRE  80
            YVG+P+AV++++K KV+G+D+N +++   K+  D T EV ++ +K+T +E+T+++E L+ 
Sbjct  12   YVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKK  71

Query  81   CKFHVVAVPTPVNDDHTPDLSPVEGASHTLGKYLTKGSIVVYESTVYPGVTEDVCVPILE  140
              F ++AVPTP++ ++ PDL P+  AS+T+GK +T ++IVVYESTVYPG TE+ CVP+LE
Sbjct  72   ADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLE  131

Query  141  QESGLKCGVDFKVGYSPERINPGDKVHRLDTITKIVSGMDEETLEEVANVYSLVALAGVY  200
            + SGL CG DF VGYSPERINPGDKVH ++TITK+VSG   E LE VA+VYS V  AGV 
Sbjct  132  KYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVH  191

Query  201  KAQSIKVAEAAKVIENSQRDINIAFMNELSMIFNKMGIDTKSVLEAAGTKWNFLNFRPGL  260
            KA SIKVAEAAKVIEN+QRD+NIA+MNEL++IF+K++IDT+ VL A+GTKWNFLNF+PGL
Sbjct  192  KASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGL  251

Query  261  VGGHCIGVDPYYLTYKAEELGYHSQIILSGRRINDDMGKYIAESAVKRLIANDIPVKNAK  320
            VGGHCIGVDPYYLT KA+E+G H+++IL+GRRIND+M+KYIA + +K L+ +++ V+ A 
Sbjct  252  VGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGAT  311

Query  321  VAILGFTFKENCPDTRNTKIIDIYNELGEYGITPIVVDPQADADEAKRLYGIEFNNLSDV  380
            V +LG+TFKENCPD RNTK+I+I +EL EYG+   V D +AD +EAK+++G+++ +  ++
Sbjct  312  VNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKEL  371

Query  381  KDMDLVIMAVAHEEFKAYKPADIAGFFNASHKTKVFMDLKGIFNLEDYKAPEFDYWRL  438
            K +D+V+ AV+H ++   K     +++N      +  D+KGI+N ++ + ++   WRL
Sbjct  372  KMVDVVLFAVPHKDYMENKK----DYINLVKDCGIVFDIKGIINSDELNVSQ-RLWRL  424

141) Aave_0949 in NC_008752


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  391 bits (1470),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 223/390 (58%), Positives = 305/390 (79%), Gaps = 1/390 (0%)

Query  6    NATIAVIGLGYVGLPLAVEFGKQRPVLGFDINAERIAELQSGKDGTLEVTSEDLRAATHL  65
            N  IAV+GLGYVGLP+AV FG+++ V+GFDIN  RI EL++  D T EVT + L+  T++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNI  60

Query  66   RYSADPEDLKDCGIFIVTVPTPVDTANRPDMTPLVKASETVGRAMPQGAVVIYESTVYPG  125
             Y++++EDLK  +++I++VPTP+D  N+PD+ PL+KASETVG+ +  +++V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  126  ATEEVCVPVLERCSGKTFNTGFFCGYSPERINPGDKVNTLTKIRKITSGSTPEVADAVDA  185
            ATEE CVPVLE+ SG     +FF GYSPERINPGDKV+T+  I K+ SG T EV + V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  186  LYAEIITAGTHKASSLKVAEAAKVIENTQRDLNIALVNELSVIFERLGIDTLDVLEAAGS  245
            +Y+ ++TAG HKASS+KVAEAAKVIENTQRD+NIAL+NEL++IF++L+IDT +VL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  246  KWNFLPFRPGLVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIRLM  305
            KWNFL F+PGLVGGHCIGVDPYYLTHKA+EVG HP+VILAGRRINDNMA+Y+A N I+ +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  306  LRNGMDVPRCRIGVLGITFKENCPDIRNSKVVDMVREFESWGANVVVCDPWANAQDVQHE  365
            L++G++V    + VLG+TFKENCPD+RN+KV++++ E+   G NV V D  A+ ++ +  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  366  YGISLGSVSAQEPVDALVVAVGHHQFREAS  395
            +G+ L        VD ++ AV H ++ E  
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENK  390

142) TK90_1550 in NC_013889


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  391 bits (1470),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 222/416 (54%), Positives = 313/416 (76%), Gaps = 2/416 (0%)

Query  7    KIAVIGLGYVGLPLAVAFGAKRPVVGFDVNAARVAALRAGHDDTLEVPDGELTAAEHLRV  66
            +IAV+GLGYVGLP+AV+FG K+ V+GFD+N +R+  L+   D T EV +  L  + ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TDDAAALAECNVFIVTVPTPIDSHRRPDLGPLLAASETVGRALSPGGVVVYESTVYPGAT  126
            T +A  L   + +I++VPTPID H +PDL PLL ASETVG+ ++P+ +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCIPVVERVSGLTYNRDFFAGYSPERVNPGDREHRVTTIQKVTSGSTPEVAEFVDALY  186
            EE+C+PV+E+ SGL   +DFF GYSPER+NPGD+ H   TI KV SG T EV E+V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  REVITAGTYRASSIRVAEAAKVIENTQRDVNIALINELAILFNRLGIDTQEVLEAAGSKW  246
              V+TAG  +ASSI+VAEAAKVIENTQRDVNIAL+NELAI+F++L+IDT+EVL A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQQIGHHPEIILAGRRLNDGMGAYVVGELVKAMMR  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ++GHHPE+ILAGRR+ND M+ Y+ ++++K +++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KGTRVQGGRVLVMGLTFKENTPDLRNSRAVDVVRELESYGLAVDAFDPWVNPAEAEHELD  366
            +G  VQG+ V V+GLTFKEN PDLRN++ ++++ EL  YGL V   D   +  EA   ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  IVPIAEPEGGAYDAIVVAVAHREFRELGAQGIRAFGRDPHVLYDLKYLLPKGEADI  422
            +  I   E    D ++ AV+H+++ E   ++   + +D  +++D+K ++  +E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

143) DSC_06815 in NC_016147


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  391 bits (1470),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 220/417 (53%), Positives = 315/417 (76%), Gaps = 2/417 (0%)

Query  7    SPRIAIIGLGYVGLPLAVAFGRQYETVGFDISAARVRALQARQDHTLEISPEQWKAAGRL  66
            +  IA++GLGYVGLP+AV+FG +   +GFDI+ +R++ L+   D+T E++ ++ K +  +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-I  60

Query  67   TCTDDAAHLAGCEVFIVAVPTPVDDYKRPDLGALEAASRTVGRAIGPGGLAIFESTVYPG  126
              T +A +L   + +I+AVPTP+D  ++PDL +L  AS TVG+ I P+ + ++ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  127  ATEEICVPIIQAESGLVFNRDFHAGYSPERINPGDREHRLETIVKVTSGSTPEAAARVDA  186
            ATEE CVP+++  SGLV  +DF  GYSPERINPGD+ H +ETI KV SG T E    V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  187  LYRSIVQAGTHRAPSIRVAEAAKVIENTQRDVNIALVNELALLFHRLGIDTGEVLEAAGT  246
            +Y S+V AG H+A+SI+VAEAAKVIENTQRDVNIAL+NELA++F++L+IDT EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  247  KWNFLRFKPGLVGGHCIGVDPYYLTHKAQHVGHHPEVILAGRRINDGMGAHVAQRTIKLM  306
            KWNFL FKPGLVGGHCIGVDPYYLTHKAQ+VGHHPEVILAGRRIND M+  +A   IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  307  ARRGQPISGARALVLGLAFKQDCPDLRNTRVIDIVQELQQYNVSVDVHDPWVDADQARHE  366
             ++G  + GA   VLGL+FK++CPDLRNT+VI+I++EL++Y ++V V+D   D ++A+  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  367  YGLDLVQTPAPGHYDAVILAVAHRQFIALGGAGVRAFAKPCGTLFDVQRVLSREDVD  423
            +GLDL++T      D V++AV+H++++     +   + K CG +FD++ +++ ++++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

144) UWK_01813 in NC_020304


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  390 bits (1465),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 232/415 (56%), Positives = 331/415 (80%), Gaps = 2/415 (0%)

Query  7    KIAVIGLGYVGLPLAVELGKNYPTLGFDIKEARVQELLEGRDSTREVTPEDLANNPQLQF  66
            +IAV+GLGYVGLP+AV +G++   +GFDI+E+R++EL +  D T EVT + L +N ++++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  67   SSQEEDLKAYNFYIIAVPTPIDRHKQPNLRPLQGASSLVGRFLSEGDIVVYESTVYPGAT  126
            +S+ EDLK  +F IIAVPTPID+H++P+L PL  AS  VG+ ++ + IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEICVPILEQESNLTFNKNFSVGYSPERINPGDKLHCLTTITKVTAGSNPEAAEIIDTLY  186
            EE CVP+LE+ S L   K+F VGYSPERINPGDK+H + TITKV +G   E  EI+  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  ASIVKAGTYKASSIKVAEAAKVIENTQRDVNIALVNELSLIFHRMGIDTNEVLDAAATKW  246
            +S+V AG  KASSIKVAEAAKVIENTQRDVNIAL+NEL++IF++++IDTNEVL A++TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQETGYNPEMILAGRRINDNMGAYVVSRVVKLMLQ  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQE G +PE+ILAGRRINDNM+ Y+ S V+K +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KKVHVKDSKILILGLTFKENCPDIRNTKVVDVINEFTSYGVSLDVYDPWVDKDEARQEYN  366
            + ++V+++ + +LGLTFKENCPD+RNTKV+++I+E+  YG+++ V D   DK+EA++ + 
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  INLIDSPTVAHYDAIVLCVAHGEFKLKGIEWIKSLGKEESIIYDVKNILPSNAVD  421
            ++LID+  +   D +++ V+H ++  +  + I +L K+ +I++D+K I+ S+ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

145) Clo1100_2991 in NC_016791


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  390 bits (1468),  Expect = 5e-110, Method: Compositional matrix adjust.
 Identities = 222/427 (52%), Positives = 330/427 (78%), Gaps = 6/427 (1%)

Query  13   KIAVIGLGYVGLPLAIAFSKRASVIGYDISNEKIELYNKGIDPTKEVGDYAIKNSTVEFT  72
            +IAV+GLGYVGLP+A++F+++  VIG+DI++ +I   ++  D T+EV +  +KN+ +E+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDETRLKEAGFFIISVPTPVKSDHTPNLNPVELASCIVGRNLAKGSIVVYESTVYPGVTE  132
            S+   LK A+F+II+VPTP+  ++ P+L P+  AS  VG+ ++ ++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EICIPILEKESGMKCGEDFKVGYSPERINPGDKQHRLENIIKVVSGIDADALDTIAKVYA  192
            E C+P+LEK SG+ CG DF VGYSPERINPGDK H +E I KVVSG   + L+ +A VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  MVIKAGVYPADSIKVAEAAKVIENSQRDINIAFMNEIAMVFNKMNINTKSVLEAAGTKWN  252
             V+ AGV  A SIKVAEAAKVIEN+QRD+NIA+MNE+A++F+K++I+T+ VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLKFSPGLVGGHCIGVDPYYFTYKAEQLGYHSQIILSGRRINDVMGKYIVENLIKNMITA  312
            FL+F PGLVGGHCIGVDPYY+T KA+++G H+++IL+GRRIND M+KYI  N+IK+++  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DLSVKNSKIAILGFTFKENCPDTRNTRVIDIVESLGEYGIVPVISDPEADALEAKQEYGV  372
            +L V+ + + +LG+TFKENCPD RNT+VI+I+E L EYG+   ++D EAD  EAK+ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  DLTPIDDIRGMDAVVLAVSHNSFLKLSKADFDKMFKTDTKESKVIIDVKGALNKDEFVNP  432
            DL    +++ +D V++AV+H+ ++  +K D+ ++     K+  +++D+KG +N DE+  +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINL----VKDCGIVFDIKGIINSDELNVS  418

Query  433  EYIYWSL  439
            + + W L
Sbjct  419  QRL-WRL  424

146) Intca_2644 in NC_014830


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  390 bits (1467),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 217/385 (57%), Positives = 311/385 (81%), Gaps = 1/385 (0%)

Query  24   LAVLGLGYVGLPLAVEFGKQFDVLGYDIDSRRVKELQDGHDHTLEVDDSDLAGASRLRFS  83
            +AV+GLGYVGLP+AV FG++  V+G+DI+  R+KEL++  D+T EV ++ L  ++ + ++
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEYT  63

Query  84   DDEGDLAWANVYIVTTPTPIDAHKQPDLSPVLSATEAIARALRPGDVVIYESTVYPGATE  143
             +  DL  A+  I++ PTPID H++PDL P+L A+E++++ + P+ +V+YESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  144  EQCVPVLEAVSGLVFNQDFSVGYSPERINPGDREHRLPSIVKVTSGSTPEAADFVDDLYR  203
            E+CVPVLE  SGLV  +DF VGYSPERINPGD+ H + +I KV SG T E  ++V D+Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  204  SIITAGTHRAPSIRVAEAAKVIENTQRDVNIALINELAVLFNRLGIDTEDVLLAAGSKWN  263
            S++TAG H+A+SI+VAEAAKVIENTQRDVNIAL+NELA++F++L+IDT++VL A+G+KWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  264  FLGFRPGLVGGHCIGVDPYYLTHKAQSVGYHPEVILAGRRLNDSMGSYVASQLVKRMTKE  323
            FL F+PGLVGGHCIGVDPYYLTHKAQ VG HPEVILAGRR+ND+M+ Y+AS+++K + K+
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  324  EIQVHGARVLVLGLTFKENTPDLRNSRVVDILAELADYDITVDVCDPWADPEEARREYGV  383
             ++V+GA V VLGLTFKEN PDLRN++V++I+ EL +Y++ V V D  AD +EA++ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  384  DLVASPARGAYDGIIIAVAHHQFVD  408
            DL+ +      D +++AV+H ++++
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME  388

147) Thivi_2178 in NC_018012


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  390 bits (1467),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 234/428 (55%), Positives = 324/428 (76%), Gaps = 4/428 (0%)

Query  1    MKPIVAVVGLGYVGLPLAVEFGKQYETIGYDLSEAKIAQYRNHCDPTGEVSTEDLKAATR  60
            M+  +AVVGLGYVGLP+AV FG++   IG+D++E++I + +N+ D T EV+ + LK  T 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TN  59

Query  61   LSVSTDPSTLGKADFIVVAVPTPVDDTHIPDFSPLVGSSTTVGQHMKRGATVVYESTVYP  120
            +  ++++  L KADFI++AVPTP+D  + PD+ PL+ +S TVG+ +  ++ VVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GATEEVCVPLLEEHSGLKWKTDFHVGYSPERVNPGDKERTITRIVKVVAGDDEPTADAVA  180
            GATEE CVP+LE  SGL    DF VGYSPER+NPGDK +T+  I KVV+G+     + VA
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  ALYASVITAGVHRASSIKVAEAAKVIENTQRDLNIALMNELALIFGRLGIDTLEVLQAAG  240
             +Y+SV+TAGVH+ASSIKVAEAAKVIENTQRD+NIALMNELA+IF++L+IDT EVL+A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFRPGLVGGHCIGVDPYYLTHKAVALGYHPEVILAGRRINDGMAAYVAQQTVKA  300
            TKWNFL F+PGLVGGHCIGVDPYYLTHKA  +G HPEVILAGRRIND MA Y+A + +K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  LINNGDTIKGDKVIVLGLTFKENCPDLRNSKVADLVRELQSFGCEVAVHDPIAESSEAEH  360
            L+++G  ++G  V VLGLTFKENCPDLRN+KV +++ EL+ +G +V+V+D  A+ +EA  
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  361  EYGIRLTPWEQLPKDASAIVAAVSHREYLAMSLAELTSRLKQGGVFTDVKSAYDPDAIRA  420
             +G+ L    +L K    ++ AV+H++Y+     +  + +K+ G+  D+K+  ++D +  
Sbjct  360  FFGLDLIDTKEL-KMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNV  417

Query  421  AGFRLWRL  428
            +  RLWRL
Sbjct  418  SQ-RLWRL  424

148) Alide2_0711 in NC_015422


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  390 bits (1466),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 237/410 (58%), Positives = 316/410 (78%), Gaps = 3/410 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKHRPVLGFDVNAARIAELQSGRDSTLEVSPGDLRAATHLRY  66
            +IA++GLGYVGLP+AV FG+ + V+GFD+N +RI EL++  D T EV+   L+  T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  67   SASTEDLRDCRVFIVTVPTPVDKANRPNMTPLIKASETVGTVMPEGAVVIYESTVYPGAT  126
            ++++EDL+    +I++VPTP+DK N+P++ PL+KASETVG V+  +++V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCVPVLEKFSGKEFNVSFFCGYSPERINPGDKEHRLPTIKKVTSGSTPEVAEAVDQLY  186
            EE CVPVLEK+SG      FF GYSPERINPGDK H + TI KV SG T EV E V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  KQIITAGTHKASSIKVAEAAKVIENTQRDINIALMNELSLIFHRLGIDTLEVLQAAGTKW  246
              ++TAG HKASSIKVAEAAKVIENTQRD+NIALMNEL++IF++L+IDT EVL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLSFRPGLVGGHCIGVDPYYLTHKAQEVGYHPEVILAGRRVNDNMANHVADQTVKLMLR  306
            NFL+F+PGLVGGHCIGVDPYYLTHKAQEVG HPEVILAGRR+NDNMA+ +A + +K +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KGLPVLGSKVLVLGLTFKENCPDVRNTKVVDIVRRLQGYNTQVDVFDPWINLEEAEHEYG  366
            +GL V G+ V VLGLTFKENCPD+RNTKV++I+  L+ Y  +V V D   + +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LKCLAEMPAPGQYAAVVLAVGHHQFMTLGEVGIKALGQRDAVLFDVKGIL  416
            L  L +         V++AV H ++M     +   L +  +++FD+KGI+
Sbjct  363  LD-LIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGII  410

149) Reut_B5375 in NC_007348


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  389 bits (1464),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 225/416 (55%), Positives = 319/416 (77%), Gaps = 3/416 (0%)

Query  7    KIAIIGLGYVGLPLAVEFGKQRQVVGFDINAVRIDELRSGQDSTLEVSHDDLRGARSLKF  66
            +IA++GLGYVGLP+AV FG++++V+GFDIN  RI EL++  D T EV+++ L+ + ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   SCDPADLKDCQVFIVTVPTPVDRAKRPDLTPLIRASETVGRVMGQDAVVIYESTVYPGAT  126
            + ++ DLK  + +I++VPTP+D+ ++PDL PL++ASETVG+V+  D++V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCVPLLEQHSGLKFNVDFYCGYSPERINPGDKEHRLPDIRKVTSGSTPEVSVAIDELY  186
            EE CVP+LE+ SGL    DF+ GYSPERINPGDK H +  I KV SG T EV   + ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  RRIIVAGTHRASSIRVAEAAKVIENTQRDVNIALMNELSLLFHRLGIDTLEVLKAAGTKW  246
              ++ AG H+ASSI+VAEAAKVIENTQRDVNIALMNEL+++F++L+IDT EVLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYHPQVILAGRRINDRMAIHVADELVKLMLR  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQEVG HP+VILAGRRIND MA  +A +++K +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  RGISVLGSRILMLGLTFKENCPDVRNTKAVDIVTTLRGYNASIDVYDPWIDVEEAEAEYG  366
            +G+ V G+ + +LGLTFKENCPD+RNTK ++I+  L+ Y  ++ V D   D +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LACLRELPRHDQYDAIVLAVPHHQFVTMGVRAIRAFGKSHAVLFDVKGILPRSDVD  422
            L  L +       D +++AVPH +++    +    + K  +++FD+KGI+   +++
Sbjct  363  LD-LIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

150) F92_03250 in NC_019537


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  389 bits (1464),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 227/424 (54%), Positives = 328/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYYSQVILSGRRINDGMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G  ++VIL+GRRIND M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

151) wbtE in NC_019551


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  389 bits (1464),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 227/424 (54%), Positives = 328/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYYSQVILSGRRINDGMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G  ++VIL+GRRIND M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

152) wbtE in NC_009749


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  389 bits (1464),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 227/424 (54%), Positives = 328/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYYSQVILSGRRINDGMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G  ++VIL+GRRIND M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

153) FTL_0596 in NC_007880


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  389 bits (1464),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 227/424 (54%), Positives = 328/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYYSQVILSGRRINDGMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G  ++VIL+GRRIND M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

154) wecC in NC_008369


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  389 bits (1464),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 227/424 (54%), Positives = 328/424 (78%), Gaps = 3/424 (0%)

Query  13   KVSLVGLGYVGLPIAIAFAKKIDVLGFDICETKVQHYKDGFDPTKEVGDEAVRNTTMKFS  72
            ++++VGLGYVGLP+A++F++K  V+GFDI E+++++ K+ +D T+EV ++ ++NT + ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   CDETSLKECKFHIVAVPTPVKADKTPDLTPIIKASETVGRNLVKGAYVVFESTVYPGVTE  132
             +   LK   F I+AVPTP+  ++ PDL P++KASETVG+ +  ++ VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILEKESGLRSGEDFKVGYSPERINPGDKVHRLETIIKVVSGMDEESLDTIAKVYE  192
            + CVP+LEK SGL  G DF VGYSPERINPGDKVH +ETI KVVSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVDAGVYRASSIKVAEAAKVIENSQRDVNIAFVNELSIIFNQMGIDTLEVLAAAATKWN  252
             VV AGV +ASSIKVAEAAKVIEN+QRDVNIA++NEL+IIF++++IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFKPGLVGGHCIGVDPYYLTYKAAELGYYSQVILSGRRINDGMGKFVVENLVKKLISA  312
            FLNFKPGLVGGHCIGVDPYYLT KA E+G  ++VIL+GRRIND M+K++  N++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DIPVKRARVAIFGFTFKEDCPDTRNTRVIDMVKELNEYGIEPYIIDPVADKEEAKHEYGL  372
            ++ V+ A V ++G+TFKE+CPD RNT+VI+++ EL+EYG++  + D  ADK+EAK  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  EFDDLSKMVNLDAIIIAVSHEQFKDITKQQFDRLYAHNSRKIIFDIKGSLDKSEFEKDYI  432
            ++ D   +  +D +++AV+H ++ +  K+++  L  + +  I+FDIKG ++  E++    
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG--IVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

155) DP0047 in NC_006138


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  389 bits (1462),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 240/416 (58%), Positives = 330/416 (80%), Gaps = 2/416 (0%)

Query  9    KIGIVGLGYVGLPLAVEFGKKISTIGFDLNESRVRDLVAGSDFTLECSAEELSKASELQY  68
            +I++VGLGYVGLP+AV FG+K   IGFD+NESR+++L    D T E + + L K ++++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  69   STNLEDLRDCNVYIVTVPTPIDEHKCPDLSPLVKASESLGQVLSKGDIVIYESTVYPGAT  128
            ++N EDL+  +  I++VPTPID H+ PDL PL+KASE++G+V++ + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  129  EENCVPVLERVSGLSYNKDFFAGYSPERINPGDKEHSVTMIKKVTSGSTEQIADFVDELY  188
            EE+CVPVLE+ SGL   KDFF GYSPERINPGDK H+   I KV SG T ++ ++V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  189  SSIIIAGTHKASSIRVAEAAKVIENTQRDlnialinelaiiFNKLGIDTEEVLEAAGTKW  248
            SS++ AG HKASSI+VAEAAKVIENTQRD+NIAL+NELAIIF+KL+IDT+EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  249  NFLPFRPGLVGGHCIGVDPYYLTHKAQSVGYHPEVILSGRRINDNMGSYVASQLVKALIK  308
            NFL F+PGLVGGHCIGVDPYYLTHKAQ VG HPEVIL+GRRINDNM+ Y+AS+++K L+K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  309  KRIQVEGANVLLLGLTFKENCPDLRNTKVVDIISELAQYNIQVDVYDPWVSKIEAEKEYG  368
            + ++V+GA V +LGLTFKENCPDLRNTKV++II EL +Y ++V V D    K EA K +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  369  ISPVEKPGQNKYDAVVVAVAHNEFVALGESGLQDLLREKSVVYDLKYILPRAVVDI  424
            +  ++    +  D V+ AV+H++++     +  +L+++ ++V+D+K I+    +++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

156) Rfer_0667 in NC_007908


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  388 bits (1461),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 232/423 (55%), Positives = 324/423 (77%), Gaps = 3/423 (0%)

Query  4    VAVIGLGYVGLPLVVEFGKHFRTIGFDISMSKVESCLKGVDPSRELSDEEMRASPQAVYT  63
            +AV+GLGYVGLP+ V FG+  + IGFDI+ S++    +  D + E++++ ++ +    YT
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE-YT  63

Query  64   ADPTLLAEADIIVVAVPTPVDNAHIPDFRPLIGASASAGRNMKKGAIVVYESTVYPGATE  123
            +++  L  AD+I++AVPTP+D+ + PD+ PL+ AS + G+ +  ++IVVYESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  124  EVCIPVLERESGLKWKQDFFVGYSPERINPGDKEHTLTKILKVVSGDSPDTLDQVARLYE  183
            E C+PVLE+ SGL   +DFFVGYSPERINPGDK HT+  I KVVSG++ + L+ VA +Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  184  TIILPGVHRASSIKAAEAAKVIENTQRDLNISLMNELSIIFDKLGIDTTEVLAAAATKWN  243
            +++ +GVH+ASSIK AEAAKVIENTQRD+NI+LMNEL+IIFDKL+IDT EVL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  244  FLNFKPGLVGGHCIGVDPYYLTHKAEMLGYTPQVILAGRRINDGMGKFIAEQTIKQMIAA  303
            FLNFKPGLVGGHCIGVDPYYLTHKA+ +G  P+VILAGRRIND M+K+IA + IK+++  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  304  GSYVKGAKVNVLGLTFKENCGDLRNSKVIDIINELKSYGVEVFVTDPRAKSDEAMHEYGV  363
            G  V+GA VNVLGLTFKENC DLRN+KVI+II+ELK YG++V V D  A  +EA   +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  364  SLLPWADLPRADAIVAAVAHREFAELTAEDFGKKLIRGGAFIDVKAAFDSGAIEGAGYKL  423
             L+   +L   D ++ AV+H+++ E    D+ + +   G  +D+K+ ++S+ ++ +  +L
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ-RL  421

Query  424  WRL  426
            WRL
Sbjct  422  WRL  424

157) Fleli_1211 in NC_018018


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  388 bits (1458),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 243/422 (58%), Positives = 325/422 (78%), Gaps = 6/422 (1%)

Query  1    MTYKLAIIGLGYVGLPLAAEFGKKYFTIGFDINKNRIEELKKGYDRTLEVNKEELKASEH  60
            M  ++A++GLGYVGLP+A  FG+K   IGFDIN +RI ELK+ YDRT EV  + LK + +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-N  59

Query  61   LSFTTSLEKLAEASIYIVTVPTPVDVYKKPDLKPILAASKTVGKVLKKGDIVVYESTVYP  120
            + +T++ E L  A + I++VPTP+D  +KPDL P+L AS TVGKV+  + IVVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GCTEEDCVPILEKESGLKFNQDFFCGYSPERINPGDKEHTISKIKKVVSGSTPKIAQQLN  180
            G TEE+CVP+LEK SGL   +DFF GYSPERINPGDK HT+  I KVVSG T  + + + 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  ELYGSIITAGTHLASSIKVAEASKVIENAQRDLNIAFVNELALIFEKMDIDTLEVLEAAG  240
            ++Y+S++TAG H ASSIKVAEA+KVIEN+QRD+NIA++NELA+IF+K+DIDT EVL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFKPGLVGGHCIGVDPYYLTYKAESLGYHPEVILAGRRINDTMGVFVASKVIKL  300
            TKWNFL FKPGLVGGHCIGVDPYYLT KA+ +G HPEVILAGRRIND M+ ++AS+VIK 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  MIQQSTNVKNAKILVLGITFKENCPDIRNSRVIDVIREFQDFGANVEVYDPWADAAEVKH  360
            +++Q+ +V+ A + VLG+TFKENCPD+RN++VI++I E++++G NV V D  AD  E K 
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  361  EYNLDLIKEPSQNYDAIVL-AVSHKEF--DSLDFENLKNEKTIIYDIKGKIDKS--KVTA  415
             + LDLI     +   +VL AV+HK++  +  D+ NL ++  I++DIKG I+    +V+ 
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELNVSQ  419

Query  416  RL  417
            RL
Sbjct  420  RL  421

158) BN69_2394 in NC_018485


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  388 bits (1459),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 239/416 (58%), Positives = 315/416 (76%), Gaps = 3/416 (0%)

Query  5    NETIAVVGLGYVGLPIAVEFGKIRPVVGFDIQPHRIAELRSGHDSTREVECSELAGAQHL  64
            N  IAVVGLGYVGLP+AV FG+ + V+GFDI+  RI EL++  D T EV  + L  + ++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NI  60

Query  65   TYTSDPNDMKCCRIFIVAVPTPVDQAQRPDMTLLKKASDTVGRVMERGSIVVFESTVYPG  124
             YTS+++D+K   ++I+AVPTP+D+ ++PD+  L KAS+TVG+V+  ++IVV+ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  CTREICVPILEATSGLAFNKDFFVGYSPERINPGDKMHRLPTITKVTSGSTPEAADAVDA  184
             T E CVP+LE  SGL   KDFFVGYSPERINPGDK+H + TITKV SG T E  + V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYKSIVVAGTHKASSIEVAEAAKVIENTQRDLNIALMNELAIIFHKLGIDTQDVLAAAGT  244
            +Y S+V AG HKASSI VAEAAKVIENTQRD+NIALMNELAIIF+KL+IDT++VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLRFTPGLVGGHCIGVDPYYLTHRAQEVGYHPEVILAGRRINDRMGPYVADRVARLM  304
            KWNFL F PGLVGGHCIGVDPYYLTH+AQEVG HPEVILAGRRIND M+ Y+A  V + +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  MRNQFPVVGSRILVMGLTFKENCPDLRNSKVVDVIESLREFHAEVDVFDPWANAEEAEHE  364
            +++ + V G+ + V+GLTFKENCPDLRN+KV+++IE L+E+  +V V D  A+ +EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  TGVKLITSLPDGMLYDAIIVTTAHKEFIEMGPKRLRALGKPRAILFDTKGIFARAE  420
             G+ LI +  +  + D ++ + +HK+++E   K    L K  +I+FD KGI+   E
Sbjct  361  FGLDLIDT-KELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE  414

159) Snov_3207 in NC_014217


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  388 bits (1459),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 233/413 (57%), Positives = 323/413 (79%), Gaps = 2/413 (0%)

Query  10   RLAVIGLGYVGLPVAVEFGKHHPVVGFDINPARIEALRQGIDATLEVSAQELAEAHLLSF  69
             +AV+GLGYVGLPVAV FG+ H V+GFDIN +RI  L++  D T EV+ + L ++++  +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EY  62

Query  70   SAELEDLRACTTFIVTVPTPIDGHKRPDLTPLLRASETVGKVLKRGDVVVYESTVYPGAT  129
            +++ EDL+    +I++VPTPID H++PDL PLL+ASETVGKV+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  130  EDDCVPVLERVSGLVFNRDFFVGYSPERINPGDRRHRLATIRKVTAGSTPEAAEFVDALY  189
            E++CVPVLE+ SGLV  +DFFVGYSPERINPGD+ H + TI KV +G T E  E+V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  190  AGIVTAGTFKAESIRVAETAKVIENTQRDlnialinelaiiFNRMGIDTEAVLKAAETKW  249
            +++VTAG  KA SI+VAE+AKVIENTQRD+NIAL+NELAIIF++++IDT+ VLKA+ TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  250  NFLPFRPGLVGGHCIGVDPYYLTHKAQTVGYHPEIILAGRRLNDGMGAYVAAQLVKAMLK  309
            NFL F+PGLVGGHCIGVDPYYLTHKAQ VG HPE+ILAGRR+ND M+ Y+A++++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  310  RRIQVEGARVLVMGLTFKENCPDLRNTRVVDVMRELKDFGVEVDVHDPWVSADEARHEYG  369
            + ++V+GA V V+GLTFKENCPDLRNT+V++++ ELK++G++V V+D     +EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  370  IAVIAEPEAASYDGIVLAVAHEAFRSMGAEAIRAYGKPEHVLYDLKYILPRDE  422
            + +I   E    D +++AV+H  +     + I    K   +++D+K I+  DE
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

160) PGA2_239p2030 in NC_018421


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  388 bits (1459),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 219/413 (54%), Positives = 313/413 (76%), Gaps = 2/413 (0%)

Query  6    RICVIGLGYVGLPLAVEFGRSRPVVGFDISAERIDALRAGEDSTREIsaealssaahltl  65
             I V+GLGYVGLP+AV FG  + V+GFDI+  RI  L+   D T E++ + L ++     
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  66   taDPAEIADCTIFIVTVPTPIDDSRRPDLTPLLRASETVGRFLKPGDLVIYESTVYPGAT  125
            + ++ ++    ++I++VPTPID   +PDL PLL+ASETVG+ + P+ +V+YESTVYPGAT
Sbjct  64   S-NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  126  EEDCVPVLERLSGLTFNRDFYAGYSPERINPGDKTRRLPDIVKVTSGSTPETAERVDALY  185
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK + +  I KV SG T E  E V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  186  REIVVAGTHKAESIRIAEAAKVIENSQRDINIALINELAKIFNRMDIDTEAVLRAAGTKW  245
              +V AG HKA SI++AEAAKVIEN+QRD+NIAL+NELA IF+++DIDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  246  NFLNFRPGLVGGHCIGVDPYYLTHKAEQLGYHPEILLAGRRLNDGMGSYVASQMVKSMLK  305
            NFLNF+PGLVGGHCIGVDPYYLTHKA+++G HPE++LAGRR+ND M+ Y+AS+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  306  RRMAVADARVLVMGLTFKENCPDLRNTRVIDVVRCLEEFGLTVDVHDPHADPDEARAEYG  365
            + + V +A V V+GLTFKENCPDLRNT+VI+++  L E+GL V V+D +AD +EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  366  VDLVADPEAGSYDGMVLAVAHQEFRDMGATQIRALGRADALLYDLKYVLTPDQ  418
            +DL+   E    D +++AV+H+++ +    +   L +  ++++D+K ++ +D+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE  414

161) DEFDS_0339 in NC_013939


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  388 bits (1458),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 246/425 (58%), Positives = 325/425 (77%), Gaps = 4/425 (0%)

Query  2    KIAVIGLGYVGLPLAVAFAKEFDVIGFDIKRERVDELKNGIDSTGEVSSEKLKSVSIKFT  61
            +IAV+GLGYVGLP+AV+F++   VIGFDI+  R+ ELKN  D T EV+ +KLK+ +I +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  62   NNPEDLKEAYFYIVTVPTPIDNHKNPDLKPLIKASEVVGKYLKKGDYVVYESTVYPGVTE  121
            +N+EDLK A F I++VPTPID+H++PDL PL+KASE VGK +  +  VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  122  EICVPILEQESGLKFINDFKVGYSPERINPGDKIHTFENIIKVVSGCDKESLERIAEVYG  181
            E CVP+LE+ SGL   +DF VGYSPERINPGDK+HTFE I KVVSG   E LE +A+VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  182  KVVKAGIYKAESIKVAEAAKVIENTQRDLNIALMNELALIFDKMNIDTKNVLEAAGTKWN  241
             VV AG+ KA SIKVAEAAKVIENTQRD+NIALMNELA+IFDK++IDT++VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  242  FLKFEPGLVGGHCIGVDPYYLTFKAQEIGYHPQVILAGRKINDYMGKFIAEKTVKLLIKN  301
            FL+F PGLVGGHCIGVDPYYLT KAQE+G HP+VILAGR+IND M+K+IA + +K L+K+
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  302  DKLVKNAKILILGFTFKENIPDIRNTRVIDIYNELIEYGTNPIVYEPVASKEDIESEYEI  361
            +  V+ A + +LG+TFKEN PD+RNT+VI+I +EL EYG N  V +  A K++    + +
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  362  KMLDSINNINKEFDAIIMAVKHDIFLKELKKKVIENLLTENGVFVDVKGVMKDKLNDARF  421
             ++D+ +   K  D ++ AV H  ++ +  KK   NL+ + G+  D+KG+++    +   
Sbjct  364  DLIDTKE--LKMVDVVLFAVPHKDYMEN--KKDYINLVKDCGIVFDIKGIINSDELNVSQ  419

Query  422  TYWRL  426
              WRL
Sbjct  420  RLWRL  424

162) Nitsa_1731 in NC_014935


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  387 bits (1456),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 230/427 (54%), Positives = 332/427 (78%), Gaps = 19/427 (4%)

Query  3    KIAVIGLGYVGLPLAHAFSEKYPVTGFDIAQWRIDELRRGYDRTLELSEAQVKEAIANGM  62
            +IAV+GLGYVGLP+A +F++K  V GFDI + RI EL+  YDRT E++E ++K++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  63   QFTNKLDEIAECNVYIVTVPTPIDKHKRPDLTPLIKASESIGKVLKPGDIVIYESTVYPG  122
            ++T++ +++   +  I++VPTPIDKH++PDL PL+KASE++GKV+ P+ IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  ATEEVCVPILEKVSGLKYISSDSPTTENGFYCGYSPERINPGDKEHTVTKILKVTSGSTP  182
            ATEE CVP+LEK SGL           ++F+ GYSPERINPGDK HT   I KV SG T 
Sbjct  121  ATEEECVPVLEKYSGL--------VCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTL  172

Query  183  EIAKKIDELYASVITAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAIIFNKLGIDTQ  242
            E+   + ++Y+SV+TAG H A+SIKVAEAAKVIEN+QRD+NIA++NELAIIF+KL+IDT+
Sbjct  173  EVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTN  232

Query  243  AVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYYPEIILAGRRLNDQMGIYV  302
             VL A+GTKWNFL F+PGLVGGHCIGVDPYYLTHKAQEVG  PE+ILAGRR+ND+M+ Y+
Sbjct  233  EVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYI  292

Query  303  ANQVVKLMIKKGQRIEGGKVLVLGITFKENCPDIRNSRVIDVIRELQEFGTQVDVFDPWA  362
            A++V+K ++K+G  ++G+ V VLG+TFKENCPD+RN++VI++I EL+E+G +V V D  A
Sbjct  293  ASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEA  352

Query  363  DPEEVKHEYGISLVPEESLQLDAYDAIVLAVAHNEFKN-----LDLESDEHRVVYDIKSM  417
            D +E K  +G+ L+    L++   D +++AV+H+++ +     ++L   +  +V+DIK++
Sbjct  353  DKNEAKKFFGLDLIDTKELKMV--DVVLFAVPHKDYMENKKDYINL-VKDCGIVFDIKGI  409

Query  418  LDGKRVD  424
            +++  ++
Sbjct  410  INSDELN  416

163) PGA1_262p02300 in NC_018291


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  387 bits (1456),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 218/413 (53%), Positives = 313/413 (76%), Gaps = 2/413 (0%)

Query  6    RICVIGLGYVGLPLAVEFGRSRPVVGFDISAERIDALQAGEDSTREIsaealssaahltl  65
             I V+GLGYVGLP+AV FG  + V+GFDI+  RI  L+   D T E++ + L ++     
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  66   taDPAEIADCTIFIVTVPTPIDDSRRPDLTPLLRASETVGRVLKPGDLVIYESTVYPGAT  125
            + ++ ++    ++I++VPTPID   +PDL PLL+ASETVG+V+ P+ +V+YESTVYPGAT
Sbjct  64   S-NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  126  EEDCIPVLERLSGLTFNRDFYAGYSPERINPGDKTRRLPDIVKVTSGSTPKTAERVDALY  185
            EE+C+PVLE+ SGL   +DF+ GYSPERINPGDK + +  I KV SG T    E V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  186  REIVVAGTHKAESIRVAEAAKVIENSQRDINIALINELAKIFNRMDIDTEAVLRAAGTKW  245
              +V AG HKA SI+VAEAAKVIEN+QRD+NIAL+NELA IF+++DIDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  246  NFLNFRPGLVGGHCIGVDPYYLTHKAEQLGYHPEILLAGRRLNDGMGSYVASQMVKSMLK  305
            NFLNF+PGLVGGHCIGVDPYYLTHKA+++G HPE++LAGRR+ND M+ Y+AS+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  306  RRMAVADARVLVMGLTFKENCPDLRNTRVIDVVRCLEEFGLTVDVHDPHADPDEARAEYG  365
            + + V +A V V+GLTFKENCPDLRNT+VI+++  L E+GL V V+D +AD +EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  366  VDLVAEPQAGSYDGMVLAVAHQEFRDMGAAQIRALGRADALLYDLKYVLTPDQ  418
            +DL+   +    D +++AV+H+++ +    +   L +  ++++D+K ++ +D+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE  414

164) Bphyt_4704 in NC_010676


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  387 bits (1455),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/386 (59%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  8    KLAVIGLGYVGLPLAVEFSKHRPVVGFDINGARISALREGRDVTLEVCNEELAAATGMTF  67
            ++AV+GLGYVGLP+AV F++ + V+GFDIN +RI  L++  D T EV ++ L   T + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  68   TSDAQELNACNVYIATVPTPIDDYKRPDLRPLIGASETIGSVLKKNDVVIYESTVYPGAT  127
            TS+A++L+  +  I +VPTPID  ++PDL PL+ ASET+G V+  + +V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEECVPVLERVSGLKFNVDFFVGYSPERINPGDKAHRVTDIKKVTSGSTPETAELVDQLY  187
            EEECVPVLE+ SGL    DFFVGYSPERINPGDK H    I KV SG T E  E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  REIIVAGTHKASSIRVAEAAKVIENTQRDVNIALINELSIIFNKMGIDTESVLQAAGTKW  247
              ++ AG HKASSI+VAEAAKVIENTQRDVNIAL+NEL+IIF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVASQLVKALTK  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+AS+++K L K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RQIGVAGARVLIMGLTFKENCPDLRNTKVVDIVAELREYGVQVDVYDPWVSKEDARREHN  367
            + + V GA V ++GLTFKENCPDLRNTKV++I+ EL+EYG++V V D    K++A++   
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  LDPIEHPAKGVYDATIVAVAHRRFLE  393
            LD I+     + D  + AV+H+ ++E
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME  388

165) HMPREF0409_01486 in NC_021281


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  387 bits (1454),  Expect = 7e-109, Method: Compositional matrix adjust.
 Identities = 237/427 (56%), Positives = 332/427 (78%), Gaps = 6/427 (1%)

Query  6    KICVVGMGYVGLPLAIAFAEKDFDVIGFDLNQKKIDKYLQGIDPTNEVGNEKIRNIKNLE  65
            +I VVG+GYVGLP+A++F++K+  VIGFD+N+ +I    +  D TNEV ++K++N  N+E
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIE  61

Query  66   FTSDEKKISEASFIIVAVPTPVLENKSPDFRPLIGASTIIGRNMKKSSIVVYESTVYPGA  125
            +TS+   +  A FII+AVPTP+  ++ PD+ PL+ AS  +G+ +   +IVVYESTVYPGA
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  126  TEEVCLPILEKESGMRCGIDFKIGYSPERVNPADKENTLTKIKKITSGIDKESSNIIAEV  185
            TEE C+P+LEK SG+ CG DF +GYSPER+NP+DK +T+  I K+ SG   E  +I+A+V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  186  YGSIIEAGIHRASSIKVAEAAKVIENSQRDINIAFINELALIFDRIGIDTLEVLEAAGTK  245
            Y+S++ AG+H+ASSIKVAEAAKVIEN+QRD+NIA++NELA+IFD+++IDT EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  246  WNFLPYRPGLVGGHCIGVDPYYLADKANKLGYHAQVILAGRRINDSMAKFVAEKTIKKLI  305
            WNFL ++PGLVGGHCIGVDPYYL++KA+ +G H++VILAGRRIND+MAK++A + IK L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  306  NANIRVKGADILVMGLTFKENCPDLRNSKVNDIILELREYGVNVHVVDPMADKIEAKKEY  365
            +  + V+GA + V+GLTFKENCPDLRN+KV +II EL+EYG+NV V D  ADK EAKK +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  366  NIDLEDPKDIKNMDAIIVAVGHKEYRDMDIKDLHKYYNEVYSKPLLIDVKSIFNKEEAEK  425
             +DL D K++K +D ++ AV HK+Y  M+ K    Y N V    +++D+K+I+N +E + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDY--MENK--KDYINLVKDCGIVFDIKGIINSDELNV  417

Query  426  EYDYWRL  432
                WRL
Sbjct  418  SQRLWRL  424

166) Rvan_0399 in NC_014664


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  386 bits (1452),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 222/411 (55%), Positives = 308/411 (75%), Gaps = 3/411 (0%)

Query  5    DKTIGVIGLGYVGLPLAVEFGKIRSVVGFDVSAARVADLREGIDRTREVEPHELAAARYL  64
            ++ I+V+GLGYVGLP+AV FG+ + V+GFD++ +R+ +L++  DRT EV  + L  +  +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-I  60

Query  65   TYTTSLEELRSCGVFIVAVPTPIDAAKRPDITLLKRAAESVGKVISRGGVAIFESTVYPG  124
             YT++ E+L+  + +I+AVPTPID  ++PD+  L +A+E+VGKVI+ + + ++ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  CTVNDCVPIIAKHSGLTFNRDFFVGYSPERINPGDKLHRLTSIMKVSSGSTPGAAEAIDR  184
             T ++CVP++ K SGL   +DFFVGYSPERINPGDK+H + +I KV SG T    E +  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYASIITAGTYKAASIEVAEAAKVIENTQRDLNIALMNELALIFHKLGLDTGEVLAAAAT  244
            +Y+S++TAG  KA+SI VAEAAKVIENTQRD+NIALMNELA+IF+KL++DT EVL A++T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLPFKPGLVGGHCIGVDPYYLTHRAQEIGYHPEVVLAGRRINDGMGGHVADRVARLL  304
            KWNFL FKPGLVGGHCIGVDPYYLTH+AQE+G HPEV+LAGRRIND M+  +A  V + L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  MKRGLPVVGSRILVMGLTFKENCPDLRNSRVIDLIRELKGFNATVEVWDPRADPAEAHKE  364
            +K+GL V G+ + V+GLTFKENCPDLRN++VI++I ELK +   V V D  AD  EA K 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  FGITLESGEPAASRYDAVILAVGHSEFAEMGPARVRALGRPEAVLFDVKGL  415
            FG+ L  +       D V++AV H ++ E     +  L +  +++FD+KG+
Sbjct  361  FGLDL-IDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGI  409

167) Ppha_0623 in NC_011060


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  386 bits (1450),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 229/431 (54%), Positives = 330/431 (77%), Gaps = 18/431 (4%)

Query  6    IAVVGLGYVGLPLAVEFAKKYPVVGFDIKQERVGELGQGYDATLEVTSEELKSVLCESNY  65
            IAVVGLGYVGLP+AV F++K  V+GFDI++ R+ EL + YD T EVT + LK+   + +Y
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT--NIEY  62

Query  66   NGEEGSPGLFVSSDSSDLGAVNYYIVTVPTPTDKNNRPDLSPLLKASETIGRVLKMGDIV  125
                       +S++ DL   ++ I++VPTP DK+N+PDL PLLKASET+G+V+  + IV
Sbjct  63   -----------TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIV  111

Query  126  IYESTVYPGATEEDCVPVLERFSGLTFNRDFFAGYSPERINPGDKEHTVTKIKKVTSGST  185
            +YESTVYPGATEE+CVPVLE++SGL   +DFF GYSPERINPGDK HT   I KV SG T
Sbjct  112  VYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQT  171

Query  186  PDIATKVDSLYRSIIVAGTHLASSIRVAEAAKVIENSQRDINIAFVNELSVIFNRMGIDT  245
             ++   V  +Y S++ AG H ASSI+VAEAAKVIEN+QRD+NIA++NEL++IF++++IDT
Sbjct  172  LEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDT  231

Query  246  HEVLAAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDNMGKY  305
            +EVL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+NDNM+KY
Sbjct  232  NEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKY  291

Query  306  IASQVIKLMIARDHKIKGAKILMLGITFKENCPDIRNTRAVDIVNELKQYGAEVDIHDPW  365
            IAS+VIK ++ ++  ++GA + +LG+TFKENCPD+RNT+ ++I++ELK+YG +V ++D  
Sbjct  292  IASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVE  351

Query  366  ANPEEVMHEYGFECLHELNGNHYEAIILAVAHDAFAALDIRSLSSGIN--AVIYDVKGVL  423
            A+ +E    +G++ ++  + +  + +++AV+H  +   + +   + ++  ++++D+KG++
Sbjct  352  ADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGII  410

Query  424  PID--KVSGRL  432
              D  +VS RL
Sbjct  411  NSDELNVSQRL  421

168) Mesau_05056 in NC_019973


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  386 bits (1450),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 223/414 (54%), Positives = 309/414 (75%), Gaps = 2/414 (0%)

Query  5    SRKIAVIGLGYVGLPLAVAFGATRDVIGFDINPSRVEALKRGEDHTLEASEEEIAAARGL  64
            +R+IAV+GLGYVGLP+AV+FG  + VIGFDIN SR+  LK   D+T E +E+ +  +  +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NI  60

Query  65   KFTSEKADLHDCGIFIVTVPTPIDRANRPDLKPLVMASTTVGEVISPGAVVIFESTVYPG  124
             +TS+  DL   +++I++VPTPID+ N+PDL PL+ AS TVG VI+P+++V++ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  CTQEVCAPLIEKHSGLRYNSDFFLGYSPERINPGDREHRLQTIVKVTSGSTPEAAEAIDA  184
             T+E C P++EK SGL    DFF+GYSPERINPGD+ H ++TI KV SG T E  E +  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYASIVPAGTHRASSIAVAEAAKVIENTQRDLNIALMNELSLIFGKLGIDTSEVLEAAGT  244
            +Y+S+V AG H+ASSI VAEAAKVIENTQRD+NIALMNEL++IF+KL+IDT+EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLRFTPGLVGGHCIGVDPYYLTHKAQELGYHPEVILAGRRINDGMGQHAADQTARLM  304
            KWNFL F PGLVGGHCIGVDPYYLTHKAQE+G HPEVILAGRRIND M++  A +  + +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  MRKGIPVVGSRILVMGAAFKENCPDLRNSKVVDVVAQLRQYNAGIDIWDPWVDAQECARA  364
            +++G+ V G+ + V+G +FKENCPDLRN+KV++++ +L++Y   + + D   D +E  + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  FGTASVKEMPAARYDGVIVAVGHAQFRSLGVAGLKSLCKDPSVIYDIKGLFPRD  418
            FG   +        D V+ AV H ++      +  +L KD ++++DIKG++  D
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSD  413

169) Nhal_0565 in NC_013960


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  386 bits (1453),  Expect = 8e-109, Method: Compositional matrix adjust.
 Identities = 226/415 (55%), Positives = 320/415 (78%), Gaps = 2/415 (0%)

Query  8    RIGIIGLGYVGLPLAVEFGKKFPTLGFDINSTRITELKEGYDSTLEVEPELLAAANQLQY  67
             I+++GLGYVGLP+AV FG+K   +GFDIN +RI ELK+ YD T EV  + L  +N ++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  68   TRQLQDLADCNVYIITVPTPIDEHKRPDLRPLESASSTVGKVLKPGNIAIFESTVYPGAT  127
            T + +DL   +  II+VPTPID H++PDL PL  AS TVGKV+ P+ I ++ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEVCVPILEQESGLIYNRDFFAGYSPERINPGDKQHRVTSIRKVTSASTAEAAEFVDQLY  187
            EE CVP+LE+ SGL+  +DFF GYSPERINPGDK H   +I KV S+ T E  E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  GTIITAGTHRTSSIRVAEAAKVIENTQRDVNIALINELAMLFNRLGIDTQEVLQAAATKW  247
            ++++TAG H++SSI+VAEAAKVIENTQRDVNIAL+NELA++F++L+IDT+EVL+A++TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGIDPYYLTHKAQAIGFQPEMILAGRRVNDGMGSYVASQVVKLMTQ  307
            NFL F+PGLVGGHCIG+DPYYLTHKAQ +G +PE+ILAGRR+ND M+ Y+AS+V+K + +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIHVVDSRILILGLTFKENCPDLRNTRVTDIIAELEGYHAQVDIYDPWADAKEALKEYG  367
            + ++V ++ + +LGLTFKENCPDLRNT+V +II EL  Y  +V + D  AD +EA K +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  ITLVTSLNKGYYDAIVVTVAHQQFAEFSAEGIRALGKPGSILYDVKHLLPKETVD  422
            + L+ + +    D ++ +V+H+++ E   + I  L K  +I++D+K ++  + ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

170) Metme_1268 in NC_015572


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  386 bits (1453),  Expect = 9e-109, Method: Compositional matrix adjust.
 Identities = 234/406 (58%), Positives = 315/406 (78%), Gaps = 2/406 (0%)

Query  6    KIGMIGLGYVGLPLAVEFGQKYPTVGFDINHHRITELQSGNDHTLEVSSAELAEATQLTY  65
            +I+++GLGYVGLP+AV FG+K   +GFDIN+ RI EL++  D+T EV+   L + T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  66   SSHMQDIADCTVYIVTVPTPINEHKQPDLTPLQKASDLLGQVIKADDIVIYESTVYPGAT  125
            +S+ +D+      I++VPTPI+ H++PDL PL KAS+ +G+VI +D IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  126  EEVCVPILEKVSGLKFNRDFYVGYSPERINPGDKQHRVTNILKVTSGSTPEIAEKVDQLY  185
            EE CVP+LEK SGL   +DF+VGYSPERINPGDK H    I KV SG T E+ E V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  186  KSIITAGTHKASSIKVAEAAKVIENTQRDVNIALINELALIFNKLSIDTEEVLLAAGTKW  245
             S++TAG HKASSIKVAEAAKVIENTQRDVNIAL+NELA+IF+KL IDT+EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  246  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYNPEVILSGRRINDSMGAYVVSQLIKLMLK  305
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G +PEVIL+GRRIND+M+ Y+ S++IK +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  306  KRIQVQDARVLIMGLTFKENCPDIRNTRVVDIVAELKTYGITVDVYDPWVNGDETFEEYG  365
            + ++VQ+A V ++GLTFKENCPD+RNT+V++I+ ELK YG+ V V D   + +E+   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  366  IRPIVQPSRGKYDAMILAVAHEEFKEMPINDIRALGKEQSIIYDLK  411
            +  I        D +++AV+H ++ E   +D   L K+ +I++D+K
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIK  407

171) PLES_19091 in NC_011770


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1449),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 230/386 (60%), Positives = 310/386 (81%), Gaps = 1/386 (0%)

Query  5    KVAVVGLGYVGLPLAVEFGKKRTVVGFDINQGRIAELRQGIDSTLEVDAAELKEASELSF  64
            ++AVVGLGYVGLP+AV FG+K+ V+GFDIN++RI EL++  D T EV    LK+ +++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  65   TFNLQDLQKCNVFIVTVPTPIDEHKQPDLTPLVKASESIGKVLKKGDIVIYESTVYPGAT  124
            T N +DL+K + +I++VPTPID H++PDL PL+KASE++GKV+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  125  EEDCVPVLEKFSGLRFNEDFFAGYSPERINPGDKEHRVSSIKKVTSGSTPEIAELVDSLY  184
            EE+CVPVLEK+SGL    DFF GYSPERINPGDK H   +I KV SG T E+ E+V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  185  REIITAGTHKASSIKVAEAAKVIENTQRDlnialinelaiiFNRMGIDTEAVLKAAGTKW  244
              ++TAG HKASSIKVAEAAKVIENTQRD+NIAL+NELAIIF++++IDT+ VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  245  NFMPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDGMGAYVVSQLVKAMLK  304
            NF+ F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND M+ Y+ S+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  305  RRIHVDGARVLLMGLTFKENCPDLRNTKVVDIVRELAEYNIQVDVFDPWVSAEDAMHEYG  364
            + ++V+GA V ++GLTFKENCPDLRNTKV++I+ EL EY ++V V D     ++A   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  365  ITPVGTPSHGAYDGIILAVAHSEFKN  390
            +  ++T      D +++AV+H ++ +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME  388

172) PAM18_1813 in NC_017548


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1449),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 230/386 (60%), Positives = 310/386 (81%), Gaps = 1/386 (0%)

Query  5    KVAVVGLGYVGLPLAVEFGKKRTVVGFDINQGRIAELRQGIDSTLEVDAAELKEASELSF  64
            ++AVVGLGYVGLP+AV FG+K+ V+GFDIN++RI EL++  D T EV    LK+ +++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  65   TFNLQDLQKCNVFIVTVPTPIDEHKQPDLTPLVKASESIGKVLKKGDIVIYESTVYPGAT  124
            T N +DL+K + +I++VPTPID H++PDL PL+KASE++GKV+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  125  EEDCVPVLEKFSGLRFNEDFFAGYSPERINPGDKEHRVSSIKKVTSGSTPEIAELVDSLY  184
            EE+CVPVLEK+SGL    DFF GYSPERINPGDK H   +I KV SG T E+ E+V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  185  REIITAGTHKASSIKVAEAAKVIENTQRDlnialinelaiiFNRMGIDTEAVLKAAGTKW  244
              ++TAG HKASSIKVAEAAKVIENTQRD+NIAL+NELAIIF++++IDT+ VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  245  NFMPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDGMGAYVVSQLVKAMLK  304
            NF+ F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND M+ Y+ S+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  305  RRIHVDGARVLLMGLTFKENCPDLRNTKVVDIVRELAEYNIQVDVFDPWVSAEDAMHEYG  364
            + ++V+GA V ++GLTFKENCPDLRNTKV++I+ EL EY ++V V D     ++A   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  365  ITPVGTPSHGAYDGIILAVAHSEFKN  390
            +  ++T      D +++AV+H ++ +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME  388

173) HydHO_0627 in NC_020411


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1448),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 244/424 (58%), Positives = 331/424 (79%), Gaps = 3/424 (0%)

Query  13   SICVVGLGYVGLPLAVAFARHFNVIGFDINQIRINELKLGIDRTKETTPEELLNSNILFT  72
            +I VVGLGYVGLP+AV+F+   +VIGFDIN+ RI+ELK   DRT+E T + L N+NI +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   ANEEYIKKCKFIIITVPTPIDKHKVPDLKPIFSASTIVGRNLQKDSIVVYESTVYPGLTE  132
            +N E +KK  FIII+VPTPIDKH+ PDL P++ AS  VG+ +  D+IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EECVPILEKESELKWKKDFFVGYSPERINPGDKIHRFENIVKVVSGDSEYSLNIISEIYS  192
            EECVP+LEK S L   KDFFVGYSPERINPGDK+H FE I KVVSG++   L+I++++YS
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  KVVKAGIFKAKSIKVAEAAKVIENTQRDINIALMNELSMIFHKMGIDTKDVLEAASTKWN  252
             VV AG+ KA SIKVAEAAKVIENTQRD+NIALMNEL++IF+K++IDT++VL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLKFEPGLVGGHCISVDPYYLTFKAQELGHHPEVILSGRRVNDNMPNFVVQNVLKLLIKA  312
            FL+F PGLVGGHCI+VDPYYLT KAQE+GHHPEVIL+GRR+NDNM++++  NV+K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  KKQIESSKIIIFGLSFKENIPDIRNSKVVDIYNELKDFGINTYIYDPYVYKDEVFKEYGI  372
              +++++ + ++GL+FKEN PD+RN+KV++I +ELK++G+N  + D    K+E  K +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELLQDPYEKAPYDAVIVAVKHNAFGEYDIRFYENITKSPKILIDIKSLYNKDIFLKNGFL  432
            +L++   E    D V+ AV H+ + E + + Y N+ K   I++DIK++ N D  L+ +  
Sbjct  364  DLIDTK-ELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE-LNVSQR  420

Query  433  YWSL  436
             W L
Sbjct  421  LWRL  424

174) HydSN_0642 in NC_020814


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1448),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 244/424 (58%), Positives = 331/424 (79%), Gaps = 3/424 (0%)

Query  13   SICVVGLGYVGLPLAVAFARHFNVIGFDINQIRINELKLGIDRTKETTPEELLNSNILFT  72
            +I VVGLGYVGLP+AV+F+   +VIGFDIN+ RI+ELK   DRT+E T + L N+NI +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   ANEEYIKKCKFIIITVPTPIDKHKVPDLKPIFSASTIVGRNLQKDSIVVYESTVYPGLTE  132
            +N E +KK  FIII+VPTPIDKH+ PDL P++ AS  VG+ +  D+IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EECVPILEKESELKWKKDFFVGYSPERINPGDKIHRFENIVKVVSGDSEYSLNIISEIYS  192
            EECVP+LEK S L   KDFFVGYSPERINPGDK+H FE I KVVSG++   L+I++++YS
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  KVVKAGIFKAKSIKVAEAAKVIENTQRDINIALMNELSMIFHKMGIDTKDVLEAASTKWN  252
             VV AG+ KA SIKVAEAAKVIENTQRD+NIALMNEL++IF+K++IDT++VL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLKFEPGLVGGHCISVDPYYLTFKAQELGHHPEVILSGRRVNDNMPNFVVQNVLKLLIKA  312
            FL+F PGLVGGHCI+VDPYYLT KAQE+GHHPEVIL+GRR+NDNM++++  NV+K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  KKQIESSKIIIFGLSFKENIPDIRNSKVVDIYNELKDFGINTYIYDPYVYKDEVFKEYGI  372
              +++++ + ++GL+FKEN PD+RN+KV++I +ELK++G+N  + D    K+E  K +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELLQDPYEKAPYDAVIVAVKHNAFGEYDIRFYENITKSPKILIDIKSLYNKDIFLKNGFL  432
            +L++   E    D V+ AV H+ + E + + Y N+ K   I++DIK++ N D  L+ +  
Sbjct  364  DLIDTK-ELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE-LNVSQR  420

Query  433  YWSL  436
             W L
Sbjct  421  LWRL  424

175) Neut_0226 in NC_008344


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1448),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 234/413 (57%), Positives = 324/413 (79%), Gaps = 2/413 (0%)

Query  7    KLAIIGLGYVGLPLAAEFGRKRPVTGFDINQQRIDELKNGNDFTLEVTQEELAAAKHLTF  66
            ++A++GLGYVGLP+A  FG K+ V GFDIN+ RI ELKN  D T EVT++ L  + ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   TTNIDDLRTCNCYIITVPTPIDDHKRPDLMPLIKASETVGKVLRKGDIVIYESTVYPGCT  126
            T+N +DL+  +  II+VPTPID H++PDL+PL+KASETVGKV+  + IV+YESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLERVSGLKFNRDFYCGYSPERINPGDKEHRVTTIKKVTSGSTPEIADLVDSLY  186
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H   TI KV SG T E+ ++V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NEIITVGTHKAESIKVAEAAKVIENTQRDlnialinelaliFNKMNIDTEAVLKAAGSKW  246
            + ++T G HKA SIKVAEAAKVIENTQRD+NIAL+NELA+IF+K++IDT+ VLKA+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGAYVVAQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ ++++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KRLQVDGAKVLVMGLTFKENCPDLRNTRVVDIVTELKDYNCVVDVYDPWLSSEEAQHEYS  366
            + L+V+GA V V+GLTFKENCPDLRNT+V++I+ ELK+Y   V V D     +EA+  ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  IKLIEAPESGNYDAIILAVAHRQFKDMGASSIRALGKPNAVLYDLKYVLNPQE  419
            + LI++ E    D +++AV+H+++ +     I  L K  ++++D+K ++N++E
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

176) WBGT in NC_005090


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1447),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 236/418 (57%), Positives = 329/418 (79%), Gaps = 7/418 (1%)

Query  2    KTLAIIGLGYVGLPLAVEFGKQYKVWGFDINKARIEELKSGYDRTlevekeelleSKNLH  61
            + +A++GLGYVGLP+AV FG++ KV GFDIN +RI ELK+ YDRT EV  + L ++ N++
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIE  61

Query  62   YSCNLEEIKEAQIFIVTVPTPIDQYNKPDLTPLIKASESVGKVLKKGDIVIYESTVYPGC  121
            Y+ N E++K A+++I++VPTPID+ NKPDL PL+KASE+VGKV+  + IV+YESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  122  TEEDCVPVLERFSGLKFNVDFFCGYSPERINPGDKEHRVTTIKKVTSGSTPEIANEVDAL  181
            TEE+CVPVLE++SGL    DFF GYSPERINPGDK H   TI KV SG T E+ + V  +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  182  YRSIIKAGTHKASCIKVAEAAKVIENSQRDINIAFVNELSIIFDKMGIDTLDVLEAAGTK  241
            Y S++ AG HKAS IKVAEAAKVIEN+QRD+NIA++NEL+IIFDK++IDT +VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  242  WNFLPFRPGLVGGHCISVDPYYLTHKAESLGYHSQVILAGRHINDNMGIVVANKVVKLMI  301
            WNFL F+PGLVGGHCI+VDPYYLTHKA+ +G H++VILAGR+INDNM+  +A++V+K ++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  302  KKGQKIEGTRVLMMGITFKENCPDIRNSRVIDIIKELKEFGCEIDIYDPWADKAEVMHEY  361
            K+G  ++G+ V ++G+TFKENCPD+RN++VI+II ELKE+G ++ + D  ADK E    +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  362  GVELKSLAELHKGNYGAIVMAVGHKEFREMEIKPFGA--KD-SVIYDIKGILDREMVD  416
            G++L    EL   +   ++ AV HK++ E + K +    KD ++++DIKGI++ + ++
Sbjct  362  GLDLIDTKELKMVD--VVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

177) TASI_0328 in NC_016043


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1448),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 324/416 (78%), Gaps = 2/416 (0%)

Query  7    KLAVVGLGYVGLPLAVEFGKKREVLGFDINQKRIDQLEAGEDITLEVENEELAEAKHLKF  66
            ++AVVGLGYVGLP+AV FG+K+ V+GFDIN+ RI +L    D T EV ++ L ++ ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   SSNPESLKNYNTFIVTVPTPIDDHKSPDFTPLVKASETIGGALKKGDIVIYESTVYPGAT  126
            +SN+E LK+ + +I++VPTPID H+ PD+ PL+KASET+G  +  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKYNEDFYAGYSPERINPGDKQHRVYNIKKVTSGSTPEIADLVDELY  186
            EE C+PVLEK SGL    DF+ GYSPERINPGDK H    I KV SG T E+ ++V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  KSIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALLCNRLGIDTEDVLEAAGTKW  246
             S++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA++ ++L+IDT++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGRYVVEQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M++Y+  +++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KNVKVVGSHVLVMGLTFKENCTDIRNTRIVDIVEELKDYNIHVDVYDPWVDPEEAQQEYG  366
            + + V G+ V V+GLTFKENC D+RNT++++I+EELK+Y ++V V D   D +EA++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITLTDSVKDGQYDGIVLAVGHKEFREMGVDKIRALGKENHVLYDLKYVIDKENSDI  422
            + L D+      D +++AV HK++ E   D I  L K+  +++D+K +I+ ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

178) GFO_2039 in NC_008571


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1448),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 227/422 (54%), Positives = 323/422 (77%), Gaps = 13/422 (3%)

Query  3    EKKIAVIGLGYVGLPLARLFATKYTVVGFDINKARVEELMNGHDSTMEVEDDLLQSALIK  62
            +++IAV+GLGYVGLP+A  F+ K  V+GFDIN +R+ EL N  D T EV ++        
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTEN--------  53

Query  63   KADLKNTKGLFCSYDLIDISDCNFYIITVPTPVDKNNRPDLTPLYKSSETVAKVLKKGDV  122
               LKNT+  + S +  D+   +F II+VPTP+DK+N+PDL PL K+SETV+KV+  + +
Sbjct  54   --KLKNTNIEYTS-NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTI  110

Query  123  VIYESTVYPGVTEDECVPVLEKHSGLEFNQDFFVGYSPERINPGDKEHTVEKILKVTAGS  182
            V+YESTVYPG TE+ECVPVLEK SGL   +DFFVGYSPERINPGDK HT E I KV +G 
Sbjct  111  VVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQ  170

Query  183  TPEIGKEVNDLYAEVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNMMGID  242
            T E+   V D+Y+ V+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ ++ID
Sbjct  171  TLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDID  230

Query  243  TQDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLAQKAQEIGYHPEIILAGRRMNDSMGQ  302
            T++VL A+GTKWNFL F+PGLVGGHCIGVDPYYL++KAQE+G HPE+ILAGRR+ND+M++
Sbjct  231  TNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAK  290

Query  303  YVASELVKLMLQNDIKVKNSKILVLGITFKENCPDVRNTKVVDVIKSLKEYGVDITIYDP  362
            Y+AS+++K +L++++ V+ + + VLG+TFKENCPD+RNTKV+++I  LKEYG+++T+ D 
Sbjct  291  YIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDV  350

Query  363  LANPAEVMHEYGLETTKNQPDSKFDAILLTVAHKEFISL--NFDDLKQLVSVVYDVKGVL  420
             A+  E    +GL+    +     D +L++V+HK+++    ++ +L +  ++V+D+KG++
Sbjct  351  EADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGII  410

Query  421  GD  422
              
Sbjct  411  NS  412

179) Tgr7_2112 in NC_011901


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1448),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 229/426 (54%), Positives = 325/426 (77%), Gaps = 2/426 (0%)

Query  1    MSERIGVIGLGYVGLPVALGFAKHYPDTVGFDISERRVRTLRDGQDYTGEVTAEELKANP  60
            M+  I+V+GLGYVGLPVA+ F++     +GFDI+E R++ L++  D T EVT + LK   
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  61   IRYTTDPADLKGvtffvvtvptpIDDNRQPDLSPVISACETVGKVLSPGAVVVFESTVYP  120
            I YT+++ DLK   F++++VPTPID + +PDL P++ A ETVGKV++P+++VV+ESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GVTEEICGPILARVSGLEQGKDFKLGYSPERINPGDKEHTLERIVKVVSGEDAETLERVA  180
            G TEE C P+L + SGL  GKDF +GYSPERINPGDK HT+E I KVVSG+  E LE VA
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  EAYGRIVTAGIHRAPTIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIRTKDVLAAAG  240
            + Y+ +VTAG+H+A++IKVAEAAKVIENTQRD+NIALMNELA+IFD+L+I T++VL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFTPGLVGGHCIGVDPYYLTTKAKAVGYYPQVILAGRRINDGMGAYIAQRLVKI  300
            TKWNFL F PGLVGGHCIGVDPYYLT KA+ VG  P+VILAGRRIND M+ YIA  ++K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  LIEQDRPVKQGRVGILGLTFKENVPDLRNSRVPDIVKELRQFGIEPLIHDPLADADEARH  360
            L+ Q+  V+ + V +LGLTFKEN PDLRN++V +I+ EL+++G++  ++D  AD +EA+ 
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  361  EYDLELASLDAFRDLDGLIYAVPHKAYQQQGAAGLRAMMVEGGVFVDVKSAMHPEDINGK  420
             ++L+L     ++ +D +++AVPHK Y ++   +   ++ + G+  D+K+ ++++++N  
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMEN-KKDYINLVKDCGIVFDIKGIINSDELNVS  418

Query  421  YVYWSL  426
               W L
Sbjct  419  QRLWRL  424

180) Solca_4331 in NC_017770


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1446),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 229/412 (56%), Positives = 322/412 (79%), Gaps = 4/412 (0%)

Query  10   KIAIVGLGYVGLPLAVEFGKKFTTVGFDIDQLRIDELSKGFDKTLETQYVDINSIEKLSF  69
            +IA+VGLGYVGLP+AV FG+K   +GFDI++ RI EL + +D+T E     +++ + + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  70   TSNLNDLKDCTVYIVTVPTPVDEFKNPDLRPLLKASEMLGTLIKKGDIVIYESTVYPGCT  129
            TSN +DLK     I++VPTP+D  ++PDL PLLKASE +G +I  + IV+YESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  130  EEDCVPVLEKYSGLTFNKDFFCGYSPERINPGDKTNTLKSIRKVVSGSTPEIAKIIKDLY  189
            EE+CVPVLEKYSGL   KDFF GYSPERINPGDK +T+ +I KVVSG T E+  I+ D+Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  190  DSIIEAGTFLAPSLKVAEASKAIENAQRDVNISFVNELALIFDRMGIDTNDVLEAAGTKW  249
             S++ AG   A+S+KVAEA+K IEN+QRDVNI+++NELA+IFD+++IDTN+VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  250  NFLKFRPGLVGGHCIGVDPYYLTHKAQSLGYYPQVILSGRRINDNMGMFIANKVVKLLIQ  309
            NFL+F+PGLVGGHCIGVDPYYLTHKAQ +G  P+VIL+GRRINDNM+ +IA++V+K L++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  310  KKHRVDGAKALILGVTFKENCPDVRNSRVIDIYEELTQFGLLVDIYDPWADKSIVKKEYG  369
            +   V+GA   +LG+TFKENCPD+RN++VI+I EEL ++GL V + D  ADK+  KK +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  370  IDLSQNLYSKVYDAIILAVAHNEFLEI--DFSRITANGSTVIFDTKGILDRN  419
            +DL +    K+ D +++AV+H++++E   D+  +  ++  ++FD KGI++ +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLV-KDCGIVFDIKGIINSD  413

181) tll1201 in NC_004113


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  385 bits (1447),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 232/416 (56%), Positives = 319/416 (77%), Gaps = 8/416 (1%)

Query  10   SIAVIGLGYVGLPLAVEFGKKYPTLGYDLNSLRVSQLIEGYDHTGEISSEELKGASYLTY  69
            +IAV+GLGYVGLP+AV FG+K   +G+D+N  R+ +L + YD+T E++ + LK ++ + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  70   TTNIQDLKKCSFFVVAVPTPVDDHKVPDLGSLKTASQHLGNVLPRNSIVVYESTVYPGVT  129
            T+N +DLKK  F+++AVPTP+D H+ PDL +L  AS+ +G+V+  ++IVVYESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  130  EEICVPILEQASGLVFNQDFFVGYSPERVNPGDKEHRLTTIVKVTSGSTPEVAEIVDRVY  189
            EE CVP+LE+ SGLV  +DFFVGYSPER+NPGDK H + TI KV SG T EV EIV  VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  190  ASIVPAGTHRCSSIRVAEAAKVIENIQRDVNIALVNELSILFNRLGIDTQEVLTAAGTKW  249
            +S+V AG H+ SSI+VAEAAKVIEN QRDVNIAL+NEL+I+F++L+IDT+EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  250  NFLPFRPGLVGGHCIGVDPYYLTYQASAYGYHPELILAGRRINDYMGTYVAQQFIKLLIQ  309
            NFL F+PGLVGGHCIGVDPYYLT +A   G HPE+ILAGRRIND M+ Y+A + IK L++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  310  KGIYPQQARVLVMGLTFKENCPDLRNTRVVDIISELQDYGIQVDVYDPWADPDLAKKEYG  369
            +G+  Q A V V+GLTFKENCPDLRNT+V++II EL++YG++V V D  AD + AKK +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  370  ISLIEELYPEYWDGAVIAVAHRQFFELGA---AGIRRCLKTPSALYDVKWVLSKED  422
            + LI+       D  ++AV+H+++ E        ++ C    + ++D+K +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDC----GIVFDIKGIINSDE  414

182) wbpO in NC_020516


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  384 bits (1444),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 234/410 (58%), Positives = 317/410 (78%), Gaps = 3/410 (0%)

Query  8    KLAVIGLGYVGLPLAVEFGKIRPVIGFDINPARVAELQAGQDHTLECSPEELATARQLRF  67
            ++AV+GLGYVGLP+AV FG+ + VIGFDIN +R+ EL+   D+T E + + L  + ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  68   SADAADLKQAQIFIVTVPTPVDQANRPDMTPLVKASTTVGRALKKGAIVIYESTVYPGAT  127
            +++A DLK+A+++I++VPTP+D+ N+PD+ PL+KAS TVG+ +  ++IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEVCVPVLERESGLVFNIDFFCGYSPERINPGDKEHRLPTIKKVTSGSTPAVADTVDALY  187
            EE CVPVLE+ SGLV   DFF GYSPERINPGDK H + TI KV SG T  V + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  AQIITAGTHKASSIKVAEAAKVIENTQRDLNIALMNELSLIFKKLGIDTLEVLQAAGTKW  247
            + ++TAG HKASSIKVAEAAKVIENTQRD+NIALMNEL++IF KL+IDT EVL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYHPEVILAGRRINDGMAAHVADETVKLMLR  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQEVG HPEVILAGRRIND MA  +A + +K +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KGIPVLESRILVLGLTFKENCPDVRNTKVVDIVRTLQGYNTVVDVYDPWIDRDEARHEYG  367
            +G+ V  + + VLGLTFKENCPD+RNTKV++I+  L+ Y   V V D   D++EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IDCLAHAPRPGHYAAIVLAVPHQQFVELGEAGIKGFGMPGAAVFDVKSIL  417
            +D L ++        +++AVPH++++E    +   +    + VFD+K+I+
Sbjct  363  LD-LIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGII  410

183) HY04AAS1_0638 in NC_011126


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  384 bits (1445),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 244/424 (58%), Positives = 331/424 (79%), Gaps = 3/424 (0%)

Query  13   SICVVGLGYVGLPLAVTFAKHFNVIGFDINQIRINELKLGIDRTKETTSEELLNSNILFT  72
            +I VVGLGYVGLP+AVTF++  +VIGFDIN+ RI+ELK   DRT+E T + L N+NI +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   DNEEYIKKCKFIIITVPTPIDKHKVPDLKPIFSASVIVGRNLQKDSIVVYESTVYPGLTE  132
             N E +KK  FIII+VPTPIDKH+ PDL P++ AS  VG+ +  D+IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EECVPILEKESGLKWKKDFFVGYSPERINPGDKIHRFENIVKVVSGDSEYSLNIISGIYS  192
            EECVP+LEK SGL   KDFFVGYSPERINPGDK+H FE I KVVSG++   L+I++++YS
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  KVVKAGIFKAKSIKVAEAAKVIENTQRDINIALMNELSMIFHKMGIDTKDVLEAAATKWN  252
             VV AG+ KA SIKVAEAAKVIENTQRD+NIALMNEL++IF+K++IDT++VL A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLKFEPGLVGGHCISVDPYYLTFKAQELGHHPEVILSGRRVNDDMPNFVVQNVLKLLIKA  312
            FL+F PGLVGGHCI+VDPYYLT KAQE+GHHPEVIL+GRR+ND+M++++  NV+K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  KKQIESSKIIIFGLSFKENIPDIRNSKVVDIYNELKDFGINTYIYDPYVYRDEVFKEYGI  372
              +++++ + ++GL+FKEN PD+RN+KV++I +ELK++G+N  + D    ++E  K +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELLQDPYEEAPYDAVIVAVKHNAFGEYDIRFYENITKSPKILIDIKNLYNKDVFLKNGFL  432
            +L++   E    D V+ AV H+ + E + + Y N+ K   I++DIK + N D  L+ +  
Sbjct  364  DLIDTK-ELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE-LNVSQR  420

Query  433  YWSL  436
             W L
Sbjct  421  LWRL  424

184) Alide_0758 in NC_014910


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  384 bits (1445),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 228/410 (56%), Positives = 315/410 (77%), Gaps = 3/410 (0%)

Query  7    TIAIIGLGYVGLPLAVEFGKHRNVLGFDINPARVAELQAGRDHTLECSGEQLREACHLRY  66
             IA++GLGYVGLP+AV FG+ ++V+GFDIN +R+ EL+   D+T E + ++L+++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   SHQPEDLKACQVFIVTVPTPVDQANRPDLTPLVKASQIVGAALKSGDVVIYESTVFPGAT  126
            + ++EDLK  + +I++VPTP+D+ N+PDL PL+KAS+ VG  + ++ +V+YESTV+PGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCVPELERMSGLKFNQDFFCGYSPERINPGDKDHRLPSIKKVTSGSTPEVAGAVDALY  186
            EE CVP LE+ SGL   +DFF GYSPERINPGDK H + +I KV SG T EV   V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  AQIITAGTHKASSIKVAEAAKVIENTQRDINIALMNELSLIFARLGIDTLEVLQAAGTKW  246
            + ++TAG HKASSIKVAEAAKVIENTQRD+NIALMNEL++IF +L+IDT EVL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYHPDVILAGRRVNDNMARHVADTTVKLMLR  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQEVG HP+VILAGRR+NDNMA+ +A   +K +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KGIPVLGSRVLVLGLTFKENCPDLRNTKVVDMVHTLQGYNAQVDVYDPWIDTKEALHEYG  366
            +G+ V G+ V VLGLTFKENCPDLRNTKV+++++ L+ Y  +V V D   D +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LKCLSAMPAPGEYAAIILAVGHRQFVELGEAGIKALGQANAVLFDVKSIL  416
            L  L           +++AV H++++E    +   L +  +++FD+K+I+
Sbjct  363  LD-LIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGII  410

185) wbpO in NC_021033


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  384 bits (1443),  Expect = 5e-108, Method: Compositional matrix adjust.
 Identities = 228/416 (55%), Positives = 324/416 (78%), Gaps = 2/416 (0%)

Query  7    KLAVVGLGYVGLPLAVEFGKKREVLGFDINQKRIDQLEAGEDITLEVENDELAEAKHLKF  66
            ++AVVGLGYVGLP+AV FG+K+ V+GFDIN+ RI +L    D T EV ++ L ++ ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   SSNPESLKNYNTFIVTVPTPIDDHKIPDFTPLIKASETIGGALKKGDIVIYESTVYPGAT  126
            +SN+E LK+ + +I++VPTPID H+ PD+ PL+KASET+G  +  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKYNEDFYAGYSPERINPGDKQHRVYNIKKVTSGSTPEIADLVDELY  186
            EE C+PVLEK SGL    DF+ GYSPERINPGDK H    I KV SG T E+ ++V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  KSIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALLCNRLGIDTEDVLEAAGTKW  246
             S++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA++ ++L+IDT++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGRYVVEQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M++Y+  +++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KNVKVVGSHVLVMGLTFKENCTDIRNTRIVDIVEELKDYNIDVDVYDPWVDPEEAQQEYG  366
            + + V G+ V V+GLTFKENC D+RNT++++I+EELK+Y ++V V D   D +EA++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITLTDSVKDGQYDGIVLAVGHKEFREMGVDKIRALGKENHVLYDLKYVLDKENSDI  422
            + L D+      D +++AV HK++ E   D I  L K+  +++D+K +++ ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

186) S58_25320 in NC_020453


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  384 bits (1442),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 228/420 (55%), Positives = 307/420 (74%), Gaps = 5/420 (1%)

Query  1    MIGLGYVGLPVAAAFARTGCPAIGFDIDAARVAELKDARDRTCEVDAADLRRPGLRFTSE  60
            ++GLGYVGLPVA +F+      IGFDI+ +R+ ELK+  DRT EV    L+   + +TS+
Sbjct  7    VVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSN  65

Query  61   PDDIATADFFIVTVPTPIDSARRPDLGAMLAATRTVGAVLKRGDIVVYESTVYPGAVEED  120
            ++D+  ADF+I++VPTPID   +PDL ++L A+ TVG V+  + IVVYESTVYPGA EE+
Sbjct  66   AEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEE  125

Query  121  CVPLLESSSGLKAGADFNVGYSPERINPGDKTHRFETITKVVSAQNPQTLAIVAAVYGSV  180
            CVP+LE  SGL  G DF VGYSPERINPGDK H FETITKVVS+Q  + L IVA VY+SV
Sbjct  126  CVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSV  185

Query  181  VTAGIHRAPSIKVAEAAKVIENTQRDLNIAFMNELSLIFQALEIDTGDVLAAAATKWNFL  240
            VTAG+H+A+SIKVAEAAKVIENTQRD+NIA+MNEL++IF+ L+IDT +VL A++TKWNFL
Sbjct  186  VTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFL  245

Query  241  PFTPGLVGGHCIGVDPYYLTYRAEKAGYHPEVILAGRRINDEMGRRIARECIrg--llrr  298
             F PGLVGGHCIGVDPYYLT +A+  G HPEVILAGRRIND+M++ IA + I+       
Sbjct  246  NFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGL  305

Query  299  kgrgglVTILGMTFKENVPDIRNSRVIDIIGELQSFGVEVQIADPLADAAAVHEEYGIGL  358
              +G+ V +LG+TFKEN PD+RN++VI+II EL+ +G++V + D  AD       +G++L
Sbjct  306  EVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDL  365

Query  359  TAIEALRPADAVVLAVSHDQYLAGGWPLVQGLLREESGLVLDVKMKLDRASKPTAIELWR  418
                 L+  D V++AV+H +Y+      ++  L  + G+V+D+K  ++      +  LWR
Sbjct  366  IDTKELKMVDVVLFAVPHKDYMENKKDYIN--LVKDCGIVFDIKGIINSDELNVSQRLWR  423

187) TVNIR_1836 in NC_019902


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  384 bits (1442),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 229/436 (53%), Positives = 324/436 (75%), Gaps = 22/436 (5%)

Query  6    TLAVIGLGYVGLPLAVEFGRRRRVIGFDKSAERIAELRAGRDSTLEVEAADLAQATGLEF  65
             +AV+GLGYVGLP+AV FG +++VIGFD +  RI EL+   D T EV    L + T +E+
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  66   TTDPRQLREATIYIVTVPTPIDAGRQPDLAPLMHASETIGRVLKPGDTVIYESTVYPGAT  125
            T+++ +L+ A + I++VPTPID   +PDL PL+ ASET+G+V+ P+  V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  126  EEVCVPILERSSGLRYISTERRGTDPELPPGQTVAADNGFYCGYSPERINPGDREHRVTT  185
            EE CVP+LE+ SGL                      +++F+ GYSPERINPGD+ H   T
Sbjct  123  EEECVPVLEKYSGL--------------------VCGKDFFVGYSPERINPGDKVHTFET  162

Query  186  IRKVTSGSTPEVAERVDALYREIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELAL  245
            I KV SG T EV E V  +Y  ++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+
Sbjct  163  ITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAI  222

Query  246  IFNRLGIDTEEVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQQIGYHPEMILAGR  305
            IF++L+IDT+EVL+A+GTKWNFL F+PGLVGGHCIGVDPYYLTHKAQ++G HPE+ILAGR
Sbjct  223  IFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGR  282

Query  306  RINDGMGAYVAGQLVKAMLKKRIQVEGSRVLVMGLTFKENCPDLRNTRVVDILHELAEYD  365
            RIND M+ Y+A++++K +LK+ ++V+G+ V V+GLTFKENCPDLRNT+V++I++EL EY+
Sbjct  283  RINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYG  342

Query  366  VQVDVCDPWASVECARREYGIELIRGPEPGQYDAIVLAVAHRQFNAMGVSGIRALGRPRH  425
            ++V V D  A  + A++ +G++LI   E    D +++AV+H+++      +   L +   
Sbjct  343  LNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCG  401

Query  426  VLYDLKYVFPANETDL  441
            +++D+K ++ ++E ++
Sbjct  402  IVFDIKGIINSDELNV  417

188) SpiBuddy_0263 in NC_015152


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  383 bits (1439),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 235/424 (56%), Positives = 329/424 (78%), Gaps = 4/424 (0%)

Query  8    ISIIGLGYVGMPIAVAFAKKVKVIGFDINIAKVELYKAGIDPTREVGNEIIKNTSVEFTS  67
            I+++GLGYVG+P+AV+F++K KVIGFDIN +++   K   D T EV ++ +KNT++E+TS
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTS  64

Query  68   DETKLREARFHIVAVPTPVYDDHTPDLSPVEGASRVLGKNLEKGSIVVFESTVYPGVTED  127
            +   L+ A F I+AVPTP+  ++ PDL P+  AS  +GK +  ++IVV+ESTVYPG TE+
Sbjct  65   NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEE  124

Query  128  ICVPILEKESGLKCGVDFFVGYSPERINPGDKVHRLETIIKIVSGMDAQTLDTVAMVYEL  187
             CVP+LEK SGL CG DFFVGYSPERINPGDKVH +ETI K+VSG   + L+ VA VY  
Sbjct  125  ECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSS  184

Query  188  VVEAGVYRAPSIKVAEAAKVIENSQRDINIAFMNELSIIFNKLGISTKEVLDAASTKWNF  247
            VV AGV +A+SIKVAEAAKVIEN+QRD+NIA+MNEL+IIF+KL+I T+EVL A++TKWNF
Sbjct  185  VVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNF  244

Query  248  LKFSPGLVGGHCIGVDPYYLTYKAEQLGYHSQIILSGRRINDDMGRYVAENVVKKLISVG  307
            L+F PGLVGGHCIGVDPYYLT KA+++G H+++IL+GRRIND+M++Y+A NV+K L+  G
Sbjct  245  LNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQG  304

Query  308  SPVKGAKVLVLGFTFKENCPDTRNTKVIDIINELREYGIEPMVCDPVADSQEAEYLYGIS  367
              V+GA V VLG+TFKENCPD RNTKVI+II+EL+EYG++  V D  AD +EA  ++G+ 
Sbjct  305  LEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLD  364

Query  368  FVSRQSikkvnavivavaHNEFLTYGIRELDSFFACDTEKVVIDVKSILNRNEFEQAGYC  427
            ++  + +K V+ V+ AV+H++++      ++    C+   +V+D+K+I+N +E++ +   
Sbjct  365  LIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCG---IVFDIKGIINSDELNVSQ-R  420

Query  428  YWSL  431
             W L
Sbjct  421  LWRL  424

189) vipA in NC_015844


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  383 bits (1439),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 237/427 (56%), Positives = 325/427 (77%), Gaps = 14/427 (3%)

Query  5    KIAIIGLGYVGLPLARLFATKYPVIGFDINEERIKELQSGTDSTLEVEDDILQQVLRDTP  64
            +IA++GLGYVGLP+A  F+ K  VIGFDINE RIKEL++  D T EV ++ L+       
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-------  56

Query  65   QMETGLHCTNQMEAISDCNYYIVTVPTPVDHTNRPVLTPLYKSSETVGKVLKKGDTVVYE  124
              +T ++ T++ E +   ++ I++VPTP+D  N+P L PL K+SETVGKV+  +  VVYE
Sbjct  57   --NTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  125  STVYPGVTEEECIPVLEKVSGLVFNKDFFVGYSPERINPGDKEHTVEKILKVTSGSTPET  184
            STVYPG TEEEC+PVLEK SGLV  KDFFVGYSPERINPGDK HT E I KV SG T E 
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  185  GKKVNALYASVITAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNLMDIDTSAV  244
               V  +Y+SV+TAG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF+ +DIDT+ V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  245  LEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEFGYHPEIILAGRRMNDGMGKYVAS  304
            L A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND M+KY+AS
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  305  EVIKLMVQREIKIKGAKMLVLGITFKENCPDVRNTKAVDVITNLKSYGANISIFDPWASK  364
            +VIK ++++ + ++GA + VLG+TFKENCPD+RNTK +++I +LK YG N+++ D  A K
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  365  eeveeeYGLEIVNQVPNEKYDTIVLAVAHNEFLNI--DLRALLNENGVLYDVKGILKG--  420
            +E    +GL++++       D +++AV+H+++++   D   L+++ G+++D+KGI+++  
Sbjct  355  NEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414

Query  421  -KVDGRL  426
             +V  RL
Sbjct  415  LNVSQRL  421

190) C380_07390 in NC_018708


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  383 bits (1440),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 221/420 (53%), Positives = 313/420 (75%), Gaps = 7/420 (1%)

Query  8    KPRIAIIGLGYVGLPLAVEFGKHFPVVGFDIHQPRILELQSGYDRTQETSAQQIQAATQL  67
            +  IA++GLGYVGLP+AV FG+   V+GFDI+++RI EL++ YDRT+E + ++++  T++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNI  60

Query  68   QYSSNPKDLEDCNIYIVTVPTPVDDAKRPDLSTLIKASQTIGHAMRPGALVIYESTVYPG  127
            +Y+SN+ DL   ++ I++VPTP+D  ++PDL  L+KAS+T+G  + P+++V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  128  VTEDVCVPVLEGSSGLRFNHDFFCGYSPERVNPGDKINTLTRIRKITSGSTPEAAEAVDQ  187
             TE+ CVPVLE  SGL    DFF GYSPER+NPGDK++T+  I K+ SG T E  E V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  188  LYRRIITAGTYQARSIRVAEAAKVIENTQRDLNIALMNELSILFNRLDIDTLEVLEAAGS  247
            +Y  ++TAG  +A SI+VAEAAKVIENTQRD+NIALMNEL+I+F++LDIDT EVL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  248  KWNFVPFRPGLVGGHCIGVDPYYLTHKAEQVGYHPQIILAGRRINDNMAGYAARSTVKMM  307
            KWNF+ F+PGLVGGHCIGVDPYYLTHKA++VG HP++ILAGRRINDNMA Y A + +K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  308  LRAGMDAPRCKVGVLGITFKENCPDIRNSKVVDLVRELQIWGMDVVVADPVANPQEVQLE  367
            L+ G++     V VLG+TFKENCPD+RN+KV++++ EL+  G++V V D  A+ +E +  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  368  YNIALGTIDEHHPVDALIVAVGHTSYRALSAEQLRAYCRHVS--PVLADIKSLYDRDELA  425
            + + L    E   VD ++ AV H  Y     E+ + Y   V    ++ DIK++ + DEL 
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYM----ENKKDYINLVKDCGIVFDIKGIINSDELN  416

191) CHAB381_0666 in NC_009714


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  383 bits (1441),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 235/426 (56%), Positives = 331/426 (78%), Gaps = 11/426 (2%)

Query  6    DKIIAVVGLGYVGMPLLNAFSKKYKTIGYDINQKRVEELKSGVDRTLELNNSQLKEMDTF  65
            ++ IAVVGLGYVG+P+  +F++K K IG+DIN+ R+ ELK+  DRT E+ +++LK+ +  
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  66   YTTDINDLKCANIFIVTVPTPIDSKNKPDLTPLIKSSESIGKALNKGDIVIYESTVYPGV  125
            YT++ +DLK A+++I++VPTPID  NKPDL PL+K+SE++GK +  + IV+YESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  126  TEEICVPCLEKTSGLKFNIDFFCGYSPERINPGDKEHTVSKILKVTSGSTPEIADVVDAL  185
            TEE CVP LEK SGL    DFF GYSPERINPGDK HT   I KV SG T E+ ++V  +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  186  YKSIITAGTLKASSIKVAEASKVIENTQRDVNIALINELALIFDAMNIDTNEVIEAASTK  245
            Y S++TAG  KASSIKVAEA+KVIENTQRDVNIAL+NELA+IFD ++IDTNEV+ A++TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  246  WNFIKLKPGLVGGHCIGVDPYYLTYKAEELGYKPNLILNARHINNSMAGFIANKTIKTMI  305
            WNF+++KPGLVGGHCIGVDPYYLT KA+E+G  P++IL +R+IN++MA +IA++ IK ++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  306  DNDIKIKGSNVLVLGVTFKENCPDLRNTKVLNIVENLEEYGINVDIYDPWVDTNESNITF  365
             +++ ++G+ V VLG+TFKENCPDLRNTKV++I+E+L EYG+NV + D   D NE++  F
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  366  NHEIIANPFKNSKKYDAIIVAVAHNEFKNLKDSDYDKILNQ-HIIIDIKGIVN-------  417
              ++I    K+ K  D ++ AV+H+++ + K  DY +++++  I++DIKGI+N       
Sbjct  362  GLDLIDT--KELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNVS  418

Query  418  KPTWRL  423
            +  WRL
Sbjct  419  QRLWRL  424

192) Ajs_3014 in NC_008782


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  383 bits (1440),  Expect = 9e-108, Method: Compositional matrix adjust.
 Identities = 228/392 (59%), Positives = 312/392 (80%), Gaps = 1/392 (0%)

Query  5    NKTIAIVGLGYVGLPLAVEFGKHRPVLGFDINTARIAELQAGKDHTLECSPEELSNATHL  64
            N+ IA+VGLGYVGLP+AV FG+ + V+GFDIN +RI EL+   D+T E + + L N T++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNI  60

Query  65   RFSGQADDLKACQIFIVTVPTPVGQANRPDLTPLVKASETVGKALKAGDMVIYESTVYPG  124
             ++++A+DLK  +++I++VPTP+++ N+PDL PL+KASETVGK + ++ +V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  ATEEVCVPVLERVSGLRFNHDFFCGYSPERINPGDkintltkikkitSGSTPAVADAVDA  184
            ATEE CVPVLE+ SGL    DFF GYSPERINPGDK++T+  I K+ SG T  V + V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYNSIITAGTHKASSLKVAEAAKVIENTQRDLNIALVNELSVIFDRLGIDTLDVLEAAGS  244
            +Y+S++TAG HKASS+KVAEAAKVIENTQRD+NIAL+NEL++IFD+L+IDT +VL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLPFRPGMVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIKRM  304
            KWNFL F+PG+VGGHCIGVDPYYLTHKA+EVG HP+VILAGRRINDNMA+Y+A N IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  LKNGLDVPRCRIGVLGITFKENCPDIRNSKVADMVREFQAWGAQVVVTDPWADADEVARE  364
            LK+GL+V    + VLG+TFKENCPD+RN+KV +++ E++  G +V V D  AD +E  + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGLQLGQIDVANPVDSLVVAVGHNEYRQATPN  396
            +GL+L +    + VD ++ AV H++Y +   +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKD  392

193) Ssed_2973 in NC_009831


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  383 bits (1440),  Expect = 9e-108, Method: Compositional matrix adjust.
 Identities = 231/415 (56%), Positives = 324/415 (79%), Gaps = 2/415 (0%)

Query  4    QSKIAIIGLGYVGLPLAVEFGKHYPTMGFDINSSRVDELVSGVDNTLEVESEELLEAKHL  63
            + +IA++GLGYVGLP+AV FG+    +GFDIN SR+ EL +  D T EV +E+ L   ++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEV-TENKLKNTNI  60

Query  64   TYTCELQDIKDHNIYIVTVPTPIDENNAPDLTPLVKASEALGKVISQGDIVIYESTVYPG  123
             YT + +D+K  ++ I++VPTPID +N PDL PL+KASE++GKVI+ + IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  ATEEVCIPLIEKISGLKFNEDFFAGYSPERINPGDKINRLTTIMKITSGSTPEIAEFVDQ  183
            ATEE C+P++EK SGL    DFF GYSPERINPGDK++ + TI K+ SG T E+ E+V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  LYSSIITAGTHKASSIKVAEAAKVIENTQRDLNIAIINEFAKIFNRLDIDTEEVLKAAGT  243
            +YSS++TAG HKASSIKVAEAAKVIENTQRD+NIA++NE+A IF++LDIDT+EVLKA+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLHFKPGLVGGHCISVDPYYLTHKAKEVGYIPEVILAGRRINDGMGAYVSTQMVKKL  303
            KWNFL+FKPGLVGGHCI+VDPYYLTHKA+EVG  PEVILAGRRIND M+ Y++++++K L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  SSKKIHIDEAKVLVLGFTFKGDCPDVRNTKIIDVVNELKSFNISVDVYDGWADPAEVKHE  363
              + ++++ A V VLG+TFK +CPD+RNTK+I++++ELK + ++V V D  AD  E K  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YGLSLISELKPNEYDGIVLAVDHSEFKEMGIEKVRELGKENHVVYDVKYVFETTD  418
            +GL LI     +  D +++AV H ++ E   + + +L K+  +V+D+K ++++ +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

194) Lcho_3069 in NC_010524


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  382 bits (1438),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 244/424 (58%), Positives = 330/424 (78%), Gaps = 3/424 (0%)

Query  3    TIAVVGLGYVGLPLAVEFGKKHRTIGFDLSQAKIDAYKRHVDPTGEVSTELLQSSTGLEP  62
             IAVVGLGYVGLP+AV FG+KH+ IGFD+++++I   K + D T EV+ + L++ T +E 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  63   TTDASALREadfvvvavptpvddaHNPDFSPLVGASRSVGRNLKPGAIVVYESTVYPGAT  122
            T++A  L+ ADF+++AVPTP+D  ++PD+ PL+ AS +VG+ + P++IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  123  EEVCIPILEKESGLKWQKDFWVGYSPERINPGDKLHTLTTITKVVSGDCPETLAKVADVY  182
            EE C+P+LEK SGL   KDF VGYSPERINPGDK+HT+ TITKVVSG+  E L  VADVY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  183  GSIITAGVYKASSIKVAEAAKVIENTQRDLNIALVNELSLIFHRIGIDTTEVLQAAGTKW  242
            +S++TAGV KASSIKVAEAAKVIENTQRD+NIAL+NEL++IF++++IDT EVL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  243  NFLPFRPGLVGGHCIGVDPYYLTNKAERMGYHPQVILAGRRINDGMGKFIAEQTVKELIR  302
            NFL F+PGLVGGHCIGVDPYYLT+KA+ +G HP+VILAGRRIND M+K+IA + +KEL++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  303  LGAPVKGAHVIVQGLTFKENCPDLRNSKVIDVIRELETYGVTVHVHDPVADPAEAMHEYG  362
             G  V+GA V V GLTFKENCPDLRN+KVI++I EL  YG+ V V+D  AD  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  363  VELVEWAHLPRANAIVAAVAHDELAHRPIDALLTKLAPGGLYVDVKAQADRAALEARGIH  422
            ++L++  +L   + ++ AV+H +  +   D  +  +   G+  D+K+  +   L+    +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKD-YINLVKDCGIVFDIKGIINSDELNVSQ-R  420

Query  423  VWRL  426
            +WRL
Sbjct  421  LWRL  424

195) Pcryo_0613 in NC_007969


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  382 bits (1438),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 231/416 (56%), Positives = 321/416 (78%), Gaps = 2/416 (0%)

Query  8    KIAVIGLGYVGLPLAVEFGKHFSVIGFDINTKRVQELRDGFDGTLEVNSEELKSASSLKF  67
            +IAV+GLGYVGLP+AV FG+   VIGFDIN  R++EL++ +D T EV  + LK+ +++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  68   TTELGDIADYNFYIVTVPTPIDENNAPDLTPLESASAAVGKVIKAGDIVVYESTVYPGAT  127
            T++  D+   +F I++VPTPID +N PDL PL  AS +VGKVI ++ IVVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEVCIPIIEKVSGLTFNQDFYVGYSPERINPGDKVNTLTKITKITSGSTPEAADLIDSLY  187
            EE C+P++EK SGL   +DF+VGYSPERINPGDKV+T+  ITK+ SG T E  +++  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  ASIITAGTYRATSIKVAEAAKVIENTQRDLNIAIVNEFAKIFNIIGIDTQAVLDAAGSKW  247
            +S++TAG  +A+SIKVAEAAKVIENTQRD+NIA++NE+A IF+ ++IDT+ VL A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLKFKPGLVGGHCISVDPYYLTHKAQEVGYRPEVILAGRRINDGMGQYVATQMVKKLAR  307
            NFL+FKPGLVGGHCI+VDPYYLTHKAQEVG +PEVILAGRRIND M++Y+A++++K L +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  NKIHIDEAKVLVLGFTFKGDCPDTRNTKVIDIIKELKSFNINVDVYDDWADKQEVCEHYG  367
            + ++++ A V VLG+TFK +CPD RNTKVI+II ELK + +NV V D  ADK+E    +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IELINDLQKGYYDGVVVAVDHSKYKKMGVEAIRALAKSNHVVYDVKHVFQEGETDI  423
            ++LI+  +    D V+ AV H  Y     + I  L K   +V+D+K +++ +E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

196) AZKH_1073 in NC_020516


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  382 bits (1438),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 230/424 (55%), Positives = 319/424 (76%), Gaps = 3/424 (0%)

Query  6    TIGVIGLGYVGLPLAVEFGKKFRTVGFDLSAEKVAAYGQHFDPTGEVASEDLRAATQLSC  65
             I+V+GLGYVGLP+AV FG+K + +GFD++  ++    +++D T EV+ + L+  T++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  66   HTDASVIREADFIVVAVPTPVDDAHQPDFSPLVGASQTAGRNLKRGAIVVFESTVYPGAT  125
             ++A  ++ ADFI++AVPTP+D  ++PD+ PL+ AS+T G+ +  ++IVV+ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  126  EEICIPIIERESGLKWKKDFFVGYSPERINPGDKERTVTKIVKVVSGDTPETLAKVGEIY  185
            EE C+P++E+ SGL   KDFFVGYSPERINPGDK +T   I KVVSG+T E L  V+++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  186  GAIITAGVFPASSIKVAEAAKVIENTQRDLNIALMNELAVLFHKIGIDTLEVLEAAGTKW  245
            ++++TAGV  ASSIKVAEAAKVIENTQRD+NIALMNELA++F+K++IDT EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  246  NFLPFRPGLVGGHCIGVDPYYLTHKAEMLGHHPDVILAGRRINDGMGKYVAEQTVKQMIG  305
            NFL F+PGLVGGHCIGVDPYYLTHKA+ +GHHP+VILAGRRIND M+KY+A + +K+++ 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  306  AGHPIRGCDVVVLGLTFKENCPDLRNSKVIDVIRELESFGCRVHVHDPVANPDEATHEYG  365
             G  ++G  V VLGLTFKENCPDLRN+KVI++I EL  +G  V V+D  A+ +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  366  VQLTAWEDLPTaaaivaavSHKAYLEMPIEQICAKLQPGGVFADVKSAYDRDaiaaaggi  425
            ++L    +L     ++ AV+HK Y+E   + I    + G VF D+K+  + D     +  
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVF-DIKGIINSD-ELNVSQR  420

Query  426  aWRL  429
             WRL
Sbjct  421  LWRL  424

197) capL in NC_020134


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 231/426 (55%), Positives = 323/426 (76%), Gaps = 3/426 (0%)

Query  11   KKNLAVVGLGYVGMPLAIEFGKKINVIGFDTDKRKIENYLNGIDVTGEVGNEALKNTTVE  70
            ++N+AVVGLGYVG+P+A+ FG+K +VIGFD +  +I +  N  D T EV ++ LKNT +E
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  71   FSSDEGVLSRASFYIVTVPTPVAQDKTPDLNPLIGASTSVGRHLKKGDYVVYESTVYPGV  130
            ++S+   L +A F I++VPTP+ +++ PDL PL+ AS +VG+ +  +  VVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  131  TEEICIPVLERESGLKAGTDFKVGYSPERINPGDKVHTVTKVLKIVSGIDEEALEEIAKV  190
            TEE C+PVLE+ SGL  G DF VGYSPERINPGDKVHT   + K+VSG   E LE +A V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  191  YGIIVEAGIYRAESIKVAEAAKVIENTQRDINIAFMNELSIIFNKMNINTKAVLEAAGTK  250
            Y+ +V AG+ +A SIKVAEAAKVIENTQRD+NIA+MNEL+IIF+K++I+T+ VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  251  WNFLKFTPGLVGGHCIGVDPYYLAYKAQQLGYHPEVILAGRRINDMMGKYVAENTVKQLI  310
            WNFL+F PGLVGGHCIGVDPYYL+ KAQ++G HPEVILAGRRIND M+KY+A N +K+L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  311  KADKQIKGARVFIMGLTFKEDVPDTRNTKVVDIVHELQEYGIEVFVSDYMANSEDVLDEY  370
            K + +++GA V ++GLTFKE+ PD RNTKV++I++EL+EYG++V V+D  A+ ++    +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  371  GIKLAEYDDVNNVDAVIMAVCHKKYREITLDMLEKKYSKGTKVLIDVKGMFSPKEAAEKG  430
            G+ L +  +++ VD V+ AV HK Y E   D ++    K+  +++D+KG++++ E     
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN--LVKDCGIVFDIKGIINSDELNVSQ  419

Query  431  YLYWSL  436
             L W L
Sbjct  420  RL-WRL  424

198) Clst_0159 in NC_020887


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 231/426 (55%), Positives = 323/426 (76%), Gaps = 3/426 (0%)

Query  11   KKNLAVVGLGYVGMPLAIEFGKKINVIGFDTDKRKIENYLNGIDVTGEVGNEALKNTTVE  70
            ++N+AVVGLGYVG+P+A+ FG+K +VIGFD +  +I +  N  D T EV ++ LKNT +E
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  71   FSSDEGVLSRASFYIVTVPTPVAQDKTPDLNPLIGASTSVGRHLKKGDYVVYESTVYPGV  130
            ++S+   L +A F I++VPTP+ +++ PDL PL+ AS +VG+ +  +  VVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  131  TEEICIPVLERESGLKAGTDFKVGYSPERINPGDKVHTVTKVLKIVSGIDEEALEEIAKV  190
            TEE C+PVLE+ SGL  G DF VGYSPERINPGDKVHT   + K+VSG   E LE +A V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  191  YGIIVEAGIYRAESIKVAEAAKVIENTQRDINIAFMNELSIIFNKMNINTKAVLEAAGTK  250
            Y+ +V AG+ +A SIKVAEAAKVIENTQRD+NIA+MNEL+IIF+K++I+T+ VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  251  WNFLKFTPGLVGGHCIGVDPYYLAYKAQQLGYHPEVILAGRRINDMMGKYVAENTVKQLI  310
            WNFL+F PGLVGGHCIGVDPYYL+ KAQ++G HPEVILAGRRIND M+KY+A N +K+L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  311  KADKQIKGARVFIMGLTFKEDVPDTRNTKVVDIVHELQEYGIEVFVSDYMANSEDVLDEY  370
            K + +++GA V ++GLTFKE+ PD RNTKV++I++EL+EYG++V V+D  A+ ++    +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  371  GIKLAEYDDVNNVDAVIMAVCHKKYREITLDMLEKKYSKGTKVLIDVKGMFSPKEAAEKG  430
            G+ L +  +++ VD V+ AV HK Y E   D ++    K+  +++D+KG++++ E     
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN--LVKDCGIVFDIKGIINSDELNVSQ  419

Query  431  YLYWSL  436
             L W L
Sbjct  420  RL-WRL  424

199) Pnap_3130 in NC_008781


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  382 bits (1436),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 225/413 (55%), Positives = 316/413 (77%), Gaps = 3/413 (0%)

Query  10   VAVIGLGYVGLPLAVEFGKKYPVVGFDINARRVAELQTGEDHTLEVAPEALRQATQLVFA  69
            +AV+GLGYVGLP+AV FG+K  V+GFDIN  R+ EL+   D+T EV+ + L++ T++ ++
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYT  63

Query  70   TDIAALAECNVFIVTVPTPVDKANRPDLTPLIKASETVGKVLKQGDIVIYESTVYPGATE  129
            ++   L   + +I++VPTP+DK N+PDL PL+KASETVGKV+  + IV+YESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  130  EICVPVLEKFSGKKFNVDFFCGYSPERINPGDKVNTLTTIKKITSGSTPQTADTVDALYS  189
            E CVPVLEK+SG     DFF GYSPERINPGDKV+T+ TI K+ SG T +  + V  +YS
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  190  SIITAGTHRAKSLKVAEAAKVIENTQRDLNIALVNELSVIFERLGIDTLDVLEAAGSKWN  249
            S++TAG H+A S+KVAEAAKVIENTQRD+NIAL+NEL++IF++L+IDT +VL A+G+KWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  250  FLPFRPGLVGGHCIGIDPYYLTHKAEEVGYRPQVILAGRRINDNMARYVARSTIKLMLKN  309
            FL F+PGLVGGHCIG+DPYYLTHKA+EVG +P+VILAGRRINDNMA+Y+A + IK +LK+
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  310  GMDVPRCRIGVLGITFKENCPDIRNSKVVDMVREFEAWGACVVVADPWASAEEVMHEHGV  369
            G++V    + VLG+TFKENCPD+RN+KV++++ E+   G  V V D  A  +E     G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  370  QLGAVDAENRVDALVVAVGHNQYRQATLKELRTFCRGSKPVLADVKSLLDRQH  422
            +L      + VD ++ AV H++Y +   K+   + ++   V+ D+K++++ ++
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVF-DIKGIINSDE  414

200) TM1040_3606 in NC_008043


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  382 bits (1435),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 221/416 (54%), Positives = 320/416 (77%), Gaps = 2/416 (0%)

Query  10   QICVIGLGYVGLPLAVEFGRSRPVIGFDIDQSRIDELRLGDDRTREIDRDTLQSAQHLAL  69
            +I V+GLGYVGLP+AV FG  + VIGFDI++SRI EL+   DRT E+  + L+++ ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  70   TSDISEIAAASIYIVTVPTPIDATRRPDLRPLLSATRTVAQVLKPGDTVIYESTVYPGAT  129
            TS+  ++  A + I++VPTPID   +PDL PLL A+ TV++V+ P+  V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  130  EEDCVPLLEEISGLVFNADFGVGYSPERINPGDKTRRLPDIVKVTSGSSPETAAKVDRLY  189
            EE+CVP+LE  SGLV   DF VGYSPERINPGDK + +  I KV SG + E    V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  190  ASIVRAGTYPAPSIRVAEAAKVIENSQRDINIALINELAKIFNRMEIDTEAVLKAAGTKW  249
            +S+V AG   A+SI+VAEAAKVIEN+QRD+NIAL+NELA IF++++IDT+ VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  250  NFLNFRPGLVGGHCIGVDPYYLTHKAQEVGYHPEILLSGRRLNDGMGAYVAQQMIKAMLR  309
            NFLNF+PGLVGGHCIGVDPYYLTHKAQEVG HPE++L+GRR+ND M+ Y+A ++IK +L+
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  310  RRVQVVDSRILVMGLTFKENCPDLRNTRVVDVIEALRDFGVTVDVFDPHADPEEAYAEYG  369
            + ++V ++ + V+GLTFKENCPDLRNT+V+++IE L+++G+ V V D +AD +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  370  LRLIQHPETECYDGTILAVAHQEFKDMGAEVLRSFGKADALLYDLKYVLPAEDADL  425
            L LI+  E    D  ++AV+H+++ +   + + ++ K  ++++D+K ++ +++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

201) vipA in NC_009801


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  381 bits (1434),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 237/417 (57%), Positives = 328/417 (79%), Gaps = 4/417 (0%)

Query  7    KIGIIGLGYVGLPLAVEFGKKYNTVGFDIKQNRIDELKKQMDSTLECTADELASAKFLHY  66
            +I+++GLGYVGLP+AV FG+K + +GFDI+++RI ELK++ D T E T + L +++ ++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  67   SCEIEALKACNIFIVTVPTPIDKYKRPDLSPLVSASKMLSKVIKNGDIIIFESTVYPGAT  126
            + + E LK  +++I++VPTPIDK ++PDL PL+ AS  ++KVI  + I+++ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEICVPQIEAGSGLVFNKDFFIGYSPERINPGDKNHRVTNIMKVTSGSTPEAATFVDKIY  186
            EE CVP +E  SGLV  KDFF+GYSPERINPGDK H    I KV SG T E   +V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  SSIITAGTYKASSIKVAEAAKVIENTQRDlnialinelaiiFNKLGIDTEDVLKAAGTKW  246
            SS++TAG  KASSIKVAEAAKVIENTQRD+NIAL+NELAIIF+KL+IDT++VLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQEIGYHPEVILAGRRINDDMARYVASQLIKEMIK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQE+G HPEVILAGRRIND+MA+Y+AS++IKE++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  AGILIDNANILIMGLSFKENCPDIRNTKIIDIISELKDYNLNVDVYDPWVSEDEALQEYG  366
             G+ ++ A + ++GL+FKENCPD+RNTK+I+II ELK+Y LNV V D     +EA + +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  IEIHSTKPSKKYEGIIFAVAHEQFKNMQSIEIKELQSTKC-VTYDLKYILNKSDATI  422
            +++  TK  K  + ++FAV+H ++ + +   I+ ++   C + +D+K I+N  +  +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKD--CGIVFDIKGIINSDELNV  417

202) Mesau_02813 in NC_019973


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  381 bits (1433),  Expect = 3e-107, Method: Compositional matrix adjust.
 Identities = 221/426 (52%), Positives = 323/426 (76%), Gaps = 2/426 (0%)

Query  1    MSERIAVIGLGYVGLPVAVAFGKVFPGTIAFDISERRIEELLRGVDRTGEVDTAALRESS  60
            M+  IAV+GLGYVGLPVAV+FG+     I+FDI+E RI EL    DRT EV    L++++
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  61   IVLTTDREMLKGATFFIVAVPTPIDINRAPDLAPLKLASQFVGETVSKGAVVVFESTVYP  120
            I  T++ E LK A F+I+AVPTPID +  PDL PL  AS+ VG  ++ +++VV+ESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GVTEDFCGPIIEHMSGLRHPHDFALGYSPERANPGDQEHSLRRVIKVVSGENAETLERVA  180
            G TE+ C P++E  SGL    DF +GYSPER NPGD+ H++  + KVVSG+  E LE VA
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  RVYGQIIDAGVYRAGSIKVAEAAKVIENTQRDLNIALMNELAMIFERLDIRTQDVLDAAS  240
             VY+ ++ AGV +A+SIKVAEAAKVIENTQRD+NIALMNELA+IF++LDI T++VL A++
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFKPGFVGGHCISVDPYYLTAKAEAEGYHPQIILAGRRINDGMGAFVAQQIVKQ  300
            TKWNFL FKPG+VGGHCI+VDPYYLT KA+  G HP++ILAGRRIND M+ ++A +++K+
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  LIRSDIPVKGASVGILGLTFKEDVPDLRNSRVFDMVKELRQFGIVPKVHDPLADTESALR  360
            L++ ++ V+GA+V +LGLTFKE+ PDLRN++V++++ EL+++G+   V+D  AD + A +
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  361  DHGETILPINEIGDLQALVLAVPHKVYLTSERTRLFQMIKQGGTLFDIKSALKPNEIPDS  420
              G  ++  +E+  ++ +++AVPHK Y+ + +   ++++K+ G +FDIK+ ++++E+  S
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKD-YINLVKDCGIVFDIKGIINSDELNVS  418

Query  421  LKYWSL  426
             + W L
Sbjct  419  QRLWRL  424

203) Deide_20300 in NC_012526


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  381 bits (1432),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 229/423 (55%), Positives = 327/423 (78%), Gaps = 4/423 (0%)

Query  5    KIAVLGLGYVGLPLAVALAEKFGDVLGFDINAARVAELGQGHDRTGEIDDGRLRSSRLRC  64
            +IAV+GLGYVGLP+AV++++K   V+GFDIN +R+ EL +  DRT E+ + +L+++ +  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  65   SNEAGHLADRTLFIVTVPTPIDAHNTPDLTPLIRASEMIGQYLKTGDVVVYESTVYPGVT  124
            +++A +L    ++I++VPTPID HN PDL PL++ASE +G+ +  + +VVYESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  125  EEVCGPVLARVSGLRQYEDFKLGYSPERINPGDKVHTLEKITKVVSGQDSETMNRvaavy  184
            EE C PVL + SGL    DF +GYSPERINPGDKVHT+E ITKVVSGQ  E ++ VA VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  185  eavveaGIHRAPSIRVAEAAKVIENTQRDLNIALMNELALIFDRLGIRTLDVLEAAGTKW  244
             +VV AG+H+A+SI+VAEAAKVIENTQRD+NIALMNELA+IFD+L+I T +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  245  NFLPFRPGLVGGHCIGVDPYYLTQKAQEVGYYPQVILAGRRVNDGMGAFVAQKLVKLLIA  304
            NFL F+PGLVGGHCIGVDPYYLT+KAQEVG  P+VILAGRR+ND M+ ++A +++K L+ 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  305  ADRPVKGARVGVLGLTFKENVPDLRNSRVPDIIAELRQFGIEPLIHDPHAEQAEAMHEYN  364
             +  V+GA V VLGLTFKEN PDLRN++V +II EL+++G++  ++D +A++ EA   + 
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  365  LSLSDLEAFQELDGLILAVPHQAYLNMSRSRLTGMVNGTGLLVDVKSALSESDL--PGRY  422
            L L D   ++ +D +++AVPH+ Y++ ++     +V++ G++ D+K+ ++  +L  + R 
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

Query  423  WSL  425
            W L
Sbjct  422  WRL  424

204) capL in NC_020409


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  381 bits (1432),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 232/427 (55%), Positives = 323/427 (76%), Gaps = 7/427 (1%)

Query  15   AIAVVGLGYVGLPLAVALGRHFKVVGVDVSQKRVDELNSRIDRTGEVDFETVGEDVDLVF  74
             IAVVGLGYVGLP+AV++G   KV+G D+++ R+ EL++  DRT EV  E    + ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVT-ENKLKNTNIEY  62

Query  75   SADLADLEKTRFVIVAVPTPIDEYHSPDLRPVLGASGSVGKHLQPGSVVVYESTVFPGLT  134
            +++  DL K+ F+I+AVPTPID  + PDL P+L AS +VGK + P+++VVYESTV+PG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  135  EEMCVPILEKESGLKNGEEFWVGYSPERINPGDKVHRLETIVKVVSGQDQASGKLLEDVY  194
            EE CVP+LEK SGL  G +F VGYSPERINPGDKVH +ETI KVVSGQ      ++ DVY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  195  GTIIEAGTHLAADIRTAEAAKVIENTQRDLNIALMNELAIIFDRMGIDTLDVLEASGTKW  254
            ++++ AG H A+ I+ AEAAKVIENTQRD+NIALMNELAIIFD+++IDT +VL ASGTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  255  NFLPFRPGLVGGHCIGVDPYYLTFKAEAEGFHPHVILAGREINDGMGKFIAESTVKLMIK  314
            NFL F+PGLVGGHCIGVDPYYLT KA+  G HP+VILAGR IND M+K+IA + +K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  315  NDCKIKGARVGVLGVTFKENVPDLRNTRVVDILEELDDYGADTLVHDAMADHEEAREELG  374
            ++  ++GA V VLG+TFKEN PDLRNT+V++I+EEL +YG +  V+D  AD +EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  375  IDLCSLEEMRDLDALILAVPHDEYKSISVAALKQWFS-TPETALIIDVKCFFDRAELETE  433
            +DL    E++ +D +++AVPH +Y    +   K+ ++   + ++++D+K +++  EL+  
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY----MENKKDYINLVKDCGIVFDIKGIINSDELNVS  418

Query  434  NVAYWRL  440
            +   WRL
Sbjct  419  Q-RLWRL  424

205) TepiRe1_1907 in NC_019954


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  381 bits (1432),  Expect = 5e-107, Method: Compositional matrix adjust.
 Identities = 222/387 (58%), Positives = 307/387 (80%), Gaps = 0/387 (0%)

Query  13   KISVTGLGYVGLPLAISFAKVADVVGFDISKEKVSQYLNGIDITKEVGDETIKQTTALLT  72
            +I+V GLGYVGLP+A++F++   V+GFDI+  ++ +  N  D T+EV ++ +K+T    T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   WEEKYLKDCKFHIVAVPTPINADKTPDLKPVINASKTLGRNLTNGSIVVYESTVYPGVTE  132
             +   LK   F I+AVPTPI+ ++ PDL P+++AS T+G+ +T ++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DICVPILEQESGLKGGVDFKVGYSPERINPGDKVHRLESIVKVVSGIDEESLETIAKVYE  192
            + CVP+LE+ SGL  G DF VGYSPERINPGDKVH +E+I KVVSG   E LE +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVKAGVYRAKSIKVAEAAKVIENSQRDINIAFMNELSIIFNKMGIDTKAVLEAAGTKWN  252
             VV AGV +A SIKVAEAAKVIEN+QRD+NIA+MNEL+IIF+K++IDT+ VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFNPGLVGGHCIGVDPYYLTYKAEQIGYHSQIILAGRKINDDMGKYVAENAVKSMIKA  312
            FLNF+PGLVGGHCIGVDPYYLT KA+++G H+++ILAGR+IND+M+KY+A N +K ++K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DKQVKGSTVAVFGITFKENCPDVRNTKVVDIINELKEYGIETKVIDPVADKDELWNTYGI  372
            + +V+G+TV V+G+TFKENCPD+RNTKV++II+ELKEYG++  V D  ADK+E  + +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELCNFEEISDIDAAVFAVPHNEFKSIR  399
            +L +  E+  +D  +FAVPH+++   +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK  390

206) TepRe1_1768 in NC_015519


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  381 bits (1432),  Expect = 5e-107, Method: Compositional matrix adjust.
 Identities = 222/387 (58%), Positives = 307/387 (80%), Gaps = 0/387 (0%)

Query  13   KISVTGLGYVGLPLAISFAKVADVVGFDISKEKVSQYLNGIDITKEVGDETIKQTTALLT  72
            +I+V GLGYVGLP+A++F++   V+GFDI+  ++ +  N  D T+EV ++ +K+T    T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   WEEKYLKDCKFHIVAVPTPINADKTPDLKPVINASKTLGRNLTNGSIVVYESTVYPGVTE  132
             +   LK   F I+AVPTPI+ ++ PDL P+++AS T+G+ +T ++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DICVPILEQESGLKGGVDFKVGYSPERINPGDKVHRLESIVKVVSGIDEESLETIAKVYE  192
            + CVP+LE+ SGL  G DF VGYSPERINPGDKVH +E+I KVVSG   E LE +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVVKAGVYRAKSIKVAEAAKVIENSQRDINIAFMNELSIIFNKMGIDTKAVLEAAGTKWN  252
             VV AGV +A SIKVAEAAKVIEN+QRD+NIA+MNEL+IIF+K++IDT+ VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFNPGLVGGHCIGVDPYYLTYKAEQIGYHSQIILAGRKINDDMGKYVAENAVKSMIKA  312
            FLNF+PGLVGGHCIGVDPYYLT KA+++G H+++ILAGR+IND+M+KY+A N +K ++K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  DKQVKGSTVAVFGITFKENCPDVRNTKVVDIINELKEYGIETKVIDPVADKDELWNTYGI  372
            + +V+G+TV V+G+TFKENCPD+RNTKV++II+ELKEYG++  V D  ADK+E  + +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELCNFEEISDIDAAVFAVPHNEFKSIR  399
            +L +  E+  +D  +FAVPH+++   +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK  390

207) Nwat_0480 in NC_014315


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  380 bits (1428),  Expect = 7e-107, Method: Compositional matrix adjust.
 Identities = 221/415 (54%), Positives = 320/415 (78%), Gaps = 2/415 (0%)

Query  8    RVGILGLGYVGLPLAVEFGKKFPTMGFDINPKRIAELKEGHDSTLEVEPELLAEATQLHY  67
             ++++GLGYVGLP+AV FG+K   +GFDIN  RI ELK+  D T EV  + L + T+++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  68   THQPQDLIACNVYIITVPTPIDEHKRPDLRPLESASRTVGKVLKRGDIAIFESTVYPGAT  127
            T +++DL   +  II+VPTPID H++PDL PL  AS TVGKV+  + I ++ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEVCVPILERESGLTYNQEFFAGYSPERINPGDKEHRVASICKVISASTVEATELVDQIY  187
            EE CVP+LE+ SGL   ++FF GYSPERINPGDK H   +I KV+S+ T+E  E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  ASIITAGTHKANSIRVAEAAKVIENTQRDVNIALINELAMLFNRLGIDTQEVLDAAATKW  247
            +S++TAG HKA+SI+VAEAAKVIENTQRDVNIAL+NELA++F++L+IDT+EVL A++TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGIDPYYLTHKAQAIGFQPEMILAGRRVNDGMGSYVASQIVKLMTQ  307
            NFL F+PGLVGGHCIG+DPYYLTHKAQ +G +PE+ILAGRR+ND M+ Y+AS+++K + +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIHVVDSRILILGLAFKENCPDLRNTRVMDIIAELKNYHAQIDIYDPWVDAKEARQEYG  367
            + ++V ++ + +LGL+FKENCPDLRNT+V++II ELK+Y  ++ + D   D +EA++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IALVTNLRDGYYDAIIVAVAHQQFTELNATGIRALGKPKSILYDVKHLLPKEAVD  422
            + L+        D ++ AV+H+++ E N  +   L K  +I++D+K ++  + ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

208) DMR_35790 in NC_012796


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  380 bits (1428),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 233/425 (55%), Positives = 316/425 (75%), Gaps = 6/425 (1%)

Query  14   VAVIGLGYVGLPLAVALARHFDVVGFDVKAARVAELQAGRDSTLEVSPEEMAEVSLRYTC  73
            +AV+GLGYVGLP+AV+++    V+GFD++ +R+ EL+   D T EV+ + + + ++ YT 
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTS  64

Query  74   DPADLTACKVFIVAVPTPINANRVPDLGPLVGASRLLGQHIGEGSVVVYESTVYPGLTEE  133
            ++ DL     +I+AVPTPI+ +  PDL PL+ AS  +G+ I  +++VVYESTVYPG TEE
Sbjct  65   NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEE  124

Query  134  VCVPLLEKGSGLSCGKDFFVGYSPERINPGDKVHTLSTVVKVVAGQTPEVTDLLADLYGS  193
             CVP+LEK SGL CGKDFFVGYSPERINPGDKVHT+ T+ KVV+GQT EV +++AD+Y+S
Sbjct  125  ECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSS  184

Query  194  VVTAGIHKAPSIKVAEAAKVIENTQRDINIALMNELSLICERLDIDTVDVLRAAETKWNF  253
            VVTAG+HKA+SIKVAEAAKVIENTQRD+NIALMNEL++I ++LDIDT +VL+A+ TKWNF
Sbjct  185  VVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNF  244

Query  254  LPFRPGLVGGHCIGVDPYYLLYKAQSLNLHPQVIPAGRRINDSMGKHIAEVAIKMLIRSE  313
            L F+PGLVGGHCIGVDPYYL  KAQ +  HP+VI AGRRIND+M+K IA   IK L++  
Sbjct  245  LNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQG  304

Query  314  CRASCARIGVLGLTFKENVPDLRNTKVVDIIRELGDFRMHVLVHDPMASSEEALEEYGLP  373
                 A + VLGLTFKEN PDLRNTKV++II EL ++ ++V V+D  A  +EA   +GL 
Sbjct  305  LEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLD  364

Query  374  LVGQEELRDLDALIIAVNHDAFKALSLEELATWFRPTAT-PILIDVKGIHERAASEAAGF  432
            L++  EL+ +D +++AV H  +    +E+    +       I++D+KGI +    + +  
Sbjct  365  LIDTKELKMVDVVLFAVPHKDY----MENKKDYINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  433  RYWRL  437
            R WRL
Sbjct  420  RLWRL  424

209) Pedsa_3228 in NC_015177


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  380 bits (1428),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 223/425 (53%), Positives = 321/425 (76%), Gaps = 14/425 (3%)

Query  7    DKRIAVLGLGYVGLPLACLFATKYPVVGFDIDEERIAALRGGYDRTGEVEKKRLLDLTLS  66
            ++ IAV+GLGYVGLP+A  F+ K  V+GFDI+E RI  L+  YDRT EV  ++L      
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL------  55

Query  67   ETPFFSEHEGIYFSADIESIRSANVYIITVPTPVDKNNHPDMRLLFKASEIVGKVISNGD  126
                   +  I ++++ E ++ A+  II+VPTP+DK+N PD+  L+KASE VGKVI+ + 
Sbjct  56   ------KNTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDT  109

Query  127  VVIYESTVYPGATEEDCVPIIESVSGLNYNKDFFVGYSPERINPGDRERTVEKIRKITSG  186
            +V+YESTVYPGATEE+CVP++E  SGL   KDFFVGYSPERINPGD+ +T E I K+ SG
Sbjct  110  IVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSG  169

Query  187  SNPQTALTVDELYKSVIVAGTYLAPTIKVAEAAKVIENSQRDINIAFVNELAIMFNLMGI  246
               +    V ++Y SV+ AG   A++IKVAEAAKVIEN+QRD+NIA++NELAI+F+ ++I
Sbjct  170  QTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDI  229

Query  247  DTQEVLAAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQQYGYHPEILLAGRRLNDAMG  306
            DT+EVL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQ+ G HPE++LAGRR+ND M+
Sbjct  230  DTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMA  289

Query  307  EYVASQIVKCMVKKDINIKGAEVLMLGFTFKENCSDVRNTKVIDIVENLMDYGLDVVVYD  366
             Y+AS+++K ++K++++++GA V +LG+TFKENC+D+RNTKVI+I+E+L +YGL+V V D
Sbjct  290  KYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVND  349

Query  367  PYADHAEVEKQYGVKCQSSLDTKKYDALVLAVAHQEFETIR--FGDLKKDKSIIYDVKGL  424
              AD  E  K +G+    + + K  D +++AV+H+++   +  + +L KD +I++D+KG+
Sbjct  350  VEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGI  409

Query  425  LPYAD  429
            +   +
Sbjct  410  INSDE  414

210) ebA35 in NC_006513


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  380 bits (1427),  Expect = 9e-107, Method: Compositional matrix adjust.
 Identities = 228/423 (54%), Positives = 322/423 (77%), Gaps = 3/423 (0%)

Query  4    IAVIGLGYVGLPLAVEFGKKFKTIGFDLSADKVAAYRDFVDPTGEVSSDDLRAAIHLGCH  63
            IAV+GLGYVGLP+AV FG+K K IGFD++  ++   ++  D T EV+ + L+ + ++   
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEYT  63

Query  64   SDPAHIREADFIVVAVPTPVDIAHKPDFTPLIHSSETVGRNLKRGAVVVFESTVYPGATE  123
            S++ +++ ADFI++AVPTP+D  +KPD+ PL+ +SETVG+ +  +++VV+ESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  124  EVCIPIIERESGLKWKQDFFVGYSPERINPGDKERTVTKIVKVVSGDTPQTLQKVKEVYG  183
            E C+P++E+ SGL   +DFFVGYSPERINPGDK +T   I KVVSG+T + L+ V +VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  184  AIISAGVYPASSIKVAEAAKVIENTQRDLNIALMNELAVIFHKIGIDTTEVLQAAGTKWN  243
            ++++AGV  ASSIKVAEAAKVIENTQRD+NIALMNELA+IF+K++IDT EVL+A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  244  FLPFRPGLVGGHCIGVDPYYLTHKAEMLGHHPQVILAGRRINDGMGKYVAEQTVKQMIQA  303
            FL F+PGLVGGHCIGVDPYYLTHKA+ +GHHP+VILAGRRIND M+KY+A + +K++++ 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  304  GHSIRGCDVIVLGLTFKENCPDLRNSKVIDVIRELESFGCTVHVHDPVAAPAEAAREYGM  363
            G  ++G  V VLGLTFKENCPDLRN+KVI++I EL  +G  V V+D  A   EA + +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  364  RLEPWEalpkaaamvaavshaPYLDMQLDEFAGKLLPGGVFSDVKSSYDADALAKAGVTV  423
             L     L     ++ AV+H  Y++ +  ++   +   G+  D+K+  ++D L + +  +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDEL-NVSQRL  421

Query  424  WRL  426
            WRL
Sbjct  422  WRL  424

211) Tint_1300 in NC_014153


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  379 bits (1426),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 239/407 (59%), Positives = 317/407 (78%), Gaps = 3/407 (0%)

Query  20   FGKKYRTIGFDLSVEKIAAYCKHVDPTGEVSQENLKQATLLEPTTDASKLKEADFVIVAV  79
            FG+K + IGFD++  +I    ++ D T EV++++LK++ + E T++A  LK ADF+I+AV
Sbjct  21   FGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EYTSNAEDLKKADFIIIAV  79

Query  80   PTPVDDAHNPDFSPLVGASTSVGKYLKPGAIVVYESTVYPGATEEICVPILEKQSGLKWK  139
            PTP+D  ++PD+ PL+ AS +VGK + P++IVVYESTVYPGATEE CVP+LEK SGL   
Sbjct  80   PTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCG  139

Query  140  KDFFVGYSPERINPGDKEHTLTRIVKVVSGDTLETLETVANVYASVITAGVHRAESIKVA  199
            KDFFVGYSPERINPGDK HT+  I KVVSG+TLE LE VA+VY+SV+TAGVH+A SIKVA
Sbjct  140  KDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVA  199

Query  200  EAAKVIENTQRDLNIALMNELSLIFHRIGIDTLDVLKAAGTKWNFLPFRPGLVGGHCIGV  259
            EAAKVIENTQRD+NIALMNEL++IF++++IDT +VLKA+GTKWNFL F+PGLVGGHCIGV
Sbjct  200  EAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGV  259

Query  260  DPYYLTHKADMLGYHPQVILAGRRINDGMGKYIAEQTIKQMSQAGLPIKGSDVIVLGLTF  319
            DPYYLTHKA+ +G HP+VILAGRRIND M+KYIA + IK++ + GL ++G+ V VLGLTF
Sbjct  260  DPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTF  319

Query  320  KENCPDLRNSKVIDVIRELASYGVNVIVHDPIADAGEAVHEYGVTLTPWAELPRaqaiva  379
            KENCPDLRN+KVI++I EL  YG+NV V+D  AD  EA   +G+ L    EL   + ++ 
Sbjct  320  KENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLF  379

Query  380  avahqaYKDMSVAETLEKLLPSGIFMDIKCQYDAAALQSHGAQVWRL  426
            AV+H+ Y +    + ++ +   GI  DIK   ++  L+  + ++WRL
Sbjct  380  AVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNV-SQRLWRL  424

212) Bpet0233 in NC_010170


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  379 bits (1426),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 224/423 (53%), Positives = 317/423 (75%), Gaps = 1/423 (0%)

Query  10   KKIAVCGLGYVGLPVAVAFSKRFDVIGFDVDKRRIARLKEGHDWTGEIERDVLLASSMRF  69
            ++IAV GLGYVGLPVAV+F+++  VIGFD++  RI  LK+  D+T E+  + L  +++ +
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  70   TDQVTELQGCDFFVVAVPTPVDERNNPDFSLLVRACQSIGPVLRPGCIVVFESTVHPGAT  129
            T +  +L+  DF+++AVPTP+D +N+PD+  L++A +++G V+ P+ IVV+ESTV PGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  130  EEICGPELEKASGLRCGVDFKLGYSPERINPGDRQHPLEKIVKIVSGQDEASLEIIAGVY  189
            EE C P LEK SGL CG DF +GYSPERINPGD+ H +E I K+VSGQ    LEI+A+VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  190  EKIIDAGVHRASSIKVAEAAKVLENTQRDINIALMNEMSKICDLVGIRTSEVLSAAGTKW  249
              ++ AGVH+ASSIKVAEAAKV+ENTQRD+NIALMNE++ I D ++I T+EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  250  NFLNFTPGLVGGHCIGVDPYYLTSKAQELGYHPEVILSGRRINDGMASHVAARVVQTLAR  309
            NFLNF PGLVGGHCIGVDPYYLT KAQE+G HPEVIL+GRRIND MA  +A+ V++ L +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  310  NGRLNASTRVGILGMTFKENVPDIRNSKVVDLYNALGDYGITPVACDPMVDADQMEHEYG  369
            +G    ++ V +LG+TFKEN PD+RN+KV+++ + L +YG+     D   D ++    +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  370  IKLVKRDEFRDMDVLILAVPHRETMDSIWDDMPNLVKSGGMVCDLKSVLDSKRLQSDLVY  429
            + L+   E++ +DV+++AVPH++ M++   D  NLVK  G+V D+K++++S  L+     
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMEN-KKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

Query  430  WTL  432
            W L
Sbjct  422  WRL  424

213) wbpO in NC_006513


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  379 bits (1424),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 230/406 (57%), Positives = 311/406 (77%), Gaps = 2/406 (0%)

Query  8    NLAIIGLGYVGLPLAVEFGRKQHVTGFDIHAERIAELQAGRDRTLEVDARELAAAEYLRF  67
            N+A++GLGYVGLP+AV FG K+ V GFDI+  RI EL+   DRT EV    L  ++ + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  68   TADPADLAECNVFIVTVPTPIDEHKRPDLTPLIRASETIGKVLKRGDIVIFESTVYPGAT  127
            T+++ DL   + +I++VPTPID H++PDL PL++ASET+GKV+  + IV++ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEECVPVLERVSGLRFNHDFYAGYSPERINPGDKAHRVSTIKKVTSGSTPQVADLVDALY  187
            EEECVPVLE+ SGL    DF+ GYSPERINPGDK H   TI KV SG T +V ++V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  ARIITAGTHKAPSIKVAEAAKVIENTQRDlnialinelaiiFNKLGIDTEAVLEAAGTKW  247
            + ++TAG HKA+SIKVAEAAKVIENTQRD+NIAL+NELAIIF+KL+IDT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDGMGAYVVSQLVKAMLK  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND M+ Y+ S+++K +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIQVEGARVLVMGLAFKENCPDLRNTRVVDIVRELADYNVRVDVFDPWVDADEARHEYD  367
            + ++V+GA V V+GL+FKENCPDLRNT+V++I+ EL +Y + V V D   D +EA+  ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  ITPIELPTPGQYDAVLVAVAHDQFKAMSAQGIRALGKPEHVLYDLK  413
            +  I+       D VL AV+H ++   + ++   L K   +++D+K
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIK  407

214) FB2170_10011 in NC_014472


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  379 bits (1423),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 233/427 (55%), Positives = 319/427 (75%), Gaps = 14/427 (3%)

Query  5    KIAIIGLGYVGLPLARLFGTKYPTIGFDINEGRVQELMNGHDSTLEVDDATLRNVLSKTS  64
            +IA++GLGYVGLP+A  FG K   IGFDINE+R++EL N  D T EV +  L+N     +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-----T  58

Query  65   KMDAGLFCTNQLGDIEDCNYYIVTVPTPVDSTNRPILTPLYRASETVGKVLKKGDTVIYE  124
            +++     T++  D+   ++ I++VPTP+D  N+P L PL +ASETVGKV+  +  V+YE
Sbjct  59   NIE----YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  125  STVYPGVTEEECIPVLEKTSGLSFNSDFFAGYSPERINPGDKEHTVEKILKVTSGSTPEV  184
            STVYPG TEEEC+PVLEK SGL    DFF GYSPERINPGDK HT E I KV SG T EV
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  185  GKKVDALYASVITAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNLMGIDTHQV  244
               V  +Y+SV+TAG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF+ ++IDT++V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  245  LEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEFGYHPEIILAGRRMNDTMGKYVAS  304
            L A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND M+KY+AS
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  305  EVIKLMVQKDIKIKGSNILVLGITFKENCPDVRNTKAVDVINNLASYGTMVHIYDPWASK  364
            +VIK ++++++ ++G+ + VLG+TFKENCPD+RNTK +++I++L  YG  V + D  A K
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  365  EEVANEYGLEVSNNPPSSTFDAVVLTVSHKEYL--KLDISKLLNENAVVYDTKGILGD--  420
            +E  + +GL++ +       D V+++V+HK+Y+  K D  +L+++ ++V+D KGI+    
Sbjct  355  NEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414

Query  421  -TVDGRL  426
              V  RL
Sbjct  415  LNVSQRL  421

215) BBR47_42590 in NC_012491


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  379 bits (1424),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 216/411 (53%), Positives = 317/411 (78%), Gaps = 2/411 (0%)

Query  20   PVAIAFSQVLPVVGFDIDERRIRSLESGMDETGEMSTEELMRANITYTDDPASLATCDFI  79
            PVA++F++   V+GFDI+E RI+ L +  D T E++ + L  +NI YT ++  L   DFI
Sbjct  16   PVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFI  75

Query  80   IITVPTPVDSAKRPDMRALTLASESVGQYLTSGTIVVYESTVYPGATEEICIPVLEKASG  139
            II+VPTP+D  ++PD+ +L  ASE+VG+ +T++TIVVYESTVYPGATEE C+PVLEK SG
Sbjct  76   IIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSG  135

Query  140  KLAGIDFFVGYSPERINPGDRERRLSQIVKVVSGQDRQTCETIAEMYGLIVEAGIHKAPS  199
             + G DFFVGYSPERINPGD+ + +  I KVVSGQ  +  E +A++Y+ +V AG+HKA+S
Sbjct  136  LVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASS  195

Query  200  IQVAEAAKVIENTQRDINIALINELSIIFDRLGISTADVLQAARTKWNFLPFSPGLVGGH  259
            I+VAEAAKVIENTQRD+NIAL+NEL+IIFD+L+I T +VL+A+ TKWNFL F PGLVGGH
Sbjct  196  IKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGH  255

Query  260  CIGVDPYYLTYKAESVGYHPQVILAGRRINDGMGKFVATSLVKQMIWQNIAIQGSRITIM  319
            CIGVDPYYLT KA+ VG HP+VILAGRRIND M+K++A++++K+++ Q + +QG+ + ++
Sbjct  256  CIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVL  315

Query  320  GITFKENVSDIRNSRVIDIIQELKEFGVEVQVTDELACPERTREEYGIQLREWEDLQPAH  379
            G+TFKEN +D+RN++VI+II+ELKE+G++V V D  A  + ++  +G++L +  +L+  +
Sbjct  316  GLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVD  375

Query  380  GIVLAVPHERYLHLGWEELAGLLYQGQGVIADVKSVLNRETCPAEISLWRL  430
             +++AVPH  Y++    +   L+ ++ G++ D+K+++N +       LWRL
Sbjct  376  VVLFAVPHKDYME-NKKDYINLV-KDCGIVFDIKGIINSDELNVSQRLWRL  424

216) Oscil6304_3548 in NC_019693


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  379 bits (1424),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 226/430 (53%), Positives = 326/430 (76%), Gaps = 9/430 (2%)

Query  1    MSEKIAIIGLGYVGLPLAIALAKQFPDTVGFDINPEKIHALTQGIDATGEVCLNNLKSTS  60
            M+ +IA++GLGYVGLP+A++++++    +GFDIN  +I  L +  D T EV  N+LK+T+
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  61   LQFTSDPNHLKSSNFFIVAVPTPIDSNHHPDLTPLIRASELVGRVLQPGSVVVYESTVYP  120
            +++TS++++LK ++F+I+AVPTPID ++ PDL PL++ASE VG+V+ P+++VVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GVTEETCGTILAQESGLRPGIDFKLGYSPERINPGDPEHRLETIIKVVAGEDAETLERVA  180
            G TEE C  +L + SGL  G DF +GYSPERINPGD  H +ETI KVV+G+  E LE VA
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  QVYESIIKAGIYRAPSIKVAESAKVIENIQRDLNIALMNELALIFDRLNISTHEVLAAAG  240
            +VY S++ AG+ +A+SIKVAE+AKVIEN QRD+NIALMNELA+IFD+L+I T+EVL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFKPGLVGGHCIGVDPYYLTAKAKQVGYRPEVILAGRRINDNMGRYLGQRLIKL  300
            TKWNFL FKPGLVGGHCIGVDPYYLT KA++VG +PEVILAGRRINDNM++Y++  +IK 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  LTNHENIPIKQVRVGILGMTFKENVPDTRNTRVPDIVAELEQFGIRPLVHDPIANPEEVH  360
            L ++  + ++   V +LG+TFKEN PD RNT+V +I+ EL ++G+   V+D  A+ +E  
Sbjct  300  LLKQ-GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  361  QVYDISLSPWSEFFALDALILAVPHRQYLECSPD--ELI-ECLNPEGIFMDIKSVLGPSL  417
            + +++ L    E+  +D +++AVPH++Y+E   D  +L+ +C    GI  DIK+++ +  
Sbjct  359  KFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDC----GIVFDIKGIINSDE  414

Query  418  FPSKIVYWSL  427
            +      W L
Sbjct  415  LNVSQRLWRL  424

217) TK90_0611 in NC_013889


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  379 bits (1423),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 218/414 (53%), Positives = 309/414 (75%), Gaps = 3/414 (0%)

Query  11   RLAIIGLGYVGLPLAAEFGRVLPTLGFDIDTGRVEELRGGHDRTREVSReelaaaehlel  70
             +A++GLGYVGLP+A  FG     +GFDI+ +R+ EL+   DRT EV+ E+     ++E 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVT-ENKLKNTNIEY  62

Query  71   taDPGRLQDCNVFIVTVPTPIDAHRRPDLGPLLAASRTVGRALKPGDVVIYESTVYPGAT  130
            T+++  L+  + +I++VPTPID H +PDL PLL AS TVG+ + P+ +V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  131  EEDCAPVLATESGLELNRDFFLGYSPERVNPGDKEHRIPDIVKVTSGSTPEVAEFVNALY  190
            EE+C PVL   SGL   +DFF+GYSPER+NPGDK H +  I KV SG T EV E+V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  191  ARIIRAGTHPAASIRVAEAAKVIENTQRDVNIALINELAMLFERLDLDTEAVLAAAGTKW  250
            + ++ AG H A+SI+VAEAAKVIENTQRDVNIAL+NELA++F++LD+DT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  251  NFLPFRPGLVGGHCIGVDPYYLTHKAQAANYHPEMILAGRRTNDGMGGYIADRTIKSMIR  310
            NFL F+PGLVGGHCIGVDPYYLTHKAQ    HPE+ILAGRR ND M+ YIA   IK +++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  311  KGFPVVASRVLVMGLAFKENCPDLRNTRVVDIIHDLHGYNAEVDVWDPWVDTAEARHEYG  370
            +G+ V ++ V V+GL+FKENCPDLRNT+V++II++L  Y  +V V D   D  EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  371  LDLLTEAPKQGQYDAIILAVPHHEFVELGAQGLQKFGRERAVIFDVKSVLPPEA  424
            LDL+ ++      D +++AVPH +++E   ++  ++ ++ +++FD+K+++ ++ 
Sbjct  363  LDLI-DTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE  414

218) TVNIR_0671 in NC_019902


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  379 bits (1423),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 227/431 (53%), Positives = 320/431 (75%), Gaps = 8/431 (1%)

Query  6    ESPLAIIGLGYVGLPLAVEFAKRRDVIGFDINAARIAALQGGHDATLEVADDELRQTMAS  65
            +  +A++GLGYVGLP+AV F++++ VIGFDIN +RI  L+   D T EV+++ L++T   
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---  58

Query  66   GRLRFTTNPQDIAACtiyivtvptpitEEKRPDLRPLLSASKTVGPLLKPGDIVIYESTV  125
              + +T+N++D+    + I++VPTPI  +++PDL PLL AS TVG ++ P+ IV+YESTV
Sbjct  59   -NIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTV  117

Query  126  YPGCTEEDCVPVLERESGLRCNEGFYVGYSPERINPGDKEHRVSTIKKVTAGSTPEIAET  185
            YPG TEE+CVPVLE+ SGL C  +F+VGYSPERINPGDK H   TI KV +G T E+ E 
Sbjct  118  YPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEI  177

Query  186  IDALYREIITAGTHKAESIRVAEAAKVIENTQRDLNIALMNELSVLFARLGIDTDAVLRA  245
            +  +Y  ++TAG HKA SI+VAEAAKVIENTQRD+NIALMNEL+++F +L+IDT+ VL+A
Sbjct  178  VADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKA  237

Query  246  AGTKWNFLPFRPGLVGGHCIGVDPYYLTEKAERVGYIPQVILSGRRINDNMGRYVARTTL  305
            +GTKWNFL F+PGLVGGHCIGVDPYYLT+KA+ VG  P+VIL+GRRINDNM++Y+A   +
Sbjct  238  SGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVI  297

Query  306  KKMIQNGTDVTQATVGVLGLTFKENCPDLRNSRVIDIIRELQDYGVRVVAEDPYAHPEEV  365
            K ++++G +V  ATV VLGLTFKENCPDLRN++VI+II EL++YG+ V  +D  A+ +E 
Sbjct  298  KELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNE-  356

Query  366  AHEYPGVELGRIDAEHPVDALVVAVGHDVYAERDAQTLRTLLRGEKPVLADVKSLYDRHA  425
            A  + G++L        VD ++ AV H  Y E   + +   L  +  ++ D+K++ + + 
Sbjct  357  AKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN--LVKDCGIVFDIKGIINSDE  414

Query  426  LAEAGVTVWRL  436
            L + +  +WRL
Sbjct  415  L-NVSQRLWRL  424

219) TEQUI_0942 in NC_014914


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  378 bits (1422),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 227/416 (55%), Positives = 321/416 (78%), Gaps = 2/416 (0%)

Query  7    KLAVIGLGYVGLPLAVEFGKKRDVLGFDINQKRIEQLMKGEDITLEVDNSELAEAKNLNF  66
            ++AV+GLGYVGLP+AV FG+K+ V+GFDIN+ RI +L +  D T EV ++ L ++ N+++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   SCNPEDLRDSNTYIITVPTPIDEHKSPDFTPLVKASETIGAYLKKGDIVIYESTVYPGAT  126
            + N+EDL+ ++  II+VPTPID H+ PD+ PL+KASET+G  +  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKYNVDFYAGYSPERINPGDKQHRVYNIKKVTSGSTPEVAQVVDDLY  186
            EE C+PVLEK SGL    DF+ GYSPERINPGDK H    I KV SG T EV ++V D+Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  KSIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALLCNRLGIDTEDVLEAAGTKW  246
             S++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA++ ++L+IDT++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGRYVVEQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M++Y+  +++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KNIKVVGSHVLVMGLTFKENCTDIRNTRIVDIVKELGDYNIVVDVYDPWVDPEEAMQEYG  366
            + + V G+ V V+GLTFKENC D+RNT++++I+ EL +Y + V V D   D +EA + +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  IKTVDSVSDGQYDGIILAVGHKEFREMGVDKIRALGKENHVLYDLKYVLDKEDSDI  422
            +  +D+      D +++AV HK++ E   D I  L K+  +++D+K +++ ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

220) Daro_2440 in NC_007298


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  378 bits (1420),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 236/424 (56%), Positives = 325/424 (77%), Gaps = 3/424 (0%)

Query  3    TIAVVGLGYVGLPLAVEFGKKYRTIGFDLSTHKIECYKKHYDPTGEVSTDDLKAATLLEV  62
             IAVVGLGYVGLP+AV FG+K + IGFD++  +I   K++YD T EV+ + LK + + E 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EY  62

Query  63   GTDPAAIREadfvvvavptpvddaHQPDFSPLVGSSTAVGQNLKQGAIVVFESTVYPGAT  122
             +++  ++ ADF+++AVPTP+D  ++PD+ PL+ +S +VG+ +  ++IVV+ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  123  EEVCIPIIERESGKTWKKDFFVGYSPERINPGDKERTVTKIIKIVSGDTPETLATVQEIY  182
            EE C+P++E+ SG    KDFFVGYSPERINPGDK +T   I K+VSG+T E L  V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  183  GSIITAGVYPASNIKVAEAAKVIENTQRDLNIALMNELAIIFDKIGIDTLEVLQAAGTKW  242
            +S++TAGV  AS+IKVAEAAKVIENTQRD+NIALMNELAIIFDK++IDT EVL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  243  NFLPFRPGLVGGHCIGVDPYYLTHKAQKLGYHPEVILAGRRINDGMGKFIAEQTIKMLVK  302
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPEVILAGRRIND M+K+IA + IK L+K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  303  AGHPVKDCPIIVLGLTFKEDCPDLRNSRVIDVIRELESYGAKVVVHDPVADAAEARHEYG  362
             G  V++  + VLGLTFKE+CPDLRN++VI++I EL  YG +V V+D  AD  EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  363  VDLVAWNDLPKAAAIVAAVNHKEYKALPIGDFLARLEKDGVIADVKSMLDSKAFSENGIT  422
            +DL+  ++L     ++ AV HK+Y      D++  +   G++ D+K++++S  ++ +   
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ-R  420

Query  423  VWRL  426
            +WRL
Sbjct  421  LWRL  424

221) Alvin_2213 in NC_013851


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  378 bits (1420),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 227/418 (55%), Positives = 322/418 (78%), Gaps = 2/418 (0%)

Query  10   VSTRIGILGLGYVGLPLAVEFGKRYQTIGFDINAARIAELRAGRDSSLEVEPDELRTASR  69
            ++  I+++GLGYVGLP+AV FG++ + IGFDIN +RI EL+   D + EV  + L+ ++ 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-  59

Query  70   LEYADAIEALADCHVLIVTVPTPINAHKQPDFGPLESASRAIGSIIKPGTIVVFESTVYP  129
            +EY+   E L   + +I++VPTPI+ H++PD+ PL  AS ++G +I P+TIVV+ESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  130  GATEEVCIPIIERLSGLTYNRDFYAGYSPERINPGDKAHRLTTIKKVTSGSTPEVARFVD  189
            GATEE C+P++E+ SGL   +DF+ GYSPERINPGDK H + TI KV SG T EV  +V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  190  ALYGSIITAGTHLASSIRVAEAAKVIENTQRDlnialinelaliFNRLGLDTLEVLEAAG  249
             +Y+S++TAG H ASSI+VAEAAKVIENTQRD+NIAL+NELA+IF++L++DT EVL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  250  TKWNFLPFRPGLVGGHCIGVDPYYLTHKAQEIGYHPKVILAGRRVNDGMGAYVAGEVIKL  309
            TKWNFL F+PGLVGGHCIGVDPYYLTHKAQE+G HP VILAGRR+ND M+ Y+A++VIK 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  310  MVRRGSLHQGSRVLVLGLTFKENCPDLRNTRVVDILAELQDYGLSCDVHDPWANPAEAEH  369
            ++++G   QG+ V VLGLTFKENCPDLRNT+V++I+ EL++YGL+  V+D  A+  EA  
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  370  EYDLKLVQHPEHGTYDAIILAVAHREFADWGAERIRAFGKPGAILYDVKQLFPRDAVD  427
             ++L L++  E    D +++AV+H+++ +   + I  + K  +I++D+K ++  D ++
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

222) Oweho_3303 in NC_016599


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  378 bits (1421),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 232/429 (55%), Positives = 322/429 (76%), Gaps = 16/429 (3%)

Query  5    DKKIAVIGLGYVGLPLAVEFGKKFPTVGFDINTVRIDQLQKGEDVTLEVENEYLKSVVVD  64
            +++IAV+GLGYVGLP+AV FG+K   +GFDIN  RI +L++  D T EV ++ LK+  ++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  65   NPMAINNRGLYCTSSIGDMSDCNVFIVTVPTPTDKYNRPVLTPLVKSSETVAAVLKKGDI  124
                        TS+  D+   + +I++VPTP DK N+P L PL+K+SETV+ V+  + I
Sbjct  62   -----------YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTI  110

Query  125  VIYESTVYPGVTEDECVPVLEANSGLKYNEDFFVGYSPERINPGDKEHTVTKILKVTSGS  184
            V+YESTVYPG TE+ECVPVLE  SGL    DFFVGYSPERINPGDK HT   I KV SG 
Sbjct  111  VVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQ  170

Query  185  TPEIADVVDAIYREVIIAGTHKAPSIKVAEAAKVIENSQRDINIAFVNELSKIFNRLGID  244
            T E+ ++V  +Y  V+ AG HKA+SIKVAEAAKVIEN+QRD+NIA++NEL+ IF++L+ID
Sbjct  171  TLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDID  230

Query  245  TLEVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEVGYHPEIILAGRRLNDGMGA  304
            T EVL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQEVG HPE+ILAGRR+ND M+ 
Sbjct  231  TNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAK  290

Query  305  YVATEVVKCMLKKDIAITSSKVLMLGITFKENCPDIRNSRAIDIINELKTYDIQVDVFDP  364
            Y+A++V+K +LK+++ + ++ V +LG+TFKENCPD+RN++ I+II+ELK Y+++V V D 
Sbjct  291  YIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDV  350

Query  365  WANEEEVKHEYGIDLITSFEALDKASYDGVVLGVAHNSYLEL--DIAGLRKENSVMYDVK  422
             A+ +E K  +G+DLI +   L     D V+++V+H+ Y+E   D   L K+ ++++D+K
Sbjct  351  EADKNEAKKFFGLDLIDT-KELKMV--DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIK  407

Query  423  GIWPKDQID  431
            GI   D+++
Sbjct  408  GIINSDELN  416

223) wbpO in NC_021036


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  378 bits (1421),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 226/416 (55%), Positives = 321/416 (78%), Gaps = 2/416 (0%)

Query  7    KLAVIGLGYVGLPLAVEFGKKRDVLGFDINQKRIEQLMKGEDITLEVDNSELAEAKNLNF  66
            ++AV+GLGYVGLP+AV FG+K+ V+GFDIN+ RI +L +  D T EV ++ L ++ N+++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   SCNPEDLRDSNTYIVTVPTPIDEHKSPDFTPLVKASETIGAYLKKGDIVIYESTVYPGAT  126
            + N+EDL+ ++  I++VPTPID H+ PD+ PL+KASET+G  +  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKYNVDFYAGYSPERINPGDKQHRVYNIKKVTSGSTPEVAQVVDDLY  186
            EE C+PVLEK SGL    DF+ GYSPERINPGDK H    I KV SG T EV ++V D+Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  KSIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALLCNRLGIDTEDVLEAAGTKW  246
             S++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA++ ++L+IDT++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGRYVVEQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M++Y+  +++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KNIKVVGSHVLVMGLTFKENCTDIRNTRIVDIVKELGDYNIVVDVYDPWVDPEEAMQEYG  366
            + + V G+ V V+GLTFKENC D+RNT++++I+ EL +Y + V V D   D +EA + +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  IKTVDSVSDGQYDGIILAVGHKEFREMGVDKIRALGKENHVLYDLKYVLDKEDSDI  422
            +  +D+      D +++AV HK++ E   D I  L K+  +++D+K +++ ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

224) wbpO in NC_018108


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  378 bits (1421),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 226/416 (55%), Positives = 321/416 (78%), Gaps = 2/416 (0%)

Query  7    KLAVIGLGYVGLPLAVEFGKKRDVLGFDINQKRIEQLMKGEDITLEVDNSELAEAKNLNF  66
            ++AV+GLGYVGLP+AV FG+K+ V+GFDIN+ RI +L +  D T EV ++ L ++ N+++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  67   SCNPEDLRDSNTYIVTVPTPIDEHKSPDFTPLVKASETIGAYLKKGDIVIYESTVYPGAT  126
            + N+EDL+ ++  I++VPTPID H+ PD+ PL+KASET+G  +  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEVCIPVLEKVSGLKYNVDFYAGYSPERINPGDKQHRVYNIKKVTSGSTPEVAQVVDDLY  186
            EE C+PVLEK SGL    DF+ GYSPERINPGDK H    I KV SG T EV ++V D+Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  KSIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALLCNRLGIDTEDVLEAAGTKW  246
             S++TAG HKASSI+VAEAAKVIENTQRDVNIAL+NELA++ ++L+IDT++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGRYVVEQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M++Y+  +++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KNIKVVGSHVLVMGLTFKENCTDIRNTRIVDIVKELGDYNIVVDVYDPWVDPEEAMQEYG  366
            + + V G+ V V+GLTFKENC D+RNT++++I+ EL +Y + V V D   D +EA + +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  IKTVDSVSDGQYDGIILAVGHKEFREMGVDKIRALGKENHVLYDLKYVLDKEDSDI  422
            +  +D+      D +++AV HK++ E   D I  L K+  +++D+K +++ ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

225) Cphy_2214 in NC_010001


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  378 bits (1421),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 219/429 (52%), Positives = 319/429 (75%), Gaps = 6/429 (1%)

Query  11   DEKLAVVGLGYVGLPIAVAFAKKIKTIGFDINQQKISEYLNGKDPTQEVGTEVIRKTTLE  70
            + ++AVVGLGYVGLP+AV+F++K K IGFDIN+ +I E  N  D T+EV  + +++T +E
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  71   FTCSEEKLRESKFIIVAVPTPIHTDKTPDLSPVTGACEIVGRNLTKDAIVVFESTVYPGV  130
            +T + E L+ + FII+AVPTPI+ ++ PDL P+  A E VG+ +T D+IVV+ESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  131  TEEVCIPILENISGLSCGTDFKIGYSPERINPGDKHHKLNNIIKIVSGIDTEAREIIAKV  190
            TEE C+P+LE+ SGL CG DF +GYSPERINPGDK H ++ I K+VSG   E  EI+A V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  191  YELIIDAGVHLVTNIKTAEAAKLVENAQRDINIAFMNELAMVFEKMDINTQEVVEAMNTK  250
            Y  ++ AGVH  ++IK AEAAK++EN+QRD+NIA+MNELA++F+K+DI+T+EV+ A  TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  251  WNALGFTPGLVGGHCIGVDPYYFIYQAEKLGYHSQIILSGRKINDGMGSFIGDIVIKKLI  310
            WN L F PGLVGGHCIGVDPYY+  +A+ +G H+++IL+GR+IND M+ +I+  VIK L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  311  KTNKLVNQAKIYILGITFKENCPDIRNSKVIDIINRLKEYDVTVNVVDPVADEKEVKSFY  370
            K    V+ A + +LG+TFKENCPD+RN+KVI+II+ LKEY++ V V D  AD +E K F+
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  371  DINMVKLSEVKEADCIIIAVAHNEFRKLSKDDLDQMFRALPAEEKVVIDIKSIFPKSEME  430
            +++++   E+K  D +++AV+H+++    KD     +  L  +  +V+DIK+I+   E++
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKD-----YINLVKDCGIVFDIKGIINSDELN  416

Query  431  AMGYSYWSL  439
             ++   W L
Sbjct  417  -VSQRLWRL  424

226) DDD_3559 in NC_020156


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  377 bits (1419),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 232/422 (55%), Positives = 326/422 (78%), Gaps = 14/422 (3%)

Query  1    MKKDKITIIGLGYVGLPLARLFATKYAVVGYDISKARVKELRAGIDKTLEVEKNILQDVL  60
            M+++ I+++GLGYVGLP+A  F+ K  V+G+DI+ +R+KEL+   D+T EV  N L++  
Sbjct  1    MNRN-IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  61   KEDNSHEEGLYCTSDVNEIKDSNIYVITVPTPVDKNNKPILSPLFKASETVGKALSKNDI  120
             E          TS+ +++K +++ +I+VPTP+DK+NKP L PL+KASETVGK ++ + I
Sbjct  60   IE---------YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTI  110

Query  121  VVYESTVYPGATEDECVPVLEKNSGLNFNVDFFVGYSPERINPGDKEHTIDKILKVTSGS  180
            VVYESTVYPGATE+ECVPVLEK SGL    DFFVGYSPERINPGDK HT++ I KV SG 
Sbjct  111  VVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQ  170

Query  181  TEDIGVKVNDLYKSVISAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNLLEIN  240
            T ++   V D+Y SV++AG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF+ L+I+
Sbjct  171  TLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDID  230

Query  241  TNDVLEAARTKWNFLPFTPGLVGGHCIGVDPYYLAQKAQQVGYHPEIILAGRRMNDSMAS  300
            TN+VL A+ TKWNFL F PGLVGGHCIGVDPYYL++KAQ+VG HPE+ILAGRR+ND+MA 
Sbjct  231  TNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAK  290

Query  301  YVASQVVKLMLKNDISVKNSEVLVLGVTFKENCPDVRNTKSIDVVNQLKEYGMKVTLHDP  360
            Y+AS+V+K +LK+++ V+ + V VLG+TFKENCPD+RNTK I+++++LKEYG++VT++D 
Sbjct  291  YIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDV  350

Query  361  IASPAEVYKEYGVKCESSLTIKTYDAIVLTVAHSYYHSFDIKQFMNHL---TVVYDVKGI  417
             A   E  K +G+    +  +K  D ++++V+H  Y   + K+++N +    +V+D+KGI
Sbjct  351  EADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGI  409

Query  418  LG  419
            + 
Sbjct  410  IN  411

227) EAT1b_1374 in NC_012673


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  377 bits (1418),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 224/398 (57%), Positives = 309/398 (78%), Gaps = 6/398 (1%)

Query  46   DINETRINELNHHLDSTREVESVDLEQAAVLYTTDVAKLGEADFIIVAVPTPINDQNQPD  105
            DINE+RI+EL+++ D T EV    L ++ + YT++   L  ADFII+AVPTPI+ +N+PD
Sbjct  31   DINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPD  90

Query  106  LGPICSATRAVGAHLRPGTIVVYESTVYPGLTEEECIPLLEKTSGLRAGIDFKVGYSPER  165
            L P+  A+ +VG  + P+TIVVYESTVYPG TEEEC+P+LEK SGL  G DF VGYSPER
Sbjct  91   LLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPER  150

Query  166  INPGDREHTFRTIKKVVAAEDEETLDVVAAVYETVVDAGVHRASSIKVAEAAKVIENTQR  225
            INPGD+ HTF TI KVV+++  E L++VA VY +VV AGVH+ASSIKVAEAAKVIENTQR
Sbjct  151  INPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQR  210

Query  226  DLNIALMNELAIIFDRMNIDTLEVLEAAGTKWNFLNFRPGLVGGHCIGVDPFYLTMKSEM  285
            D+NIALMNELAIIFD+++IDT EVL A+GTKWNFLNF+PGLVGGHCIGVDP+YLT K++ 
Sbjct  211  DVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQE  270

Query  286  LGYHPEVILAGRRINETMGRFVATSLIKTMISQNMAILGSRVTVLGMSFKENVSDIRNSK  345
            +G HPEVILAGRRIN+ M++++A+++IK ++ Q + + G+ V VLG++FKEN +D+RN+K
Sbjct  271  VGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTK  330

Query  346  VASLIREVEEFGLEVQVCDPLVDPEEVRREYGIDVKSYCDLKPADVVIYAVSHDEFVQEG  405
            V  +I E+ E+GL+V V D   D +E ++ +G+D+    +LK  DVV++AV+H +++++ 
Sbjct  331  VIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMEN-  389

Query  406  WTIAKRQLKLGR--GIVIDLKGMLDRAMKPEEVHLWRL  441
                K  ++L +  GIV+D+KG+++        +LWRL
Sbjct  390  ---KKDYINLVKDCGIVFDIKGIINSDELNVSQRLWRL  424

228) H045_04675 in NC_020209


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  377 bits (1418),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 222/416 (54%), Positives = 327/416 (79%), Gaps = 2/416 (0%)

Query  8    KLAIIGLGYVGLPLAVEFGKHRTVVGFDINQPRIEALRAGHDATLEVSDEELKQAGKLSF  67
            ++A++GLGYVGLP+AV FG+ + V+GFDIN++RI  L+   D T EV+++ LK++ ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  68   SFNLDELSSCNTFVVTVPTPIDEYNQPDLTPLIKASESIGKVLKKGDLVIYESTVYPGAT  127
            + N ++L   + ++++VPTPID  N+PDL PL+KASE++GKV+  + +V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEDCVPILEKFSGLKFNVDFFAGYSPERINPGDKEHRVTTIKKVTSGSTPEIADLVDALY  187
            EE+CVP+LEK+SGL    DFF GYSPERINPGDK H   TI KV SG T E+ ++V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  NQIIIAGTHKASSIKVAEAAKVIENTQRDlnialinelaiiFNKMGIDTESVLQAAGTKW  247
            + ++ AG HKASSIKVAEAAKVIENTQRD+NIAL+NELAIIF+K++IDT+ VL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDGMGAYVVSQLVKTMVK  307
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND M+ Y+ S+++K ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIHVDGARVLIMGLAFKENCPDLRNTRIVDIVNELKEYNIAVDIYDPWVSPEEANREYG  367
            + ++V+GA V ++GL+FKENCPDLRNT++++I++ELKEY + V + D     +EA++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  ITPIAEPGTDVYDGIVLAVAHNEFKALGAEKIRKFGKSEHVLYDLKYLLSREESDI  423
            +  I      + D +++AV+H+++     + I ++ K   +++D+K +++ +E ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

229) capL in NC_018664


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  377 bits (1418),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 219/428 (52%), Positives = 328/428 (77%), Gaps = 5/428 (1%)

Query  12   EKKIAVVGLGYVGMPLAVSFSKKVKTIGFDINKDKVKKYLNGKDPTNEVGDDEIKSCKVD  71
            +++IAVVGLGYVG+P+AV+F++K K IGFDIN  ++K   N  D TNEV ++ +K+ +++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  72   FTWDENKLKEVNFIVIAVPTPINHDKTPDLTPLIEASKLVGRNLTKGSIVVYESTVFPGV  131
            +T + + LK  +FI+IAVPTPI+ ++ PDL PL+ AS  VG+ +T ++IVVYESTV+PG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  132  TEDICIPTIEAESGLECGRDFKVGYSPERINPGDKVNRLENIVKIVSGIDDESMETIAQV  191
            TE+ C+P +E  SGL CG+DF VGYSPERINPGDKV+ +E I K+VSG   E +E +A+V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  192  YEMIIEAGVHRAKSIKVAEAAKLVENTQRDINIAFMNELAIVFEKMDINTSEVIDAMNTK  251
            Y  ++ AGVH+A SIKVAEAAK++ENTQRD+NIA+MNELAI+F+K+DI+T+EV+ A  TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  252  WNALGFTPGLVGGHCIGVDPYYFIYQAEKLGYHSQIILSGRKINDDMGNFIADISIKNMI  311
            WN L F PGLVGGHCIGVDPYY+  +A+ +G H+++IL+GR+IND+M+++IA   IK+++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  312  KAKIAVNEANIYILGITFKENCSDIRNSKVLDIINRFKEYdvdvkvvdpvadaEEIKQFY  371
            K  + V+ A + +LG+TFKENC+D+RN+KV++II+ +KEY+++V V D  AD +E K+F+
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  372  NIDLVNLDKVKDADCIIFAVSHDEFKELSIKEIKNMYRNDLNAKKTLIDVKSIFKKQDMN  431
             +DL++   +K  D ++FAV+H ++      E K+ Y N ++    ++D+K+I++ +++N
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDY-----MENKKDYINLVKDCGIVFDIKGIINSDELN  416

Query  432  EDFIYWSL  439
                 W L
Sbjct  417  VSQRLWRL  424

230) Dfer_4788 in NC_013037


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  377 bits (1418),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 209/411 (51%), Positives = 317/411 (78%), Gaps = 4/411 (0%)

Query  8    RIAVIGLGYVGLPLAVAFSRRYAVTGFDINKRRIQELKDAYDTTKEISRQDLREAANLTF  67
             IAV+GLGYVGLP+AV+F+ +  V GFDIN  RI+ELK+ YD T+E++ + L+++ N+ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  68   SWDEATLKACQVFIVTVPTPVDHYKKPNLTYLLKASAMIGQVLKKGDLVIYESTVYPGCT  127
            + +   LK  + +I++VPTP+D  +KP+L  LLKAS  +G+V+  + +V+YESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EDDCVPVLERESGLKFNEDFFCGYSPERINPGDKVNTFTKIKKVTSGSTPEIARIVDELY  187
            E++CVPVLE+ SGL    DFF GYSPERINPGDKV+TF  I KV SG T E+  IV ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  ASVIEAGTHRASSIKVAEASKAIENAQRDVNISFVNELALIFDRMNIDTTEVLEAAATKW  247
            +SV+ AG H+ASSIKVAEA+K IEN+QRDVNI+++NELA+IFD+++IDT EVL A++TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLQYKPGLVGGHCIGVDPYYLAYKAESLGYYPQVILSGRRVNDMMGVFVANKLVKLMIR  307
            NFL++KPGLVGGHCIGVDPYYL+ KA+ +G  P+VIL+GRR+ND M+ ++A++++K +++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KGHKIEGSRVLVLGITFKENCPDIRNTRVIDVYRELTDFGMQVEVHDPWASGEQVLAEYD  367
            +G  ++G+ V VLG+TFKENCPD+RNT+VI++  EL ++G++V V+D  A  ++    ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IALLDKPSGRYEAVIL-AVAHQEF--RSIEFSEFTAADSVIFDLKSVLPQE  415
            + L+D    +   V+L AV+H+++     ++ ++    +++FD+K+++  +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

231) capL in NC_014640


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  377 bits (1417),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 224/425 (53%), Positives = 313/425 (74%), Gaps = 1/425 (0%)

Query  1    MVKRIAVCGLGYVGLPVAVAFSKRFDVIGFDVDKRRIARLKEGDDWTGEIERDVLLASPM  60
            M + IAV GLGYVGLPVAV+F+++  VIGFD++  RI  LK+  D+T E+  + L  + +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  61   QFTDQVSELENCDFFVVAVPTPVDEKNNPDFSLLVRACRSIGPVLRPGCIVVFESTVHPG  120
            ++T +  +L + DF+++AVPTP+D  N+PD+  L++A  ++G V+ P+ IVV+ESTV PG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  121  ATEEICGPELEKISGLRCGVDFKLGYSPERINPGDREHPLEKIVKIVSGQDEESLEIIAG  180
            ATEE C P LEK SGL CG DF +GYSPERINPGD+ H +E I K+VSGQ  E LEI+A+
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  181  VYEKIIDAGVHRASSIKVAEAAKVLENTQRDINIALMNEMSKICDLVGIRTSEVLAAAGT  240
            VY  ++ AGVH+ASSIKVAEAAKV+ENTQRD+NIALMNE++ I D ++I T+EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  241  KWNFLKFSPGLVGGHCIGVDPYYLTSKAQELGYHPEVILSGRRINDGMASHVASRVVQTL  300
            KWNFL+F PGLVGGHCIGVDPYYLT KAQE+G HPEVIL+GRRIND MA  +AS V++ L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  301  ARNGRLNATTRVGILGMTFKENVPDIRNSKVVDLYKALGAYGITPVACDPMVDPEQMEHE  360
             ++G     + V +LG+TFKEN PD+RN+KV+++   L  YG+     D   D ++    
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  361  YGIKLVERDQFRDMDVLILAVPHRETMDSIWDDMPALVKSGGMVCDLKSVLDSKRLQSDL  420
            +G+ L++  +++ +DV+++AVPH++ M++   D   LVK  G+V D+K++++S  L+   
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMEN-KKDYINLVKDCGIVFDIKGIINSDELNVSQ  419

Query  421  LYWTL  425
              W L
Sbjct  420  RLWRL  424

232) LHK_02806 in NC_012559


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  377 bits (1416),  Expect = 7e-106, Method: Compositional matrix adjust.
 Identities = 227/386 (59%), Positives = 310/386 (81%), Gaps = 5/386 (1%)

Query  6    KIAIIGLGYVGLPLAVEFGKSRSVVGFDINEARIAELRTGKDSTLEVTPDDLSAARKLQY  65
            +IA++GLGYVGLP+AV FG+ + V+GFDINE+RI EL+   D T EVT + L  + +++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  66   SSERSKLEECGIFIVTVPTPIDKANRPDLTPLIKASETVGRVMKSGAIVIYESTVYPGCT  125
            +S+   L   +++I++VPTPIDK N+PDL PL+KASETVG+V+ +++IV+YESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  126  EEVCVPILEKYSGLKFNKDFFCGYSPERINPGDkintltkikkitSGSTPEIAKVVDQLY  185
            EE CVP+LEKYSGL   KDFF GYSPERINPGDK++T+  I K+ SG T E+  +V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  186  GSIISAGTFPATCIKVAEAAKVIENTQRDLNIALVNELSVIFDRLGIDTIEVLNAAGSKW  245
            +S+++AG   A+ IKVAEAAKVIENTQRD+NIAL+NEL++IFD+L+IDT EVL+A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  246  NFLPFRPGMVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYAARNVIRLMLK  305
            NFL F+PG+VGGHCIGVDPYYLTHKA+EVG HP+VILAGRRINDNMA+Y A NVI+ +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  306  NGIDVARSTVGVQGITFKENCPDIRNSKVADLVRELEHWGAKVVVADPWANSDEV--FYE  363
            +G++V  +TV V G+TFKENCPD+RN+KV +++ EL + G +V V D  A+ +E   F  
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF--  360

Query  364  YGIRLGTINQENPVDALIVAVGHNEF  389
            +G+ L   ++ + VD ++ AV H+++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDY  386

233) ABLL_2295 in NC_017192


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  377 bits (1416),  Expect = 7e-106, Method: Compositional matrix adjust.
 Identities = 225/430 (53%), Positives = 326/430 (76%), Gaps = 14/430 (3%)

Query  1    MNKKICIIGLGYVGLPLAHAFSKKYKVVGFDINKPRVEELSNGYDRTLELTKEEVQESIS  60
            MN++I ++GLGYVGLP+A +F++K KV+GFDIN +R+ EL N YDRT E+T + ++++  
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT--  58

Query  61   NGMIYTTNIEEIEDCNVYIVTVPTPIDSSNRPDLTPLIKSSQTIGKVLKRDDIVIYESTV  120
              + YT+N E++   +  I++VPTPID  N+PDL PL+K+S+T+GKV+  D IV+YESTV
Sbjct  59   -NIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTV  117

Query  121  YPGVTEEVCVPQLENISGLKFNQDFYCGYSPERINPGDKEHTVTKILKITSGSTPKIADV  180
            YPG TEE CVP LE+ SGL   +DF+ GYSPERINPGDK HT   I K+ SG T  + ++
Sbjct  118  YPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEI  177

Query  181  VDELYNSIIVAGTHKASSIKVAEAAKVIENTQRDVNIALINELALIFDTMNIDTNDVIEA  240
            V ++Y+S++ AG HKASSIKVAEAAKVIENTQRDVNIAL+NELA+IFD ++IDTN+V+ A
Sbjct  178  VADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKA  237

Query  241  AATKWNFIKLKPGLVGGHCIGVDPYYLTYKSEELGYKPNLILGARQINNAMGKYIADKTI  300
            ++TKWNF+++KPGLVGGHCIGVDPYYLT K++E+G  P++IL++R+IN+ M+KYIA + I
Sbjct  238  SGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVI  297

Query  301  KLMIKSGKIIKNSNVLMMGLTFKENCPDIRNTKVVDIIEELEDFGAIIDVYEPWIDEKD-  359
            K ++K G  ++ + V ++GLTFKENCPD+RNTKV++IIEEL ++G  + V +   D ++ 
Sbjct  298  KELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEA  357

Query  360  KGYYDYNFVENPFENEKKYDAIVVAVGHNLFKTITEEEYNNLIKGEKIVIDVKGI-----  414
            K +++ ++++    + K  D ++ AV H+ +      +Y NL+K+  IV+D+KGI     
Sbjct  358  KKFFGLDLIDT--KELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDE  414

Query  415  --VPNPTWKL  422
              V++  W+L
Sbjct  415  LNVSQRLWRL  424

234) wbpO in NC_016001


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  376 bits (1412),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 227/419 (55%), Positives = 321/419 (77%), Gaps = 11/419 (2%)

Query  1    MSIKIAVIGLGYVGLPLARLFAKQYPVVGFDINKKRINELNSGHDSTLEISNELLQSVLV  60
            M+ +IAV+GLGYVGLP+A  F+++  V+GFDIN  RI+EL++  D T E++++ L++   
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN---  57

Query  61   TTFSSPTGLLCSSDLDDIKDCNYYIITVPTPVDKNNRPDLTPLYKSSETVGKVLKKGDIV  120
                  T +  +S+ +D+K  ++ II+VPTP+DK+N+PDL PL K+SETVGKV+  + IV
Sbjct  58   ------TNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIV  111

Query  121  IYESTVYPGVTEEECVPVLEKISGLKFNQDFHAGYSPERINPGDKEHTVEKILKVTSGST  180
            +YESTVYPG TEEECVPVLEK SGL   +DF  GYSPERINPGDK HT E I KV SG T
Sbjct  112  VYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQT  171

Query  181  PEIGLKVDALYRSVIVAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNMMEIDT  240
             E+   V  +Y SV+ AG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF+ ++IDT
Sbjct  172  LEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDT  231

Query  241  HSVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKSQESGYHPEIILAGRRLNDGMGEF  300
            + VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++K+QE G HPE+ILAGRR+ND M+ +
Sbjct  232  NEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKY  291

Query  301  IATVVVKLMIKKGIFVKNAKLLMLGFTFKENCPDVRNTKIIDVVRALEDFEIDITIHDPW  360
            IA+ V+K ++K+G+ V+ A + +LG+TFKENCPD+RNTK+I+++  L ++ +++T++D  
Sbjct  292  IASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVE  351

Query  361  ANPDEVKHEYDLEMTKDLPNEKFDAIILGVSHKEFADI--DYNSLKKDNAILFDVKGIL  417
            A+ +E K  ++L++         D ++++V+HK++ +   DY +L KD +I+FD+KGI+
Sbjct  352  ADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGII  410

235) Mlg_0796 in NC_008340


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  376 bits (1413),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 223/416 (54%), Positives = 320/416 (77%), Gaps = 2/416 (0%)

Query  22   RIAVIGLGYVGLPLAVALAERYPVVGFDIDTRRVIELRQGQDHTREVAPEALQAAEQLSY  81
             IAV+GLGYVGLP+AV+++++  V+GFDI+  R+ EL++  D+T EV+ + L+ ++ + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  82   SDDIESLLGCNVYIVTVPTPIDAHRRPDLQPLRSASQTvgrvlgrgdvvvYESTVYPGAT  141
            + + E L   +  I++VPTPID H +PDL PL  AS+TVG+V+  + +VVYESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  142  EEECVPVLERASGLRFNQDFYVGYSPERINPGDKAHTVRDIVKVTAGSTPEVAEYLDQLY  201
            EEECVPVLE+ SGL   +DF+VGYSPERINPGDK HT   I KV +G T EV E + ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  202  ASVITAGTHKAGSIREAEAAKVIENTQRDVNIALINELAMLFNRMGLDTEEVLRAAGTKW  261
            +SV+TAG HKA+SI+ AEAAKVIENTQRDVNIAL+NELA++F+++++DT+EVL+A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  262  NFLPFRPGLVGGHCIGVDPYYLTHKAQALGHHPEMILAGRRINDGMGAYVADQLLRLMAQ  321
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +GHHPE+ILAGRRIND M+ Y+A ++++ + +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  322  RHIPVPGARILVLGLTFKENCPDLRNTRVVDIVRCLEDYQAQVDVFDPWVDSGEARDEYA  381
            + + V GA + VLGLTFKENCPDLRNT+V++I+  L +Y  +V V D   D  EA+  ++
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  382  IEPIGEPGSAQYDAVLLAVAHREFVELGAEILRGWLRSGGVLYDLKSALPREAVDA  437
            ++ I+       D VL+AV+H++++E   + +   ++  G+++D+K+ +  + ++ 
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNV  417

236) BDI_0027 in NC_009615


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  376 bits (1414),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 224/417 (54%), Positives = 322/417 (78%), Gaps = 6/417 (1%)

Query  5    KICVVGLGYVGLPLARLFSTKYPTVGFDMNQARVNALMKGHDATLEVADDLLQDAINNHG  64
            +I VVGLGYVGLP+A  F+ K   +GFD+N++R++ L +  D T EV+++ L+++     
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT----N  59

Query  65   FKCTTDIEQIRDCNFYIVAVPTPVDENNNPDLTPLYGASTTVGKVISKGDIVVYESTVYP  124
            +  T++ E+++  +F I+AVPTP+D +N+PDL PL  AS TVGKVI+ + IVVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  125  GVTEDECIPVVEKVSGLKYNEDFFAGYSPERINPGDKLHTVEKIKKVTSGSTVEIGKKVN  184
            G TE+EC+PV+EK SGL    DFF GYSPERINPGDK+HT E I KV SG T+E+   V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  185  EVYASVITAGTHLASTIKVAEAAKVIENSQRDINIAFVNELSKIFTKMGIDTQDVLEAAS  244
            +VY+SV+TAG H AS+IKVAEAAKVIEN+QRD+NIA++NEL+ IF K++IDT++VL A++
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  245  TKWNFLPFKPGLVGGHCIGVDPYYLARCAQRHGYNPEIILAGRRMNDGMGEYVANEVVKL  304
            TKWNFL FKPGLVGGHCIGVDPYYL++ AQ  G +PE+ILAGRR+ND M+ Y+A++V+K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  305  MLKKGIQVLGANILILGFTFKENCPDVRNTKVIDIYNALREYNVNITIYDPWANPAIVEH  364
            +LK+G++V GA + +LG+TFKENCPD+RNTKVI+I + L+EY +N+T+ D  A+      
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  365  EYGIKVTNQLPMKKYDTAILAVAHKEFTEL--DILSMLNDNHIIYDVKGFLDKQIVN  419
             +G+ + +   +K  D  ++AV+HK++ E   D +++++D  I++D+KG+++ + +N
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELN  416

237) Daes_0799 in NC_014844


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  376 bits (1414),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 225/428 (53%), Positives = 320/428 (75%), Gaps = 9/428 (2%)

Query  15   TIAVVGLGYVGLPLAVALGRHFRVIGVDVSDKRVRELVRRHDRTGEVDFSTVTDDVDLIF  74
             IAVVGLGYVGLP+AV++G   +VIG D+++ R++EL    DRT EV  + + +  ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  75   TSDLSNLASARLILVAVPTPIDEYRSPDLRPVTGASESVGTYLQPGSVVVYESTVFPGLT  134
            TS+  +L  A +I++AVPTPID    PDL P+  ASE+VG  + P+++VVYESTV+PG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  135  EDICVPILEDRSGLVCGRDFCVGYSPERINPGDKVHRLETIVKVVAGQDEATGRLLQAVY  194
            E+ CVP+LE  SGLVCG+DF VGYSPERINPGDKVH +ETI KVV+GQ      ++  VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  195  GIVVEAGTHLAADIRTAEAAKVIENTQRDLNIALMNELAMIFDRMGIDTLDVLEAAGTKW  254
            + VV AG H A+ I+ AEAAKVIENTQRD+NIALMNELA+IFD+++IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  255  NFLPFRPGLVGGHCIGVDPYYLTFKAEAMGFHPQVILAGRQTNDSMGKFIAEAAVKRLIR  314
            NFL F+PGLVGGHCIGVDPYYLT KA+ +G HP+VILAGR+ ND+M+K+IA   +K L++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  315  ADVKIKGARVGVLGVTFKENVPDLRNTRVVDILAELADYGMVTLIHDAMADPEEARHELG  374
             ++ ++GA V VLG+TFKEN PDLRNT+V++I+ EL +YG+   ++D  AD +EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  375  IELCALDAMRDLDALVLAVSHDQYRDIPLAEIKEWFADPAR--ALVVDVKGFFDRAELEA  432
            ++L     ++ +D +++AV+H +Y    + + K+ + +  +  ++V D+KG+++  EL+ 
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY----MENKKD-YINLVKDCGIVFDIKGIINSDELN-  416

Query  433  LDITYWRL  440
            +    WRL
Sbjct  417  VSQRLWRL  424

238) Solca_4312 in NC_017770


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  376 bits (1413),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 217/420 (52%), Positives = 326/420 (78%), Gaps = 12/420 (2%)

Query  7    KIAIVGLGYVGLPLAIEFAKKYSVLGYDINQTRVEELSNGIDRTLEANIEDLNETILKGK  66
            +IA+VGLGYVGLP+A+ F++K  V+G+DIN++R+ EL N  DRT E   + L++T     
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-----  58

Query  67   TSHVGIKFSSNIDDLKSNNIYILTVPTPIDQFNAPDLEPLLKASSMVGKILKRGDIVIYE  126
                 I ++SN +DLK  ++ I++VPTPID+ N PDL PLLKAS  VGK++  + IV+YE
Sbjct  59   ----NIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  127  STVYPGCTEEDCVPVLEKESGLIYNVDFYCGYSPERINPGDKINTLTKIKKVTSGSTAEI  186
            STVYPG TEE+CVPVLEK SGL+   DF+ GYSPERINPGDK++T+  I KV SG T E+
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  187  ANKVDDLYGSIITVGTHKAASIKVAEASKAIENAQRDVNISFVNELSLIFDRIGIDTNDV  246
             + V D+Y+S++T G HKA+SIKVAEA+K IEN+QRDVNI+++NEL++IFD+++IDTN+V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  247  IEAAGTKWNFLKYKPGLVGGHCIGVDPYYLAHKAQQLGYHPQVILSGRRVNNMMGQFVAN  306
            + A+GTKWNFL++KPGLVGGHCIGVDPYYL+HKAQ++G HP+VIL+GRR+N+ M++++A+
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  307  KVIKLMIEKDHKIKGSKALIMGITFKENCPDVRNTKVVDIYNELVQYGLSVDIYDPWADK  366
            +VIK ++ ++  ++G+   ++G+TFKENCPD+RNTKV++I +EL +YGL+V + D  ADK
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  367  EEVKHEYGLQINNELDNDINYQAIVVAVAHDEF--KTVCFKRFKDQNAVIFDTKAFLDRE  424
            +E K  +GL++ +  +  +  + ++ AV+H ++  +   +  +  + +++FD K++++ +
Sbjct  355  NEAKKFFGLDLIDTKELKMV-DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

239) vipA in NC_014145


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  376 bits (1415),  Expect = 8e-106, Method: Compositional matrix adjust.
 Identities = 238/407 (59%), Positives = 316/407 (78%), Gaps = 3/407 (0%)

Query  20   FGKKYRTIGFDLSVEKIAAYCKHVDPTGEVSQESLKQATLLEPTTDASKLKEADFVIVAV  79
            FG+K + IGFD++  +I    ++ D T EV+++ LK++ + E T++A  LK ADF+I+AV
Sbjct  21   FGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EYTSNAEDLKKADFIIIAV  79

Query  80   PTPVDDAHNPDFSPLVGASTSVGKYLKPGAIVVYESTVYPGATEEICVPILEKQSGLKWK  139
            PTP+D  ++PD+ PL+ AS +VGK + P++IVVYESTVYPGATEE CVP+LEK SGL   
Sbjct  80   PTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCG  139

Query  140  KDFFVGYSPERINPGDKEHTLTRIVKVVSGDTPETLETVANVYASVITAGVHRAESIKVA  199
            KDFFVGYSPERINPGDK HT+  I KVVSG+T E LE VA+VY+SV+TAGVH+A SIKVA
Sbjct  140  KDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVA  199

Query  200  EAAKVIENTQRDLNIALMNELSLIFHRIGIDTLDVLKAAGTKWNFLPFRPGLVGGHCIGV  259
            EAAKVIENTQRD+NIALMNEL++IF++++IDT +VLKA+GTKWNFL F+PGLVGGHCIGV
Sbjct  200  EAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGV  259

Query  260  DPYYLTHKADMLGYHPQVILAGRRINDGMGKYIAEQTIKQMSQAGLPIKGSDVIVLGLTF  319
            DPYYLTHKA+ +G HP+VILAGRRIND M+KYIA + IK++ + GL ++G+ V VLGLTF
Sbjct  260  DPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTF  319

Query  320  KENCPDLRNSKVIDVIRELASYGVNVIVHDPIADADEAVHEYGVTLTPWAELPRaqaiva  379
            KENCPDLRN+KVI++I EL  YG+NV V+D  AD +EA   +G+ L    EL   + ++ 
Sbjct  320  KENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLF  379

Query  380  avahqaYKDMSVAETLEKLLPSGIFMDIKCQYDAAALQSHGAQVWRL  426
            AV+H+ Y +    + ++ +   GI  DIK   ++  L+  + ++WRL
Sbjct  380  AVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNV-SQRLWRL  424

240) wbpO in NC_014366


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  376 bits (1415),  Expect = 8e-106, Method: Compositional matrix adjust.
 Identities = 231/418 (56%), Positives = 329/418 (79%), Gaps = 3/418 (0%)

Query  6    DSSVAIIGLGYVGLPLAVAFGSKRKTVGFDVNQARIRDLAAGIDATLEVSGDELASATQL  65
            + ++A++GLGYVGLP+AV+FG+K+K +GFD+N++RI++L    D T EV+ + L   T++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNI  60

Query  66   SFSHDLNDLRACNVFIVTVPTPIDDHKRPDLTPLIKASETLGKVIKHGDVVVYESTVYPG  125
             ++ + +DL+  + +I++VPTPID H++PDL PL+KASET+GKVI  + +VVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  126  ATEEVCIPVIEKLSGLRFNQDFFAGYSPERINPGDKEHRVHSIVKVTSGSTPEIADFVDA  185
            ATEE C+PV+EK SGL   +DFF GYSPERINPGDK H  ++I KV SG T E+ ++V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  186  LYRTIVLAGTHRASSIKVAEAAKVIENTQRDlnialinelaiiFGKLGIDTLEVLEAAGS  245
            +Y ++V AG H+ASSIKVAEAAKVIENTQRD+NIAL+NELAIIF+KL+IDT EVL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  246  KWNFLPFRPGLVGGHCISVDPYYLTYKAQEIGYHPEVILAGRRINDNMGQYVTDQVVKLM  305
            KWNFL F+PGLVGGHCI+VDPYYLT KAQE+G HPEVILAGRRINDNM++Y++ +V+K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  306  TRKRIHVVDANILILGLTFKENCPDLRNTRVVDIVRELEEYHAKIDIFDPWANREEAHHE  365
             ++ ++V +A + +LGLTFKENCPDLRNT+V++I+ EL EY  ++ + D  A+++EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  366  YGYTLLESLPEDKRYDAVILTVGHKQFREMGAEGIKKLCAESHVIYDVKYILPKDAVD  423
            +G  L+++  E K  D V+++V HK++ E   + I +L  +  +++D+K I+  D ++
Sbjct  361  FGLDLIDT-KELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

241) Dvul_0210 in NC_008751


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1410),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 231/405 (58%), Positives = 306/405 (76%), Gaps = 8/405 (1%)

Query  38   RVIGFDIQQNRVDELSSGHDRTGEVDDASLAATPALFTTDAARLGEAGVIIVAVPTPIDN  97
            +VIGFDI+++R+ EL +  DRT EV +  L  T   +T++A  L  A+ II+AVPTPID+
Sbjct  26   KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIAVPTPIDK  85

Query  98   HRNPDLGPVEKSSITVGRHMKAGCVVVYESTVYPGVTEEVCVPILERESGLVFGRDFTVG  157
            H +PDL P+ K+S TVG+ + ++ +VVYESTVYPG TEE CVP+LE+ SGLV G+DF VG
Sbjct  86   HNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVG  145

Query  158  YSPERINPGDKVHTLETIMKIVSGSDAATADLLEKVYGSVVTAGIHKAASIKVAEAAKVI  217
            YSPERINPGDKVHT+ETI K+VSG      +++  VY+SVVTAG+HKA+SIKVAEAAKVI
Sbjct  146  YSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVI  205

Query  218  ENTQRDLNIALMNELSIIFDRLGIDTLEVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLT  277
            ENTQRD+NIALMNEL+IIFD+L+IDT EVL A+GTKWNFL F+PGLVGGHCIGVDPYYLT
Sbjct  206  ENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLT  265

Query  278  FKAEELGYHPQVILAGRRINDGMGKHVAEMTVKRMIRSGCRVAGARVGVLGLTFKENVPD  337
             KA+E+G HP+VILAGRRIND M+K +A   +K +++ G  V GA V VLGLTFKEN PD
Sbjct  266  HKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPD  325

Query  338  LRNTRVIDVVRELEEYGVTVLVHDPFADPAEAMHEYGLTLAHLKDFQQLDALVVTVPHDV  397
            LRNT+VI+++ EL EYG+ V V+D  AD  EA   +GL L + K+++ +D ++ +VPH  
Sbjct  326  LRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKD  385

Query  398  YRA--MDLVQVRRWCASSGTPPLLDVRGTFNPGTAREAGFDYWRL  440
            Y     D +++ + C+      ++D++G +N++    +    WRL
Sbjct  386  YMENKKDYINLVKDCGI-----VFDIKGIINSDELNVSQ-RLWRL  424

242) DVU3176 in NC_002937


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1410),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 231/405 (58%), Positives = 306/405 (76%), Gaps = 8/405 (1%)

Query  38   RVIGFDIQQNRVDELSSGHDRTGEVDDASLAATPALFTTDAARLGEAGVIIVAVPTPIDN  97
            +VIGFDI+++R+ EL +  DRT EV +  L  T   +T++A  L  A+ II+AVPTPID+
Sbjct  26   KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIAVPTPIDK  85

Query  98   HRNPDLGPVEKSSITVGRHMKAGCVVVYESTVYPGVTEEVCVPILERESGLVFGRDFTVG  157
            H +PDL P+ K+S TVG+ + ++ +VVYESTVYPG TEE CVP+LE+ SGLV G+DF VG
Sbjct  86   HNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVG  145

Query  158  YSPERINPGDKVHTLETIMKIVSGSDAATADLLEKVYGSVVTAGIHKAASIKVAEAAKVI  217
            YSPERINPGDKVHT+ETI K+VSG      +++  VY+SVVTAG+HKA+SIKVAEAAKVI
Sbjct  146  YSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVI  205

Query  218  ENTQRDLNIALMNELSIIFDRLGIDTLEVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLT  277
            ENTQRD+NIALMNEL+IIFD+L+IDT EVL A+GTKWNFL F+PGLVGGHCIGVDPYYLT
Sbjct  206  ENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLT  265

Query  278  FKAEELGYHPQVILAGRRINDGMGKHVAEMTVKRMIRSGCRVAGARVGVLGLTFKENVPD  337
             KA+E+G HP+VILAGRRIND M+K +A   +K +++ G  V GA V VLGLTFKEN PD
Sbjct  266  HKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPD  325

Query  338  LRNTRVIDVVRELEEYGVTVLVHDPFADPAEAMHEYGLTLAHLKDFQQLDALVVTVPHDV  397
            LRNT+VI+++ EL EYG+ V V+D  AD  EA   +GL L + K+++ +D ++ +VPH  
Sbjct  326  LRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKD  385

Query  398  YRA--MDLVQVRRWCASSGTPPLLDVRGTFNPGTAREAGFDYWRL  440
            Y     D +++ + C+      ++D++G +N++    +    WRL
Sbjct  386  YMENKKDYINLVKDCGI-----VFDIKGIINSDELNVSQ-RLWRL  424

243) Deval_2933 in NC_017310


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1410),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 231/405 (58%), Positives = 306/405 (76%), Gaps = 8/405 (1%)

Query  38   RVIGFDIQQNRVDELSSGHDRTGEVDDASLAATPALFTTDAARLGEAGVIIVAVPTPIDN  97
            +VIGFDI+++R+ EL +  DRT EV +  L  T   +T++A  L  A+ II+AVPTPID+
Sbjct  26   KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIAVPTPIDK  85

Query  98   HRNPDLGPVEKSSITVGRHMKAGCVVVYESTVYPGVTEEVCVPILERESGLVFGRDFTVG  157
            H +PDL P+ K+S TVG+ + ++ +VVYESTVYPG TEE CVP+LE+ SGLV G+DF VG
Sbjct  86   HNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVG  145

Query  158  YSPERINPGDKVHTLETIMKIVSGSDAATADLLEKVYGSVVTAGIHKAASIKVAEAAKVI  217
            YSPERINPGDKVHT+ETI K+VSG      +++  VY+SVVTAG+HKA+SIKVAEAAKVI
Sbjct  146  YSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVI  205

Query  218  ENTQRDLNIALMNELSIIFDRLGIDTLEVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLT  277
            ENTQRD+NIALMNEL+IIFD+L+IDT EVL A+GTKWNFL F+PGLVGGHCIGVDPYYLT
Sbjct  206  ENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLT  265

Query  278  FKAEELGYHPQVILAGRRINDGMGKHVAEMTVKRMIRSGCRVAGARVGVLGLTFKENVPD  337
             KA+E+G HP+VILAGRRIND M+K +A   +K +++ G  V GA V VLGLTFKEN PD
Sbjct  266  HKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPD  325

Query  338  LRNTRVIDVVRELEEYGVTVLVHDPFADPAEAMHEYGLTLAHLKDFQQLDALVVTVPHDV  397
            LRNT+VI+++ EL EYG+ V V+D  AD  EA   +GL L + K+++ +D ++ +VPH  
Sbjct  326  LRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKD  385

Query  398  YRA--MDLVQVRRWCASSGTPPLLDVRGTFNPGTAREAGFDYWRL  440
            Y     D +++ + C+      ++D++G +N++    +    WRL
Sbjct  386  YMENKKDYINLVKDCGI-----VFDIKGIINSDELNVSQ-RLWRL  424

244) wecC in NC_008255


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1411),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 241/424 (57%), Positives = 320/424 (76%), Gaps = 4/424 (0%)

Query  12   NQTLAVIGLGYVGLPIALAFAKKVKVIGFDINSKRIDIMKKNIDPSGELRESDFLNSDIF  71
            N+ +AV+GLGYVGLP+A++F++K KVIGFDIN  RI  +K+N D + E+ E+ + N++I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  72   FTAELSDLKKASFYIVTVPTPIDEFNHPDLAPLVSATRTIAKVLKQGDYVVYESTVYPGC  131
            +T++  DLKKA F I++VPTPID  N PDL PL+ A+ T++KV+  +  VVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  132  TEEECIPLLEELSGLVCGKDFKVGYSPERINPGDKEHTLAKITKVVAGCDAESLDIIAQT  191
            TEEEC+P+LE  SGLVCGKDF VGYSPERINPGDK HT+  ITKVV+G   E L+I+A+ 
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  192  YEIVVDAGIHKASSIKVAEAAKIIENTQRDVNIALMNELSVICDKLNINTLEVLEAASTK  251
            Y  VV AG+HKASSIKVAEAAK+IENTQRDVNIALMNEL++I DKL+I+T EVL A++TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  252  WNFLPFTPGLVGGHCIGVDPYYLTYKARKLGLNPNVILSGRLINDQMPMNIAKKIVKSLI  311
            WNFL F PGLVGGHCIGVDPYYLT KA+ +G +P+VIL+GR IND+M+  IA +++K L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  312  KSGTDISKGRVLVLGVTFKENVEDIRNSKVAELIKELQSYSLQVDAVDPYASFQEFKHEY  371
            K G ++  + V VLG+TFKEN  D+RN+KV ++I EL+ Y+L+V   D  A  +E K  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  372  NLDF-STEITGTYDVVILAVSHKEYQKLNIEYFENLLTEKGIFVDIKGLYRKQ--NHRNS  428
             LD+  T      DVV++AV+HK+Y   + +Y+ NL+ + GI  DIKG+   +  N  + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNVSQR  420

Query  429  YWTL  432
             W L
Sbjct  421  LWRL  424

245) Noc_2637 in NC_007484


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1411),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 223/417 (54%), Positives = 321/417 (77%), Gaps = 6/417 (1%)

Query  8    RVGILGLGYVGLPLAVEFGKKFPTMGFDINPRRIAELKEGRDSTLEVEPELLAATTQLQY  67
             ++++GLGYVGLP+AV FG+K   +GFDIN  RI ELK+  D T EV  + L   T+++Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-NTNIEY  62

Query  68   THQAQDLIDCNVYIITVPTPIDEYKRPDLRPLESASHTVGKVLKRGNIAIFESTVYPGAT  127
            T +A+DL   +  II+VPTPID  ++PDL PL  AS+TVGKV+  + I ++ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEICVPILERESGLTYNQEFFAGYSPERINPGDKQHRVASICKVISASTVEATELVDEIY  187
            EE CVP+LE+ SGL   ++FF GYSPERINPGDK H   +I KV+S+ T+E  E+V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  ASIITAGTHKANSIRVAEAAKVIENTQRDVNIALINELAMLFNQLGIDTQEVLEAAATKW  247
            +S++TAG HKA+SI+VAEAAKVIENTQRDVNIAL+NELA++F++L+IDT+EVL A++TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGIDPYYLTHKAQAIGFQPEMILAGRRVNDGMGSYVASQIVKLMTQ  307
            NFL F+PGLVGGHCIG+DPYYLTHKAQ +G +PE+ILAGRR+ND M+ Y+AS+++K + +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  RRIHVVDSRILILGLAFKENCPDLRNTRVMDIIAELKNYHAQIDIYDPWIDAKEARQEHG  367
            + ++V ++ + +LGL+FKENCPDLRNT+V++II ELK+Y  ++ + D   D +EA++  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  ITLV--TDLRDGYYDAIIVAVAHRQFAELKAAGIRALGKPRSILYDVKHLLPKEAVD  422
            + L+   +L+    D ++ AV+H+++ E K   I  L K  +I++D+K ++  + ++
Sbjct  363  LDLIDTKELKMV--DVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

246) B739_1127 in NC_018609


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1410),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 228/426 (54%), Positives = 321/426 (76%), Gaps = 14/426 (3%)

Query  1    MKKRIAIIGLGYVGLPLARLFATKYSVIGFDINQNRVERLNQGKDDTLEVPDDILQAVLL  60
            M++ IA++GLGYVGLP+A  F+ K  VIGFDIN++R+  L++  D T EV ++ L     
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-----  55

Query  61   KENPIFTKREGLYCSSDIKDIQEANVYIITVPTPVDKNNRPVLIPLIKASETVGKVLKKG  120
                   K   +  +S+  D++ A+  II+VPTP+DK+N+P L+PL+KASETVGKV+  +
Sbjct  56   -------KNTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPD  108

Query  121  DVVIYESTVYPGATEEDCVPVLEKVSGLKFNEDFFAGYSPERINPGDKEHTVEKILKVTS  180
             +V+YESTVYPGATEE+CVPVLEK SGL    DFF GYSPERINPGDK HT E I KV S
Sbjct  109  TIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVS  168

Query  181  GSTPEVGIIVDELYKSVITAGTHLAPTIRVAEAAKVIENSQRDINIAFVNELAKIFNLMN  240
            G T EV  IV ++Y SV+TAG H A++I+VAEAAKVIEN+QRD+NIA++NELA IF+ ++
Sbjct  169  GQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLD  228

Query  241  IDTHAVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSM  300
            IDT+ VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M
Sbjct  229  IDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNM  288

Query  301  GKYVAEQVIKAMIKKDIPVNNAEVLMLGITFKENCPDVRNTKIVDVIAALEDFGVKVTTY  360
            +KY+A +VIK ++K+++ V+ A V +LG+TFKENCPD+RNTK++++I  L ++G++VT  
Sbjct  289  AKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVN  348

Query  361  DPWANPEEVQHEYGIESTKKLPSQKFDTVVLGVAHKEFKAL--DLSSLKRSKAVVYDVKG  418
            D  A+ +E +  +G++       +  D V+++V+HK++     D  +L +  ++V+D+KG
Sbjct  349  DVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKG  408

Query  419  VLGNSD  424
            ++ + +
Sbjct  409  IINSDE  414

247) M5M_08915 in NC_018868


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1410),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 225/417 (54%), Positives = 314/417 (76%), Gaps = 2/417 (0%)

Query  5    SPSVCVIGLGYVGLPLAVEFGKQVNTLGFDIHQRRITELNAGKDHTlelssaelaaaTHI  64
            + ++ V+GLGYVGLP+AV FG++ + +GFDI++ RI EL+   D+T E++   L   T+I
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNI  60

Query  65   RYTANEEEIKACDVYIVTVPTPITDAKQPDLTPLQKASELLGRVIGKNSIVVFESTVYPG  124
             YT+N E++K  D  I++VPTPI   ++PDL PL KASE +G+VI  ++IVV+ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  CTEEYCIPIIERVSGLAFNQDFYAGYSPERINPGDKAHRVHNIVKVTSGSTPEVADYVDA  184
             TEE C+P++E+ SGL   +DF+ GYSPERINPGDK H  + I KV SG T EV + V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYRRVVTVGTHKASSIKVAEAAKVIENTQRDINIALVNELALIFKRLNIDTLEVLEAAGT  244
            +Y  VVT G HKASSIKVAEAAKVIENTQRD+NIAL+NELA+IF +L+IDT EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLPFRPGLVGGHCISVDPYYLTHKAQQVGYNPEVILAGRRINDSMGGFVAETVIKMM  304
            KWNFL F+PGLVGGHCI+VDPYYLTHKAQ+VG +PEVILAGRRIND+M+ ++A  VIK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  TQRRIHVVGSRILLMGLAFKENCPDLRNTRVVDIVAELKTYHADIDIYDPWVDPAEAEHE  364
             ++ ++V G+ + ++GL+FKENCPDLRNT+V++I+ ELK Y  ++ + D   D  EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGLTMLETPQANNYDAIIICVGHQQFRDMGAADIRKLGKSSSVLFDVKHILPKDEVD  421
            +GL +++T + +  D +++ V H+++ +    D  +L K  +++FD+K I+  DE++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

248) Weevi_0962 in NC_015144


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1411),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 237/440 (54%), Positives = 329/440 (75%), Gaps = 29/440 (6%)

Query  4    KHKIAVIGLGYVGLPLARLFATKYPTVGFDINQARIAELNSGTDSTLEVEDAILQSVLVT  63
            +++IAV+GLGYVGLP+A  F+ K   +GFDIN++RI EL++  D T EV +  L++   T
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN---T  58

Query  64   ENPYTTQTKGLFCSANLDDIKDANIYVVTVPTPVDKHNKPDLTPLYKSSETVGKVLKKGD  123
            +  YT+++         +D+K A++ +++VPTP+DKHNKPDL PL K+SETVGKV+  + 
Sbjct  59   NIEYTSNA---------EDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDT  109

Query  124  IVIYESTVYPGVTEEECVPVLERVSGLKFNQDFFAGYSPERINPGDKEHTVEKILKVTSG  183
            IV+YESTVYPG TEEECVPVLE+ SGL   +DFF GYSPERINPGDK HT E I KV SG
Sbjct  110  IVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSG  169

Query  184  STPEIGKIVNDLYKSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNLLDI  243
             T E+  IV D+Y SV+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ LDI
Sbjct  170  QTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDI  229

Query  244  DTHAVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEHGYHPEIILAGRRLNDSMG  303
            DT+ VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M+
Sbjct  230  DTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMA  289

Query  304  EYVASQVVKAMIKKGIKVNGAKVLNLGITFKENCPDVRNTKAVDVIRALEEYSIDVTTYD  363
             Y+AS+V+K ++K+G+ V+GA V  LG+TFKENCPD+RNTK +++I  L EY+++VT  D
Sbjct  290  KYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVND  349

Query  364  PWANPEEVMHEYEIKSCQNIKECFsdtdhssndssdKKQFDVIILTVAHREFLDLNLS--  421
              A+ +E    + +   +  KE               K  DV++++V+H+++++ +    
Sbjct  350  VEADKNEAKKFFGLDLIDT-KE--------------LKMVDVVLFAVPHKDYMENKKDYI  394

Query  422  QFLKEVGVVYDVKGILEQAD  441
            +++K+ G+V+D+KGI++  +
Sbjct  395  NLVKDCGIVFDIKGIINSDE  414

249) Lacal_1030 in NC_015638


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  375 bits (1408),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 230/429 (54%), Positives = 329/429 (77%), Gaps = 13/429 (3%)

Query  1    MKKNIAIIGLGYVGLPLAVEFAKKYNVVGFDINPNRVEELNNGHDSTLEVSDENLNAVLN  60
            M++NIA++GLGYVGLP+AV F++K +V+GFDIN +R+ EL+N  D T EV++++L+    
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK----  56

Query  61   LKENQIGLKLSCDVKDIANCNVYIVTVPTPVDINNRPVLTPLIKASETIGGILTKDDIVI  120
                +  +  + +  D+ + +  I++VPTP+D +N+P L PL+KASET+G ++T D IV+
Sbjct  57   ----NTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVV  112

Query  121  YESTVYPGVTEDECVPVLEKTSGLKFNQDFYCGYSPERINPGDKQHTVANILKVTSGSTP  180
            YESTVYPG TE+ECVPVLEK SGL   +DF+ GYSPERINPGDK HT   I KV SG T 
Sbjct  113  YESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTL  172

Query  181  EIGEVVNNLYASIITAGTHLAPTIKVAEAAKVIENAQRDINIAFVNELAKIFNKLDIDTH  240
            E+ E+V ++Y+S++TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+KLDIDT+
Sbjct  173  EVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTN  232

Query  241  SVLEAAATKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEVGYHPEIILAGRRLNDSMGDFV  300
             VL A++TKWNFL FKPGLVGGHCIGVDPYYL++KAQEVG HPE+ILAGRR+ND+M+ ++
Sbjct  233  EVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYI  292

Query  301  ATEVLKLMVTKNIAVKNAKVLMLGITFKENCPDIRNTKAIDVYTALTNFNMNVDVYDPWA  360
            A++V+K ++ + + V+ A V +LG+TFKENCPD+RNTK I++   L ++ +NV V D  A
Sbjct  293  ASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEA  352

Query  361  DQEEVKEEYNISTIQTLG-KNYDAIVHVVSHKEFldldlnnlKSNK--GIVYDVKGSLNI  417
            D++E K  + +  I+T   K  D ++  V+HK++++   + ++  K  GIV+D+KG +N 
Sbjct  353  DKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINS  412

Query  418  NE--VTKRL  424
            +E  V++RL
Sbjct  413  DELNVSQRL  421

250) wecC in NC_014323


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1407),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 232/413 (57%), Positives = 316/413 (77%), Gaps = 2/413 (0%)

Query  7    KLAVIGLGYVGLPLAVEFGRKRPVIGFDINQRRIDELKSGNDFTLETTPEELSAATKLSF  66
            ++AV+GLGYVGLP+AV FG K+ VIGFDIN+ RI ELK+  D T E T + L   T++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  67   TTSLEDLRTCSCYIVTVPTPIDEYKRPDLPPLIKASETVGKVLKKGDIVIYESTVYPGCT  126
            T++ EDL+     I++VPTPID  ++PDL PL+KASETVGKV+  + IV+YESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLELHSGLKFNEDFFCGYSPERINPGDKEHRVTTIKKVTSGSTPAVADIVDALY  186
            EE+CVPVLE  SGL    DFF GYSPERINPGDK H   TI KV SG T  V +IV  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NEIIVAGTHKAESIRVAEAAKVIENTQRDlnialinelaliFNKMGIDTEAVLKAAGSKW  246
            + ++ AG HKA SI+VAEAAKVIENTQRD+NIAL+NELA+IF+K++IDT+ VLKA+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGTYVVAQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ ++++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KRIQVEGAKVLVMGFTFKENCPDLRNTRVVDIVAELKDYNCEVDVYDPWVTTEEAEHEYG  366
            + ++V+GA V V+G+TFKENCPDLRNT+V++I+ ELK+Y  +V V D     +EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPIAAPHPRSYDAIILAVAHQQFKEMGAQAIRALGKTSTVLYDLKYVLSTTE  419
            +  I + + +  D +++AV+H+++ E   + I  L K   +++D+K ++++ E
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

251) tviB in NC_004757


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1407),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 231/416 (56%), Positives = 320/416 (77%), Gaps = 2/416 (0%)

Query  7    RLAVVGLGYVGLPLAVEFGRKRSVVGFDINQRRIDELKNGNDFTLETTREELAAAKYLTY  66
             +AVVGLGYVGLP+AV FG K+ V+GFDIN+ RI ELKN  D T E T + L  ++ + Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEY  62

Query  67   TTNIDDLRDCNCYIVTVPTPIDEHKRPDLTPLIKASETVGKVLKKGDIVIYESTVYPGCT  126
            T+N +DL+  +  I++VPTPID H++PDL PL+KASETVGKV+  + IV+YESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  127  EEDCVPVLERVSGLKFNQDFYCGYSPERINPGDKEHRVTTIRKVTSGSTSEVADLVDELY  186
            EE+CVPVLE+ SGL   +DF+ GYSPERINPGDK H   TI KV SG T EV ++V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  187  NEIITVGTHKAESIKVAEAAKVIENTQRDlnialinelaliFNKMGIDTEAVLKAAGSKW  246
            + ++T G HKA SIKVAEAAKVIENTQRD+NIAL+NELA+IF+K++IDT+ VLKA+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGTYVVAQLVKAMTK  306
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G HPE+ILAGRR+ND+M+ Y+ ++++K + K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KRIQVEGARVLVMGLAFKENCPDLRNTRIVDIVAELKDYNCVVDVYDPWVSLQEAQHEYG  366
            + ++V+GA V V+GL+FKENCPDLRNT++++I+ ELK+Y   V V D     +EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  ITPIGTPKPGSYDAIILAVAHHQFKDMGASAIRALGKPDAVLYDLKYVLDPQGADL  422
            +  I+T      D +++AV+H ++ +        L K  ++++D+K +++++  ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

252) CA2559_13083 in NC_014230


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1407),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 233/426 (55%), Positives = 324/426 (77%), Gaps = 20/426 (4%)

Query  5    TIAIIGLGYVGLPLARLFATKYPVIGFDINENRVAKLNKGHDDTLEVEDDILQEVLVQDK  64
             IA++GLGYVGLP+A  F+ K  VIGFDINE+R+  L++  D T EV ++ L++  ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE--  61

Query  65   SQLENKGQGLLCTSEVSDIKDCNVFIVTVPTPVDKNNRPILTPLYKASETIGGVLKKGDI  124
                        TS+  D+K  + +I++VPTP+DK+N+P L PL KASET+G V+  + I
Sbjct  62   -----------YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTI  110

Query  125  VIYESTVYPGATEEECVPVLERTSNLKFNEDFFVGYSPERINPGDKEHTVEKILKVTSGS  184
            V+YESTVYPGATEEECVPVLE+ S L    DFFVGYSPERINPGDK HT E I KV SG 
Sbjct  111  VVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQ  170

Query  185  TPEIGKKVDALYAEVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNMMDIN  244
            T E+   V  +Y+ V+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ +DI+
Sbjct  171  TLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDID  230

Query  245  THDVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQELGYHPEIILAGRRMNDSMGQ  304
            T++VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE+G HPE+ILAGRR+ND+M++
Sbjct  231  TNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAK  290

Query  305  YVASEVVKLMLKHDLKVKNAKILVLGITFKENCPDVRNTKVVDVVKHLKDYGTNVTIYDP  364
            Y+AS+V+K +LK++L V+ A + VLG+TFKENCPD+RNTKV++++ +LK+YG NVT+ D 
Sbjct  291  YIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDV  350

Query  365  WANPEEVQHEYGLPCHAELDSASHKAYDAIVLTVAHKQFLELNLDDYKS---NNAVVYDV  421
             A+ +E +  +GL     +D+   K  D ++++V+HK+++E N  DY +   + ++V+D+
Sbjct  351  EADKNEAKKFFGL---DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDI  406

Query  422  KGILGG  427
            KGI+ +
Sbjct  407  KGIINS  412

253) Niako_5359 in NC_016609


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1405),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 233/424 (55%), Positives = 319/424 (76%), Gaps = 19/424 (4%)

Query  8    HLTVIGLGYVGLPLAVEFAKKYPVVGFDINKARIAELRSGNDHTLEISSDHLSSVLKKQV  67
            +++V+GLGYVGLP+AV F++K  V+GFDIN +RI EL++  D+T E++ + L +    ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  68   DGANGLWVSDQLEDIKTANVFIITVPTPVDKYNRPDLTPLVKASETVGKILKKGDIVVYE  127
            +       + + ED+K A+ +II+VPTP+DK N+PDL PL+KASETVGK++  + IVVYE
Sbjct  61   E------YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  128  STVYPGVTEEECVPILEKVSGLTFNKDFYAGYSPERINPGDKEHTVTKIKKVTSGSTPEA  187
            STVYPG TEEECVP+LEK SGL   KDF+ GYSPERINPGDK HT   I KV SG T E 
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  188  AKIVNDIYSSIIVAGTHLAPSIKVAEAAKVIENAQRDINIAFINELAKIFNLLDIDTQEV  247
              IV D+YSS++ AG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF+ LDIDT+EV
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  248  LAAASTKWNFLPFRPGLVGGHCIGVDPYYLAQKAMEVGYHPEIILAGRRLNDGMGGYVAG  307
            L A++TKWNFL F+PGLVGGHCIGVDPYYL++KA EVG HPE+ILAGRR+ND M+ Y+A+
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  308  EVVKLMVKKGIPVAGSKALVLGITFKENCPDVRNTKVIDIISHLKSYNVSVDVYDPWANP  367
            +V+K ++K+G+ V G+   VLG+TFKENCPD+RNTKVI+II +LK Y ++V V D  A+ 
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  368  EEVLHEYGVKTVQELPATQSQYNAVILAVAHKEF-----GYETIKKLCSDKCVLFDVKAH  422
            +E    +G+  ++         + V++AV+HK++     +Y  + K C+   ++FD+K+ 
Sbjct  355  NEAKKFFGLDLID--TKELKMVDVVLFAVPHKDYMENKKDYINLVKDCG---IVFDIKGI  409

Query  423  LGKD  426
            +  D
Sbjct  410  INSD  413

254) FCOL_03640 in NC_016510


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1405),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 230/418 (56%), Positives = 319/418 (77%), Gaps = 11/418 (2%)

Query  13   KIGVIGLGYVGLPLARLLATKYAVVGFDINQFRIVGLNEGNDATLEVSSKLLKEVLKPMN  72
            +I+V+GLGYVGLP+A  ++ K  V+GFDIN+ RI  L++  D T EV+ + LK+      
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN------  57

Query  73   DNSNGLFCSCDLNNLIDCNYFIVTVPTPVDKHNKPDLAPLYKASETVGKVLKKGDIVIYE  132
                 +  + + ++L   +++I++VPTP+DKHNKPDL PL KASETVGKV+  + IV+YE
Sbjct  58   ---TNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  133  STVYPGATEEECVPVLEKISNLKFNVDFFVGYSPERINPGDKEHTVEKILKVTSGSTPEI  192
            STVYPGATEEECVPVLEK S L    DFFVGYSPERINPGDK HT E I KV SG T E+
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  193  GQKVDALYSSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNLLNIDTQAV  252
             + V  +YSSV+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ L+IDT+ V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  253  LEAAATKWNFLSFKPGLVGGHCIGVDPYYLAQKAQEKGYHPEIILAGRRLNDSMGEYVAS  312
            L A++TKWNFL+FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M+ Y+AS
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  313  QVVKLMIKKGISVNGSKVLMLGITFKENCPDVRNTKIVDMIAALKDYGIEVVIYDPWVSI  372
            +V+K ++K+G+ V+G+ V +LG+TFKENCPD+RNTK++++I  LK+YG++V + D     
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  373  EEVKDEYNLKALTELPSDRFDGVVLGVAHHQFLNL--DFASLQKEKSIIYDVKGILHC  428
            +E K  + L  +        D V+++V+H ++++   D+ +L K+ +I++D+KGI++ 
Sbjct  355  NEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINS  412

255) R2APBS1_2152 in NC_020541


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1404),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 224/417 (54%), Positives = 310/417 (75%), Gaps = 2/417 (0%)

Query  6    NTKLAIVGLGYVGLPLAVEFGKHYDTVGFDIKKARIDELVAGRDNTLEVDTAELAAATRL  65
            N ++A+VGLGYVGLP+AV FG+    +GFDI+ +RI EL    D T EV    L   T +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNI  60

Query  66   RFSAELDDLRDRDTYIVTVPTPIDLAKRPDLTPLIKASETLAKVLKPGDVVVYESTVYPG  125
             ++++ +DL+  D  I++VPTPID  ++PDL PL+KASET++KV+ P+ +VVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  126  CTEEVCVPILEKGSGLVYNRDFFAGYSPERINPGDKQHRVTGIRKVTSGSTPETADFVDR  185
             TEE CVP+LEK SGLV  +DFF GYSPERINPGDK H    I KV SG T E  ++V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  186  LYSSVITAGTYRASSLKVAEAAKVIENTQRDLNIALVNDLAILFNKLGIDTLEVLEAAGT  245
            +YSSV+TAG  +ASS+KVAEAAKVIENTQRD+NIAL+N+LAI+F+KL+IDT EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  246  KWNFLPFRPGLVGGHCISVDPYYLTHKAQEVGHHSDVILAGRRTNDGMGPYIAGEVIRLM  305
            KWNFL F+PGLVGGHCI+VDPYYLTHKAQEVGHH++VILAGRR ND M+ YIA++VI+ +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  306  VRKGINPVQARVLILGLAFKENCPDLRNTRVVDIVLALHGYNAQVDVHDPWINAAEAEHE  365
            +++G++   A V +LGL+FKENCPDLRNT+V++I+  L  Y  +V V+D   +  EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  366  YAITPLAQPQTGSYDAVIIAVGHQQFVGMGPAGIRAFGKAASVLYDVKCLLPREAVD  422
            +++  +   +    D V++AV H++++     +   + K  ++++D+K ++  + ++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

256) tviB in NC_012125


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1404),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 216/416 (52%), Positives = 316/416 (76%), Gaps = 2/416 (0%)

Query  8    KIAIIGLGYVGLPLAVEFGKSRQVVGFDVNKKRILELKNGVDVNletteeelrearYLKF  67
            +IA++GLGYVGLP+AV FG+ ++V+GFD+N  RI ELKN  D   +   E+      + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYD-RTNEVTENKLKNTNIEY  62

Query  68   TSEIEKIKECNFYIITVPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYPGCT  127
            TS+ E +K  +F II+VPTPI+  ++PDL PL+KASETVG V+  + IVVYESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEECVPILARMSGMTFNQDFYVGYSPERINPGDKKHRLTNIKKITSGSTAQIAELIDEVY  187
            EEECVP+L + SG+   +DF+VGYSPERINPGDK H +  I K+ SG T ++ E++ +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  QQIISAGTYKAESIKVAEAAKVIENTQRDLNIALVNELAIIFNRLNIDTEAVLRAAGSKW  247
              +++AG  KA SIKVAEAAKVIENTQRD+NIAL+NELAIIF++L+IDT+ VL+A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKSQGIGYYPEIILAGRRLNDNMGNYVSEQLIKAMIK  307
            NFL F+PGLVGGHCIGVDPYYLTHK+Q +G  PE+ILAGRR+NDNM++Y++ ++IK ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KGINVEGSSVLILGFTFKENCPDIRNTRIIDVVKELGKYSCKVDIFDPWVDAEEVRREYG  367
            +G++V+G++V +LG+TFKENCPD+RNT++I+++ EL  Y+ +V + D   D +E ++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IIPVSEVKSSHYDAIIVAVGHQQFKQMGSEDIRGFGKDKHVLYDLKYVLPAEQSDV  423
            +  +        D ++ AV H+++ +    D   + KD  +++D+K ++ +++ +V
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

257) tviB in NC_003198


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1404),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 216/416 (52%), Positives = 316/416 (76%), Gaps = 2/416 (0%)

Query  8    KIAIIGLGYVGLPLAVEFGKSRQVVGFDVNKKRILELKNGVDVNletteeelrearYLKF  67
            +IA++GLGYVGLP+AV FG+ ++V+GFD+N  RI ELKN  D   +   E+      + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYD-RTNEVTENKLKNTNIEY  62

Query  68   TSEIEKIKECNFYIITVPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYPGCT  127
            TS+ E +K  +F II+VPTPI+  ++PDL PL+KASETVG V+  + IVVYESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEECVPILARMSGMTFNQDFYVGYSPERINPGDKKHRLTNIKKITSGSTAQIAELIDEVY  187
            EEECVP+L + SG+   +DF+VGYSPERINPGDK H +  I K+ SG T ++ E++ +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  QQIISAGTYKAESIKVAEAAKVIENTQRDLNIALVNELAIIFNRLNIDTEAVLRAAGSKW  247
              +++AG  KA SIKVAEAAKVIENTQRD+NIAL+NELAIIF++L+IDT+ VL+A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKSQGIGYYPEIILAGRRLNDNMGNYVSEQLIKAMIK  307
            NFL F+PGLVGGHCIGVDPYYLTHK+Q +G  PE+ILAGRR+NDNM++Y++ ++IK ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KGINVEGSSVLILGFTFKENCPDIRNTRIIDVVKELGKYSCKVDIFDPWVDAEEVRREYG  367
            +G++V+G++V +LG+TFKENCPD+RNT++I+++ EL  Y+ +V + D   D +E ++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IIPVSEVKSSHYDAIIVAVGHQQFKQMGSEDIRGFGKDKHVLYDLKYVLPAEQSDV  423
            +  +        D ++ AV H+++ +    D   + KD  +++D+K ++ +++ +V
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

258) STBHUCCB_46080 in NC_016832


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1404),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 216/416 (52%), Positives = 316/416 (76%), Gaps = 2/416 (0%)

Query  8    KIAIIGLGYVGLPLAVEFGKSRQVVGFDVNKKRILELKNGVDVNletteeelrearYLKF  67
            +IA++GLGYVGLP+AV FG+ ++V+GFD+N  RI ELKN  D   +   E+      + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYD-RTNEVTENKLKNTNIEY  62

Query  68   TSEIEKIKECNFYIITVPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYPGCT  127
            TS+ E +K  +F II+VPTPI+  ++PDL PL+KASETVG V+  + IVVYESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEECVPILARMSGMTFNQDFYVGYSPERINPGDKKHRLTNIKKITSGSTAQIAELIDEVY  187
            EEECVP+L + SG+   +DF+VGYSPERINPGDK H +  I K+ SG T ++ E++ +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  QQIISAGTYKAESIKVAEAAKVIENTQRDLNIALVNELAIIFNRLNIDTEAVLRAAGSKW  247
              +++AG  KA SIKVAEAAKVIENTQRD+NIAL+NELAIIF++L+IDT+ VL+A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKSQGIGYYPEIILAGRRLNDNMGNYVSEQLIKAMIK  307
            NFL F+PGLVGGHCIGVDPYYLTHK+Q +G  PE+ILAGRR+NDNM++Y++ ++IK ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KGINVEGSSVLILGFTFKENCPDIRNTRIIDVVKELGKYSCKVDIFDPWVDAEEVRREYG  367
            +G++V+G++V +LG+TFKENCPD+RNT++I+++ EL  Y+ +V + D   D +E ++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IIPVSEVKSSHYDAIIVAVGHQQFKQMGSEDIRGFGKDKHVLYDLKYVLPAEQSDV  423
            +  +        D ++ AV H+++ +    D   + KD  +++D+K ++ +++ +V
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

259) TY21A_22165 in NC_021176


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1404),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 216/416 (52%), Positives = 316/416 (76%), Gaps = 2/416 (0%)

Query  8    KIAIIGLGYVGLPLAVEFGKSRQVVGFDVNKKRILELKNGVDVNletteeelrearYLKF  67
            +IA++GLGYVGLP+AV FG+ ++V+GFD+N  RI ELKN  D   +   E+      + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYD-RTNEVTENKLKNTNIEY  62

Query  68   TSEIEKIKECNFYIITVPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYPGCT  127
            TS+ E +K  +F II+VPTPI+  ++PDL PL+KASETVG V+  + IVVYESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEECVPILARMSGMTFNQDFYVGYSPERINPGDKKHRLTNIKKITSGSTAQIAELIDEVY  187
            EEECVP+L + SG+   +DF+VGYSPERINPGDK H +  I K+ SG T ++ E++ +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  QQIISAGTYKAESIKVAEAAKVIENTQRDLNIALVNELAIIFNRLNIDTEAVLRAAGSKW  247
              +++AG  KA SIKVAEAAKVIENTQRD+NIAL+NELAIIF++L+IDT+ VL+A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKSQGIGYYPEIILAGRRLNDNMGNYVSEQLIKAMIK  307
            NFL F+PGLVGGHCIGVDPYYLTHK+Q +G  PE+ILAGRR+NDNM++Y++ ++IK ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KGINVEGSSVLILGFTFKENCPDIRNTRIIDVVKELGKYSCKVDIFDPWVDAEEVRREYG  367
            +G++V+G++V +LG+TFKENCPD+RNT++I+++ EL  Y+ +V + D   D +E ++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IIPVSEVKSSHYDAIIVAVGHQQFKQMGSEDIRGFGKDKHVLYDLKYVLPAEQSDV  423
            +  +        D ++ AV H+++ +    D   + KD  +++D+K ++ +++ +V
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

260) tviB in NC_004631


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  374 bits (1404),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 216/416 (52%), Positives = 316/416 (76%), Gaps = 2/416 (0%)

Query  8    KIAIIGLGYVGLPLAVEFGKSRQVVGFDVNKKRILELKNGVDVNletteeelrearYLKF  67
            +IA++GLGYVGLP+AV FG+ ++V+GFD+N  RI ELKN  D   +   E+      + +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYD-RTNEVTENKLKNTNIEY  62

Query  68   TSEIEKIKECNFYIITVPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYPGCT  127
            TS+ E +K  +F II+VPTPI+  ++PDL PL+KASETVG V+  + IVVYESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEECVPILARMSGMTFNQDFYVGYSPERINPGDKKHRLTNIKKITSGSTAQIAELIDEVY  187
            EEECVP+L + SG+   +DF+VGYSPERINPGDK H +  I K+ SG T ++ E++ +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  QQIISAGTYKAESIKVAEAAKVIENTQRDLNIALVNELAIIFNRLNIDTEAVLRAAGSKW  247
              +++AG  KA SIKVAEAAKVIENTQRD+NIAL+NELAIIF++L+IDT+ VL+A+G+KW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLPFRPGLVGGHCIGVDPYYLTHKSQGIGYYPEIILAGRRLNDNMGNYVSEQLIKAMIK  307
            NFL F+PGLVGGHCIGVDPYYLTHK+Q +G  PE+ILAGRR+NDNM++Y++ ++IK ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KGINVEGSSVLILGFTFKENCPDIRNTRIIDVVKELGKYSCKVDIFDPWVDAEEVRREYG  367
            +G++V+G++V +LG+TFKENCPD+RNT++I+++ EL  Y+ +V + D   D +E ++ +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IIPVSEVKSSHYDAIIVAVGHQQFKQMGSEDIRGFGKDKHVLYDLKYVLPAEQSDV  423
            +  +        D ++ AV H+++ +    D   + KD  +++D+K ++ +++ +V
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

261) vipA in NC_016112


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  373 bits (1401),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 237/412 (58%), Positives = 323/412 (79%), Gaps = 2/412 (0%)

Query  6    KLGMIGLGYVGLPLAVEFGKKYPTIGFDINAERIKELQNGSDHTLEVSEEELKEAVHLTY  65
            +++++GLGYVGLP+AV FG+K   IGFDIN  RIKEL+N  D+T EV+E+ LK++ ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  66   TSSSEEIKACNIYIVTVPTPINEYKQPDLSPLEKASTLLGGLIKPNDIVIYESTVYPGAT  125
            TS++E++K  ++ I++VPTPI+  ++PDL PL KAS  +G +I P+ IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  126  EEVCVPILEKISGLTFNQDFFVGYSPERINPGDKEHRVTNILKVTSGSTPEIADRIDRLY  185
            EE CVP+LEK SGL   +DFFVGYSPERINPGDK H    I KV SG T E+ + +  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  186  QSIITAGTHKASSIKVAEAAKVIENTQRDlnialinelaiiFNKLGIDTEEVLLAAGTKW  245
             S++TAG HKASSIKVAEAAKVIENTQRD+NIAL+NELAIIF+KL+IDT+EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  246  NFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYNPEVILSGRRINDGMGEYVVSQLIKLMLK  305
            NFL F+PGLVGGHCIGVDPYYLTHKAQ +G +PEVIL+GRRIND M+ Y+ S++IK +LK
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  306  KRIHIKDSDVLIMGLTFKENCPDLRNTRVVDIVKELQSYGVNVHVYDPWIDPAEAMEEYG  365
            + ++++++ V ++GLTFKENCPDLRNT+V++I+ EL+ YG+NV V D   D  EA   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  366  ITTIDKAEVGCYDAILLAVAHEQFKRMDITSIKALGKKESVIYDLKYVFPAE  417
            +  ID  E+   D +L+AV+H ++       I+ L K  ++++D+K ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGIINSD  413

262) Sama_2260 in NC_008700


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  373 bits (1401),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 229/416 (56%), Positives = 319/416 (77%), Gaps = 2/416 (0%)

Query  8    KIGVIGLGYVGLPLAVEFGKKYPTLGFDINELRVRELSQGRDATLECTAEELSEASLLKY  67
            +I+V+GLGYVGLP+AV FG+K   +GFDINE R++EL +  D T E T + L ++++  Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EY  62

Query  68   TSTLEDIKDCNFYIVTVPTPIDESNAPDLTPLKKASEALGKVISLDDIVVFESTVYPGAT  127
            TS  ED+K  +F I++VPTPID  N PDL PL KASE++GKVI+ D IVV+ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEYCIPIIERVSNLMFNRDFYAGYSPERINPGDKVNRLTTIVKITSGSTPEVADFVDAVY  187
            EE C+P++E+ S L+  +DF+ GYSPERINPGDKV+ + TI K+ SG T EV ++V  VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  SSIVSAGTHKASSIKVAEAAKVIENTQRDLNIAVINEFAKIFNRLKIDTEEVLKAAGTKW  247
            SS+V+AG HKASSIKVAEAAKVIENTQRD+NIA++NE+A IF++L IDT+EVLKA+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  248  NFLHFKPGLVGGHCISVDPYYLTHKAKEVGYSPEVILAGRRINDGMGSYVATQMVKKLAS  307
            NFL+FKPGLVGGHCI+VDPYYLTHKA+EVG  PEVILAGRRIND M+ Y+A++++K L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  308  KKIHIDEANVLIMGFTFKGDCPDVRNTKVIEIVKELKSFNINVDVYDSWANPDEVEHEYG  367
            + ++++ A V ++G+TFK +CPD+RNTKVI+I+ ELK + +NV V D  A+ +E    +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  368  IKMISELFNGYYDGIIVAVDHSEFKQMGIQKVRLLGRPNHVVYDVKYVFGLNDSDI  423
            + +I        D ++ AV H ++ +   + + L+ +   +V+D+K ++  ++ ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLV-KDCGIVFDIKGIINSDELNV  417

263) CJA_3426 in NC_010995


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  373 bits (1402),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 229/417 (55%), Positives = 309/417 (75%), Gaps = 2/417 (0%)

Query  5    NPRLCIIGLGYVGLPLAVEFGKKIDTIGFDINPARIDALRQGEDHTLELNREELTQATRL  64
            N  + ++GLGYVGLP+AV FG+K   IGFDIN +RI  L++  D+T E+  + L + T +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNI  60

Query  65   SYTTRENDITGCDVYIVTVPTPINDSKQPDLTPLEKASALLGRVIDKNAIVVFESTVYPG  124
             YT+  +D+   D  I++VPTPI+  ++PDL PL KAS  +G+VI  ++IVV+ESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  CTEEVCVPIIEQGSGLVFNRDFFAGYSPERINPGDKQHRVHNITKITSGSTPEVAEYIDQ  184
             TEE CVP++E+ SGLV  +DFF GYSPERINPGDK H  + ITK+ SG T EV E + +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYRQIVVVGTHKASSIKVAEAAKVIENTQRDINIALVNELALIFKRLDIDTLEVLEAAGT  244
            +Y  +V  G HKASSIKVAEAAKVIENTQRD+NIAL+NELA+IF +LDIDT EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLPFRPGLVGGHCISVDPYYLTHKAQQVGYNPEVILAGRRINDGMGTFVAESVVKMM  304
            KWNFL F+PGLVGGHCI+VDPYYLTHKAQ+VG +PEVILAGRRIND M+ ++A +V+K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  TQRKCHVVDSNILIMGLTFKENCPDLRNTRVIDIIHELKNYNANVHVYDPWADPVEAQHE  364
             ++  +V ++ + ++GLTFKENCPDLRNT+VI+II+ELK+Y  NV V D  AD  EA+  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGLALINQPQANTYDAIILCVGHEQFRALGADAIRTLGKTNHVLFDVKHVLPKAAVD  421
            +GL LI+  + +  D +++ V H ++     D I  L K   ++FD+K ++    ++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

264) wbpO in NC_009613


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  373 bits (1403),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 231/421 (55%), Positives = 324/421 (77%), Gaps = 15/421 (3%)

Query  2    KIAVIGLGYVGLPLARLFATKYDVVGFDINTKRVSELHSGLDSTLEVSQELLQSVLKTEN  61
            +IAV+GLGYVGLP+A  F+ K  V+GFDIN  R+ EL +  D T EV+++ L+      N
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK------N  57

Query  62   TNTEGLFCSTNIDDIKDCNHYIVTVPTPVDKNNKPDLTPLYKSSETVGQVLKKGDIVIYE  121
            TN E    ++N +D+K  +  I++VPTP+DK+NKPDL PL K+SETVG+V+  + IV+YE
Sbjct  58   TNIE---YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  122  STVYPGVTEEECVPVLEKTSGLKFNIDFFAGYSPERINPGDKEHTVDKILKVTSGSTPEI  181
            STVYPG TEEECVPVLEK SGL    DFF GYSPERINPGDK HT + I KV SG T E+
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  182  GEKVNELYKSVITAGTHLAPTIRVAEAAKVIENSQRDINIAFVNELAKIFNVLGIDTQDV  241
             E V ++Y SV+TAG H A++I+VAEAAKVIEN+QRD+NIA++NELA IF+ L+IDT++V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  242  LAAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQQMGYHPEIILAGRRLNDSMGEYVAS  301
            L A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQ++G HPE+ILAGRR+ND+M+ Y+AS
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  302  QVVKLMSKREIGVNNAELLMLGIAFKENCPDVRNTKIVDVISALKEYGIHVTIYDPWVNP  361
            +V+K + K+ + V+ A + +LG++FKENCPD+RNTK++++I  LKEYG++VT+ D   + 
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  362  ADVLHEYNLQ--TAKELPSIKFDAVVLGVAHQEFLSL--DFKSLQKEKSILYDVKGILGN  417
             +    + L+   +KEL  +  D V+++V+H++++    D+ +L K+ +I++D+KGI+ +
Sbjct  355  NEAKKFFGLDLIDTKELKMV--DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINS  412

Query  418  H  418
            +
Sbjct  413  D  413

265) ELI_4555 in NC_014624


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  373 bits (1403),  Expect = 8e-105, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 306/386 (80%), Gaps = 2/386 (0%)

Query  13   KLSVIGLGYVGLPIAAAFSKKVPVIGFDTNQKKIEVYRQGEDPTREVGDEAVRNCSVDFT  72
            +++V+GLGYVGLP+A +F++K  VIGFD N+ +I   ++  D T EV ++ ++N ++++T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   GDEKRLGEARFHIVTVPTPVRRDKTPDL-SLVKAASRILGRNLKKGSVVVYESTVYPGVT  131
            ++   L  A F I++VPTP+ +++ PDL +L+KA+  + G+ +  +++VVYESTVYPG T
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETV-GKVITPDTIVVYESTVYPGAT  122

Query  132  EEICLPILEKTSGLKCGRDFKIGYSPERINPGDKVHRLENIVKIVSGMDAETLDTVAEVY  191
            EE C+P+LEK SGL CG+DF +GYSPERINPGDKVH +E I K+VSG   E L+ VA+VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  192  SMVVEAGVHRAESIRVAEAAKVIENSQRDINIAFMNELSIMFNRMGIDTKAVLEAAGTKW  251
            S VV AGVH+A SI+VAEAAKVIEN+QRD+NIA+MNEL+I+F++++IDT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  252  NFMEFTPGLVGGHCIGVDPYYLTHKAEMLGYKSQVILSGRRINDSMGCYVAENAVKQLIK  311
            NF++F PGLVGGHCIGVDPYYLTHKA+ +G  ++VIL+GRRIND+M+ Y+A N +K+L+K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  312  KDVTIPQARVGILGFTFKENCPDSRNTKVMDIIRELREYGIEPVVCDPEADPAEARAHFD  371
            +++ +  A V +LG+TFKENCPD RNTKV++II EL+EYG++  V D EAD  EA+  F+
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  372  IKLSNITdleeldlliiAVAHSRFKE  397
            + L +  +L  +D++++AV+H  + E
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME  388

266) Belba_2379 in NC_018010


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  373 bits (1403),  Expect = 8e-105, Method: Compositional matrix adjust.
 Identities = 224/436 (52%), Positives = 323/436 (75%), Gaps = 22/436 (5%)

Query  7    NSKIAIIGLGYVGLPLAVAFAERYKTVGYDIDSKRVEELQKGHDRTLEVEDEDLQKVLVK  66
            N +IA++GLGYVGLP+AV+F+++ K +G+DI+  R+ EL++  DRT EV ++ L      
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL------  55

Query  67   TPEELEEKRIGLQITGSVPPISSCNIYIVTVPTPTDKHNKPVLTPMLKASEAIGRVLKKG  126
                   K   ++ T++   +   ++ I++VPTP DKHNKP L P+LKASE++G+V+  +
Sbjct  56   -------KNTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPD  108

Query  127  DVVIYESTVYPGVTEEECVPVLVKVSGLKFNEDFFAGYSPERINPGDKEHTVTKILKVTS  186
             +V+YESTVYPG TEEECVPVL K SGL    DFF GYSPERINPGDK HT   I KV S
Sbjct  109  TIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVS  168

Query  187  GSTPEVATYVDDLYKSVITAGTHQASSIKVAEAAKVIENSQRDINIAFVNELSKIFNLLN  246
            G T EV   V D+Y SV+TAG H+ASSIKVAEAAKVIEN+QRD+NIA++NEL+ IF+ L+
Sbjct  169  GQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLD  228

Query  247  IDTQEVLEAAGTKWNFLPFKPGLVGGHCIGVDPFYLAQKAQEVGYHPEIILAGRRLNDSM  306
            IDT+EVL A+GTKWNFL FKPGLVGGHCIGVDP+YL++KAQEVG HPE+ILAGRR+ND+M
Sbjct  229  IDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNM  288

Query  307  GKHVATETIKHMMRKDLKVIDSKVLILGFTFKEDCPDVRNTRVIDIYNELKSFDMEVDVY  366
            +K +A++ IK++++++L V ++ V +LG+TFKE+CPD+RNT+VI+I +ELK ++++V V 
Sbjct  289  AKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVN  348

Query  367  DHWASREEVEHDYDISMLDKNKKPILSEYAAIILAVAHKEF----RNWNIQKSDHQVIFD  422
            D  A ++E    +++ ++D +    L     +++AV+HK++    ++      D  ++FD
Sbjct  349  DVEADKNEAKKFFGLDLIDTKE---LKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFD  405

Query  423  VKSVLEKE--KVDARL  436
            +K++++ +  +V  RL
Sbjct  406  IKGIINSDELNVSQRL  421

267) BYI23_C010990 in NC_016590


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  373 bits (1402),  Expect = 9e-105, Method: Compositional matrix adjust.
 Identities = 214/373 (58%), Positives = 295/373 (80%), Gaps = 2/373 (0%)

Query  25   FGKRHPVVGFDINRARIGALREGRDVTLEVDDEELASATLMQYSADVEDLRGCTVFIATV  84
            FG++H V+GFDIN +RI  L++  D T EV ++ L ++  ++Y+++ EDL+    +I +V
Sbjct  21   FGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEYTSNAEDLKKADFIIIAV  79

Query  85   PTPIDHYKRPDLSPLISASTTIGSVLKKGDVVIYESTVYPGATEEECVPVLEKMSGLKFN  144
            PTPID  ++PDL PL+ AS T+G V+  + +V+YESTVYPGATEEECVPVLEK SGL   
Sbjct  80   PTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCG  139

Query  145  EDFFVGYSPERINPGDKSHRLPDIKKVTSGSTPEVADFVDELYRGIITAGTHKASSIRVA  204
             DFFVGYSPERINPGDK H +  I KV SG T EV ++V ++Y +++TAG HKASSI+VA
Sbjct  140  KDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVA  199

Query  205  EAAKVIENTQRDVNIALINELSIIFNKMNIDTESVLLAAGTKWNFIPFRPGLVGGHCIGV  264
            EAAKVIENTQRDVNIAL+NEL+IIF+K++IDT+ VL A+GTKWNF+ F+PGLVGGHCIGV
Sbjct  200  EAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGV  259

Query  265  DPYYLTHKAQAIGYHPEIILAGRRLNDSMGNYVVSQLVKTMTKRDIAISGARVLIMGLTF  324
            DPYYLTHKAQ +G HPE+ILAGRR+ND+M++Y+ S+++K + K+++ + GA V ++GLTF
Sbjct  260  DPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTF  319

Query  325  KENCPDLRNTRVVDIIADLKEYGVQVDVYDPWVSKEEAHHEYGIDPIEPAK-GVYDAIVL  383
            KENCPDLRNT+V++II +LKEYG++V V D    K+EA   +G+D I+     + D +++
Sbjct  320  KENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLF  379

Query  384  AVAHKQFADEGAE  396
            AV+HK++ ++  +
Sbjct  380  AVPHKDYMENKKD  392

268) Mmwyl1_0821 in NC_009654


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  372 bits (1400),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 227/407 (56%), Positives = 315/407 (78%), Gaps = 2/407 (0%)

Query  13   KKIAVIGLGYVGLPLAVEFGKKQQVVGFDINQARVSELLSGKDATLEVTSEELKQATSLK  72
            ++IAV+GLGYVGLP+AV FG+K++V+GFDIN++R+ EL +  D T EVT + LK+ T++ 
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIE  61

Query  73   FSSAIEDIKDCNIYIVTVPTPIDEANAPDLTPLRKASAMLAEVIKQNDVVIYESTVYPGA  132
            ++S  ED+K  ++ I++VPTPID  N PDL PL KAS  ++ VI  + +V+YESTVYPGA
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  133  TEEVCIPIIEKASGLKFNEDFFAGYSPERINPGDKVNTLTKIKKITSGSTPEIAKFVDDL  192
            TEE C+P++EK SGL    DFF GYSPERINPGDKV+T+  I K+ SG T E+  +V D+
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  193  YGSIITAGTHSASSIKVAEAAKVIENTQRDLNIAIINEFAKIFNILNIDTQEVLDAAGTK  252
            Y+S++TAG H ASSIKVAEAAKVIENTQRD+NIA++NE+A IF+ L+IDT+EVL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  253  WNFLPFKPGLVGGHCISVDPYYLTYKAKEVGYQPEVILAGRRINDGMGQYTATQLVKAVS  312
            WNFL FKPGLVGGHCI+VDPYYLT KA+EVG +PEVILAGRRIND M++Y A++++K + 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  313  KRKIHVDEAKVLVLGFTFKGDCPDVRNTKIVDMVKELKSFNMHVDVYDHWASPEEVKHEY  372
            K+ ++V+ A V VLG+TFK +CPD+RNTK+++++ ELK + ++V V D  A  +E K  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  373  GIELIGVLKTGYYDAIVLAVDHSDYKKWGEEKIRSLGKEKHVLYDVK  419
            G++LI+       D +++AV H DY     + I +L K+  +++D+K
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIK  407

269) Sph21_1811 in NC_015277


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  372 bits (1400),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 214/424 (51%), Positives = 325/424 (77%), Gaps = 14/424 (3%)

Query  12   NADIAIIGLGYVGLPLAIEFGKKYNVLGFDINQDRVKELSVGKDRTQEANLDDLSKVIKL  71
            N +IA++GLGYVGLP+A+ FG+K +V+GFDIN+ R+KEL    DRT+E           +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNE-----------V  50

Query  72   KADKKHTIGLGFSANKDDLKNYNTFIVTVPTPIDQFKAPDLRPLIKASEMLGSILKKGDL  131
              +K     + +++N +DLK+ + +I++VPTPID+ + PDL PL+KASE +G ++  + +
Sbjct  51   TENKLKNTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTI  110

Query  132  VIYESTVYPGCTEEDCVPVLERVSGLKFNRDFYAGYSPERINPGDKINTLTKIKKVTSGS  191
            V+YESTVYPG TEE+CVPVLE+ SGL   +DF+ GYSPERINPGDK++T+  I KV SG 
Sbjct  111  VVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQ  170

Query  192  TPEIATRVDDLYRSIIEAGTHKAPNIKVAEASKAIENAQRDVNISFVNELSLIFDRIGID  251
            T E+   V D+Y S++ AG HKA++IKVAEA+K IEN+QRDVNI+++NEL++IFD+++ID
Sbjct  171  TLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDID  230

Query  252  THDVIEAAGTKWNFLKYKPGLVGGHCIGVDPYYLAHKAQSLGYHPQVILSGRRVNDNMGP  311
            T++V+ A+GTKWNFL++KPGLVGGHCIGVDPYYL+HKAQ +G HP+VIL+GRR+NDNM+ 
Sbjct  231  TNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAK  290

Query  312  FVANKVVKLMIEKDHKIRGSKALIMGITFKENCPDVRNTRVVDIYHELVSFGLNVDIFDP  371
            ++A++V+K ++ ++  ++G+   ++G+TFKENCPD+RNT+V++I +EL  +GLNV + D 
Sbjct  291  YIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDV  350

Query  372  WADAAEVRHEYGVNIIDKLDDGVVYDAIVVAVSHNEFLSY--DYNKIKRNNGIIFDTKAC  429
             AD  E +  +G+++ID  +  +V D ++ AV+H++++    DY ++ ++ GI+FD K+ 
Sbjct  351  EADKNEAKKFFGLDLIDTKELKMV-DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGI  409

Query  430  LDRA  433
            ++  
Sbjct  410  INSD  413

270) HCH_02713 in NC_007645


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  372 bits (1398),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 233/417 (56%), Positives = 310/417 (75%), Gaps = 2/417 (0%)

Query  6    NAKIAVVGLGYVGLPLAVEFGKKFSTVGFDINAARIEELKSGKDSTLEVEPELLAEANKL  65
            N +IAVVGLGYVGLP+AV FG+K   +GFDIN +RI ELK+  D T EV  + L ++N +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-I  60

Query  66   SYSSKLEDIQSCNVYIVTVPTPIDDFKTPDLRPLQSASRAIGKVLKKDDVVIYESTVYPG  125
             Y+S+ ED++  +  I++VPTPID  + PDL PL  AS ++GKV+  D +V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  126  ATEEVCVPILEEVSGLTFNQDFFAGYSPERINPGDKEHRVINILKVTSGSTPEVAQYIDE  185
            ATEE CVP+LE  SGL   +DFF GYSPERINPGDK H    I KV SG T EV + + +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  186  LYASIIIAGTHKASSIKVAEAAKVIENTQRDVNIALINELSLIFEKLGIDTLEVLEAAGT  245
            +Y+S++ AG HKASSIKVAEAAKVIENTQRDVNIAL+NEL++IF+KL+IDT EVL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  246  KWNFLPFRPGLVGGHCIGVDPYYLTYKAQAVGHHPEIILSGRRINDGMGQHVAERVIRMM  305
            KWNFL F+PGLVGGHCIGVDPYYLT KAQ VGHHPE+IL+GRRIND M++ +A  VI+ +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  306  TQRKQHVAEANILVLGLTFKENCPDIRNTRVVDVISAFKSYNANVDVYDPWASPAEAEHE  365
             ++  +V  A + VLGLTFKENCPD+RNT+V+++I  +K Y  NV V D  A   EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  366  YGIRVIPELKENHYDAIILTVAHKQFKDMGIENIRKLGKDNHVLFDVKYVLPKDAVD  422
            +G+ +I     +  D ++++V+HK++ +   + I +L KD  ++FD+K ++  D ++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

271) Krodi_2790 in NC_015496


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  372 bits (1397),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 226/418 (55%), Positives = 320/418 (77%), Gaps = 11/418 (2%)

Query  5    KVGVIGLGYVGLPLARLFGTKYNTVGFDINKKRIAELQSGTDSTLEVADEVLQSVLKTDN  64
            +++V+GLGYVGLP+A  FG K + +GFDIN  RI EL++  D T EV+++ L++      
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN------  57

Query  65   NDLNGLLCSADSKDIEDCNYYIVTVPTPVDKNNRPVLTPLYKSSETVGKVLKKGDIVVYE  124
                 +  ++++ D+   ++ I++VPTP+DK+N+P L PL K+SETVGKV+  + IVVYE
Sbjct  58   ---TNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  125  STVYPGVTEDECVPVLERVSGLKFNVDFFVGYSPERINPGDKEHTVEKILKVTSGSTPEI  184
            STVYPG TE+ECVPVLE+ SGL    DFFVGYSPERINPGDK HT E I KV SG T E+
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  185  GKKVDDLYSSIITAGTHLAPTIKVAEASKVIENSQRDINIAFVNELAKIFNLMGINTHDV  244
               V D+YSS++TAG H A++IKVAEA+KVIEN+QRD+NIA++NELA IF+ ++I+T++V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  245  LEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQELGYHPEIILAGRRLNDSMGAYVAS  304
            L A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE+G HPE+ILAGRR+ND+M+ Y+AS
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  305  EVVKLMLKNDIKVKGSELLILGITFKENCPDVRNTKVTDVIRHLKEFGVNVTIYDPWVNA  364
            +V+K +LK+++ V+G+ + +LG+TFKENCPD+RNTKV ++I +LKE+G+NVT+ D   + 
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  365  AEVDHEYGLDALTEVPNQKYDAIVQAVAHKEF--ASLDLNSLKNDKSVVYDVKGVLGN  420
             E    +GLD +     +  D ++ AV+HK++     D  +L +D ++V+D+KG++ +
Sbjct  355  NEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINS  412

272) Hprae_0334 in NC_017455


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  372 bits (1399),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 230/427 (54%), Positives = 321/427 (76%), Gaps = 6/427 (1%)

Query  7    KIAITGMGYVGLPLSVAFAEKGLDIIGFDINENKISKYQKGEDSTNEIGKERLSKIDNIK  66
            +IA+ G+GYVGLP++V+F++K   +IGFDINE++I   ++  D TNE+  ++L K  NI 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIE  61

Query  67   YTADEKDLKAANFHIVAVPTPVGKNNVPNLDPVTGASRIVGRNLTEGAIVVYESTVYPGV  126
            YT++  DLK A+F I+AVPTP++K+N P+L P+  AS  VG+ +T ++IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  127  TEEVCVPILEEESGLECGINFKVGYSPERVNPGDKVNTVEKIVKVVSGMDEESLATIASV  186
            TEE CVP+LE  SGL CG +F VGYSPER+NPGDKV+T E I KVVSG   E L  +A V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  187  YEEIIEAGVHRAPSIKVAEASKIIENSQRDVNIAFMNELSMIFDKMNIDTQAVLDAAGTK  246
            Y  ++ AGVH+A+SIKVAEA+K+IEN+QRDVNIA+MNEL++IFDK++IDT+ VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  247  WNFLNFYPGLVGGHCIGVDPYYLTYRSEELGYISQLILNGRRINDQMSNFVAEKTVKKMI  306
            WNFLNF PGLVGGHCIGVDPYYLT +++E+G  +++IL GRRIND+M++++A + +K ++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  307  ESNVKVNGSTVLVMGLTFKENVPDLRNSKVADVIERLEEYHINVKVADPIADPEESVVEH  366
               + V+G+TV V+GLTFKEN PDLRN+KV ++IE L EY +NV V D  AD +E+    
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  367  GIELENLCTINNVDAIIVAVNHKEYQKIELKDFKRYYKECIDKPVFIDVKSIYNSNKAEK  426
            G++L +   ++ VD ++ AV HK+Y   + KD+    K+C    + +D+K+I NS+  + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDC---GIVFDIKGIINSDELNV  417

Query  427  MYNYWRL  433
                WRL
Sbjct  418  SQRLWRL  424

273) NH44784_045621 in NC_021285


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  372 bits (1398),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 219/419 (53%), Positives = 310/419 (74%), Gaps = 1/419 (0%)

Query  1    MCGLGYVGLPVAVAFSRRFDVVGFDVDKRRITSLKEGEDWTGEIERDALLASPMQFTDQV  60
            + GLGYVGLPVAV+F+ +  V+GFD++  RI  LK+  D+T E+  + L  + +++T + 
Sbjct  7    VVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNA  66

Query  61   SELEGCDFFVVAVPTPVDERNNPDFSLLVRACRSIGPVLRPGCIVVFESTVHPGATEEIC  120
             +L   DF+++AVPTP+D +N+PD+  L++A  ++G V+ P+ IVV+ESTV PGATEE C
Sbjct  67   EDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEEC  126

Query  121  GPELEKASGLRCGVDFKLGYSPERINPGDREHPLEKIVKIVSGQDEESLEIIAGVYEQII  180
             P LEK SGL CG DF +GYSPERINPGD+ H +E I K+VSGQ  E LEI+A+VY  ++
Sbjct  127  VPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVV  186

Query  181  DAGVHRASSIKVAEAAKVLENTQRDINIALMNEMSKICDLVGIRTAEVLAAAGTKWNFLK  240
             AGVH+ASSIKVAEAAKV+ENTQRD+NIALMNE++ I D ++I T EVL A+GTKWNFL+
Sbjct  187  TAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLN  246

Query  241  FTPGLVGGHCIGVDPYYLTSKAQELGYHPEVILSGRRINDGMAGHVASRVVQTLARNGRL  300
            F PGLVGGHCIGVDPYYLT KAQE+G HPEVIL+GRRIND MA  +AS V++ L ++G  
Sbjct  247  FKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLE  306

Query  301  NASTRVGILGMTFKENVPDIRNSKVVDLYRALGDYGITPLACDPMVDVEQMRHEYGISLV  360
              ++ V +LG+TFKEN PD+RN+KV+++   L +YG+     D   D ++ +  +G+ L+
Sbjct  307  VQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLI  366

Query  361  ERDQFRDMDVLILAVPHRETMDTIWEDLPQLVKAGGMVCDLKSVLDSRRLQSDLLYWTL  419
            +  +++ +DV+++AVPH++ M+    D  +LVK  G+V D+K++++S  L+     W L
Sbjct  367  DTKELKMVDVVLFAVPHKDYMEN-KKDYINLVKDCGIVFDIKGIINSDELNVSQRLWRL  424

274) Cycma_3080 in NC_015914


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  371 bits (1396),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 230/434 (53%), Positives = 327/434 (76%), Gaps = 26/434 (5%)

Query  9    KIAVIGLGYVGLPLAVEFAKKFPVIGFDISSKRVDELNSGHDFTLEVEDKDLQAVLAQSS  68
            +IAV+GLGYVGLP+AV F++K  VIGFDI+  R+ EL++  D T EV ++ L        
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL--------  55

Query  69   PKDKGLFNSNNPDDLADCQVYIVTVPTPTDRHNRPVLTPMLKASETIAKYLKKGDVVIYE  128
             K+  +  ++N++DL   +  I++VPTP D+HN+P L P+LKASET++K +  + +V+YE
Sbjct  56   -KNTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  129  STVYPGVTEEECVPLLEKISGMTFNKDFYAGYSPERINPGDKEHTVAKILKVTSGSTPEI  188
            STVYPG TEEECVP+LEK SG+   KDF+ GYSPERINPGDK HT   I KV SG T E+
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  189  AEYVDSLYREVITAGTHKASSIKVAEAAKVIENSQRDINIAFVNELSKIFNLLDIDTQEV  248
             E V  +Y  V+TAG HKASSIKVAEAAKVIEN+QRD+NIA++NEL+ IF+ LDIDT+EV
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  249  LEAAGTKWNFLPFRPGLVGGHCISVDPFYLAQKAQEVGYHPEIILAGRRLNDSMGKHVAT  308
            L A+GTKWNFL F+PGLVGGHCI+VDP+YL++KAQEVG HPE+ILAGRR+ND+M+K +A+
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  309  EVIKHMMRKDLKVIDSKVLILGFTFKEDCPDVRNTRVIDIYKELRNFDMSVEVYDPWANP  368
            +VIK++++++L V ++ V +LG+TFKE+CPD+RNT+VI+I  EL++++++V V D  A+ 
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  369  EEVKHEYGVEIIGGKQCPPLEEYSAVVLAVAHKEFKTLALEKSKDL--------VVYDVK  420
            +E K  +G+++I+ K+   L     V++AV+HK++    +E+ KD         +V+D+K
Sbjct  355  NEAKKFFGLDLIDTKE---LKMVDVVLFAVPHKDY----MENKKDYINLVKDCGIVFDIK  407

Query  421  AVLPKD--KVDARL  432
            +++  D  +V  RL
Sbjct  408  GIINSDELNVSQRL  421

275) RPB_1553 in NC_007778


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  371 bits (1393),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 222/370 (60%), Positives = 290/370 (79%), Gaps = 2/370 (0%)

Query  2    RKIAVVGLGYVGLPVAIGFARSYQVVGFDVDRVRISELNEGFDRTREVEPDALRGASIKF  61
            R+IAVVGLGYVGLPVA+ F+   +V+GFD++  RI EL++ +DRT EV  + L+ ++I +
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  62   TSVVAELSGCDFYIVAVPTPLDDARRPDLGAMLSASRAVGSVLKKNDIVVYESTVYPGAV  121
            TS   +L   DF I+AVPTP+D   +PDL ++L AS +VG V+  + IVVYESTVYPGA 
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  122  EEECLPVLEQASGLLAGVDFKVGYSPERINPGDKNHRFETITKVVSAQDAESLDIVADVY  181
            EEEC+PVLE+ SGL+ G DF VGYSPERINPGDK H FETITKVVS+Q  E L+IVADVY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  182  GSVVTAGIYRAPSIKVAEAAKVIENTQRDLNIAFMNELALIFQSLEIDTDDVLAAARTKW  241
            +SVVTAG+ +A+SIKVAEAAKVIENTQRD+NIA+MNELA+IF+ L+IDT++VL A+ TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  242  NFLPFQPGLVGGHCIGVDPYYLTFRAEKAGYHPEVILAGRRINDAMGAEIARQCIRRMMR  301
            NFL F+PGLVGGHCIGVDPYYLT +A+  G HPEVILAGRRIND M+  IA + I+ +++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  302  CRY--RSETVTILGLTFKENVPDIRNTKVVDIVRELESFGVAVQICDPWANPGDASREYG  359
                 ++ TV +LGLTFKEN PD+RNTKV++I+ EL  +G+ V + D  A+  +A + +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  360  IEPVDLDKLQ  369
            ++ +D   L+
Sbjct  363  LDLIDTKELK  372

276) AZOBR_p60035 in NC_016597


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  371 bits (1393),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 242/427 (57%), Positives = 323/427 (76%), Gaps = 4/427 (0%)

Query  4    SRRISVIGLGYVGLPVAVAFGRMDVPVVafdidarriaalraGHDHTGEVADTDLAAARL  63
            +R I+V+GLGYVGLPVAV+FG  +  V++FDI+  RI  L+   D+T EV++  L  + +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  64   HLTDDPADLAQADFHIVTVPTPIDDARRPDLRPLLAASRTVGRHLKRGDVVVYESTVYPG  123
            + T ++ DL +ADF I++VPTPID   +PDL PLL AS TVG+ +  + +VVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  ATEMDCVPVLEAESGLTFGRDFTIGYSPERINPGDKEHRFETITKVVSGSDPATRSLVAA  183
            ATE +CVPVLE  SGL  G+DF +GYSPERINPGDK H FETITKVVSG       +VA 
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYGSVVKAGVHEaaslavaeaaKVIENTQRDVNIALMNELAVIFHRMGIDTRDVLAAAGT  243
            VY+SVV AGVH A+S+ VAEAAKVIENTQRDVNIALMNELA+IF++++IDT +VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLKFQPGLVGGHCIGVDPYYLTHRAEQLGHNPEVILAGRRINDTMGQYVAQETVKRL  303
            KWNFL+F+PGLVGGHCIGVDPYYLTH+A+++GH+PEVILAGRRIND M++Y+A + +K L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  LRGRVGASGPLRVTVLGLTFKEDVPDIRNTRVVDIVAELKSFGVEVALHDPLAAADEVAH  363
            L+  +   G+  V VLGLTFKE+ PD+RNT+V++I+ ELK +G++V+++D  A  +E   
Sbjct  301  LKQGLEVQGA-TVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  364  EYGLTLTARdalppadavvlavphaaYRTEGWDLVSGLLKDRRGIVMDVKGLLDRGAVPE  423
             +GL L     L   D V++AVPH  Y  +  D ++ L+KD  GIV D+KG+++ + +  
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKD-CGIVFDIKGIINSDELNV  417

Query  424  GVDLWRL  430
            +  LWRL
Sbjct  418  SQRLWRL  424

277) wbpO in NC_017027


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  371 bits (1393),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 221/408 (55%), Positives = 315/408 (78%), Gaps = 2/408 (0%)

Query  15   YVGLPIAVEFGKKVPTVGFDINEKRVKSLASGKDYTLEVSEEELQHASKLRYTNQTKGLE  74
            YVGLP+AV FG+K   +GFDINE R+K L +  D T EV+E+ L++ +++ YT+++ +L 
Sbjct  12   YVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYTSNAEDLK  70

Query  75   ECNFFIVTVPTPIDHYKQPDLKPLIKASETIAEVLKKGDVVVYESTVYPGATEEICVPVL  134
              +F+I++VPTPID  ++PDL PL+KASET++ V+  + +VVYESTVYPGATEE CVPVL
Sbjct  71   KADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVL  130

Query  135  EKMSGLKFNHDFFVGYSPERINPGDKEHRVTNILKITSGSTPLVANYIDFVYKLIIKAGT  194
            EK SGL    DFFVGYSPERINPGDK H    I K+ SG T  V + +  VY  ++ AG 
Sbjct  131  EKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGV  190

Query  195  HQAPSIKVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEDVLNAAGTKWNFLPFKPG  254
            H+A+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT++VL+A+GTKWNFL FKPG
Sbjct  191  HKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPG  250

Query  255  LVGGHCIGVDPYYLTHKAQSLGLHPEIILAARRLNDRMGEYVTTQLIKEMVKKDIPVVNS  314
            LVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+ Y+++++IKE++K+++ V  +
Sbjct  251  LVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGA  310

Query  315  KILVMGLSFKENCPDIRNTKIIDLVNSLKEYDIDIDIYDPWVDKYEAEAEYGLTPITEIH  374
             + V+GL+FKENCPD+RNTK+I++++ LKEY++++ + D   DK EA   +GL  I   +
Sbjct  311  TVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKE  370

Query  375  SHNYDAIIIAVAHQQFKSMTEKDFKALGKENFVLYDLKYVLEQSQANI  422
                D +++AV+H+++     KD+  L K+  +++D+K +++  + N+
Sbjct  371  LKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

278) Tbd_0098 in NC_007404


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  371 bits (1393),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 221/409 (55%), Positives = 309/409 (76%), Gaps = 7/409 (1%)

Query  20   FGKKTRTVGFDLSREKIEHYRRFCDPTGEVSSDDLKAATHLTVTTDPAALAEADFIVVAV  79
            FG+K + +GFD++  +I + +   D T EV+ + LK  T++  T+++  L  ADFI++AV
Sbjct  21   FGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYTSNAEDLKKADFIIIAV  79

Query  80   PTPVDAAHIPDFSPLVGASTTVGKHMKKGATVIYESTVYPGATEEVCIPILEKNSGMTWR  139
            PTP+D  + PD+ PL+ AS TVGK +  ++ V+YESTVYPGATEE C+P+LEK SG+   
Sbjct  80   PTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCG  139

Query  140  HGFHVGYSPERVNPGDKERTITRIVKVVSGDDAATLDKVAELYGSVITAGVHRASSIKVA  199
             +F VGYSPER+NPGDK +T+  I KVVSG+    L+ VA++Y+SV+TAGVH+ASSIKVA
Sbjct  140  KDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVA  199

Query  200  EAAKVIENTQRDLNIALMNELSLIFHRLGIDTLEVLKAAGTKWNFLPFRPGLVGGHCIGV  259
            EAAKVIENTQRD+NIALMNEL++IF++L+IDT EVLKA+GTKWNFL F+PGLVGGHCIGV
Sbjct  200  EAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGV  259

Query  260  DPYYLTHKADMLGYHPQVILAGRRINDGMGAYVAQETVKKMIAGGVQVKGAKVNVLGLTF  319
            DPYYLTHKA+ +G HP+VILAGRRIND M+ Y+A + +K ++  G++V+GA VNVLGLTF
Sbjct  260  DPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTF  319

Query  320  KENCPDLRNSKVVDVIRELQSFGCEVHVHDPLGESKEAEHEYGIGLTAWEELPACDALVA  379
            KENCPDLRN+KV+++I EL+ +G +V V+D  ++ +EA   +G++L    EL   D ++ 
Sbjct  320  KENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLF  379

Query  380  AVSHAAYLD--KPFAELTATLKKGGTFTDVKSAYDPATVEAAGFALWRL  426
            AV+H  Y++  K + +L   +K  G   D+K+  ++  ++ +   LWRL
Sbjct  380  AVPHKDYMENKKDYINL---VKDCGIVFDIKGIINSDELNVSQ-RLWRL  424

279) GYMC10_2036 in NC_013406


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  371 bits (1393),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 207/385 (54%), Positives = 302/385 (79%), Gaps = 0/385 (0%)

Query  13   KLAVVGLGYVGLPLAVAFSKRLDVIGFDLSEAKVSQYRSGFDATGEIGDDLLAGCAADFT  72
            ++AVVGLGYVGLP+AV+F+++  VIGFD++E+++ + ++ +D T E+ ++ L     ++T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDPDKLKEARCFIVAVPTPVKSGNVPDLKFVRNASRLVGRALTRGAVVVYESTVYPGVTE  132
            S+++ LK A  +I+AVPTP+   N PDL  + +AS  VG+ +T +++VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EVCIPILEEESGLRLGEDFKVGYSPERINPGDQVHRLETIVKIVSGNDPEALETVARLYE  192
            E C+P+LE  SGL  G DF VGYSPERINPGD+VH +ETI K+VSG+  E LE VA +Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LIIEAGVHRAESIRVAEAAKVIENAQRDINIAFMNELSMLFNQMDIDTNAVLRAAETKWN  252
             ++ AGVH+A SI+VAEAAKVIEN+QRD+NIA+MNEL+++F+++DIDTN VL+A+ TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLPFRPGLVGGHCIGIDPYYLTYKAEDTGYHSKIILAGRHINDGMGKYVAQHVIKLAIRQ  312
            FL F+PGLVGGHCIG+DPYYLT KA++ G H+ +ILAGR+IND M+KY+A +VIK  ++Q
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GIDLMKAKVAVMGLSFKEDCRDIRNSKVIDIIRELQDYGIRPMVADPHVDPKQAYEEYGI  372
            G+++  A V V+GL+FKE+C D+RN+KVI+II EL++YG+   V D + D ++A   +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELSDMSELSGIQIAVVAVAHREFKQ  397
            +L D  EL  +++ + AV+H+++ +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME  388

280) BSn5_04355 in NC_014976


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 218/385 (57%), Positives = 304/385 (79%), Gaps = 4/385 (1%)

Query  13   KVSVIGLGYVGLPLAISLGKYFKVIGFDISEDKIKNYLKGKKY--TYEVEREKIKNSDIL  70
            +++V+GLGYVGLP+A+++G+  KVIGFDI+E +IK+ LK ++Y  T EV  +K+KN++I 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKE-LK-NNYDRTNEVTENKLKNTNIE  61

Query  71   FTYNEKELLDSRFHIIAVPTPINLNKTPDLSPLKEASSIVGRNLKKDSIVVYESTVYPGV  130
            +T N  +L  + F IIAVPTPI+ ++ PDL PL  AS  VG+ +  D+IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  131  TEEICAPILEKESGLKCGIDFKIGYSPERINPGDDHHNLENVTKVVAGMDRESLNIISQV  190
            TEE C P+LEK SGL CG DF +GYSPERINPGD  H +E +TKVV+G   E L+I+++V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  191  YKTIVKAGVYRAKSIKVAESAKVIENSQRDINIAFMNELSIIFNKMGIDTKSVLEAAKTK  250
            Y ++V AGV +A SIKVAE+AKVIEN+QRD+NIA+MNEL+IIF+K++IDT+ VL A+ TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  251  WNFMDFSPGLVGGHCIGIDPYYLTYKAEEIGYHSQIILAGRKINDSMGKYVAENTIKMLL  310
            WNF++F PGLVGGHCIG+DPYYLT KA+E+G H+++ILAGR+IND+M+KY+A N IK LL
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  311  KAGKNIKGARIAVFGVTFKENCPDIRNSLVVNTIRELQEYETNIKVVDPIANADDLWDEY  370
            K G +++GA + V+G+TFKENCPD+RN+ V++ I EL+EY  N+ V D  A+ ++    +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  371  RIKLNDINDIKNMDCIIFAVPHNIF  395
             + L D +++K +D ++FAVPH+ +
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDY  386

281) Theam_0601 in NC_014926


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  370 bits (1392),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 228/423 (54%), Positives = 326/423 (78%), Gaps = 3/423 (0%)

Query  16   KVAVVGLGYVGLPLAVLLGRKFKVVGFDVNPERVAQLKAGIDKTGEVSREAIEEASVEFT  75
            ++AVVGLGYVGLP+AV +G K KV+GFD+N  R+ +LK   D+T EV+ + + ++++E+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  76   TEPEELSGCRLIIVTVPTPVDRHNIPDLRPVKLATKTVGRHMVPGTVVVYESTVYPGLTE  135
            +++E+L    +II++VPTP+D+HN PDL P+  A+ TVG+ + P+T+VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  136  EVCVPLLEKESGLKYMEEFKVGYSPERVNPGDKKHTIEKIVKVVAGCDDETADLLEKVYG  195
            E CVP+LEK SGL    +F VGYSPER+NPGDK HT+E I KVV+G   E  +++  VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  196  SVIEAGVYRAPNIKTAEAAKVIENTQRDLNIALMNELALIFHRMGIDTRDVIEAAATKWN  255
            SV+ AGV +A++IK AEAAKVIENTQRD+NIALMNELA+IF++++IDT +V+ A++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  256  FLKFEPGLVGGHCIGVDPYYLTFKAQELGYHPEVILAGRRINDYMGKFVAEQTVKQMIKA  315
            FL+F PGLVGGHCIGVDPYYLT KAQE+G HPEVILAGRRIND M+K++A + +K+++K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  316  GKQVLNAKVLVMGVTFKENVKDVRNSKVIDIYNELNSYGVKAFLYDPVADGEEFKREYGV  375
            G +V  A V V+G+TFKEN  D+RN+KVI+I +EL+ YG++  + D  AD +E K+ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  376  ELIESVEAEAPYDAVVVAVKHDSFKELPPEFFRSILGEPPILIDVKGIYNRERFK-DFLL  434
            +LI++ E     D V+ AV H  + E   +++ +++ +  I++D+KGI N + ++    L
Sbjct  364  DLIDTKELKMV-DVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNVSQRL  421

Query  435  WRL  437
            WRL
Sbjct  422  WRL  424

282) VAPA_1c53900 in NC_022247


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  370 bits (1391),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 219/387 (57%), Positives = 299/387 (78%), Gaps = 3/387 (0%)

Query  10   KLAIIGLGYVGLPLAVAFGKLMPVLGFDVDTRRIEDLRVGYDRTLETEASDLSAAKL-FT  68
            ++A++GLGYVGLP+AV+FG+   V+GFD++  RI +L+  YDRT E   + L  +++ +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  69   PTSDVADLFGCNVFIVAVPTPVDSANRPDLGPLLSASETVASVMPSGAIVIYESTVYPGA  128
            + ++  DL   + +I+AVPTP+D  N+PDL PLL ASETV+ V+ +++IV+YESTVYPGA
Sbjct  64   SNAE--DLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  129  TEEVCVPVLEKVSNKVFNRDFFCGYSPERVNPGDKVNTLTKIRKITSGSTPEIADIVDRL  188
            TEE CVPVLEK S  V  +DFF GYSPER+NPGDKV+T+  I K+ SG T E+ +IV  +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  189  YSRIVTAGTYKAGSLKVAEAAKVIENTQRDLNIALMNELSVLFERLGIDTLEVLEAAGSK  248
            YS +VTAG  KA+S+KVAEAAKVIENTQRD+NIALMNEL+++F++L+IDT EVL A+G+K
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  249  WNFLPFRPGLVGGHCIGVDPYYLTYKAEQVGYIPQIILAGRRINDNMARYAARNTIKLML  308
            WNFL F+PGLVGGHCIGVDPYYLT KA++VG  P++ILAGRRINDNMA+Y A N IK +L
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  309  QAGMDVARCKIGVMGITFKENCPDIRNSKVVDLIRELQAWGAQVVVADPWANAEEVQAEY  368
            + G++V    + V+G+TFKENCPD+RN+KV+++I EL+  G +V V D  A+ +E +  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  369  SLKLDVIDEHNPVDALVVAVGHAEYRE  395
            +L L    E + VD ++ AV H +Y E
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME  388

283) CT0227 in NC_002932


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1387),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 219/382 (58%), Positives = 302/382 (80%), Gaps = 14/382 (3%)

Query  1    MDKTRIALIGLGYVGLPLAVEFAKKFPVAGFDIKQERIEELNNGCDSTLEVDAEALGAVL  60
            M++  IA++GLGYVGLP+AV F++K  V GFDI++ RI EL+N  D T EV  + L    
Sbjct  1    MNRN-IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK---  56

Query  61   TASNPLTADGDKGLFVTSSIAEIAKANIYIVTVPTPTDKHNRPVLTPLIRASETVGQVLE  120
             ++   T++++          ++ KA++ I++VPTP DKHN+P L PL++ASETVG+V+ 
Sbjct  57   NTNIEYTSNAE----------DLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVIT  106

Query  121  KGDIVIYESTVYPGATEEDCVPVLERVSGLTFNRDFFVGYSPERINPGDKEHTVTKIKKV  180
             + IV+YESTVYPGATEE+CVPVLE+ SGL   +DFFVGYSPERINPGDK HT   I KV
Sbjct  107  PDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKV  166

Query  181  TSGSTPEAARKIDELYASVITAGTHLASSIRVAEAAKVIENSQRDINIAFVNELAMIFNR  240
             SG T E    + ++Y+SV+TAG H ASSI+VAEAAKVIEN+QRD+NIA++NELA+IF++
Sbjct  167  VSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDK  226

Query  241  MGIDTLDVLRAAGTKWNFLPFRPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLND  300
            ++IDT +VL+A+GTKWNFL F+PGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND
Sbjct  227  LDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRIND  286

Query  301  NMGRYVASEVVKLMISRDLKVKGSKVLMLGITFKENCPDIRNTRAVDIVAELREYGAQVH  360
            NM++Y+AS+V+K ++ ++L V+G+ V +LG+TFKENCPD+RNT+ ++I+ EL+EYG +V 
Sbjct  287  NMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVT  346

Query  361  IHDPWANPEEVRHEYGLDCIDA  382
            ++D  A+ +E +  +GLD ID+
Sbjct  347  VNDVEADKNEAKKFFGLDLIDT  368

284) Dde_3187 in NC_007519


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1387),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 222/403 (56%), Positives = 307/403 (77%), Gaps = 4/403 (0%)

Query  35   RVIGFDISQRRVDALIKGEDATGEVENSRLAACKAEFTADPARIGQADIVIVAVPTPIDG  94
            +VIGFDI++ R+  L +  D T EV +++L   + E+T+++  + +AD++I+AVPTPID 
Sbjct  26   KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIAVPTPIDK  85

Query  95   NRRPDLFPVESASRTVGRTMKKGCVVVYESTVYPGLTEEICVPILEKESGMKFGTDFTVG  154
            + +PDL+P+  AS TVG+ +  + +VVYESTVYPG TEE CVP+LEK SG+  G DF VG
Sbjct  86   HNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVG  145

Query  155  YSPERINPGDKVHTLETIVKVVSGSDEATADLLQRMYGTVVTAGTFRASSIRVAEAAKVI  214
            YSPERINPGDKVHT+ETI KVVSG      +++  +Y++VVTAG  +ASSI+VAEAAKVI
Sbjct  146  YSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVI  205

Query  215  ENTQRDLNIALMNELALLFDRMDIDTLEVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLT  274
            ENTQRD+NIALMNELA++FD++DIDT EVL A+GTKWNFL F+PGLVGGHCIGVDPYYLT
Sbjct  206  ENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLT  265

Query  275  FKAEALGHHPQVILAGRRINDGMGKFVAETCVKKMIRKGNVVAGSRVGVLGLTFKENVPD  334
             KA+ +GHHP+VILAGRRIND M+K++A   +K ++++G  V G+ V VLGLTFKEN PD
Sbjct  266  HKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPD  325

Query  335  LRNTRVVDVIDELRDYGVHVLVHDPQADPAEAHEEYGLTLTGLDTLRELDAVILAVPHAE  394
            LRNT+V+++I+EL++YG++V V+D +AD  EA   +GL L +   L+ +D V++AVPH +
Sbjct  326  LRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKD  385

Query  395  YDALQAQDIRGWFRDPQKALLLDIKGAKSPAAFTDAGFDYWRL  437
            Y   + +D     +D   ++++DIKG  ++  +  +    WRL
Sbjct  386  YME-NKKDYINLVKDC--GIVFDIKGIINSDELNVSQ-RLWRL  424

285) wbpO in NC_017025


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1388),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 232/425 (55%), Positives = 320/425 (76%), Gaps = 14/425 (3%)

Query  1    MKIKIAIIGLGYVGLPLARLFATKYPVIGFDINKQRISELNQGIDLTLEVDQELLQSVLK  60
            M+ +IA++GLGYVGLP+A  F+ K  VIGFDIN  RI EL++  D T EV ++ L++   
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT--  58

Query  61   THNSTLTTNYLYCSDNLEDIADCNYYIVTVPTPVDKHNKPDLTPLYKASETVAKVLKKGD  120
                    +Y   + N ED+   ++ I++VPTP+DKHNKPDL PL KASETV+KV+  + 
Sbjct  59   ------NIEY---TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDT  109

Query  121  TVIYESTVYPGVTEEECVPVLEKLSGLKFNVDFFAGYSPERINPGDKEHTVEKILKVTAG  180
             V+YESTVYPG TEEECVPVLEK SGL    DFF GYSPERINPGDK HT E I KV +G
Sbjct  110  IVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSG  169

Query  181  STPEVGLKVDALYKSVITAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNILEI  240
             T EV   V  +Y SV+TAG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF+ L+I
Sbjct  170  QTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDI  229

Query  241  DTQAVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAMEAGYHPEIILAGRRMNDSMG  300
            DT+ VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KA E G HPE+ILAGRR+ND+M+
Sbjct  230  DTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMA  289

Query  301  EYVASEVVKLMIKKEIVLHKAEVLLLGITFKENCPDVRNTKIVDIVHALKEYGINITIYD  360
             Y+AS+V+K ++K+ + ++ A V +LG+TFKENCPD+RNTK+++I++ LKEYG+N+T+ D
Sbjct  290  KYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVND  349

Query  361  PWAKPEEVKHEYGIDCSSELDSKSKFDALILGVAHNEFLEIDTT--SILKETNVIYDVKG  418
              A  +E K  +G+D     + K   D ++++V+H++++E      +++K+  +++D+KG
Sbjct  350  VEADKNEAKKFFGLDLIDTKELK-MVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKG  408

Query  419  FLKTE  423
            +++++
Sbjct  409  IINSD  413

286) NT08PM_0224 in NC_017764


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1387),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 222/408 (55%), Positives = 315/408 (78%), Gaps = 2/408 (0%)

Query  15   YVGLPIAVEFGKKVPTVGFDINEKRVKSLASGKDYTLEVSEEELQHASKLRYTNQTKGLE  74
            YVGLP+AV FG+K   +GFDINE R+K L +  D T EV+E+ L++ +++ YT+++ +L 
Sbjct  12   YVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYTSNAEDLK  70

Query  75   ECNFFIVTVPTPIDHYKQPDLKPLIKASETIAEVLKKGDVVVYESTVYPGATEEICVPVL  134
              +F+I++VPTPID  ++PDL PL+KASET++ V+  + +VVYESTVYPGATEE CVPVL
Sbjct  71   KADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVL  130

Query  135  EKMSGLKFNHDFFVGYSPERINPGDKEHRVTNILKITSGSTPLVANYIDFVYKLIIKAGT  194
            EK SGL    DFFVGYSPERINPGDK H    I K+ SG T  V + +  VY  ++ AG 
Sbjct  131  EKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGV  190

Query  195  HQAPSIKVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEDVLNAAGTKWNFLPFKPG  254
            H+A+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT++VL+A+GTKWNFL FKPG
Sbjct  191  HKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPG  250

Query  255  LVGGHCIGVDPYYLTHKAQSLGLHPEIILAARRLNDRMGEYVATQLIKEMVKKDIPVVNS  314
            LVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+ Y+A+++IKE++K+++ V  +
Sbjct  251  LVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGA  310

Query  315  KILVMGLSFKENCPDIRNTKIIDLVNSLKEYDIDIDIYDPWVDKYEAEAEYGLTPITEIH  374
             + V+GL+FKENCPD+RNTK+I++++ LKEY++++ + D   DK EA   +GL  I   +
Sbjct  311  TVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKE  370

Query  375  SHNYDAIIIAVAHQQFKCMTEKDFKALGKENFVLYDLKYVLDQSQANI  422
                D +++AV+H+++     KD+  L K+  +++D+K +++  + N+
Sbjct  371  LKMVDVVLFAVPHKDYM-ENKKDYINLVKDCGIVFDIKGIINSDELNV  417

287) PM1003 in NC_002663


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1388),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 222/408 (55%), Positives = 315/408 (78%), Gaps = 2/408 (0%)

Query  15   YVGLPIAVEFGKKVPTVGFDINEKRVKSLASGKDYTLEVSEEELQHASKLRYTNQTKGLE  74
            YVGLP+AV FG+K   +GFDINE R+K L +  D T EV+E+ L++ +++ YT+++ +L 
Sbjct  12   YVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYTSNAEDLK  70

Query  75   ECNFFIVTVPTPIDHYKQPDLNPLIKASETIAEVLKKGDVVVYESTVYPGATEEICVPVL  134
              +F+I++VPTPID  ++PDL PL+KASET++ V+  + +VVYESTVYPGATEE CVPVL
Sbjct  71   KADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVL  130

Query  135  EKMSGLKFNHDFFVGYSPERINPGDKEHRVTNILKITSGSTPLVANYIDFVYKLIIKAGT  194
            EK SGL    DFFVGYSPERINPGDK H    I K+ SG T  V + +  VY  ++ AG 
Sbjct  131  EKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGV  190

Query  195  HQAPSIKVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEDVLNAAGTKWNFLPFKPG  254
            H+A+SIKVAEAAKVIENTQRDVNIAL+NELA+IF+K++IDT++VL+A+GTKWNFL FKPG
Sbjct  191  HKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPG  250

Query  255  LVGGHCIGVDPYYLTHKAQSLGLHPEIILAARRLNDRMGEYVATQLIKEMVKKDIPVVNS  314
            LVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+ Y+A+++IKE++K+++ V  +
Sbjct  251  LVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGA  310

Query  315  KILVMGLSFKENCPDIRNTKIIDLVNSLKEYDIDIDIYDPWVDKYEAEAEYGLTPITEIH  374
             + V+GL+FKENCPD+RNTK+I++++ LKEY++++ + D   DK EA   +GL  I   +
Sbjct  311  TVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKE  370

Query  375  SHNYDAIIIAVAHQQFKCMTEKDFKALGKENFVLYDLKYVLDQSQANI  422
                D +++AV+H+++     KD+  L K+  +++D+K +++  + N+
Sbjct  371  LKMVDVVLFAVPHKDYM-ENKKDYINLVKDCGIVFDIKGIINSDELNV  417

288) Celly_2638 in NC_015167


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1388),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 226/428 (53%), Positives = 321/428 (75%), Gaps = 14/428 (3%)

Query  2    QKIAIIGLGYVGLPLARLFAVKYPVIGFDINKTRVAELKSGVDSTLEVDNSTLKKVLSEN  61
            ++IA++GLGYVGLP+A  F+ K  VIGFDIN +R+ ELK+  D T EV ++ LK+     
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-----  57

Query  62   INMKTGLFCSDNKKDIEDCNYYIVTVPTPVDKNNRPILTPLYKSSETVGKVLKKGDTVIY  121
                T +  + N  D+   ++ I++VPTP+DK+N+P L PL K+SETVGKV+  +  V+Y
Sbjct  58   ----TNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVY  113

Query  122  ESTVYPGVTEDECVPILEKFSGLKFNVDFFVGYSPERINPGDKEHTVDKILKVTSGSTPD  181
            ESTVYPG TE+ECVP+LEK+SGL    DFFVGYSPERINPGDK HT + I KV SG T +
Sbjct  114  ESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLE  173

Query  182  AGKKIDNLYKSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNLMNIDTND  241
                + ++Y SV+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ ++IDTN+
Sbjct  174  VLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNE  233

Query  242  VLKAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDGMGNYIA  301
            VLKA+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND M++YIA
Sbjct  234  VLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIA  293

Query  302  SEIVKLMIQNDIKIKGANILILGVTFKENCPDVRNTKVVDVIRNLTSYNANLDIYDPWAS  361
            S+++K ++++++ ++GA + +LG+TFKENCPD+RNTKV+++I +L  Y  N+ + D  A 
Sbjct  294  SNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEAD  353

Query  362  PEEVLKEYNLNTTQEIPNKTYDAIVLTVAHKEFLTLDIE--KLKNKDGIIYDVKGQLKK-  418
             +E  K + L+  +    K  D ++++V+HK+++    +  +L +  GI++D+KG ++  
Sbjct  354  KNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

Query  419  --NVNKRL  424
              NV++RL
Sbjct  414  ELNVSQRL  421

289) TREPR_0345 in NC_015578


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1385),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 222/411 (55%), Positives = 311/411 (76%), Gaps = 5/411 (1%)

Query  5    KVAVLGLGYVGLPLARLFSTKYPTVGFDINSERVKALLTGHDTTLEITDELLQSALRDGF  64
            ++AV+GLGYVGLP+A  F+ K   +GFDIN  R+K L    D T E+T++ L+++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  65   ICTSTIDDIRECNFYIVAVPTPVDKNNNPDLTPLYKASEVVGAVISNGDIVVYESTVYPG  124
              TS  +D++  +F I+AVPTP+DK+N+PDL PL KASE VG VI+ + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  VTEEECIPIVERISGLRFNQDFFAGYSPERINPGDKLHTVEKIKKITSGSTYESGKKINE  184
             TEEEC+P++E+ SGL   +DFF GYSPERINPGDK+HT E I K+ SG T E    + +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  VYASVIEAGTHLAPSIKVAEAAKVIENAQRDINIAFVNELSKIFNLMEIDTHDVLEAAGT  244
            VY+SV+ AG H A+SIKVAEAAKVIEN+QRD+NIA++NEL+ IF+ ++IDT++VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLSFKPGLVGGHCIGVDPYYLAQCAQNYGYHPEIILAGRRTNDGMGEYVANQVIKLM  304
            KWNFL+FKPGLVGGHCIGVDPYYL++ AQ+ G HPE+ILAGRR ND M+ Y+A++VIK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  IKKQLNVLNSNILILGFTFKENCPDVRNTRVIDIYNVFKEYNINTTIYEPLADKAIVKHE  364
            +K+ L+V  + + +LG+TFKENCPD+RNT+VI+I + +KEY +N T+ +  ADK   K  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YNIDIIKECPTQKFDGVVLAVGHKIF--DTIDVLSLLKTSHVVYDAKAVLD  413
            + +D+I     +  D V++AV HK +  +  D ++L+K   +V+D K++++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIIN  411

290) G148_0867 in NC_020125


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1385),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 223/424 (53%), Positives = 321/424 (76%), Gaps = 14/424 (3%)

Query  2    KKIAIIGLGYVGLPLARLFATKYPVVGFDINQERVAKLNQGHDDTLEVADDILQAALVQE  61
            ++IA++GLGYVGLP+A  F+ K  V+GFDIN+ R+  L++  D T EV+++ L+ + ++ 
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE-  61

Query  62   NPFPTGKIGLYCSADLKDIQDATIYIITVPTPVDKNNRPVLTPLVKASETVGQVLKKGDI  121
                        +++  D++ A + II+VPTP+DK+N+P L PL+KASETVG+V+  + I
Sbjct  62   -----------YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTI  110

Query  122  VIYESTVYPGATEEDCIPVLERVSGLKFNEDFYAGYSPERINPGDKEHTVEKILKVTSGS  181
            V+YESTVYPGATEE+C+PVLE+ SGL    DF+ GYSPERINPGDK HT E I KV SG 
Sbjct  111  VVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQ  170

Query  182  TPEIGKEVDGLYKSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNLMGID  241
            T E+   V ++Y SV+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ ++ID
Sbjct  171  TLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDID  230

Query  242  THAVLAAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSMGK  301
            T+ VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M+K
Sbjct  231  TNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAK  290

Query  302  YVAEQVVKAMIKKDIPVNNAEVLMLGITFKENCPDVRNTKIVDVIAALEDFGVKVTTYDP  361
            Y+A +V+K ++K+++ V+ A V +LG+TFKENCPD+RNTK++++I  L ++G++VT  D 
Sbjct  291  YIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDV  350

Query  362  WANPEEVLHEYGIESTKKLPSQKFDAVILGVAHKEFKEL--DLSSLKKNNAVVYDVKGIL  419
             A+ +E    +G++       +  D V+++V+HK++ E   D  +L K+ ++V+D+KGI+
Sbjct  351  EADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGII  410

Query  420  NESD  423
            N  +
Sbjct  411  NSDE  414

291) RIA_1493 in NC_017569


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1385),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 223/424 (53%), Positives = 321/424 (76%), Gaps = 14/424 (3%)

Query  2    KKIAIIGLGYVGLPLARLFATKYPVVGFDINQERVAKLNQGHDDTLEVADDILQAALVQE  61
            ++IA++GLGYVGLP+A  F+ K  V+GFDIN+ R+  L++  D T EV+++ L+ + ++ 
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE-  61

Query  62   NPFPTGKIGLYCSADLKDIQDATIYIITVPTPVDKNNRPVLTPLVKASETVGQVLKKGDI  121
                        +++  D++ A + II+VPTP+DK+N+P L PL+KASETVG+V+  + I
Sbjct  62   -----------YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTI  110

Query  122  VIYESTVYPGATEEDCIPVLERVSGLKFNEDFYAGYSPERINPGDKEHTVEKILKVTSGS  181
            V+YESTVYPGATEE+C+PVLE+ SGL    DF+ GYSPERINPGDK HT E I KV SG 
Sbjct  111  VVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQ  170

Query  182  TPEIGKEVDGLYKSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNLMGID  241
            T E+   V ++Y SV+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ ++ID
Sbjct  171  TLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDID  230

Query  242  THAVLAAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSMGK  301
            T+ VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M+K
Sbjct  231  TNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAK  290

Query  302  YVAEQVVKAMIKKDIPVNNAEVLMLGITFKENCPDVRNTKIVDVIAALEDFGVKVTTYDP  361
            Y+A +V+K ++K+++ V+ A V +LG+TFKENCPD+RNTK++++I  L ++G++VT  D 
Sbjct  291  YIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDV  350

Query  362  WANPEEVLHEYGIESTKKLPSQKFDAVILGVAHKEFKEL--DLSSLKKNNAVVYDVKGIL  419
             A+ +E    +G++       +  D V+++V+HK++ E   D  +L K+ ++V+D+KGI+
Sbjct  351  EADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGII  410

Query  420  NESD  423
            N  +
Sbjct  411  NSDE  414

292) Cpin_4734 in NC_013132


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  369 bits (1385),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 219/423 (52%), Positives = 323/423 (77%), Gaps = 16/423 (3%)

Query  2    IAVIGLGYVGLPLAIEFARKYKVLGFDINAARVHELCNEQDKTREADIDALREVLKQGAN  61
            IAV+GLGYVGLP+A+ F+ K KV+GFDIN +R+ EL N+ D+T E   + L++       
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-------  57

Query  62   TDASVSGGLQLSSDKNDLKACQIYIVTVPTPIDQFKSPDLTFLLGASAMLGTVLKPGDIV  121
                    ++ +S+ +DLK  ++ I++VPTPID+ + PDL  LL AS  +G V+ P+ IV
Sbjct  58   ------TNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIV  111

Query  122  IYESTVYPGCTEDDCVPVLEAHSGLRYNQDFFVGYSPERINPGDKVNTLTKIKKVTSGST  181
            +YESTVYPG TE++CVPVLE  SGL   +DFFVGYSPERINPGDKV+T+  I KV SG T
Sbjct  112  VYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQT  171

Query  182  PEIATRIDELYASIITAGTHKAPSIKVAEASKAIENAQRDVNISFVNELALIFDRIGIDT  241
             E+   + ++Y+S++TAG HKA+SIKVAEA+K IEN+QRDVNI+++NELA+IFD+++IDT
Sbjct  172  LEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDT  231

Query  242  NDVIEAAATKWNFLKYKPGLVGGHCIGVDPYYLAHKAESLGYHPQVILSGRRVNDQMGYF  301
            N+V+ A++TKWNFL++KPGLVGGHCIGVDPYYL+HKA+ +G HP+VIL+GRR+ND+M+ +
Sbjct  232  NEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKY  291

Query  302  VASKVVKLMIEKDHKIKGAHALIMGITFKENCPDVRNTRVVDIYHELKQYGLDVTVYDPW  361
            +AS+V+K ++ ++  ++GA   ++G+TFKENCPD+RNT+V++I +ELK+YGL+VTV D  
Sbjct  292  IASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVE  351

Query  362  ADPEEVKKEYGVPTVTKLEGTEVFDAMVIAVAHREFLSF--DFKKFGSSNAVIFDTKACI  419
            AD +E KK +G+  +   E   + D +++AV+H++++    D+ ++    +++FD K+ I
Sbjct  352  ADKNEAKKFFGLDLIDTKE-LKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGII  410

Query  420  DRD  422
            + D
Sbjct  411  NSD  413

293) wbpO in NC_016940


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  368 bits (1383),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 226/424 (54%), Positives = 323/424 (77%), Gaps = 3/424 (0%)

Query  9    EKKLAVIGLGYVGLPIALAFAKKLSVIGFDINAERVAQMQQQQDPSKELDAQAFEGADIV  68
            ++++AV+GLGYVGLP+A++F++K  VIGFDIN  R+ +++++ D ++E+  + +  ++I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  69   FSHELEDLRQAHFYVVAVPTPIDSHRSPNLHPLLSASKTVGQVLKKGDYVVFESTVYPGC  128
            ++ + EDL++A+F ++AVPTPID H  P+L PLL AS TVG+V+  +  VV+ESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  129  TEEDCVPILEAESGLKAGLDFKVGYSPERINPGDKERTIEKIVKVVSGNDEEALENIAQT  188
            TEE+CVP+LE  SGL  G DF VGYSPERINPGDK +T+E I KVVSG+  E LE +A+ 
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  189  YELIIEAGVHRASSIKVAEAAKVIENTQRDLNIALMNELSIIFDKMDINTYEVLKAAGTK  248
            Y  ++ AGVH+ASSIKVAEAAKVIENTQRD+NIALMNEL+IIFDK+DI+T EVLKA+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  249  WNFLNFYPGLVGGHCIGVDPYYLTYKAQQLNYNPQVILSGRRINDNMAEYVAKKALQFIL  308
            WNFLNF PGLVGGHCIGVDPYYLT KAQ++  +P+VIL+GRRINDNMA Y+A + ++ +L
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  309  QTDTHPKSAKVLVKGITFKENVADIRNSKVADLIAALKDYALQVEVVDPYAAADEVAHEY  368
            + + + ++A V V G+TFKEN +D+RN+KV ++I  LK+Y+L+V V D  A  +E    +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  369  GIELAQEVGTDY-DVVIVAVAHEEYKQLDAAYFRSISKEGAPILDLKNLYANWAEDLPLR  427
            G++L +       DVV+ AV+H +Y +    Y+ ++ K+ + ++D+K +  +   +++ R
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNVSQR  420

Query  428  -WTL  430
             W L
Sbjct  421  LWRL  424

294) vipA in NC_016808


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  368 bits (1382),  Expect = 4e-103, Method: Compositional matrix adjust.
 Identities = 220/408 (54%), Positives = 314/408 (77%), Gaps = 2/408 (0%)

Query  15   YVGLPIAVEFGKKVPTVGFDINEKRVKSLASGKDYTLEVSGEELQHASKLRYTNQTKGLE  74
            YVGLP+AV FG+K   +GFDINE R+K L +  D T EV+ + L++ +++ YT+++ +L 
Sbjct  12   YVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEYTSNAEDLK  70

Query  75   ECNFFIVTVPTPIDHYKQPDLKPLIKASETIAEVLKKGDVVVYESTVYPGATEEICVPVL  134
              +F+I++VPTPID  ++PDL PL+KASET++ V+  + +VVYESTVYPGATEE CVPVL
Sbjct  71   KADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVL  130

Query  135  EKMSGLKFNHDFFVGYSPERINPGDKEHRVTNILKITSGSTPLVANYIDFVYKLIIKAGT  194
            EK SGL    DFFVGYSPERINPGDK H    I K+ SG T  V + +  VY  ++ AG 
Sbjct  131  EKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGV  190

Query  195  HQAPSIKVAEAAKVIENTQRDVNIALINELTLIFNKMGIDTEDVLNAAGTKWNFLPFKPG  254
            H+A+SIKVAEAAKVIENTQRDVNIAL+NEL++IF+K++IDT++VL+A+GTKWNFL FKPG
Sbjct  191  HKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPG  250

Query  255  LVGGHCIGVDPYYLTHKAQSLGLHPEIILAARRLNDRMGEYVATQLIKEMVKKDIPVVNS  314
            LVGGHCIGVDPYYLTHKAQ +G HPE+ILA+RR+ND M+ Y+A+++IKE++K+++ V  +
Sbjct  251  LVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGA  310

Query  315  KILVMGLSFKENCPDIRNTKIIDLVNSLKEYDIDIDIYDPWVDKYEAEAEYGLTPITEIH  374
             + V+GL+FKENCPD+RNTK+I++++ LKEY++++ + D   DK EA   +GL  I   +
Sbjct  311  TVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKE  370

Query  375  SHNYDAIIIAVAHQQFKCMTEKDFKALGKENFVLYDLKYVLDQSQANI  422
                D +++AV+H+++     KD+  L K+  +++D+K +++  + N+
Sbjct  371  LKMVDVVLFAVPHKDYM-ENKKDYINLVKDCGIVFDIKGIINSDELNV  417

295) RA0C_0994 in NC_017045


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  367 bits (1380),  Expect = 5e-103, Method: Compositional matrix adjust.
 Identities = 223/423 (53%), Positives = 318/423 (76%), Gaps = 14/423 (3%)

Query  1    MKNKIAIIGLGYVGLPLARLFATKYSVVGFDINKERVAKLNQGHDDTLEVADDILQAALV  60
            M+ +IA++GLGYVGLP+A  F+ K  V+GFDIN  R+  L++  D T EV+++ L+ + +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  61   QENPFPTGKIGLYCSADLNDIQDANVYIITVPTPVDKNNRPVLTPLIRASETVGKVLKKG  120
            +             +++ +D++ A+  II+VPTP+DK+N+P L PL++ASETVGKV+  +
Sbjct  61   E------------YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPD  108

Query  121  DIVIYESTVYPGVTEEDCIPVLERVSGLKFNEDFYAGYSPERINPGDKEHTVEKILKVTS  180
             IV+YESTVYPG TEE+C+PVLE+ SGL    DF+ GYSPERINPGDK HT E I KV S
Sbjct  109  TIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVS  168

Query  181  GSTSEIGRIVDELYKSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFSLMG  240
            G T E+  IV ++Y SV+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF  ++
Sbjct  169  GQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLD  228

Query  241  IDTHAVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSM  300
            IDT+ VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M
Sbjct  229  IDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNM  288

Query  301  GKYVAEQVVKAMIKKDIPVNNAEVLMLGVTFKENCPDVRNTKIVDVIAALEDFGVKVTTY  360
            +KY+A +V+K ++K+++ V+ A V +LG+TFKENCPD+RNTK++++I  L ++G++VT  
Sbjct  289  AKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVN  348

Query  361  DPWACPEEVKHEYGIESTKNLPSQKFDAVVLGVAHREF--KTLDLSLLKKDNVVVYDVKG  418
            D  A  +E K  +G++       +  D V+++V+H+++  +  D   L KD  +V+D+KG
Sbjct  349  DVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKG  408

Query  419  ILS  421
            I++
Sbjct  409  IIN  411

296) Riean_0757 in NC_014738


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  367 bits (1380),  Expect = 5e-103, Method: Compositional matrix adjust.
 Identities = 223/423 (53%), Positives = 318/423 (76%), Gaps = 14/423 (3%)

Query  1    MKNKIAIIGLGYVGLPLARLFATKYSVVGFDINKERVAKLNQGHDDTLEVADDILQAALV  60
            M+ +IA++GLGYVGLP+A  F+ K  V+GFDIN  R+  L++  D T EV+++ L+ + +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  61   QENPFPTGKIGLYCSADLNDIQDANVYIITVPTPVDKNNRPVLTPLIRASETVGKVLKKG  120
            +             +++ +D++ A+  II+VPTP+DK+N+P L PL++ASETVGKV+  +
Sbjct  61   E------------YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPD  108

Query  121  DIVIYESTVYPGVTEEDCIPVLERVSGLKFNEDFYAGYSPERINPGDKEHTVEKILKVTS  180
             IV+YESTVYPG TEE+C+PVLE+ SGL    DF+ GYSPERINPGDK HT E I KV S
Sbjct  109  TIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVS  168

Query  181  GSTSEIGRIVDELYKSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFSLMG  240
            G T E+  IV ++Y SV+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF  ++
Sbjct  169  GQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLD  228

Query  241  IDTHAVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSM  300
            IDT+ VL A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M
Sbjct  229  IDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNM  288

Query  301  GKYVAEQVVKAMIKKDIPVNNAEVLMLGVTFKENCPDVRNTKIVDVIAALEDFGVKVTTY  360
            +KY+A +V+K ++K+++ V+ A V +LG+TFKENCPD+RNTK++++I  L ++G++VT  
Sbjct  289  AKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVN  348

Query  361  DPWACPEEVKHEYGIESTKNLPSQKFDAVVLGVAHREF--KTLDLSLLKKDNVVVYDVKG  418
            D  A  +E K  +G++       +  D V+++V+H+++  +  D   L KD  +V+D+KG
Sbjct  349  DVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKG  408

Query  419  ILS  421
            I++
Sbjct  409  IIN  411

297) Elen_1917 in NC_013204


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  367 bits (1378),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 207/426 (49%), Positives = 319/426 (75%), Gaps = 5/426 (1%)

Query  13   KLSLIGLGYVGMPIAVEFAKHIEVVGFDVNEEKIRLYRKGVDPTKEVGDEAISSTGVDFT  72
            +++++GLGYVG+P+AV F++   V+GFD+NE +I+  ++  D T+EV ++ + +T +++T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SNPERLREARFHIVAVPTPINQDKTPDLSPVVGASTMLGRHLEWGSIVVFESTVYPGVTE  132
            SN+E L+ A F I+AVPTPI++++ PDL P++ AS  +G+ +  ++IVV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCVPILERESGLRCGVDFKVGYSPERINPGDKVHTLTTIRKIVSGMDDESLEEIKRVYD  192
            + CVP+LE+ SGL CG DF VGYSPERINPGDKVHT+ TI K+VSG   E LE +  VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  IVIEAGTYPVSSIKTAEAIKVVENSQRDINIAFMNELAMVFDRMGIDTSEVVEGMNTKWN  252
             V+ AG    SSIK AEA KV+EN+QRD+NIA+MNELA++FD+++IDT+EV+ +  TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  ALGFKPGLVGGHCIGVDPYYFTYEAEKLGYHSQIILSGRRVNDAMGGFVAETAIREMVRV  312
             L FKPGLVGGHCIGVDPYY+T  A+ +G H+++IL+GRR+ND M+ ++A   I+E+++ 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GLAPKSSNVVVLGITFKENCPDVRNSKVYDIVMRLKEYGVEPSVVDPWASGDEVKQVYGM  372
            GL  +++ V VLG+TFKENCPD+RN+KV +I+  LKEYG++ +V D  A  +E K+ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  QLRESGDIANADCLIVAVAHDEFKELGFERIDAFFGDKPDESKVLLDVKGILDAKRFSSY  432
            +L ++ ++   D ++ AV+H ++ E   ++ D  + +   +  +++D+KGI+++  ++  
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME---NKKD--YINLVKDCGIVFDIKGIINSDELNVS  418

Query  433  GSFWRL  438
              +WRL
Sbjct  419  QRLWRL  424

298) Cvib_0685 in NC_009337


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  366 bits (1376),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 236/425 (56%), Positives = 318/425 (75%), Gaps = 20/425 (4%)

Query  9    SPKIAVIGLGYVGLPLAVEFAKHYPVAGFDIKQPRIDELNSCKDSTLETEEQELKMCITR  68
            + +IAV+GLGYVGLP+AV F++   V GFDI+++RI EL++  D T E  E+ LK     
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-----  56

Query  69   ENPLPKSGAKGLFVTTNLQDLADANVYIVTVPTPTDKNNRPDLTPLVKASETVGKVLKQG  128
                       +  T+N +DL  A+  I++VPTP DK+N+PDL PL+KASETVGKV+  +
Sbjct  57   --------NTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPD  108

Query  129  DIVIYESTVYPGATEEDCVPVLEKISGMTMNEGFFVGYSPERINPGDKLHTVTKIKKVTS  188
             IV+YESTVYPGATEE+CVPVLEK SG+    +FFVGYSPERINPGDK+HT   I KV S
Sbjct  109  TIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVS  168

Query  189  GSTPEAAAVVNGLYLSIIEAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELARIFNRME  248
            G T E   +V ++Y S++ AG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF++++
Sbjct  169  GQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLD  228

Query  249  IDTLDVLEAASTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEVGYNPEIILAGRRLNDNM  308
            IDT +VL A++TKWNFL FKPGLVGGHCIGVDPYYL++KAQEVG +PE+ILAGRR+NDNM
Sbjct  229  IDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNM  288

Query  309  GAYVASEAVKLLIRNDCHVKNAKVLVLGITFKENCPDIRNSRVIDIIKELQEYGCNVEVA  368
            + Y+AS+ +K L++++ +V+ A V VLG+TFKENCPD+RN++VI+II EL+EYG NV V 
Sbjct  289  AKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVN  348

Query  369  DPWASPEEVMHEYGLPMIHSTNGIEKNNYQAVVAAVGHNEFKALDPRAW--LTKN-GIVY  425
            D  A  +E    +GL +I++    E +  + V+ AV H+++   + +    L K+ GIV+
Sbjct  349  DVEADKNEAKKFFGLDLIDTK---ELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVF  404

Query  426  DVKGI  430
            D+KGI
Sbjct  405  DIKGI  409

299) Desal_0761 in NC_012881


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 223/406 (55%), Positives = 314/406 (78%), Gaps = 7/406 (1%)

Query  33   KFKVLGLDISEQRVKELSEGFDRTNEVLENDF-HNYVEFSTDASLLKDCGVIIVAVPTPI  91
            K KV+G+DI+E R+KEL + +DRTNEV EN + +  +E++++A  LK  + II+AVPTPI
Sbjct  24   KHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIAVPTPI  83

Query  92   DEARNPDLKPVVGASTMVGANMSADSIVVYESTVYPGLTEDICVPILEENSGLKYGKDFG  151
            D   +PDL P++ AS  VG  +++D+IVVYESTVYPG TE+ CVP+LE  SGL  GKDF 
Sbjct  84   DKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFF  143

Query  152  VGYSPERINPGDREHTLQTIVKVVAGNDAEVADLLDKLYSSIITAGTHRASCIKVAEAAK  211
            VGYSPERINPGD+ HT++TI KVV+G+  EV +++  +YSS++TAG H+AS IKVAEAAK
Sbjct  144  VGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAK  203

Query  212  VIENTQRDLNIALMNELSMIFDKMGIDTLDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYY  271
            VIENTQRD+NIALMNEL++IFDK++IDT +VL A+GTKWNFL F+PGLVGGHCIGVDPYY
Sbjct  204  VIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYY  263

Query  272  LTTKAEEIGHHPQVILAGRKINDSVGKFIADTTIKQMINGDSKVKGAKVGVLGLTFKENV  331
            LT KA+E+GHHP+VILAGR+IND+++K+IA   IK++++ +  V+GA V VLGLTFKEN 
Sbjct  264  LTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENC  323

Query  332  PDLRNTKVVDVVDELESFGVDVLIHDAYADPEEAVEEYNITTSSFEEFKDLEAVVLAVSH  391
            PDLRNTKV+++++EL  +G++V ++D  AD +EA   + +      E+K ++ V++AV+H
Sbjct  324  PDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPH  383

Query  392  DKYRDLELDTIKSWFRNPEN-ALIIDVKCFFDRKELEDAGIRHWRL  436
              Y    ++  K  +    + ++++D+K +++  EL + + R WRL
Sbjct  384  KDY----MENKKDYINLVKDCGIVFDIKGIINSDEL-NVSQRLWRL  424

300) Lbys_0845 in NC_014655


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  366 bits (1376),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 221/422 (53%), Positives = 322/422 (77%), Gaps = 14/422 (3%)

Query  6    HLAIIGQGYVGLPLAIEFAHHFPVLGFDIQEERVRELNAGQDRTLEADLPKLKHVLQLGN  65
            ++A++G GYVGLP+A+ F++   V+GFDI+E R++EL+   DRT E    KLK+      
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-----  58

Query  66   KEPWAEGYRASSSLEDLKKANVFIVTVPTPIDTFNAPDLKPLLSATEMLGKVLKKGDMVI  125
                   Y +++  EDLKKA+ +I++VPTPID  N PDL PLL A+E +GKV+  + +V+
Sbjct  59   ----NIEYTSNA--EDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVV  112

Query  126  YESTVFPGCTEEECVPVLERESGLRYNVDFYVGYSPERIVPGDKVHTLTKIKKVTSGSTP  185
            YESTV+PG TEEECVPVLE+ SGL    DF+VGYSPERI PGDKVHT+  I KV SG T 
Sbjct  113  YESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTL  172

Query  186  EIAKKVDDLYKKIIEAGTHLAPSIKVAEASKAIENAQRDINISFVNELALIFDRIGIDTH  245
            E+   V D+Y  ++ AG H A+SIKVAEA+K IEN+QRD+NI+++NELA+IFD+++IDT+
Sbjct  173  EVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTN  232

Query  246  DVLEAAGTKFNFLKYQPGLVGGHCISVDPYYLAHKATQLGYHPAVILSGRRVNDSVAEFV  305
            +VL A+GTK NFL+++PGLVGGHCI+VDPYYL+HKA ++G HP VIL+GRR+ND++A ++
Sbjct  233  EVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYI  292

Query  306  ASKVVKLMIEKDLQVKGSKALVLGFTFKENCPDVRNTKVIDVYHELREYGLEVDVYDPWA  365
            AS+V+K ++ ++L+V+G+   VLG+TFKENCPD+RNTKVI++ +EL+EYGL+V V D  A
Sbjct  293  ASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEA  352

Query  366  DQEEVKHEYGLQLIESLPDAATYNSIILAVAHREFLEI--DLNTLKKEKAVIFDIKACLP  423
            D++E K  +GL+LI++  +    + +++AV+H++++E   D   L K+ +++FDIK+ + 
Sbjct  353  DKNEAKKFFGLDLIDT-KELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIIN  411

Query  424  RE  425
             +
Sbjct  412  SD  413

301) amb0144 in NC_007626


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  366 bits (1376),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 221/425 (52%), Positives = 309/425 (73%), Gaps = 8/425 (1%)

Query  7    SSRIAVIGLGYVGLPLAVAIARHFPTIGFDIDQGRVAELHKGLDRTGEVETARLRASTMR  66
            +  IAV+GLGYVGLP+AV+++     IGFDI+++R+ EL +  DRT EV   +L+ + + 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  67   LSAKADDIAGQDVYIVTVPTPVDSGNYPDLKPVLSACRTVGRAMKNGAVVVFESTVYPGV  126
             +++A+D+   D  I++VPTP+D  N PDL P+L A  TVG+ +  +++VV+ESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  127  TEDICGPELEKYSGLKCGTDFFLGYSPERINPGDREHTVDRITKVIAGQTPEVTALLARI  186
            TE+ C P LEKYSGL CG DFF+GYSPERINPGD+ HT + ITKV++GQT EV  ++A +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  187  YGSVTTGGVFPAASIRVAEAAKVIENAQRDINIAFINEITMIFQKLGISVYDVLDASSTK  246
            Y+SV T+GV  A+SI+VAEAAKVIEN+QRD+NIA++NE+++IF+KL+I   +VL AS+TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  247  WNFLNFKPGLVGGHCIGVDPFYLAQCAQDNGHHPEIILSGRRINDGMGEWIAERVSAQL-  305
            WNFLNFKPGLVGGHCIGVDP+YL++ AQ+ GHHPE+IL+GRRIND M+  IA  V  +L 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  306  -----SGPSRILVLGLTFKENVPDLRNSKVVDVIRALRARGHSVDVHDPFADPAEAEHEY  360
                    + + VLGLTFKEN PDLRN+KV+++I  L+  G +V V+D  AD  EA   +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  361  SETLMPSLDGAAGYDCLLGAVPHQPYVAFSGESFTTLVRPDGLVADVKGMWRGMDIPQSL  420
            +  L+ + +     D +L AVPH+ Y+  +   +  LV+  G+V D+KG+  + ++  S 
Sbjct  362  GLDLIDTKELKMV-DVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQ  419

Query  421  RLWRL  425
            RLWRL
Sbjct  420  RLWRL  424

302) Cthe_2340 in NC_009012


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 211/427 (50%), Positives = 327/427 (77%), Gaps = 6/427 (1%)

Query  13   KISVIGLGYVGMPLAIAFAKYAQVIGFDVDKKKIEIYKSGIDPTKEIGNEAIKNTTVEFT  72
            +I+V+GLGYVG+P+A++F++  +VIGFD++  +I   K+  D T+E+ ++ +KNT +E+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDETKLKEAKFHIVAVPTPINIDKTPDLTPVESASVIVGRNMARGSYVVYESTVYPGVTE  132
            S+   LK A F I+AVPTPI+ ++ PDL P+  AS  VG+ ++ ++ VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DICIPILERESGLKCGVDFKVGYSPERINPGDKKHTLETIKKIVSAIDDESLDEIAKIYS  192
            + C+P+LE+ SGL CG DF VGYSPERINPGDK HT+ETI K+VS+   E L+ +A +YS
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVIKAGVHKTSSIKVAEAAKVVENSQRDINIAFMNELAMVFDRMGIDTKEVIDAMNTKWN  252
             V+ AGVHK+SSIKVAEAAKV+EN+QRD+NIA+MNELA++FD+++IDT+EV+ A  TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  ALGFYPGLVGGHCIGVDPYYFIYQAEKLGYHSQIILSGRKINDGMGEFIANTIIKKLIHv  312
             L F PGLVGGHCIGVDPYY+  +A+ +G H+++IL+GR+IND M+ +IA+ +IK L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  nkvvkkskvvIFGITYKENCPDTRNSKVVDIIKGLNEYGIEPIVVDPQANREDTKQEYGI  372
               V+ + V ++G+T+KENCPD RN+KV++II  L+EYG++  V D +A+++++K+ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELMDIDDVKDADCLVFAVAHDEFKNMAWEQIEKFFKNIDNSEKVIIDVKGIFDKNKIEKL  432
            +L+D  ++K  D ++FAV+H ++     E+   +++ + +   +++D+KGI++ + ++ +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYM----ENKKDYINLVKDCG-IVFDIKGIINSDELN-V  417

Query  433  GYCYWRL  439
            +   WRL
Sbjct  418  SQRLWRL  424

303) Clo1313_3003 in NC_017304


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 211/427 (50%), Positives = 327/427 (77%), Gaps = 6/427 (1%)

Query  13   KISVIGLGYVGMPLAIAFAKYAQVIGFDVDKKKIEIYKSGIDPTKEIGNEAIKNTTVEFT  72
            +I+V+GLGYVG+P+A++F++  +VIGFD++  +I   K+  D T+E+ ++ +KNT +E+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDETKLKEAKFHIVAVPTPINIDKTPDLTPVESASVIVGRNMARGSYVVYESTVYPGVTE  132
            S+   LK A F I+AVPTPI+ ++ PDL P+  AS  VG+ ++ ++ VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DICIPILERESGLKCGVDFKVGYSPERINPGDKKHTLETIKKIVSAIDDESLDEIAKIYS  192
            + C+P+LE+ SGL CG DF VGYSPERINPGDK HT+ETI K+VS+   E L+ +A +YS
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVIKAGVHKTSSIKVAEAAKVVENSQRDINIAFMNELAMVFDRMGIDTKEVIDAMNTKWN  252
             V+ AGVHK+SSIKVAEAAKV+EN+QRD+NIA+MNELA++FD+++IDT+EV+ A  TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  ALGFYPGLVGGHCIGVDPYYFIYQAEKLGYHSQIILSGRKINDGMGEFIANTIIKKLIHv  312
             L F PGLVGGHCIGVDPYY+  +A+ +G H+++IL+GR+IND M+ +IA+ +IK L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  nkvvkkskvvIFGITYKENCPDTRNSKVVDIIKGLNEYGIEPIVVDPQANREDTKQEYGI  372
               V+ + V ++G+T+KENCPD RN+KV++II  L+EYG++  V D +A+++++K+ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELMDIDDVKDADCLVFAVAHDEFKNMAWEQIEKFFKNIDNSEKVIIDVKGIFDKNKIEKL  432
            +L+D  ++K  D ++FAV+H ++     E+   +++ + +   +++D+KGI++ + ++ +
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYM----ENKKDYINLVKDCG-IVFDIKGIINSDELN-V  417

Query  433  GYCYWRL  439
            +   WRL
Sbjct  418  SQRLWRL  424

304) Dret_2415 in NC_013223


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  366 bits (1374),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 215/403 (54%), Positives = 301/403 (75%), Gaps = 5/403 (1%)

Query  42   RVIGFDIARERVDELQAGRDSTGEIDPAVLGEVDLELTCDPEILAQATVFIVAVPTPIDA  101
            +VIGFDI   R+ EL+   D T E+    L + ++E T ++E L +A  +I+AVPTPID 
Sbjct  26   KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIAVPTPIDK  85

Query  102  NRRPDLGPTRGATRTVAGAMGPGSVVVFESTVYPGVTEEVCVPLLEEVSGLQCGRDFRVG  161
            + +PDL P   A+ TV+  + P+++VV+ESTVYPG TEE CVP+LE  SGL CG+DF VG
Sbjct  86   HNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVG  145

Query  162  YSPERINPGDKDNRLENIIKVVAGQDQATTDLLSDLYGSVVHAGIHKAPTIKVAEAAKVI  221
            YSPERINPGDK + +E I KVV+GQ     ++++D+Y+SVV AG+HKA++IKVAEAAKVI
Sbjct  146  YSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVI  205

Query  222  ENTQRDLNIALMNELAQMFHKMDIDTQDVLAAAGTKWNFLPFRPGLVGGHCIGVDPYYLT  281
            ENTQRD+NIALMNELA +F+K+DIDT++VL A+GTKWNFL F+PGLVGGHCIGVDPYYLT
Sbjct  206  ENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLT  265

Query  282  FKAEALGLHPQIILAGRRINDGMGAYVAQTAVKSLVQNGSPVHGARVAVLGVAFKENVPD  341
             KA+ +G HP++ILAGRRIND M+ Y+A   +K L+++G  V+GA V VLG++FKEN PD
Sbjct  266  HKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPD  325

Query  342  LRNTRVVDIVHELQDYQIEVLVHDPLVSADEAREEYGLELVDWDALSDLDGLILAVGHRP  401
            LRNT+V++I++EL++Y ++V V+D     +EA+  +GL+L+D   L  +D +++AV H+ 
Sbjct  326  LRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKD  385

Query  402  YTALSPQRIAEMFASGQGLVMDVKAALDGEMLR-EQGLTYWRL  443
            Y     + I   +  + G+V D+K+ ++++ L   Q L  WRL
Sbjct  386  YMENKKDYIN--LVKDCGIVFDIKGIINSDELNVSQRL--WRL  424

305) PG1277 in NC_002950


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  365 bits (1372),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 218/413 (53%), Positives = 308/413 (75%), Gaps = 11/413 (2%)

Query  5    RIAIIGLGYVGLPLARLFSTKFPTIGFDINPNRVEELMSGYDSTGEIGNELLQEALQKGL  64
             IA++GLGYVGLP+A  F+ K   IGFDIN +R+ EL + YD T E+ ++ L+++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  65   LCTTKIEEIRDCNFYIVTVPTPIDHNHTPDLRPLLAASETIGKVIGQGDVVVYESTVYPG  124
              T++ E+++  +F I++VPTPID ++ PDL PLL ASET+GKVI  + +VVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  VTEDECIPIIEKVSGLKYNVDFFAGYSPERINPGDKVHTVENIKKVTSGSTPEIADYVDR  184
             TE+EC+P++EK SGL    DFF GYSPERINPGDKVHT E I KV SG T E+ + V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  MYNTVLVNGTHKASSIKVAEASKIIENAQRDVNIAFMNEIAKIFNAMDIDTHEVLEAAAT  244
            +Y++V+  G HKASSIKVAEA+K+IEN+QRDVNIA+MNE+A IF+ +DIDT+EVL A++T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLPFQPGLVGGHCIGVDPYYLIQRAQVYGVYPRVLMSARRLNDSMGSYIASQTIKQM  304
            KWNFL F+PGLVGGHCIGVDPYYL ++AQ  G  P V++++RR+ND+M+ YIAS+ IK++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  NKAGIMVKDARILILGFTFKENCPDIRNTKVIDTYSTLQEYTKNIIVHDPWANPSIAEQV  364
             K G+ V++A + +LG+TFKENCPD+RNTKVI+    L+EY  N+ V+D  A+ + A + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGIKIHNEFPKGKFDAIIIAVAHRDFSN-----IDLEKSSTANTIIYDVKGIL  412
            +G+ + +       D +++AV+H+D+ +     I+L K      I++D+KGI+
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDC---GIVFDIKGII  410

306) capL in NC_018645


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  365 bits (1371),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 228/430 (54%), Positives = 328/430 (77%), Gaps = 11/430 (2%)

Query  4    NTKIAVIGLGYVGLPLAVHFAAKFHTIGLDLKESIIENCKKFEDPTGEVSKDEFEKAAYF  63
            N +IAV+GLGYVGLP+AV F+ K   IG+D++ES I + K+  D T EV+ + + ++   
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  64   FPTSDPSKISDADYIIVAVPTPIDTARRPDLKYMESSSQTAGKYMKKGAVVIFESTVYPG  123
            + TS++  +  AD+II+AVPTPID   +PDL  +  +S+T GK +  +++V++ESTVYPG
Sbjct  62   Y-TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  124  VTEEICVPILEKVSGYEWKKDFHVGYSPERINPGDKEHTLPKIVKVVSGDDEETCDRVAM  183
             TEE CVP+LEK SG    KDF VGYSPERINPGDK HT+  I KVVSG+  E  + VA 
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  LYETIIDAGVHRTQTIKEAEAAKVIENTQRDLNIALMNELALIFDKFGIDTKNVLEAAGS  243
            +Y +++ AGVH++ +IK AEAAKVIENTQRD+NIALMNELA+IFDK++IDT++VL A+G+
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLPFKPGLVGGHCIGVDPYYLTFKAESEGYHPQVILSGRRINDNMGRFVVEKTIKMM  303
            KWNFL FKPGLVGGHCIGVDPYYLT KA+  G HP+VIL+GRRINDNM++++  + IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  INQGLNVKDSKIGVLGLTFKEDCPDLRNTRVVDIIEELCLYGTNVLVHDAISDPKEALAY  363
            ++QGL+V+++ + VLGLTFKE+CPDLRNT+V++IIEEL  YG NV V+D  +D +EA  +
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YNINQCEWDELNELSALILAVPHKEYL--KKNLSELKKMLLPDGC--LIDVKSVFDPQEA  419
            + ++  +  EL+ +  +++AVPHK+Y+  KK+  +L K     +C  ++D+K++++++E 
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVK-----DCGIVFDIKGIINSDEL  415

Query  420  KKMGINFWRL  429
             +++  +WRL
Sbjct  416  -NVSQRLWRL  424

307) PGTDC60_2201 in NC_015571


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  365 bits (1370),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 218/413 (53%), Positives = 307/413 (75%), Gaps = 11/413 (2%)

Query  5    RIAIIGLGYVGLPLARLFSTKFPTIGFDINPNRVEELMSGYDSTGEIGNELLQEALQKGL  64
             IA++GLGYVGLP+A  F+ K   IGFDIN +R+ EL + YD T E+ ++ L+++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  65   LCTTKIEEIRDCNFYIVTVPTPIDHNHTPDLRPLLAASETIGKVIGQGDVVVYESTVYPG  124
              T++ E+++  +F I++VPTPID ++ PDL PLL ASET+GKVI  + +VVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  VTEDECIPIIEKVSGLKYNVDFFAGYSPERINPGDKVHTVENIKKVTSGSTPEIADYVDR  184
             TE+EC+P++EK SGL    DFF GYSPERINPGDKVHT E I KV SG T E+ + V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  MYNTVLVNGTHKASSIKVAEASKIIENAQRDVNIAFMNEIAKIFNAMDIDTREVLEAAAT  244
            +Y++V+  G HKASSIKVAEA+K+IEN+QRDVNIA+MNE+A IF+ +DIDT EVL A++T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLPFQPGLVGGHCIGVDPYYLIQRAQVYGVYPRVLMSARRLNDSMGSYIASQTIKQM  304
            KWNFL F+PGLVGGHCIGVDPYYL ++AQ  G  P V++++RR+ND+M+ YIAS+ IK++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  NKAGIMVKDARILILGFTFKENCPDIRNTKVIDTYSTLQEYTKNIIVHDPWANPSIAEQV  364
             K G+ V++A + +LG+TFKENCPD+RNTKVI+    L+EY  N+ V+D  A+ + A + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGIKIHNEFPKGKFDAIIIAVAHRDFSN-----IDLEKSSTANTIIYDVKGIL  412
            +G+ + +       D +++AV+H+D+ +     I+L K      I++D+KGI+
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDC---GIVFDIKGII  410

308) lp12_0849 in NC_016811


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  365 bits (1371),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 206/426 (49%), Positives = 330/426 (78%), Gaps = 2/426 (0%)

Query  3    LKRRIVMMGLGYVGLTLAVALGKITRVIAYDKNSSRISELKNGQDRNLEVEDDALAVSDL  62
            ++R I ++GLGYVGL +AV++G+  +VI++D N SRI ELKN  DR  EV ++ L  +++
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  63   LLTSDPKELENGDFYIIAVPTPLNKNRQVDFSMLFEATKLVGKCLKKGDIVVYESSVYPG  122
              TS++ +L ++DF IIAVPTP++K+ + D+  L+ A+  VGK +  + IVVYES+VYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  ATEEQCIPLLEKSSKLICGESFSVGYSPERINPSDQEHVLQNIVKIVSATDGDTLNIISE  182
            ATEE+C+P+LEK S L+CG  F VGYSPERINP+D+ H ++ I K+VS+   + L+I+++
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  183  VYNSIINAGVFPVSSIRVAEAAKVIENAQRDINIGFINDIAVMLHHLGIDTAEVIQAMKT  242
            VY+S++ AGV   SSI+VAEAAKVIEN+QRD+NI+++N++A++++ L+IDT EV++A  T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNYIPFQPGLVGGHCIGINSYYLMHKAEEIGYYSNLIMAGRQINESIAKFIAEQTIKQL  302
            KWN++ F+PGLVGGHCIG+++YYL HKA+E+G  +++I+AGR+IN+++AK+IA + IK+L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  IRQGSPVKRARIAILGLTYKENCSDLRDTRVIDIIRELQSYDTELFIHDPIADAVAAKKH  362
            ++QG  V+ A + +LGLT+KENC+DLR+T+VI+II EL+ Y+ ++ ++D  AD   AKK 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  363  YGIELQSWENLNDLDAMIFTVSHQYYLTMDRHEIKNKLNWHGLIMDVKEIFNYEEFKDTG  422
            +G++L    +L+ +D ++F+V+H+ Y+  ++ +  N ++  G++ D+K I+N +E+ + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDEL-NVS  418

Query  423  ILLWRL  428
              LWRL
Sbjct  419  QRLWRL  424

309) LP6_0816 in NC_021350


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  365 bits (1371),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 206/426 (49%), Positives = 330/426 (78%), Gaps = 2/426 (0%)

Query  3    LKRRIVMMGLGYVGLTLAVALGKITRVIAYDKNSSRISELKNGQDRNLEVEDDALAVSDL  62
            ++R I ++GLGYVGL +AV++G+  +VI++D N SRI ELKN  DR  EV ++ L  +++
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  63   LLTSDPKELENGDFYIIAVPTPLNKNRQVDFSMLFEATKLVGKCLKKGDIVVYESSVYPG  122
              TS++ +L ++DF IIAVPTP++K+ + D+  L+ A+  VGK +  + IVVYES+VYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  ATEEQCIPLLEKSSKLICGESFSVGYSPERINPSDQEHVLQNIVKIVSATDGDTLNIISE  182
            ATEE+C+P+LEK S L+CG  F VGYSPERINP+D+ H ++ I K+VS+   + L+I+++
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  183  VYNSIINAGVFPVSSIRVAEAAKVIENAQRDINIGFINDIAVMLHHLGIDTAEVIQAMKT  242
            VY+S++ AGV   SSI+VAEAAKVIEN+QRD+NI+++N++A++++ L+IDT EV++A  T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNYIPFQPGLVGGHCIGINSYYLMHKAEEIGYYSNLIMAGRQINESIAKFIAEQTIKQL  302
            KWN++ F+PGLVGGHCIG+++YYL HKA+E+G  +++I+AGR+IN+++AK+IA + IK+L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  IRQGSPVKRARIAILGLTYKENCSDLRDTRVIDIIRELQSYDTELFIHDPIADAVAAKKH  362
            ++QG  V+ A + +LGLT+KENC+DLR+T+VI+II EL+ Y+ ++ ++D  AD   AKK 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  363  YGIELQSWENLNDLDAMIFTVSHQYYLTMDRHEIKNKLNWHGLIMDVKEIFNYEEFKDTG  422
            +G++L    +L+ +D ++F+V+H+ Y+  ++ +  N ++  G++ D+K I+N +E+ + +
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDEL-NVS  418

Query  423  ILLWRL  428
              LWRL
Sbjct  419  QRLWRL  424

310) CFF8240_1397 in NC_008599


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  364 bits (1368),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 232/386 (61%), Positives = 311/386 (81%), Gaps = 4/386 (1%)

Query  5    KIGIIGLGYVGMPLAAAFSDAFSVVGFDLNEKRINELKNGIDRTLELDEEQMAKVLKNGM  64
            +I+++GLGYVG+P+A +F++   V+GFD+NE RI+ELKN  DRT E+ E+++ +     +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN---TNI  60

Query  65   KFSVNLDDIKECNFYIVTVPTPIDKNNRPDLTPLYkssaslakvlkkGDIVVYESTVYPG  124
             ++ N +D+K  +F I++VPTPIDK+N+PDL PL K+S +++KV+  + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  VTEDECVPVLET-SGLKFGVDFECGYSPERINPGDKEHTVTkikkiisasssaaLKTVED  183
             TE+ECVPVLE  SGL  G DF  GYSPERINPGDK HT   I K++S+ +   L  V D
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  VYSKIIKAGVYKASSIKVAEAAKVIENTQRDINIAFVNELLMIFDKMKIDTNEVLDAAAT  243
            VYS ++ AGV KASSIKVAEAAKVIENTQRD+NIA++NEL +IFDK+ IDTNEVL A++T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  244  KWNFLNFRPGLVGGHCIGVDPYYLTHKAEEIGYHPEIILAGRRINDNMGIYHANQSVKMM  303
            KWNFLNF+PGLVGGHCIGVDPYYLTHKA+E+G HPE+ILAGRRINDNM+ Y A++ +K +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  304  IKNGLKVNGAKVLVLGITFKENCPDIRNSRVIDVIKELKEFGCNVDVYDPWADANDVKKE  363
            +K+GL V+GA V VLG+TFKENCPD+RN++VI++I ELKE+G NV V D  AD N+ KK 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  364  YGVELLESLNLSGHDCVILAVAHKEF  389
            +G++L+++ +L   D V++AV+HK++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDY  386

311) Celal_3143 in NC_014934


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  364 bits (1369),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 229/422 (55%), Positives = 316/422 (75%), Gaps = 11/422 (2%)

Query  5    KIAIIGLGYVGLPLARLFATKYSVVGFDINKQRVNDLNTGHDATLEVDNKTLNAVLKNKS  64
            +IA++GLGYVGLP+A  F+ K  V+GFDIN  R+++L+   D T EV ++ L+       
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-------  56

Query  65   DSKLGLYCSYSIEDLKDCNYYIVTVPTPVDKNNRPDLTPLYKSSETVASVLKKGDIVIYE  124
            ++++  Y S + EDLK  ++ I++VPTP+DK+N+PDL PL K+SETV+ V+  + IV+YE
Sbjct  57   NTNIE-YTS-NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  125  STVYPGATEEECIPVLEKVSGLKFNTDFFAGYSPERINPGDKEHTVEKILKVTSGSTPEI  184
            STVYPGATEEEC+PVLEK SGL    DFF GYSPERINPGDK HT E I KV SG T E+
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  185  GIKVDNLYKSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNLMNIDTHAV  244
               V ++Y SV+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ ++IDT+ V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  245  LEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSMGGYVAS  304
            L A+GTKWNFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M+ Y+AS
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  305  EVIKLMLKNDLKIKNAKILVLGITFKENCPDVRNTKAVDVISNLKEYGIETTVYDPWASP  364
            +VIK +LK++L ++ A + VLG+TFKENCPD+RNTK +++I +LKEYG++ TV D  A  
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  365  EEVLHEYNLNTIKDIPSEKYSAIVLTVAHKeyeelelnnyleTN--GVIYDVKGVLKSKG  422
            +E    + L+ I          ++++V+HK+Y E   +     +  G+++D+KG+++S  
Sbjct  355  NEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414

Query  423  IA  424
            + 
Sbjct  415  LN  416

312) BDI_1308 in NC_009615


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  364 bits (1368),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 223/423 (53%), Positives = 313/423 (74%), Gaps = 6/423 (1%)

Query  11   KLALIGLGYVGLPIAMEFAKHVSVIGFDINEDRLDKLRNCIDPCGELPTEVFEHKDITFT  70
            ++A++GLGYVGLP+A+ F++   VIGFDINE R+  L+N  D   E+  + + + +I +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  71   SSIEKLREASFYVIAVPTPIDSHNEPDLSPLLGATRTVGKVLKRGDYVVYESTVYPGCTE  130
            S+ E L+ A F +IAVPTPID HN PDL PLL A+ TVGKV+  +  VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  131  EDCIPILEEVSGLRVGEDFKVGYSPERINPGDKVHTLVNTVKIVSGCDAEALETISEVYK  190
            E+C+P+LE  SGL  G DF VGYSPERINPGDKVHT+    K+VSG   E LE +++VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  191  LVVQAGLHRAPSIKVAEAAKIIENTQRDVNIALMNELSIIFDRMGVNTFDVLKAAGTKWN  250
             VV AG+H+A+SIKVAEAAK+IENTQRDVNIALMNEL+IIFD+++++T +VLKA+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  251  FLPFSPGLVGGHCIGVDPYYLVHKAKELQYHTKMINSGRYVNDSMGRYIGKKVVKKIISQ  310
            FL F PGLVGGHCIGVDPYYL HKA+E+  H  +I +GR +ND+M++YI+ +V+K ++ Q
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  311  GKNILGAHVLVMGMTFKENVSDIRNSKVADIINEFKDFGAEVDVMDPFASPLEVLQEYGI  370
            G ++ GA V V+G+TFKEN +D+RN+KV +II+E+K++G +V V D  A   E  + +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  371  RLVERPG-KKYDAVVVAVAHTTYLKLDESYFMSITNEHAVLADVKGVYRG---SIHQMIY  426
             L++    K  D V+ AV+H  Y+     Y +++ ++ +++ D+KG+  +   ++ Q + 
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKDY-INLVKDCGIVFDIKGIINSDELNVSQRL-  421

Query  427  WSL  429
            W L
Sbjct  422  WRL  424

313) Thimo_3602 in NC_019940


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  364 bits (1366),  Expect = 6e-102, Method: Compositional matrix adjust.
 Identities = 213/398 (54%), Positives = 295/398 (75%), Gaps = 2/398 (0%)

Query  28   LGRRYPTVGFDIDAARIAELRAGRDSSLEVEPDKLAASAHLSYAERVEDLAGCNFFIVTV  87
            +G +   +GFDI+ +RI EL+   D + EV  +KL  ++++ Y+   EDL   +F+I++V
Sbjct  21   FGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-NTNIEYTSNAEDLKKADFIIIAV  79

Query  88   PTPVDDHKEPDLRPLQAASRTVGGVLGRGDIVVYESTVYPGATEEVCVPILEATSGLTFN  147
            PTP+D H+ PDL PL  AS TVG V+  + IVVYESTVYPGATEE CVP+LE  SGL   
Sbjct  80   PTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCG  139

Query  148  DGFFVGYSPERINPGDKAHRLSGITKVTSGSTPEVAAFVDALYASIIVAGTHLASSIRVA  207
             +FFVGYSPERINPGDK H +  ITKV SG T EV  +V  +Y+S++ AG H ASSI+VA
Sbjct  140  KDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVA  199

Query  208  EAAKVIENTQRDVNIALINELALIFNRLGIDTDEVLAAAGSKWNFLPFRPGLVGGHCIGV  267
            EAAKVIENTQRDVNIAL+NELA+IF++L+IDT+EVL A+G+KWNFL F+PGLVGGHCIGV
Sbjct  200  EAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGV  259

Query  268  DPYYLTYKAQAIGYHPEVILAGRRLNDSMGAYVATCVIKLMARRDRLSAGSRVLILGLTF  327
            DPYYLT KAQ +G HPEVILAGRR+ND+M+ Y+A+ VIK + +++    G+ V +LGLTF
Sbjct  260  DPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTF  319

Query  328  KENCPDLRNTRVVDIVAELQDYGLACDVHDPWANVAEARREYGIELIFEPPAATYDAIVL  387
            KENCPDLRNT+V++I+ EL++YGL   V+D  A+  EA++ +G++LI        D +++
Sbjct  320  KENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLF  379

Query  388  AVAHRQFQALGATAIRAFGRPGAVVYDVKHVLAKEAVD  425
            AV+H+++          + +  ++V+D+K ++  + ++
Sbjct  380  AVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

314) MED152_05730 in NC_020830


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  363 bits (1362),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 218/419 (53%), Positives = 316/419 (76%), Gaps = 11/419 (2%)

Query  5    KIGVIGLGYVGLPLANLFAKKYAVVGFDIKPDRILALKEGVDATlevekkelvnvlkkvD  64
            +I+V+GLGYVGLP+A  F++K  V+GFDI+  RI  LK+  D T EV  + L        
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL--------  55

Query  65   DQENGLFFTDQSSDLKGCDYYIITVPTPVDINNQADLTPLIKASETVGQVMQKDAIVIYE  124
             ++  + +T ++ DLK  D+ II+VPTP+D +N++DL PL+KASETVG+V+  D+IV+YE
Sbjct  56   -KNTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  125  STVYPGVTEDTCVPVLAKTSGLNYNSDFFVGYSPERVNPGDKNRSIENILKITSASTPEI  184
            STVYPG TE+ CVPVL K SGL    DFFVGYSPER+NPGDK +++E I K+ S+ T E+
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  185  AKQVDQLYQSVIVAGTHLATSIKVAEAAKVIENSQRDINIAFVNELAKIFSLMNINTQEV  244
               V ++Y SV+ AG H A+SIKVAEAAKVIEN+QRD+NIA++NELA IF  ++I+T+EV
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  245  LVAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQRAQQIGYYPGIILAGRRINDSMGDYVAS  304
            L A+GTKWNFL FKPGLVGGHCIGVDPYYL+++AQ++G  P +ILAGRRIND+M+ Y+AS
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  305  QVIKLMVSRKVPIENASILVLGIAFKENCPDIRNSKVIDVVSALQEYGTRVTVFDPWADP  364
            +VIK ++ + + ++ A++ VLG++FKENCPD+RN+KVI+++  L+EYG  VTV D  AD 
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  365  KEVDQVYGIEAVNQLPNKKYDGIVLAVAHDEFLSINLK--EIKKELSVVYDVKGILPKE  421
            +E  + +G++ ++    K  D +++AV+H +++  +    ++ K+ ++V+D+KGI+  +
Sbjct  355  NEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

315) Phep_3952 in NC_013061


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  362 bits (1360),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 212/413 (52%), Positives = 313/413 (76%), Gaps = 5/413 (1%)

Query  6    KPHIAIIGLGYVGLPLAIEFAKQYQVLGFDIDEERIKDLTANIDRTKEADLNALQNVLGK  65
            + +IA++GLGYVGLP+A+ F+++ +V+GFDI+E RIK+L  N DRT+E   N L+N    
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---  58

Query  66   GLTLSSNQSLLEDCNVYIVTVPTPIDQFKAPDLKPLLSASKMLAKYLLKGDVVIYESTVY  125
             +  +SN   L   +  I++VPTPID+ + PDL PLL AS  ++K +  + +V+YESTVY
Sbjct  59   NIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVY  118

Query  126  PGCTEEDCVPILEKHSGLKYNSDFYCGYSPERINPGDKVNTLTKIIKVTSGSTPEVADWI  185
            PG TEE+CVP+LEK SGL    DF+ GYSPERINPGDKV+T+  I KV SG T EV + +
Sbjct  119  PGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIV  178

Query  186  DGLYASIITAGTHKAPSIKVAEASKAIENAQRDVNISFVNELALIFDKLDIDTADVIAAA  245
             ++Y+S++TAG HKA+SIKVAEA+K IEN+QRDVNI+++NELA+IFDKLDIDT +V+ A+
Sbjct  179  ADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKAS  238

Query  246  GTKWNFLKYKPGLVGGHCIGVDPYYLAHKSNALGYTPQVILSGRRVNENMGIFVASKVVK  305
            GTKWNFL++KPGLVGGHCIGVDPYYL+HK++ +G  P+VIL+GRR+N+NM+ ++AS+V+K
Sbjct  239  GTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIK  298

Query  306  MMIAKGSAVKGEKALILGFAFKENCPDIRNTRVIDIYTELQQFGMEVDVYDPWANADEVA  365
             ++ +G  V+G    +LG++FKENCPD+RNT+VI+I  EL+++G++V V D  A+ +E  
Sbjct  299  ELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  366  QEYNITLSPDLANQEYKAIIIAVAHNEFLSI--DYQKYKQAGAIIFDTKSFID  416
            + + + L      +    +++AV+H++++    DY +  +  +I+FD K++I+
Sbjct  359  KFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIIN  411

316) Slin_4077 in NC_013730


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  362 bits (1359),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 211/427 (50%), Positives = 323/427 (76%), Gaps = 9/427 (2%)

Query  23   EKQLAVIGLGYVGLPIALAFAQRFRVVGFDTNAERVAMLQRHEDPSRQLKPGDFTGADIR  82
            ++++AV+GLGYVGLP+A++F+++ +V+GFD N  R+  L+ + D + ++    +  ++I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  83   FTANPDDLRNAHFFVVAVPTPVDEYKVPDLKPLQRASEIIGRVLKPGDYVVYESTVYPGC  142
            +T+N++DL++A+F+++AVPTP+D  + PDL PL +ASE +G+V+ P+  VVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  143  TEDDCLPLLEQYSGLKLGDDFKLGYSPERINPGDKVRTLTDILKVVSGNDAEAVQTIADV  202
            TE++C+P+LE+YSGL  G DF +GYSPERINPGDKV+T+  I KVVSG+  E ++ +ADV
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  203  YGSIIRAGIYAATSIKVAEAAKVIENVQRDLNISLMNELAVIFDKMSIDTQEVLKAASTK  262
            Y+S++ AG+  A+SIKVAEAAKVIEN QRD+NI+LMNELA+IFDK+ IDT+EVLKA++TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  263  WNFLPFTPGLVGGHCIGIDPYYLLYKSRQLGYEPQVINSGRRVNDSMPAFVATKLVQLLL  322
            WNFL F PGLVGGHCIG+DPYYL  K++++G +P+VI +GRR+ND+M+ ++A+++++ LL
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  323  QREKNPAQTKVLVMGLTFKENIADIRNSKVVDLVRELMKYAINVHIVDPCASPNEVALDY  382
            ++  +   + V V+GLTFKEN +D+RN+KV++++ EL  Y++NV + D  A  NE    +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  383  KMTLLDA-PVGRYDAVIVAVAHDQYRTLDVVYFKSLMTERPILLDLKGLYTIGREDDLT-  440
             + L+D+  +   D V+ AV+H +Y      Y+ +L+ +  I++D+KG   I   D+L  
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKG---IINSDELNV  417

Query  441  ---YWRL  444
                WRL
Sbjct  418  SQRLWRL  424

317) wecC in NC_012108


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  361 bits (1357),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 224/425 (53%), Positives = 319/425 (76%), Gaps = 5/425 (1%)

Query  7    KIAVIGLGYVGLPLAIHFGTRYTTVGLDLKQRIVENCSRMKDPTGEVSVEEFKRA-VYFT  65
            +IAV+GLGYVGLP+A+ FG +   +G+D+++  + +     D T EV+ + +K + + +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  66   ATSDPAMIKDADFIIVAVPTPIDKARRPDLSPVESSSVTAGRYMKKGAVVIYESTVYPGV  125
            + ++   +K ADFII+AVPTPIDK  +PDL P+  +S T G+ +  +++V+YESTVYPG 
Sbjct  64   SNAED--LKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  126  TEEICVPILERESGYTWKKDFHVGYSPERINPGDKEHTLTRITKVVSGDDQATLEQVASL  185
            TEE CVP+LE+ SG    KDF VGYSPERINPGDK HT+  ITKVVSG+    LE VA +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  186  YESIIHAGVHRTMTIKEAEAAKVIENTQRDLNIALMNELALIFDRLNIDTKNVLEAAGSK  245
            Y S++ AGVH++ +IK AEAAKVIENTQRD+NIALMNELA+IFD+L+IDT++VL A+G+K
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  246  WNFLPFSPGLVGGHCIGVDPYYLTFKAQSEGYHPEVILAGRRINDNMGRFVVEKTIKMMI  305
            WNFL F PGLVGGHCIGVDPYYLT KAQ  G HPEVILAGRRINDNM++++  + IK ++
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  306  NAGRKIkggkvgvlglTFKEDCPDLRNTRVVDIVQELESYGAEVLVHEPMADPDEAMAYY  365
            + G  ++G+ V VLGLTFKE+CPDLRNT+V++I++EL  YG +V V++  AD +EA  ++
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  366  NIRLCAWEELADLGALIIAVPHRAYRLKKLSDFTQTLGVDGCLIDVKSMVDMNEVRKSNV  425
             + L    EL  ++ +++AVPH+ Y  +K  D+ + +   G ++D+K++++ +E+  S+ 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSDELNVSQ-  419

Query  426  NFWRL  430
             +WRL
Sbjct  420  RLWRL  424

318) Hydth_1287 in NC_017161


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  361 bits (1356),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 231/427 (55%), Positives = 322/427 (76%), Gaps = 8/427 (1%)

Query  13   KICVVGLGYVGLPLALAFSKHFKVVGYDKKVSRIDELLSGVDTTGEIKKEDLLKHSVEFT  72
            +I VVGLGYVGLP+A++F++  KV+G+D + SRI EL +  D T E+  + L + ++E+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDERRISEARFIVVAVPTPVDKLKNPDLSFLKEASKTVGRHLSKGSVVVYESTVYPGATE  132
            S+   +  A FI++AVPTP+DK ++PDL  L  AS TVG+ ++ +++VVYESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EVCVPILEKESGLKWKRDFFVGYSPERVNPGDKEHTIEKIVKVVAGDTESTLELIASVYG  192
            E CVP+LEK SGL   +DFFVGYSPER+NPGDK HT+E I KVV+G+T   LE++A VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  KVIEVGVYRAPDIRTAEAAKVIENIQRDINIALMNELSVIFHKLGIDTKEVLKAASTKWN  252
             V+  GV +A+ I+ AEAAKVIEN QRD+NIALMNEL++IF+KL+IDT+EVLKA++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLRFEPGLVGGHCIPVDPYYLAHKSLEAGHVPELILAGRRINENMPYYVAYQTVKLLIKS  312
            FL F PGLVGGHCI VDPYYL+HK+ E GH PE+ILAGRRIN+NM+ Y+A + +K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GKRVNSAKVLLMGITFKENVPDIRNSKVYELYKELKEFGMEVYVYDPVANQKEVKEEYGI  372
            G  V++A V ++G+TFKEN PD+RN+KV ++  ELKE+G++V V D  A+++E K  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  DLL--KDLKAHAPYDCILLAVKHSIFLESFDLSFYKAIMTEPYILVDIKGIYEKDAAIKE  430
            DL+  K+LK     D +L+AV H  ++E  +   Y  ++ +  I+ DIKGI + D  ++ 
Sbjct  364  DLIDTKELKMV---DVVLFAVPHKDYME--NKKDYINLVKDCGIVFDIKGIINSD-ELNV  417

Query  431  GFVYWRL  437
            +   WRL
Sbjct  418  SQRLWRL  424

319) HTH_1295 in NC_013799


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  361 bits (1356),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 231/427 (55%), Positives = 322/427 (76%), Gaps = 8/427 (1%)

Query  13   KICVVGLGYVGLPLALAFSKHFKVVGYDKKVSRIDELLSGVDTTGEIKKEDLLKHSVEFT  72
            +I VVGLGYVGLP+A++F++  KV+G+D + SRI EL +  D T E+  + L + ++E+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDERRISEARFIVVAVPTPVDKLKNPDLSFLKEASKTVGRHLSKGSVVVYESTVYPGATE  132
            S+   +  A FI++AVPTP+DK ++PDL  L  AS TVG+ ++ +++VVYESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EVCVPILEKESGLKWKRDFFVGYSPERVNPGDKEHTIEKIVKVVAGDTESTLELIASVYG  192
            E CVP+LEK SGL   +DFFVGYSPER+NPGDK HT+E I KVV+G+T   LE++A VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  KVIEVGVYRAPDIRTAEAAKVIENIQRDINIALMNELSVIFHKLGIDTKEVLKAASTKWN  252
             V+  GV +A+ I+ AEAAKVIEN QRD+NIALMNEL++IF+KL+IDT+EVLKA++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLRFEPGLVGGHCIPVDPYYLAHKSLEAGHVPELILAGRRINENMPYYVAYQTVKLLIKS  312
            FL F PGLVGGHCI VDPYYL+HK+ E GH PE+ILAGRRIN+NM+ Y+A + +K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GKRVNSAKVLLMGITFKENVPDIRNSKVYELYKELKEFGMEVYVYDPVANQKEVKEEYGI  372
            G  V++A V ++G+TFKEN PD+RN+KV ++  ELKE+G++V V D  A+++E K  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  DLL--KDLKAHAPYDCILLAVKHSIFLESFDLSFYKAIMTEPYILVDIKGIYEKDAAIKE  430
            DL+  K+LK     D +L+AV H  ++E  +   Y  ++ +  I+ DIKGI + D  ++ 
Sbjct  364  DLIDTKELKMV---DVVLFAVPHKDYME--NKKDYINLVKDCGIVFDIKGIINSD-ELNV  417

Query  431  GFVYWRL  437
            +   WRL
Sbjct  418  SQRLWRL  424

320) Tery_2267 in NC_008312


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  361 bits (1356),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 226/417 (55%), Positives = 325/417 (78%), Gaps = 11/417 (2%)

Query  5    KIAVIGLGYVGLPLAVEFAQKFPTLGFDISQTRVEQLNQGFDSTLEVDNDYLASVISETG  64
            +IAV+GLGYVGLP+AV F++K   +GFDI+++R+ +L++ +D T EV ++ L     +T 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL----KNTN  59

Query  65   FRVTTSIEDIANCNIYIVTVPTPIDRHKQPNLVPLIQASEAVGKILKKDDIVIYESTVYP  124
            +  T++ ED+ + ++ I++VPTPID+H++P+L+PL++ASE+VGK++  D IV+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  125  GTTEEECVPVLEKISGLKFNQDFFCGYSPERINPGDKIHtvtkvkkvtSGSTPEIAQKVD  184
            G+TEEECVPVLEK SGL   +DFF GYSPERINPGDK+HT   + KV SG T E+ + V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  185  ALYNTIVIAGTHLASSIRVAEAAKVIENSQRDINIAFVNELAIIFNKMGIKTREVLEAAA  244
             +Y+++V AG H ASSI+VAEAAKVIEN+QRD+NIA++NELAIIF+K++I T EVL A++
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  245  TKWNFLPFQPGLVGGHCIGVDPYYLTYKAQELGYHPEIILAGRRLNDNMGIYVAKQVVKL  304
            TKWNFL F+PGLVGGHCIGVDPYYLT KAQE+G HPE+ILAGRR+NDNM+ Y+A +V+K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  305  AIKKGQKVEGAAVLILGITFKENCSDIRNSKVIDLIRELEDFGCVVDVYDPWALPEEVKQ  364
             +K+G  V+GA+V +LG+TFKENC+D+RN+KVI++I EL ++G  V V D  A  +E K+
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  365  EHDIDILSDLPKLASYQAIVLAVAHDEFKQ-----LPLAKNDGQVIFDVKSFLPSAD  416
              ++D L D   L   + +++AV+H ++ +     + L K+ G ++FD+K+++ S +
Sbjct  360  FFGLD-LIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCG-IVFDIKGIINSDE  414

321) PGN_0613 in NC_010729


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  361 bits (1356),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 216/413 (53%), Positives = 306/413 (75%), Gaps = 11/413 (2%)

Query  19   RIAIIGLGYVGLPLARLFSTKFPTIGFDINPNRVEELISGYDSTGEIGNELLQEALQKGL  78
             IA++GLGYVGLP+A  F+ K   IGFDIN +R+ EL + YD T E+ ++ L+++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  79   LCTTKIEEIRDCNFYIVTVPTPIDHNHTPDLRPLLAASETIGKVIDQGDVVVYESTVYPG  138
              T++ E+++  +F I++VPTPID ++ PDL PLL ASET+GKVI  + +VVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  139  VTEDECIPIIEKVSGLKYNVDFFAGYSPERINPGDKVYTVENIKKVTSGSTPEIADYVDR  198
             TE+EC+P++EK SGL    DFF GYSPERINPGDKV T E I KV SG T E+ + V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  199  MYNTVLVNGTHKASSIKVAEASKIIENAQRDVNIAFMNEIAKIFNAMEIDTREVLEAAAT  258
            +Y++V+  G HKASSIKVAEA+K+IEN+QRDVNIA+MNE+A IF+ ++IDT EVL A++T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  259  KWNFLPFQPGLVGGHCIGVDPYYLIQRAQVYGVYPRVLMSARRLNDSMGSYIASQTIKQM  318
            KWNFL F+PGLVGGHCIGVDPYYL ++AQ  G  P V++++RR+ND+M+ YIAS+ IK++
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  319  NKAGIMVKDARILILGFTFKENCPDIRNTKVIDTYSTLQEYTKNIIVHDPWANPSIAEQV  378
             K G+ V++A + +LG+TFKENCPD+RNTKVI+    L+EY  N+ V+D  A+ + A + 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  379  YGIKIHNEFPKGKFDAIIIAVAHRDFSN-----IDLEKSSTANTIIYDVKGIL  426
            +G+ + +       D +++AV+H+D+ +     I+L K      I++D+KGI+
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDC---GIVFDIKGII  410

322) Echvi_4400 in NC_019904


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  359 bits (1350),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 206/400 (52%), Positives = 306/400 (77%), Gaps = 13/400 (3%)

Query  10   QSKIAVIGLGYVGLPLAVELAKYYPTVGYDISPKRIEGLEEGHDFTLEVEDEKLQSSLVK  69
            + +IAV+GLGYVGLP+AV +++    +G+DI+  RI  L +  D T EV ++KL+++ + 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-  60

Query  70   SSIGLDHKGKGFLPSNDVSEISSCNIFIVTVPTPINEHKTPDLQPLIAASTMLGKLLKKG  129
                       +  +++  ++   +++I++VPTPI+ H+ PDL PL+ AS  +GK++  +
Sbjct  61   ----------EY--TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPD  108

Query  130  DVVIYESTTYPGCTEEDCVPILERESGLIFNQDFYCGYSPERINPGDKVNTLTKIKKVTS  189
             +V+YEST YPG TEE+CVP+LE+ SGL+  +DF+ GYSPERINPGDKV+T+  I KV S
Sbjct  109  TIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVS  168

Query  190  GSTPEVADYVNELYASIIEAGTYKASSIKVAEASKAIENAQRDVNISFVNELALIFDRLG  249
            G T EV + V ++Y+S++ AG  KASSIKVAEA+K IEN+QRDVNI+++NELA+IFD+L+
Sbjct  169  GQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLD  228

Query  250  IDTNEVLEAAGTKWNFLKYKPGLVGGHCIGVDPYYLAHKAEQVGYHPAVILSGRRVNDNM  309
            IDTNEVL A+GTKWNFL++KPGLVGGHCIGVDPYYL+HKA++VG HP VIL+GRR+NDNM
Sbjct  229  IDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNM  288

Query  310  GMFVANKVIKLMIQKGKTIKGSKALILGFTFKENCPDIRNTRVIDIYKELNQFGLEVDVY  369
            + ++A++VIK ++++G  ++G+   +LG+TFKENCPD+RNT+VI+I  EL+++GL+V V 
Sbjct  289  AKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVN  348

Query  370  DPWASREEVQEEYGIQLTSKNKLSKYDAVILAVGHKEFSD  409
            D  A ++E +  +G++L   + L   D V++AV HK++ +
Sbjct  349  DVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVPHKDYME  388

323) Odosp_3555 in NC_015160


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  359 bits (1348),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 214/400 (54%), Positives = 301/400 (76%), Gaps = 13/400 (3%)

Query  22   FATKYAVVGFDLKKERIEALNRGIDRTLEVSEEVMKSVLRPSVPKRGEKGLYCSCDPEDL  81
            F+ K  V+GFD++  RI  L+   DRT EV+E+ +K           +  +  + ++EDL
Sbjct  21   FGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-----------NTNIEYTSNAEDL  69

Query  82   RDCNYYIITVPTPVDKHNRPDLTPLIRASETVGQVIVRGDIVIYESTVYPGATEEDCIPV  141
            +  ++ II+VPTP+DKHN+PDL PL++ASETVG+VI  + IV+YESTVYPGATEE+C+PV
Sbjct  70   KKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPV  129

Query  142  IERVSGLKYNVDFFAGYSPERINPGDKQHTVEKIKKVTSGSTPGVAEKVNALYHSVIVAG  201
            +E+ SGL    DFF GYSPERINPGDK HT E I KV SG T  V E V  +Y SV+ AG
Sbjct  130  LEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAG  189

Query  202  THLAPSIRVAEAAKVIENSQRDINIAFVNELSKIFNLMHIDTQAVLEAAATKWNFLSFRP  261
             H A+SI+VAEAAKVIEN+QRD+NIA++NEL+ IF+ ++IDT+ VL A++TKWNFL+F+P
Sbjct  190  VHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKP  249

Query  262  GLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSMGEYVAKQTLKCMIRKGQCIKG  321
            GLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M+ Y+A + +K ++++G  ++G
Sbjct  250  GLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQG  309

Query  322  SKVLVLGITFKENCPDVRNTKVVDIIAALKEFDLEVDVYDPWASPEEVRKVYGLEMKNTL  381
            + V VLG+TFKENCPD+RNTKV++II  LKE++L+V V D  A  +E +K +GL++ +T 
Sbjct  310  ATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTK  369

Query  382  PAEKYEAVVLAVAHQVF--RSLQLRELCKENGIVYDVKSV  419
                 + V++AV+H+ +     +  +L K+ GIV+D+K++
Sbjct  370  ELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGI  409

324) Fluta_2063 in NC_015321


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  359 bits (1349),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 225/425 (53%), Positives = 318/425 (75%), Gaps = 10/425 (2%)

Query  15   KLAVIGLGYVGLPIALEFAKKIKVVGFDINQARVDLMRNKKDPSNELDATAFENCDIHFT  74
            ++AV+GLGYVGLP+A+ F++K KV+GFDIN++R+  ++N+ D +NE+    + N +I++T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  75   ADLEDLKDVQFFIVAVPTPIDDANLPDLKPLLGASRSVAQALKKGDYVVFESTVYPGCTE  134
            ++ EDLK  +F+I+AVPTPID  N PDL PLL AS +V++ +  +  VV+ESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  135  EDCIPVLEELSGLTFMEDFKVGYSPERINPGDKEHTLQNVVKVVSGCGAESLEEIAKTYE  194
            E+C+PVLE  SGL    DF VGYSPERINPGDK HT++ + KVVSG   E LE +A  Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  195  LVVDAGVHRAASIKVAEAAKIIENTQRDVNIALINELSIIFNRLGINTYDVLEAAGTKWN  254
             VV AGVH+A+SIKVAEAAK+IENTQRDVNIAL+NEL+IIF++L+I+T +VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  255  FLRFSPGLVGGHCIGVDPYYLTHKAQQAGYHAKIINSGRYVNDSMGFYIGKQTTKKIIAQ  314
            FL F PGLVGGHCIGVDPYYLTHKAQ+ G H+ +I +GR +ND+M+ YI+ +  K ++ Q
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  315  GKHIQDAKVLVMGATFKEDVSDIRNSKVIDVVNELKSFQVKVDLVDPHASSEEMEHEYGV  374
            G ++Q+A V V+G TFKE+ +D+RN+KVI++++ELK + ++V + D +A  +E    +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  375  SLVEIG--KDYDAIIVAVNHRDYKNLDETYFKSLMKDGQGVFVDIKGIYKGKINDLE---  429
             L++    K  D ++ AV H+DY +    Y+ +L+KD   VF DIKGI ++  ++L+   
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVF-DIKGIINS--DELNVSQ  419

Query  430  -YWSL  433
              W L
Sbjct  420  RLWRL  424

325) SUN_1555 in NC_009663


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  358 bits (1346),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 232/433 (54%), Positives = 322/433 (75%), Gaps = 20/433 (4%)

Query  1    MNYKIAVIGLGYVGLPLAHAFSKKYEVVGFDINKERIDELNTGYDSTLELDKNQMKEALE  60
            MN +IAV+GLGYVGLP+A +F++K  V+GFDIN  RI EL+  YD T E+  N++K++  
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT--  58

Query  61   NGMQFKTQPEEIAGCNIYIVTVPTPIDSSNRPDLTPLVKSSESVGEILKKGDIVIYESTV  120
              +++ +++E++   ++ I++VPTPID  N+PDL PL+K+SE+VG ++  + IV+YESTV
Sbjct  59   -NIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTV  117

Query  121  YPGVTEEICVPVLEKVSGQKFNEDFFCGYSPERINPGDKEHTVTKILKVTSGSTPEVAKI  180
            YPG TEE CVPVLEK SG     DFF GYSPERINPGDK HT   I KV SG T EV  I
Sbjct  118  YPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEI  177

Query  181  VDDLYKSIITAGTYLASSIKVAEASKVIENTQRDVNIALINELALIFDTMDIDTREVIEA  240
            V D+Y S++TAG   ASSIKVAEA+KVIENTQRDVNIAL+NELA+IFD +DIDT EV+ A
Sbjct  178  VADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKA  237

Query  241  AATKWNFIKLTPGLVGGHCIGVDPYYLTYKAQELGYKPNLILGARQINNSMSKYIAERTI  300
            ++TKWNF+++ PGLVGGHCIGVDPYYLT KAQE+G  P++IL++R+IN++M+KYIA   I
Sbjct  238  SGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVI  297

Query  301  KEMIAHDKKIKDANVLVLGLTFKEDCPDIRNSKVFDIIDELSDYGCIVDAYDPWVEKKDI  360
            KE++ ++  +++A V VLGLTFKE+CPD+RN+KV++II+EL +YG  V   D   +K++ 
Sbjct  298  KELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNE-  356

Query  361  IQNNFTFIADPFQSD--KKYDAVIVAVGHKEFKVLERGNYDCISITK--PVLIDIKGIIE  416
              ++F F  D +++   K  D V+ AV HK++   ++ +Y  I++ K   +++DIKGII+
Sbjct  357  -AKKF-FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDY--INLVKDCGIVFDIKGIIN  411

Query  417  NPT-------WRL  422
            +         WRL
Sbjct  412  SDELNVSQRLWRL  424

326) F7308_0763 in NC_015696


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  358 bits (1345),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 230/431 (54%), Positives = 312/431 (73%), Gaps = 14/431 (3%)

Query  1    MSKKICVVGLGYVGLPLAHAFAKKFDVVGFDISKSRIAELERCYDRTLELTTEQLEDIKD  60
            M+++I VVGLGYVGLP+A +F++K  V+GFDI+ SRI EL   YDRT E+T ++L + + 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-  59

Query  61   VITYTCDIDVAKDCNVYIVTVPTPIDSMNNPDLTPLRDASLIVGSVLKENDIVIYESTVY  120
             I YT + +  K  +  I++VPTPID  N+PDL PL  AS  VG V+  + IV+YESTVY
Sbjct  60   -IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVY  118

Query  121  PGVTEEVCVPYLEDRSGLVFNKDFFCGYSPERINPGDKEHTVTNILKITSGSTPEVATIV  180
            PG TEE CVP LE  SGLV  KDFF GYSPERINPGDK HT   I K+ SG T EV  IV
Sbjct  119  PGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIV  178

Query  181  DDLYNAIIVAGTHKASSIRVAEAAKVIENTQRDVNIALINELAMIFDSMGIPTHDVIEAA  240
             D+Y++++ AG HKASSI+VAEAAKVIENTQRDVNIAL+NELA+IFD ++I T++V+ A+
Sbjct  179  ADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKAS  238

Query  241  GTKWNFIKLKPGLVGGHCIGVDPYYLTYKAEELGYKPNLILGARQINNGMGKYIAEKTVK  300
            GTKWNF+++KPGLVGGHCIGVDPYYLT KA+E+G  P++IL++R+IN+ M+KYIA + +K
Sbjct  239  GTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIK  298

Query  301  LMIKERKHVCESNVLVLGFAFKEDCPDTRNTKVVDIITNLKEFGVNVSVFDPQMDEADEK  360
             ++K+  +V  + V VLG++FKE+CPD RNTKV++II +LKE+G+NV+V D + D  + K
Sbjct  299  ELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  361  HYPNIKFIKNPFGGKTTYDSVVVAVGHREFKMYSTMDYKALFAKDDKPVLVDVKGILKDY  420
             +  + +I          D V+ AV H+++ M +  DY  L    D  ++ D+KGI++  
Sbjct  359  KFFGLDLIDTK--ELKMVDVVLFAVPHKDY-MENKKDYINLV--KDCGIVFDIKGIINSD  413

Query  421  N-------WRL  424
            +       WRL
Sbjct  414  ELNVSQRLWRL  424

327) Odosp_0958 in NC_015160


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  358 bits (1343),  Expect = 4e-100, Method: Compositional matrix adjust.
 Identities = 209/364 (58%), Positives = 287/364 (79%), Gaps = 0/364 (0%)

Query  11   RLALVGLGYVGLPIALEFAKKISVIGFDINEERLTMMRQGIDPCKELDSEAFENADIEFT  70
             +A+VGLGYVGLP+A+ F++K  VIGFDINE R+  +++  D  +E+  + + N++IE+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  71   SSIDELRKASFFIVAVPTPIDDHNQPDLTPLLGATRSVAKALKKGDYVVYESTVYPGCTE  130
            S+ ++L+KA F+I+AVPTPID HN+PDL PLL A+ +V+K +  +  VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  131  EDCIPVLEEISGLKAGVDFKFGYSPERINPGEKVHTLPNTVKIVSGCDPEALDTIAKVYE  190
            E+C+PVLE  SGL  G DF  GYSPERINPG+KVHT+    K+VSG   E L+ +A VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  191  LVVKPGVHRAPNVKVAEAAKIIENTQRDVNIALMNELSIIFSRIGINTYDVLEAAGTKWN  250
             VV +GVH+A+++KVAEAAK+IENTQRDVNIALMNEL+IIF +++I+T +VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  251  FLKFYPGLVGGHCIGVDPYYLVYKANELKYHSQIISAGRFINDTMGGYIAKKLVKKLIGM  310
            FL+F PGLVGGHCIGVDPYYL  KA+E+  H+++I AGR IND M+ YIA +++K L+  
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  311  GKAILGARILVMGMTFKENVADIRNSKVVDIINELKDFGVEVDVVDPYADPEEVKKMYGF  370
            G  + GA + V+G+TFKEN +D+RN+KV++II+ELK++G++V V D  AD +E KK +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  371  RLIE  374
             LI+
Sbjct  364  DLID  367

328) Cpin_4763 in NC_013132


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  358 bits (1344),  Expect = 4e-100, Method: Compositional matrix adjust.
 Identities = 216/423 (52%), Positives = 322/423 (77%), Gaps = 13/423 (3%)

Query  16   NASIAIIGLGYVGLPLAIEFAKKYRTLGFDINEVRVRELTVGKDRTREANIEELKRVtaa  75
            N +IA++GLGYVGLP+A+ F++K + +GFDINE R++EL    DRT E   + LK     
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  76   aagtsgtgltlssVKNDLQTCNIFIVTVPTPIDDFKAPDLGPLLKASEMLGSVLKAGDIV  135
             ++ +          +DL+  +++I++VPTPID  + PDL PLLKASE +G V+ ++ IV
Sbjct  62   YTSNA----------EDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIV  111

Query  136  IYESTVYPGCTEEDCVPVLEKTSGLTFNKDFFAGYSPERINPGDKVNTLTRIKKVTSGST  195
            +YESTVYPG TEE+CVPVLEK SGL   KDFF GYSPERINPGDKV+T+  I KV SG T
Sbjct  112  VYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQT  171

Query  196  PEIAEKVDALYRSIIEAGTHKASSIKVAEASKAIENAQRDVNISFVNELALIFDRIGIDT  255
             E+ E V  +Y S++ AG HKASSIKVAEA+K IEN+QRDVNI+++NELA+IFD+++IDT
Sbjct  172  LEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDT  231

Query  256  NDVIEAAGTKWNFLKYKPGLVGGHCIGVDPYYLAHKAQALGYHPQVILSGRRVNDNVGNF  315
            N+V+ A+GTKWNFL++KPGLVGGHCIGVDPYYL+HKAQ +G HP+VIL+GRR+NDN++++
Sbjct  232  NEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKY  291

Query  316  VANKVVKLMIEKDHKIKGSRALIMGITFKENCPDVRNTRVVDIYEELKQFGLEVDIYDPW  375
            +A++V+K ++ ++  ++G+   ++G+TFKENCPD+RNT+V++I EELK++GL+V + D  
Sbjct  292  IASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVE  351

Query  376  ADveevrnvyevevqneLDQTVSYDAIIVAVAHDEFL--TLDYGKIKSDNAVIFDTRSCL  433
            AD +E ++ + +++ +  +  +  D ++ AV+H +++    DY ++  D +++FD ++ +
Sbjct  352  ADKNEAKKFFGLDLIDTKELKMV-DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGII  410

Query  434  DRN  436
            + +
Sbjct  411  NSD  413

329) Halhy_5450 in NC_015510


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 210/413 (51%), Positives = 313/413 (76%), Gaps = 2/413 (0%)

Query  9    EKTIAVIGLGYVGLPLALELAKHFRVIGFDINVERVALMQQGLDPTRELDASVFQHVDVQ  68
            ++ IAV+GLGYVGLP+A+ +++  +VIGFDIN  R+  +++  D T E+  + +++ +++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  69   FTADPADLRNAHFFIIAVPTDINEHKVPNLIPLQKASESVGKALKPGDYVVYESTVYPGC  128
            +T+++ DL++A+F+IIAVPT I+ H+ P+L+PL KASE+VGK + P+  VVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  129  TEEDCLPILEQYSGLKAPEDFKIGYSPERINPGDKTRPLATILKVVSGCDAPALETIAKV  188
            TEE+C+P+LE+YSGL    DF +GYSPERINPGDK + + TI KVVSG     LE +A V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  189  YGLIITAGIYEAPSIKVAEAAKVIENIQRDLNISLVNELAMVFDKMDIDTNAVLAAAATK  248
            Y+ ++TAG+  A+SIKVAEAAKVIEN QRD+NI+L+NELA++FDK+DIDTN VL A++TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  249  WNFHRYSPGLVGGHCIGVDPYYLLHKARQLGIEPQVIAAGRRINDAMPVWIAKNLVQTLL  308
            WNF  + PGLVGGHCIGVDPYYL HKA+++G +P+VI AGRRIND M+  IA N+++ LL
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  309  QKGKNPSSSKVLVMGITFKEDVADIRNSKVVDLVKELMSYSIHVQITDPWASPNEVAHEY  368
            ++G +  ++ V V+G+TFKE+ +D+RN+KV++++ EL  Y+++V + D  A  NE    +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  369  KLSLTEQVG-KNYDAIVLAVGHQEYKKLSMDYFKEVSHGELIFFDLKGLFQQQ  420
             L L +    K  D +++AV H++Y     DY++ V +  ++ FD+KG+++ +
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIV-FDIKGIINSD  413

330) HMPREF0659_A5908 in NC_014370


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  357 bits (1340),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 218/415 (53%), Positives = 317/415 (77%), Gaps = 8/415 (1%)

Query  7    KIAVIGLGYVGLPLARLFSTKFKTVGFDMNQGRVDALMAGHDATLEVSDELLQSAIKNGF  66
            +IAV+GLGYVGLP+A  F+ K K +GFD+N++R+  L    D T EV+++ L+++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  67   LCTTNLEDIRDCNFYVVAVPTPVDVNNRPDLKPLWGASETVGKVISKGDIVVYESTVYPG  126
              T+N ED++  +F ++AVPTP+D +N+PDL PL  ASETVGKVI+ + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  127  VTEEECLPVVEKVSGLTFNKDFFAGYSPERINPGDKEHTVEKIKKVTSGSTPEIADLVDN  186
             TEEEC+PV+EK SGL   KDFF GYSPERINPGDK HT E I KV SG T E+ ++V +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  187  VYNAVLINGTHKAPSIKVAEASKIIENSQRDVNIAFMNELAKIFNAMGIDTRDVIDAAAS  246
            VY++V+  G HKA+SIKVAEA+K+IEN+QRDVNIA+MNELA IF+ ++IDT +V+ A+++
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  247  KWNFIKLNPGLVGGHCISVDPYYLIQKAQVYGVLPRIMSAARRLNDGMGDYVANQTIKMM  306
            KWNF++++PGLVGGHCI+VDPYYL +KAQ  G  P ++ A+RR+ND M+ Y+A++ IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  307  NKKGALVKDSNILILGITFKENCPDVRNTKVVDIYSTLSEYTSNITVLDPWANVERVKKE  366
             K+G  V+++ + +LG+TFKENCPD+RNTKV++I   L EY  N+TV D  A+ +  KK 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  367  YGIDAVASLPKD-KKYDAIILAVSHKQFADT--DWREKLNENGVIYDVKGFLNRD  418
            +G+D + +  K+ K  D +++AV+HK++ +   D  + +++ G+++D+KG++N D
Sbjct  361  FGLDLIDT--KELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

331) BBR47_57510 in NC_012491


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  357 bits (1340),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 214/425 (51%), Positives = 315/425 (75%), Gaps = 4/425 (0%)

Query  13   KIAVVGLGYVGLPIAMALSKRASVIGFDVNKEKVAAYQKGTLHDADVDQELTSEATIEFT  72
            +IAVVGLGYVGLP+A++++++  VIGFD+N  ++   ++   +  +V ++   ++ IE+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDENRLQEARFFIVAVPTPVKNGNVPDLKYVESASRMVGRQLKKGSVVVFESTVYPGATE  132
            S+ + L+ A F+I+AVPTP+ + N PDL  +  AS  VG+ +  +++VV+ESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DVCLPILETESGMRCGIDFKIGYSPERINPGDKVNRLENIVKIVSGMDEETLGIVANVYE  192
            + C+P+LE  SG+ CG DF +GYSPERINPGDKV+ +E I K+VSG   E L IVA+VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  LVIKAGVYRAESIKVAEAAKVIENAQRDVNIAFMNELAMLFNQMDIPTKAVLQAAGTKWN  252
             V+ AGV +A SIKVAEAAKVIEN+QRDVNIA+MNELA++F+++DI T+ VL+A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLPFTPGLVGGHCIGIDPYYLTYKAEDSGYRSRIILAARHINDGMGKYIAQQIIKMAVRA  312
            FL F PGLVGGHCIG+DPYYLT KA++ G ++ +ILA+R+IND M+KYIA ++IK  ++ 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  KLDLQNVRIGILGLSYKEDCADIRNTKVTDIIGELKEYGMNPLVVDPMVNPREAFEEYGI  372
             L++Q   + +LGL++KE+C+D+RNTKV +II ELKEYG+N  V D   +  EA   +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELSEMKALHDLDIVVVAVPHAPFAQMEVADFATMYGKNAAKIMIDIKEIYSKADFVNSGF  432
            +L + K L  +D+V+ AVPH  + + +  D+  +  K+ + I++DIK I +  ++ N + 
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYME-NKKDYINL-VKDCG-IVFDIKGIINSDEL-NVSQ  419

Query  433  HYWSL  437
            + W L
Sbjct  420  RLWRL  424

332) BDI_2219 in NC_009615


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  356 bits (1338),  Expect = 9e-100, Method: Compositional matrix adjust.
 Identities = 213/413 (52%), Positives = 312/413 (76%), Gaps = 5/413 (1%)

Query  5    KIAVIGLGYVGLPLARLFSTKFATVGFDMNQARVDALMTGHDATLEVDDCLLQDAIANGF  64
            +IAV+GLGYVGLP+A  F+ K   +GFD+N++R+  L    D T EV +  L+++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  65   KCTTDLEEIRDCNFYVVAVPTPVDDNNRPDLKPLWGASETVGKVISKGDIVVYESTVYPG  124
              T++ E+++  +F ++AVPTP+D +N+PDL PL  ASETVGKVI+ + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  VTEEECLPVVERISGLKFNEDFFAGYSPERINPGDKEHTVEKIKKVTSGSTPEIADIVDS  184
             TEEEC+PV+E+ SGL    DFF GYSPERINPGDK HT E I KV SG T E+ +IV  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  VYNAVLVNGTHKAPSIKVAEASKIIENSQRDVNIAFMNELAKIFNAMGIDTHDVIEAAAS  244
            VY++V+  G HKA+SIKVAEA+K+IEN+QRDVNIA+MNELA IF+ ++IDT++V+ A+++
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFIKLNPGLVGGHCISVDPYYLIQKAQVYGVLPRIMFSARRLNDGMGAYVANQTIKCM  304
            KWNF++++PGLVGGHCI+VDPYYL +KAQ  G  P +++++RR+ND M+ Y+A++ IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  NKKGVMVKNAKILLMGVTFKENCPDVRNTKIVDIYTTLQEYTNNVTVYDPWANADVVKHE  364
             K+G+ V+ A + ++G+TFKENCPD+RNTK+++I   L+EY  NVTV D  A+ +  K  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGIDITTELPIEKFDAVILGVAHKQFLEL--DVKSLVKEGGVIYDVKGLLPRD  415
            +G+D+     +   D V+++V+HK+++E   D  +LVK+ G+++D+KG++  D
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

333) Hipma_0176 in NC_015318


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  355 bits (1334),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 221/424 (53%), Positives = 308/424 (73%), Gaps = 2/424 (0%)

Query  10   EKIIAVIGLGYVGMPLLYHLSKYFKTIGFDVKRERVEELKKGIDSTGELEGVDFLKNGIE  69
            ++ IAV+GLGYVG+P+   +++  K IGFD++  R+ ELK+  D T E+    + +  IE
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  70   FSCDESVLDEADVFIVAVPTPIDKHKLPDLRPLRSATNTVARHIKKGSIVVYESTVYPFA  129
            ++ +   L  AD +I+AVPTPIDKH+ PDL PL  A++TV++ I  ++IVVYESTVYP A
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  130  TKEECVPILENVSNLRYCQDFFVGYSPERINPGDKVHTPDKITKIVSGCNQETAELLAKI  189
            T EECVP+LE+ S L   +DFFVGYSPERINPGDKVHT + ITK+VSG   E  E++A +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  190  YGQINNNNIFIAESIEVAEAAKVIENTQRDINIALMNELSKIFNMMGINTYAVLNAAKTK  249
            Y+ +    +  A SI VAEAAKVIENTQRD+NIALMNEL+ IF+ ++I+T  VL+A+ TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  250  WNFLAFEPGLVGGHCIGVDPYYLTYKAQEIGYHPEVILSGRRINDSMGEYVAKEAVKKLI  309
            WNFL F PGLVGGHCIGVDPYYLT KAQE+G HPEVIL+GRRIND+M+ Y+A + +K L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  310  KSGRTILSSRALILGITFKENVPDIRNSRVIDIVRELEEFGVVVDVFDPLADEKEVKNEY  369
            K G  + ++   +LG+TFKEN PD+RN++VI+I+ EL E+G+ V V D  AD +E K+ +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  370  GIELRRREQLRSNYDLVVLAVKHKDLLDEIDKWINLTDKGGVFVDIKGVVDKNKVK-NAI  428
            G++L    +L+   D+V++AV HKD +++    INL    G+  DIKG+++ + ++ +  
Sbjct  362  GLDLIDTKELKMV-DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELNVSQR  420

Query  429  YWSL  432
             W L
Sbjct  421  LWRL  424

334) CYCME_1414 in NC_021917


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  355 bits (1333),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 212/416 (51%), Positives = 315/416 (76%), Gaps = 3/416 (0%)

Query  17   SIGIIGLGYVGLPLAIEFGKKFPTIGYDINATRINELKSGKDITLEANSCEIDEATLLKF  76
            +I+++GLGYVGLP+A+ FG+K   IG+DIN +RI+ELK+  D T E     + ++ +  +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EY  62

Query  77   TCDSSELEKCNIYIVTVPTPIDGSKNPDLSPVISASHIVGKHLSKNDLVIYESTVYPGAT  136
            T ++ +L K ++ I++VPTPID  ++PDL P++ AS+ VGK ++ + +V+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  137  EDVCVPILEMASKLIFNKDFYCGYSPERINPGDKHRKLTNILKITSGSTPEIANTVDHLY  196
            E+ CVP+LE  S L+  KDF+ GYSPERINPGDK + +  I K+ SG T E+ + V ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  197  QSIITAGTFKTTSIKVAEAAKVIENTQRDINIALVNELALIFNRVGIDTEEVLEAAGTKW  256
             S++TAG  K++SIKVAEAAKVIENTQRD+NIAL+NELA+IF++++IDT+EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  257  NFLPFRPGLVGGHCIGVDPYYLVHKAETLGYHPQLISSGRRINDNMGHFVVSEVVKLMAR  316
            NFL F+PGLVGGHCIGVDPYYL HKA+ +G HP++I +GRRINDNM+ ++ S+V+K + +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  317  KKLNIVDAKILMLGLTFKENCPDLRNTRVVEMIDELTNTYNAIVDVFDPWVNKQEAQAVY  376
            + L++ +A + +LGLTFKENCPDLRNT+V+++I+EL + Y   V V D   +K+EA+  +
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKE-YGLNVTVNDVEADKNEAKKFF  361

Query  377  NLNLIDQPTTGHYDAMIVAVSHDQFKELGIEGVKSLGKEKHVLYDIKYLFPSDGVD  432
             L+LID       D ++ AV+H ++ E   + + +L K+  +++DIK ++ SD ++
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

335) Echvi_4406 in NC_019904


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  354 bits (1331),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 222/426 (53%), Positives = 317/426 (75%), Gaps = 20/426 (4%)

Query  12   NIAVIGLGYVGLPLAVEFAKKYPVTGFDISGPRVEELSKGKDHTLEVEDELLRSVLVNDK  71
            NIAV+GLGYVGLP+AV F++K  V GFDI+ +R+ EL +  D+T EV ++ L++  ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE--  61

Query  72   NELGDGATGFYPTCSERDIADCNVYIVTVPTPTDKHNRPVLTPMLKASKAIGKVLKKGDV  131
                      Y + +E D+   +  I++VPTP DKHN+P L P+LKAS ++GKV+  + +
Sbjct  62   ----------YTSNAE-DLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTI  110

Query  132  VIYESTVYPGVTEEECVPVLEKGSGLKFNQDFFVGYSPERINPGDKEHTVAKILKVTSGS  191
            V+YESTVYPG TEEECVPVLEK SGL   +DFFVGYSPERINPGDK HT   I KV SG 
Sbjct  111  VVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQ  170

Query  192  CPEAAEFIDGLYRSVITAGTFKASSIKVAEAAKVIENSQRDINIAFVNELSKIFNLLHID  251
              E  E++ ++Y SV+TAG  KASSIKVAEAAKVIEN+QRD+NIA++NEL+ IF+ L+ID
Sbjct  171  TLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDID  230

Query  252  TQEVLEAAGTKWNFLPFRPGLVGGHCIGVDPFYLAQKAQEVGYHPEIILAGRRLNDSMGK  311
            T+EVL A+GTKWNFL F+PGLVGGHCIGVDP+YL++KAQEVG HPE+ILAGRR+ND+M+K
Sbjct  231  TNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAK  290

Query  312  HVATEVIKHMMRKDLKVMESKVLILGFTFKEDCPDVRNTRVIDIYRELENFDIHVDVYDP  371
             +A++VIK++++++L V  + V +LG+TFKE+CPD+RNT+VI+I  EL +++++V V D 
Sbjct  291  YIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDV  350

Query  372  WANPSEVAHEYHIQVLDRDQQPDLSGYSAIILAVAHQEF----KTWTIQKSDKQVVYDVK  427
             A+ +E    + ++++D     +L     +++AV+H+++    K       D  +V+D+K
Sbjct  351  EADKNEAKKFFGLDLIDTK---ELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIK  407

Query  428  GMLDKG  433
            G+++ +
Sbjct  408  GIINSD  413

336) OB2931 in NC_004193


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  354 bits (1330),  Expect = 5e-99, Method: Compositional matrix adjust.
 Identities = 234/425 (56%), Positives = 334/425 (79%), Gaps = 4/425 (0%)

Query  13   KIAVIGLGYVGLPLAVELAKKYDVIGLDLNKEKLAQYSNGIDVTAEVGNEALKQTTLEFT  72
            +IAV+GLGYVGLP+AV +++K  VIG+D+N  ++ +  N  D T EV ++ LK+T +E+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDETRLKECKFHIVAVPTPINTDKTPNLKPVIGASESVGRNISKGSIVVYESTVYPGTTE  132
            S+   LK   F I+AVPTPI+ ++ P+L P++ ASE+VG+ I+ ++IVVYESTVYPG+TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EICIPILEEKSGLKFGQDFKVGYSPERINPGDKVNTLVSITKVVSGSDEDALKEISSLYG  192
            E C+P+LE  SGL  G+DF VGYSPERINPGDKV+T+ +ITKVVSG   + L  ++ +Y+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  SIIEAGVFEAESIKVAEAAKVIENSQRDINIAFMNELSMVFNKMDIDTKAVLEAAGTKWN  252
            S++ AGV  A SIKVAEAAKVIEN+QRD+NIA+MNEL+++F+K+DIDT+ VL A+GTKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLNFTPGLVGGHCIGVDPYYFTYKAEQLGYHSQIILSGRKINDDMGKYIAGNiikkmiks  312
            FLNF PGLVGGHCIGVDPYY+T KA+++G H+++IL+GR+IND+M+KYIA+N+IK ++K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  kieiDGARVAILGLTFKENVGDVRNTKVNDIVTELEEYGVNVIVHDPVAEGQEVKKVFGI  372
             +E++GA V +LGLTFKEN  D+RNTKV +I+ EL EYG+NV V+D  A+ +E KK FG+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  elaeeddlqdldavvlavPHQHYKELNVNKINTMYRQDNKKVFIDIKGSLDKNDFYQAGY  432
            +L +  +L+ +D V++AVPH++Y E + + IN +  +D   VF DIKG ++ +++ + + 
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKDYINLV--KDCGIVF-DIKGIINSDEL-NVSQ  419

Query  433  SYWSL  437
              W L
Sbjct  420  RLWRL  424

337) K734_02785 in NC_021286


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  354 bits (1329),  Expect = 5e-99, Method: Compositional matrix adjust.
 Identities = 222/414 (54%), Positives = 312/414 (76%), Gaps = 7/414 (1%)

Query  1    MKDKICVIGMGYVGLPLAVAFAEKYSVVGFDINFSRVQELEAGQDSTLEVSSKELQAVKD  60
            M+ +I V+G+GYVGLP+AV+F++K  V+GFDIN SR++EL    D T EV+ + L+  + 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-  59

Query  61   LLKFTNNAADIRDANIYIVTVPTPIDRSNKPDLSPLEKASETVGSVLKAKDIVIYESTVY  120
             + +T+NA D++ A++ I++VPTPID+ NKPDL PL KASETVG V+ +  IV+YESTVY
Sbjct  60   -IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVY  118

Query  121  PGVTEEVCVPVLEKVSKLSYNQDFFCGYSPERINPGDKQHTVKNILKVTSGSTPETAERV  180
            PG TEE CVPVLEK S L   +DFF GYSPERINPGDK HT   I KV SG T E  E V
Sbjct  119  PGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIV  178

Query  181  DALYSSIITAGTHLASSIKVAEASKVIENTQRDVNIALINELAMIFNEMGINTDEVIEAA  240
              +YSS++TAG H ASSIKVAEA+KVIENTQRDVNIAL+NELA+IF+ ++I+T+EV+ A+
Sbjct  179  ADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKAS  238

Query  241  ATKWNFIKLKPGLVGGHCIGVDPYYLTYKAEELGYKPNLILSSRQINNGMGKYVADATIK  300
            +TKWNF+++KPGLVGGHCIGVDPYYLT KA+E+G  P++IL++R+IN+ M+KY+A   IK
Sbjct  239  GTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIK  298

Query  301  ELIDKEKLVKNANVLILGYSFKENCPDVRNTRVVDVVENLYKYGVNVHIHDPWVAKPTST  360
            EL+ +   V+ A V +LG +FKENCPD+RNT+V++++E+L  YG+NV ++D    K  + 
Sbjct  299  ELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  361  D--GLTFVTEVSSKSNFYDAIILAVNHDCFSSYTENDFAKLVRGKFILIDVKSV  412
               GL ++   +   +  D +++AV H  +     +D+ +LV++  I++D+K++
Sbjct  359  KFFGLDLID--TKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGI  409

338) wecC in NC_006512


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  354 bits (1329),  Expect = 5e-99, Method: Compositional matrix adjust.
 Identities = 222/414 (54%), Positives = 312/414 (76%), Gaps = 7/414 (1%)

Query  1    MKDKICVIGMGYVGLPLAVAFAEKYSVVGFDINFSRVQELEAGQDSTLEVSSKELQAVKD  60
            M+ +I V+G+GYVGLP+AV+F++K  V+GFDIN SR++EL    D T EV+ + L+  + 
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-  59

Query  61   LLKFTNNAADIRDANIYIVTVPTPIDRSNKPDLSPLEKASETVGSVLKAKDIVIYESTVY  120
             + +T+NA D++ A++ I++VPTPID+ NKPDL PL KASETVG V+ +  IV+YESTVY
Sbjct  60   -IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVY  118

Query  121  PGVTEEVCVPVLEKVSKLSYNQDFFCGYSPERINPGDKQHTVKNILKVTSGSTPETAERV  180
            PG TEE CVPVLEK S L   +DFF GYSPERINPGDK HT   I KV SG T E  E V
Sbjct  119  PGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIV  178

Query  181  DALYSSIITAGTHLASSIKVAEASKVIENTQRDVNIALINELAMIFNEMGINTDEVIEAA  240
              +YSS++TAG H ASSIKVAEA+KVIENTQRDVNIAL+NELA+IF+ ++I+T+EV+ A+
Sbjct  179  ADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKAS  238

Query  241  ATKWNFIKLKPGLVGGHCIGVDPYYLTYKAEELGYKPNLILSSRQINNGMGKYVADATIK  300
            +TKWNF+++KPGLVGGHCIGVDPYYLT KA+E+G  P++IL++R+IN+ M+KY+A   IK
Sbjct  239  GTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIK  298

Query  301  ELIDKEKLVKNANVLILGYSFKENCPDVRNTRVVDVVENLYKYGVNVHIHDPWVAKPTST  360
            EL+ +   V+ A V +LG +FKENCPD+RNT+V++++E+L  YG+NV ++D    K  + 
Sbjct  299  ELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  361  D--GLTFVTEVSSKSNFYDAIILAVNHDCFSSYTENDFAKLVRGKFILIDVKSV  412
               GL ++   +   +  D +++AV H  +     +D+ +LV++  I++D+K++
Sbjct  359  KFFGLDLID--TKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGI  409

339) AL1_18430 in NC_021030


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  352 bits (1321),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 220/418 (53%), Positives = 304/418 (73%), Gaps = 7/418 (1%)

Query  5    KICVIGLGYVGLPLARLFSTKYETIGFDMNARRCEALMAGHDATLEVSDELLQDAINNYG  64
            +I V+GLGYVGLP+A  F+ K   IGFD+N  R   L    D T EV+++ L+++  +Y 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY-  62

Query  65   FVCTSDIERIKDCNFYVVAVPTPVDENNNPDLAPLYGASTTVGKVISKGDVVVYESTVYP  124
               TS+ E +K  +F ++AVPTP+D +N+PDL PL  AS TVGKVI+ + +VVYESTVYP
Sbjct  63   ---TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  125  GVTEDECIPVVESVSGLKFNEDFFAGYSPERINPGDKQHTVEKIKKVTSGSTPEIGQYVN  184
            G TE+EC+PV+E  SGL    DFF GYSPERINPGDK HT E I KV SG T E+ + V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  185  SVYSSVIIAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELSKIFTRMGIDTQDVLEAAS  244
             VYSSV+ AG H A+SIKVAEAAKVIEN+QRD+NIA++NEL+ IF +++IDT++VL A++
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  245  TKWNFLPFKPGLVGGHCIGVDPYYLAQCAQRHGYNPEIILAGRRMNDGMGEYVADRTVKL  304
            TKWNFL FKPGLVGGHCIGVDPYYL++ AQ  G +PE+ILAGRR+ND M+ Y+A   +K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  305  MIKKGIQVYGSKILILGFTFKENCPDVRNTKVIDIYKALIEYNVQITVYDPWANPEAVCH  364
            ++K+G++V G+ + +LG+TFKENCPD+RNTKVI+I   L EY +++TV D  A+ +    
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  365  EYGIKVINELPAEEKFDAVIVAVAHKKF--ENIDISSYLKDTHIIFDVKATCDRNSID  420
             +G+ +I+        D V+ AV+HK +  ++ D  + +KD  I+FD+K+  + + ++
Sbjct  360  FFGLDLIDT-KELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELN  416

340) SELR_02020 in NC_017068


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  352 bits (1321),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 195/386 (51%), Positives = 302/386 (79%), Gaps = 4/386 (1%)

Query  13   KLAVVGLGYVGLPLAAAFAEKFSVIGFDRNERKIERYKQGHDVTAEIGDKVLQNSAIEFT  72
            ++AVVGLGYVGLP+A +F++K  VIGFD NE +I   K+  D T E+ ++ L+N+ IE+T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   TDPKRLQEASFIVIAVPTPINGDKTPDLAPVKGATETVARQLAKDSIVVYESTVYPGVTE  132
            +++  L+ A FI+IAVPTPI+ ++ PDL P+  A+ETV++ ++ D+IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  DICRPLLE---DLSDNQDFKIGYSPERINPGDKKHRLQNITKIVSAEDADALQDVADVYG  189
            + C P+LE   +L   +DF +GYSPERINPGDK H ++ ITK+VS++  + L+ VADVY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  190  SIIDH-IYKASSIRVAEAAKLVENTQRDINIAFMNELSMVFHEMGIDTEDVAKAMDTKWN  248
            S++   + KASSI+VAEAAK++ENTQRD+NIA+MNEL+++F+ ++IDT++V KA +TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  249  ALGFRPGLVGGHCIGVDPYYFIYEAENLNRHSQMISAGRRINNDMGKFVANEVVKVLLRS  308
             L F+PGLVGGHCIGVDPYY+   A+++ +H+++I AGRRIN++M+K++A++V+K LL+ 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  309  GVDASNANIYLLGMTFKENCPDTRNSRSVDIYNDLREYGLKVKAADPLADRQDFQREYGI  368
            G++   A + +LG+TFKENCPD RN++ ++I ++L+EYGL+V   D  AD+++ ++ +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  369  ELVEEDEIHNADCLVLLVAHEAYRQH  394
            +L++  E+   D +++ V+H  Y ++
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMEN  389

341) LAW_30091 in NC_020130


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  351 bits (1320),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 221/409 (55%), Positives = 311/409 (77%), Gaps = 3/409 (0%)

Query  49   MQLAHHFPAIGFDISKRRIHELLRKYDRTGEISSEVLDNTKASFSYNQTDIHQADIIIIA  108
            + +++    IGFDI+  RI EL  +YDRT E++ + L NT+  ++ N  D+ +AD+IIIA
Sbjct  19   VTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIA  78

Query  109  VPTPIDTYRNPDFTPLIKATQMVARHMRQGCVVVYESTVYPGATEEICIPLLEEVSGLSY  168
            VPTPID   +PD+ PL+KA++ V++ +  + +VVYESTVYPGATEE C+P+LE  SGL  
Sbjct  79   VPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVC  138

Query  169  LTDFTVGYSPERINPGDTIHTLENIVKVVSGSDKATTDLLTALYGTFIQAGIHKTSSLKV  228
              DF VGYSPERINPGD +HT+E I KVVSG      ++++ +Y++ + AG+HK+SS+KV
Sbjct  139  GKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKV  198

Query  229  AEAAKVIENTQRDLNIALMNELAIIFDKLDIDTLEVLEAAGTKWNFLPFRPGLVGGHCIG  288
            AEAAKVIENTQRD+NIALMNELAIIFDKLDIDT EVL A+GTKWNFL F+PGLVGGHCIG
Sbjct  199  AEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIG  258

Query  289  VDPYYLTRKAEEVGYHPQVILAGRRINDEMGKYIAETCvkllikknvlinkARVGILGLT  348
            VDPYYLT+KA+EVG HP+VILAGRRIND+M+KYIA   +K L+K+ + ++ A V +LGLT
Sbjct  259  VDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLT  318

Query  349  FKEDVSDLRNTKVIDIVNELEEFGVTPLVHDPLVDAEDALKEYQIVIEEFSVFKQLDALI  408
            FKE+ +DLRNTKVI+I++EL E+G+   V+D   D ++A K + + + +   +K +D ++
Sbjct  319  FKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVL  378

Query  409  LAVPHKIYLHLQPQELLSCFKNINSAVLMDIKGRLNPSDFTEDVLFWRL  457
            +AVPHK Y++ + ++ ++  K  + +++ DIKG +N+ ++     +WRL
Sbjct  379  FAVPHKDYME-NKKDYINLVK--DCGIVFDIKGIINSDELNVSQRLWRL  424

342) LIC093 in NC_008014


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  351 bits (1320),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 221/409 (55%), Positives = 311/409 (77%), Gaps = 3/409 (0%)

Query  49   MQLAHHFPAIGFDISKRRIHELLRKYDRTGEISSEVLDNTKASFSYNQTDIHQADIIIIA  108
            + +++    IGFDI+  RI EL  +YDRT E++ + L NT+  ++ N  D+ +AD+IIIA
Sbjct  19   VTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIA  78

Query  109  VPTPIDTYRNPDFTPLIKATQMVARHMRQGCVVVYESTVYPGATEEICIPLLEEVSGLSY  168
            VPTPID   +PD+ PL+KA++ V++ +  + +VVYESTVYPGATEE C+P+LE  SGL  
Sbjct  79   VPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVC  138

Query  169  LTDFTVGYSPERINPGDTIHTLENIVKVVSGSDKATTDLLTALYGTFIQAGIHKTSSLKV  228
              DF VGYSPERINPGD +HT+E I KVVSG      ++++ +Y++ + AG+HK+SS+KV
Sbjct  139  GKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKV  198

Query  229  AEAAKVIENTQRDLNIALMNELAIIFDKLDIDTLEVLEAAGTKWNFLPFRPGLVGGHCIG  288
            AEAAKVIENTQRD+NIALMNELAIIFDKLDIDT EVL A+GTKWNFL F+PGLVGGHCIG
Sbjct  199  AEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIG  258

Query  289  VDPYYLTRKAEEVGYHPQVILAGRRINDEMGKYIAETCvkllikknvlinkARVGILGLT  348
            VDPYYLT+KA+EVG HP+VILAGRRIND+M+KYIA   +K L+K+ + ++ A V +LGLT
Sbjct  259  VDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLT  318

Query  349  FKEDVSDLRNTKVIDIVNELEEFGVTPLVHDPLVDAEDALKEYQIVIEEFSVFKQLDALI  408
            FKE+ +DLRNTKVI+I++EL E+G+   V+D   D ++A K + + + +   +K +D ++
Sbjct  319  FKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVL  378

Query  409  LAVPHKIYLHLQPQELLSCFKNINSAVLMDIKGRLNPSDFTEDVLFWRL  457
            +AVPHK Y++ + ++ ++  K  + +++ DIKG +N+ ++     +WRL
Sbjct  379  FAVPHKDYME-NKKDYINLVK--DCGIVFDIKGIINSDELNVSQRLWRL  424

343) BF1441 in NC_006347


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  351 bits (1320),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 218/413 (53%), Positives = 311/413 (76%), Gaps = 5/413 (1%)

Query  2    KIAVIGLGYVGLPLARLFSTKYQTIGFDMNQKRVESLMGGHDTTLEVTDVLLQAALDSGF  61
            +IAV+GLGYVGLP+A  F+ K + IGFD+N+ R+  L    D T EVT+  L+   ++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK---NTNI  60

Query  62   KCTSNLEDIRDCNFYVIAVPTPVDRNNRPDLTPLISASETVGKVISKGDIVVYESTVYPG  121
              TSN ED++  +F +IAVPTP+D++N+PDL PL+ ASETVGKVI+ + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  122  VTEEECLPVVERVSGLKFNLDFFAGYSPERINPGDKEHTVEKIKKVTSGSTPEIADIVDK  181
             TEEEC+PV+E+ SGL    DFF GYSPERINPGDK HT E I KV SG T E+ +IV  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  182  VYNSVLINGTHKAPSIRVAEASKIIENSQRDVNIAFMNELAKIFNAMDIDTNDVIEAASS  241
            VY+SV+  G HKA+SI+VAEA+K+IEN+QRDVNIA+MNELA IF+ +DIDTN+V+ A+++
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  242  KWNFIKLRPGLVGGHCISVDPYYLIQKAQVYGVLPRIMSSARRLNDGMGDYVANQVIKLM  301
            KWNF++++PGLVGGHCI+VDPYYL +KAQ  G  P ++ ++RR+ND M+ Y+A++VIK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  302  NKKGVLVKDSNILLLGITFKENCPDIRNTKVVDIYSTLLEYTKNISVYDPWANAEKVYEE  361
             K+G+ V+++ + +LG+TFKENCPD+RNTKV++I   L EY  N++V D  A+ +     
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  362  YGIRMIDNVNEKKYDAIILAVGHNEF--KTIDIKALGNDISVVFDVKCFLDRA  412
            +G+ +ID  + K  D +++AV H+++  +  D   L +D ++VFD+K +++  
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

344) Palpr_0979 in NC_014734


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  349 bits (1309),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 217/419 (52%), Positives = 316/419 (76%), Gaps = 13/419 (3%)

Query  5    RIAVVGLGYVGLPLAIEFGKKYKVLGYDIDKNRVGELQQGVDHTLEADLDGLHEATALCS  64
             IAVVGLGYVGLP+A+ FG+K KV+G+DI+ +R+ EL++  D+T E   + L ++     
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN----  59

Query  65   SNPNFGLSFSSNEIDLKEYNTFIVTVPTPINKFNMPDLKPLIMASEMLGRVISNDAIVIY  124
                  + ++SN  DLK  + +I++VPTPI+K N PDL PL+ ASE +G+VI+ D+IV+Y
Sbjct  60   ------IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVY  113

Query  125  ESTTYPGCTEEDCIPVIEKVSGLKFNKDFYAGYSPERINPGDKVNTLTKIKKVTSGSTPL  184
            EST YPG TEE+C+PV+EK SGL   KDF+ GYSPERINPGDKV+T+  I KV SG T  
Sbjct  114  ESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLE  173

Query  185  IADQVDNLYSSIITAGTHKAPSIKVAEASKIIENAQRDVNISFVNELALIFDKVGIDTND  244
            + + V ++YSS++TAG HKA+SIKVAEA+K+IEN+QRDVNI+++NELA+IFDK++IDTN+
Sbjct  174  VLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNE  233

Query  245  VIDAAGTKWNFLKYRPGLVGGHCISVDPYYLASKAESLGYVPQVILSGRHVNNSIAPFIA  304
            V+ A+GTKWNFL+++PGLVGGHCI+VDPYYL+ KA+ +G  P+VIL+GR++N+++A +IA
Sbjct  234  VLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIA  293

Query  305  NKVLKLMIQKIHAIKGSNVLMLGVTFKENCPDIRNTKVVDIYRELCEFGLNVDIYDPWAS  364
            ++V+K ++++   ++G+ V +LG+TFKENCPD+RNTKV++I  EL E+GLNV + D  A 
Sbjct  294  SNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEAD  353

Query  365  VAEVKHEYgvdiidkvdgkkkydAVLLAVAHDEF--KTIDFEKYYKAGSVVFDAKAVID  421
              E K  +    +      K  D VL+AV+H ++  +  D+ +  K  ++VFD K++I+
Sbjct  354  KNEAKK-FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIIN  411

345) wcfF in NC_003228


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  349 bits (1309),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 213/420 (51%), Positives = 316/420 (76%), Gaps = 9/420 (2%)

Query  5    KIAVIGLGYVGLPLARLFSTKYECIGFDLNQSRVDALNSGHDMTLEVSDDLLRKALENGF  64
            +IAV+GLGYVGLP+A  F+ K   IGFD+N+SR+  L++  D T EV+++ L+++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  65   KCTSNIDEISNCNFYVVAVPTPVDLNNRPDLTPLIGASTTVGKVISKGDIVVYESTVYPG  124
              TSN +++ + +F ++AVPTP+D +N+PDL PL+ AS TVGKVI+ + IVVYESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  VTEEECLPVVEEVSGLTYNVDFYAGYSPERINPGDKEHTVEKIKKVTSGSTPEIADIVDS  184
             TEEEC+PV+E  SGL    DF+ GYSPERINPGDK HT E I KV SG T E+ +IV  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  VYNSVLVNGTHKAPSIKVAEASKIIENSQRDVNIAFMNELSKIFNAMGIDTNDVIEAASS  244
            VY+SV+  G HKA+SIKVAEA+K+IEN+QRDVNIA+MNEL+ IF+ ++IDTN+V+ A+++
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFIKLKPGLVGGHCISVDPYYLIQKAQVYGVLPRIMSAARRLNDGMGDYVANQVIRLM  304
            KWNF+++KPGLVGGHCI+VDPYYL +KAQ  G  P ++ A+RR+ND M+ Y+A++VI+ +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  NKKGILVKDSKILLLGFTFKEDCPDIRNTKVIDIYSTLHEYTSDITVYDAWANSAKVAHE  364
             K+G+ V+++ + +LG+TFKE+CPD+RNTKVI+I   L EY  ++TV D  A+       
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGISILTAGLDNLVGQFDAVVLCVGHKEFRHMNIRGF--LRSDMGVVYDVKAVLSKDIID  422
            +G+ ++ +   ++V   D V++ V HK++ + N +++  L  D G+V+D+K++++ D ++
Sbjct  361  FGLDLIDTKELKMV---DVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELN  416

346) wbgT in NC_020054


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  348 bits (1307),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 202/411 (50%), Positives = 297/411 (73%), Gaps = 10/411 (2%)

Query  19   YVGLPLAIEFGKEWPTIGFDINQVRVDALRKGIDHTREVSEQAFGASQHVRFTGNMADLA  78
            YVGLP+A+ FG+    IGFDIN+ R+  L++  D+T EV+E+ +  + ++ +T+N  DL 
Sbjct  12   YVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEYTSNAEDLK  70

Query  79   ACTVYIVTVPTPIDKYKSPDLTALLAASRMVGAHLKRGDLVVYESTVYPGCTEEDCVPVL  138
                 I++VPTPIDK + PDL +LL AS  VG  +  + +VVYESTVYPG TEE+CVPVL
Sbjct  71   KADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVL  130

Query  139  EAASGLRYNDDFFCGYSPERINPGDKERNVSQILKITSGSTPAAARYVDQLYSRIIKAGT  198
            E  SGL    DFF GYSPERINPGDK +    I K+ SG T      V ++YS ++ AG 
Sbjct  131  EKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGV  190

Query  199  YPAPSIKVAEAAKAIENAQRDVNISFVNELALIFDRLGIDTMDVLEAAATKWNFLKFRPG  258
              A+SIKVAEAAK IEN+QRDVNI+++NELA+IFD+L+IDT +VL A++TKWNFL+F+PG
Sbjct  191  HKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPG  250

Query  259  LVGGHCISVDPYYLAHKAQSVGYHPQVILSGRRVNDDMPIYVANKLVKAMIRAGLSIAGS  318
            LVGGHCI+VDPYYL+HKAQ VG HP+VIL+GRR+ND+M+ Y+A++++K +++ GL + G+
Sbjct  251  LVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGA  310

Query  319  SVLLLGATFKENCPDIRNTKVVDIYQELTGFGMKVDIYDPWASADEVYAEYGIRLVEQPG  378
            +V +LG TFKENCPD+RNTKV++I +EL  +G++V + D  A  +E    +G+ L++   
Sbjct  311  TVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKE  370

Query  379  RCRYDGVILTVAHDEFLT-----LDLQELCRSELSIIYDLKSVLDRTKVSM  424
                D V+++V+H +++      ++L   C    +I++D+K++++   +++
Sbjct  371  LKMVDVVLFAVPHKDYMENKKDYINLVKDC----GIVFDIKGIINSDELNV  417

347) Aeqsu_2222 in NC_018013


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  346 bits (1299),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 216/425 (51%), Positives = 308/425 (73%), Gaps = 13/425 (3%)

Query  30   NPTIAVIGLGYVGLPLAAAFAEKYKVIGYDINSKRISELQQGTDNTlelsseelkkALQQ  89
            N  IAV+GLGYVGLP+A +F++K KVIG+DIN  RI EL++  D T E++        ++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTE-------NK  54

Query  90   TDNSGLLVTDDASKLADATVYIVTVPTPTNKYNQPVLIPLEKASEAVGKYLSEGDVVIYE  149
              N+ +  T +A  L  A   I++VPTP +K N+P L+PL KASE+VGK ++ + +V+YE
Sbjct  55   LKNTNIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYE  114

Query  150  STVYPGVTEDICVPILEEVSKLTFNKNFYAGYSPERINPGDKEHTVTKILKVTSGSTPEA  209
            STVYPG TE+ CVP+LE  S L   K+F+ GYSPERINPGDK HT   I KV SG T E 
Sbjct  115  STVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  210  AKYIDELYASIITAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELSKIFRLLKIDTQDV  269
               + ++Y+S++TAG H A+SIKVAEAAKVIEN+QRD+NIA++NEL+ IF  L IDT++V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  270  LEAAATKWNFLRFTPGLVGGHCIGVDPYYLAQKAQEEGYNPEIILAGRRMNDGMGNYVAQ  329
            L A++TKWNFL F PGLVGGHCIGVDPYYL++KAQE G +PE+ILAGRR+ND M++Y+A 
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  330  EVVKLMIQKECKVKNGHVLVLGITFKENCPDIRNSKVIDVIEALRTYNLNIDVYDPWAKV  389
            +V+K ++++   V+ + V VLG+TFKENCPD+RN+KVI++IE L+ Y LN+ V D  A  
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADK  354

Query  390  TEVSHEFGLRLLSEESQLKNNYEAIILAVSHNEFLKFDIEKYKA---SPSVVFDVKAFFG  446
             E    FGL L+ +  +LK   + +++AV+H++++  +   Y       ++VFD+K+++ 
Sbjct  355  NEAKKFFGLDLI-DTKELKMV-DVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIIN  411

Query  447  RNDID  451
             ++++
Sbjct  412  SDELN  416

348) Suden_1423 in NC_007575


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  346 bits (1301),  Expect = 9e-97, Method: Compositional matrix adjust.
 Identities = 218/429 (51%), Positives = 317/429 (74%), Gaps = 18/429 (4%)

Query  3    KICIIGLGYVGLPLAHAFSKKYEVVGFDINKSRVDELNSGFDRTLELSQTQIKSSLDNGM  62
            +I ++GLGYVGLP+A +F++K  V+GFDIN SR+ EL++ +DRT E+++ ++K++    +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NI  60

Query  63   KVTLNIEDIKDSNIYIVTVPTPIDQTNQPDLTPIIRSTQSVGEVLKEGDIVIYESTVYPG  122
              T N ED+K +++ I++VPTPID+ N+PDL P+++++++VG V+  + IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  VTEEICVPILEEFSGLKFNKTFFCGYSPERINPGDKEHTVENILKITSGSTPEIAKKVDD  182
             TEE CVP+LE +SGL   K FF GYSPERINPGDK HT E I K+ SG T E+   V D
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  183  LYKSIIRAGTHLAPTIKVAEAAKVVENTQRDVNIALINELAMIFDLMNINTYDVIEAAAT  242
            +Y S++ AG H A++IKVAEAAKV+ENTQRDVNIAL+NELA+IFD ++I+T +V+ A++T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNFIKLFPGLVGGHCIGVDPYYLTHKAQSLGYMPNLILGARQINNGMSKLIADKTIKLM  302
            KWNF+++ PGLVGGHCIGVDPYYLTHKAQ +G  P++IL++R+IN+ M+K IA + IK +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  VKFDKKLKNAKILILGVTFKENCPDMRNSKVLDIIKELQEFECYVEVYDYWVDKSDRETK  362
            +K +  ++ A + +LG+TFKENCPD+RN+KV++II EL+E+   V V D  V+    E+K
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVND--VEADKNEAK  358

Query  363  K---LNFIDELPLNSKKYDSIIVAVGHDKFKEISTDDYANMSNAEPIIVDVKGLVE----  415
            K   L++ID   L  K  D ++ AV H  + E +  DY N+ +   I+ D+KG+++    
Sbjct  359  KFFGLDLIDTKEL--KMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDEL  415

Query  416  ---KPTWRL  421
               +  WRL
Sbjct  416  NVSQRLWRL  424

349) capL in NC_018697


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  345 bits (1294),  Expect = 3e-96, Method: Compositional matrix adjust.
 Identities = 206/416 (50%), Positives = 305/416 (74%), Gaps = 2/416 (0%)

Query  1    MTFNVAVIGLGYVGLPLAVELGKQFPTVGFDIDNERISALHKGSDVTLEISAEEISAAKQ  60
            M  N+AV+GLGYVGLP+AV +G++   +GFDI++ RI  L +  D T E++ + +  + +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-N  59

Query  61   LRFTAKADEISAANIYIITVPTPIDNGNNPNLTPIKEATTVVANYLGKGDVVIYESTVYP  120
            + +T++A+++  A++ II+VPTPID+ N+P+L P+  A+  V++ +  + +V+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GATEEVCVPILRQISGLAYNEEFFCGYSPERINPGDKTRSLTSIVKVTSGSTPDAAALVD  180
            GATEE CVP+L + SGL    +FF GYSPERINPGDK +++ +I KV SG T +   +V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  QLYQSIISAGTYKVSSIKVAEASKVIENTQRDINIALMNELAHIFSRIGIDTEEVLEAAG  240
            ++Y S+++AG  K SSIKVAEA+KVIENTQRD+NIALMNELA IF +++IDT+EVL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFRPGLVGGHCIGVDPYYLAHKAETLGYHPQLIAAGRRINDKMGSFVVSEVLKL  300
            TKWNFL F+PGLVGGHCIGVDPYYL+HKA+ +G HP++I AGRRIND+M+ ++ S+V+K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  MAKKRLSIVGANVLIMGLSFKENCPDLRNTRVIGMVEELESYNANVEVYDPWVNVDDLKN  360
            + K+ L + GA V ++GL+FKENCPDLRNT+VI ++EEL  Y  NV V D   + ++ K+
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  361  EQQLKVIKQPTKGSYDAIIIAVSHDQFKALGVNAVRAFGKPNHVLYDIKYLFASNE  416
               L +I        D +++AV+H ++     + +  + K   +++DIK ++ S+E
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

350) CYCME_1892 in NC_021917


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  345 bits (1295),  Expect = 3e-96, Method: Compositional matrix adjust.
 Identities = 207/416 (50%), Positives = 304/416 (74%), Gaps = 2/416 (0%)

Query  1    MTFNVAVIGLGYVGLPLAVELGKQFPTVGFDIDNERISALHKGSDVTLEISAEEISAAKQ  60
            M  N+AV+GLGYVGLP+AV +G++   +GFDI++ RI  L +  D T E++ + +  + +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-N  59

Query  61   LRFTAKADEISAANIYIITVPTPIDNGNNPNLTPIKEATKVVANYLGKGDVVIYESTVYP  120
            + +T++A+++  A++ II+VPTPID+ N+P+L P+  A+  V++ +  + +V+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GATEEVCAPILRQISGLTYNEEFFCGYSPERINPGDKTRSLTSIVKVTSGSTPDTAALVD  180
            GATEE C P+L + SGL    +FF GYSPERINPGDK +++ +I KV SG T +   +V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  QLYQSIISAGTYKVSSIKVAEASKVIENTQRDINIALMNELAHIFSRLGIDTEEVLEAAG  240
            ++Y S+++AG  K SSIKVAEA+KVIENTQRD+NIALMNELA IF +L+IDT+EVL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFRPGLVGGHCIGVDPYYLAHKAETLGYHPQLIAAGRRINDNMGSFVVSEVLKL  300
            TKWNFL F+PGLVGGHCIGVDPYYL+HKA+ +G HP++I AGRRINDNM+ ++ S+V+K 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  MAKKRLSIVGANVLIMGLSFKENCPDLRNTRVIGMVEELESYNANVEVYDPWVNVDDLKN  360
            + K+ L + GA V ++GL+FKENCPDLRNT+VI ++EEL  Y  NV V D   + ++ K+
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  361  EQQLKVIKQPTKGSYDAIIIAVSHDQFKALGVNAVRAFGKPNHVLYDIKYLFASNE  416
               L +I        D +++AV+H ++     + +  + K   +++DIK ++ S+E
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDE  414

351) THEYE_A0424 in NC_011296


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  343 bits (1286),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 219/425 (52%), Positives = 312/425 (74%), Gaps = 4/425 (0%)

Query  13   KILIIGLGYVGLPLAVAMAKYFNIVGFDRNSQRIKDLKKGLDSTGEVTKAELLNSNIEFQ  72
            +I ++GLGYVGLP+AV+ ++  +++GFD N  RIK+LK+  D T EVT   L N+NIE+ 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   DRLSDKNKFKFIIVAVPTPVDKLKNPDLSFLVSASEVVGRHISKGGVAVFESTVYPGATE  132
                D +K  FII+AVPTP+DK ++PDL  L+ ASE VG+ I+ + + V+ESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EVCVPVIEKESGLRWKRDFWIGYSPERVNPGDREHNIERVVKIVSGDTPQTLELVASVYG  192
            E CVPV+EK SGL   +DF +GYSPER+NPGD+ H +E + K+VSG+T + LE+VA VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  KVIKAGVYKSPDIKTAEAAKVIENIQRDINIALMNELALIFHKLGLDTKEVLNAAKTKWN  252
             V+ AGV K++ IK AEAAKVIEN QRD+NIALMNELA+IF+KL++DT+EVL+A+ TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLPFEPGLVGGHCIPVDPYYLARKSVEVGHAPELILAGRGVNEFIPLYIAHEIVKILIKA  312
            FL F PGLVGGHCI VDPYYL++K+ EVGH PE+ILAGR +N+ ++ YIA +++K L+K 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GKKVKGSKILILGATFKENVPDLRNSKVMELSKELEDFGMQIYHYDPVVMKNDLNHEYRW  372
            G  V+G+ + +LG TFKEN PDLRN+KV+++  EL ++G+++   D    KN+ +  +  
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  NFIDDINHHSPYDCVVLAVKHEVFIKKFSLDFYSKIMKTPCILIDIKGAYDREEILRKGF  432
            ++I D ++    D V++AV H  ++   +   Y +++K   I++DIKG  + +E+     
Sbjct  364  DLI-DTKELKMVDVVLFAVPHKDYME--NKKDYINLVKDCGIVFDIKGIINSDELNVSQR  420

Query  433  LYWRL  437
            L WRL
Sbjct  421  L-WRL  424

352) vipA in NC_006834


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  342 bits (1284),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 204/420 (49%), Positives = 299/420 (72%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLRDGHDATLELDETELAAATQVRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ E  L   T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  73   AADAADLASCSIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            +++A DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEAASGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITSGSTPEAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T E  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A+S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSQSVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK+Q VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  QGIALAQARVLVLGATFKENCPDLRNSRALELVHLLQAAGVQVDTCDPWADPVEALQHSG  372
            QG+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VQLCEMPQDGAYDAVVLAVAHAQYRAYDAARIAALGKPGAVVYDVKS--AWPRVAVSDRL  430
            ++L +  +    D V++AV+H +Y   +      L K  ++V+D+K+      + VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

353) PXO_01511 in NC_010717


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  342 bits (1284),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 204/420 (49%), Positives = 299/420 (72%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLRDGHDATLELDETELAAATQVRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ E  L   T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  73   AADAADLASCSIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            +++A DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEAASGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITSGSTPEAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T E  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A+S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSQSVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK+Q VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  QGIALAQARVLVLGATFKENCPDLRNSRALELVHLLQAAGVQVDTCDPWADPVEALQHSG  372
            QG+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VQLCEMPQDGAYDAVVLAVAHAQYRAYDAARIAALGKPGAVVYDVKS--AWPRVAVSDRL  430
            ++L +  +    D V++AV+H +Y   +      L K  ++V+D+K+      + VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

354) XOC_2570 in NC_017267


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 204/420 (49%), Positives = 299/420 (72%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLRDGHDATLELDETELAAATQVRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ E  L   T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  73   AADAADLASCSIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            +++A DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEAASGLRFNHDFFCGYSPERVNPGDRQRRLRHIRKITSGSTPEAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T E  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A+S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSQSVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK+Q VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  RGIALAQARVLVLGATFKENCPDLRNSRALELVHLLQAAGVQVDTCDPWADPVEALQHSG  372
            +G+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VQLCETPQDGAYDAVVLAVAHAQYRAYDAARIAALGKPGAVVYDVKSTWPRA--AVSDRL  430
            ++L +T +    D V++AV+H +Y   +      L K  ++V+D+K+        VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

355) HBHAL_2424 in NC_017668


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/409 (52%), Positives = 300/409 (74%), Gaps = 6/409 (1%)

Query  23   AIGFSKEYKVIGYDINEARISSLNQFYDYTKEISEEQLREARIKFTSNEKDLGACNFIIV  82
            A+ F++  KVIG+DINE+RI  L++ YD T+E++E++L+++ I +TSN  DL   +FII+
Sbjct  18   AVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIII  77

Query  83   AVPTPISVNQEPDLTYLKQASTVLGKNLSPGTIVVYESTVFPGATEEVCLPILERESGLE  142
            AVPTPI  ++ PDL  L +AS  +GK ++P+TIVVYESTV+PGATEE C+P+LE+ SGL 
Sbjct  78   AVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLV  137

Query  143  AGSDFHVGYSPERINPGDKDHTFQTINKIVAAQDKETLDTIYSIYQRVITAEVYKAASIK  202
             G DF VGYSPERINPGDK HTF+TI K+V++Q  E L+ +  +Y  V+TA V KA+SIK
Sbjct  138  CGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIK  197

Query  203  VAEASKIIENTQRDINIAFMNEISIIFNKLGINTHEAIKAASTKWNFNPFYPGLVGGHCI  262
            VAEA+K+IENTQRD+NIA+MNE++IIF+KL+I+T+E +KA++TKWNF  F PGLVGGHCI
Sbjct  198  VAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCI  257

Query  263  GVDPYYLIHKSKSVGYTPKFIESAREINDYMPEYIVKTLLEQMTIHKKNLKDLTITVLGV  322
            GVDPYYL HK++ VG  P  I ++R IND M+ YI   ++ ++  +  ++++ T+ VLG+
Sbjct  258  GVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGL  317

Query  323  TFKQNLPDTRNSKALEIVEKLKDLDVNVQVCDPHVDHNH----FKDELKDLHQLEESDVL  378
            TFK+N PD RN+K ++I+E LK+ ++NV V D + D N+    F  +L D  +L   DV+
Sbjct  318  TFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVV  377

Query  379  ILAVPHKFFTSLPVSTFQRLLKDGKGIIMDIKGALTQNELGEDITLWNL  427
            ++AVPHK +       +  L+KD  GI+ DIKG +  +EL     LW L
Sbjct  378  LFAVPHKDYME-NKKDYINLVKDC-GIVFDIKGIINSDELNVSQRLWRL  424

356) XOO_2935 in NC_007705


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 204/420 (49%), Positives = 298/420 (71%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLRDGHDATLELDETELAAATQVRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ E  L   T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TNIEY  62

Query  73   AADAADLASCSIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            +++A DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEAASGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITSGSTPEAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T E  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A+S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSQSVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK+Q VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  QGIALAQARVLVLGATFKENCPDLRNSRALELVHLLQAAGVQVDTCDPWADPVEALQHSG  372
            QG+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VQLCEMPQDGAYDAVVLAVAHAQYRAYDAARIAALGKPGAVVYDVKSAWPRA--AVSDRL  430
            ++L +  +    D V++AV+H +Y   +      L K  ++V+D+K+        VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

357) SAR116_1952 in NC_014010


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  340 bits (1276),  Expect = 9e-95, Method: Compositional matrix adjust.
 Identities = 197/347 (57%), Positives = 271/347 (79%), Gaps = 9/347 (2%)

Query  10   KLAVIGLGYVGLPLAAEFAKYREVVGFDIDESRIAELKDCNDRTRELSAAELKATTGLRI  69
            ++AV+GLGYVGLP+A  F++ + V+GFDI+ESRI ELK+  DRT E++   LK  T +  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-NTNIEY  62

Query  70   TNDADDLKDCNCYIITVPTPVDAAKKPDMSTLLSASKLVGSLLKAGDIVIYESTVYPGAT  129
            T++A+DLK  +  II+VPTP+D  +KPD+  LL AS  VG ++ ++ IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  130  EDDCAPILAQQSGLFYAANAEDNNDDVFHLGYSPERINPGDKQHRVTDIVKVTSGSSPRI  189
            E++C P+L + SGL  + +        F +GYSPERINPGDK H    I KV SG +  +
Sbjct  123  EEECVPVLEKYSGLVCGKD--------FFVGYSPERINPGDKVHTFETITKVVSGQTLEV  174

Query  190  ADLIDDLYAGIITAGTYKAESIRVAEAAKVIENTQRDVNIALINELAVIFDKLDIDTEAV  249
             +++ D+Y++++TAG  KA SI+VAEAAKVIENTQRDVNIAL+NELA+IFDKLDIDT+ V
Sbjct  175  LEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEV  234

Query  250  LKAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKALQVGYNPEIILAGRRLNDGMSQHVAD  309
            LKA+GTKWNFL F+PGLVGGHCIGVDPYYLTHKA +VG +PE+ILAGRR+ND M++ +A 
Sbjct  235  LKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIAS  294

Query  310  RLVQAMQNKNINISDARVLVLGLTFKENCPDTRNSKVFDLVQHLADY  356
             +++ + ++ +++ +A V VLGLTFKENCPD RN+KV++++++L +Y
Sbjct  295  NVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEY  341

358) vipA in NC_003919


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  339 bits (1274),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 203/420 (49%), Positives = 300/420 (72%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTVGFDIDAQRVAQLRDGHDVTLELDDAELGAATHLRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L   T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  73   SANAADLAGCRIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            ++NA DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEATSGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITSGSTADAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T +  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A+S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSESVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  RGVALAQARVLVLGATFKENCPDLRNSRALELVQLLQAAGVQVDTCDPWADPAEALQHGG  372
            +G+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VRLSEMPEDGAYDAVVLAVAHAQYRDYDVERIAALGKPGAVVYDVKSVWPRA--AVSDRL  430
            + L +  E    D V++AV+H +Y +   + I  L K  ++V+D+K++       VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNVSQRL  421

359) XAC29_10640 in NC_020800


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  339 bits (1274),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 203/420 (49%), Positives = 300/420 (72%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTVGFDIDAQRVAQLRDGHDVTLELDDAELGAATHLRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L   T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  73   SANAADLAGCRIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            ++NA DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEATSGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITSGSTADAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T +  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A+S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSESVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  RGVALAQARVLVLGATFKENCPDLRNSRALELVQLLQAAGVQVDTCDPWADPAEALQHGG  372
            +G+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VRLSEMPEDGAYDAVVLAVAHAQYRDYDVERIAALGKPGAVVYDVKSVWPRA--AVSDRL  430
            + L +  E    D V++AV+H +Y +   + I  L K  ++V+D+K++       VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNVSQRL  421

360) wecC in NC_020815


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  339 bits (1274),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 203/420 (49%), Positives = 300/420 (72%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTVGFDIDAQRVAQLRDGHDVTLELDDAELGAATHLRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L   T++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  73   SANAADLAGCRIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            ++NA DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEATSGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITSGSTADAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T +  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A+S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSESVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  RGVALAQARVLVLGATFKENCPDLRNSRALELVQLLQAAGVQVDTCDPWADPAEALQHGG  372
            +G+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VRLSEMPEDGAYDAVVLAVAHAQYRDYDVERIAALGKPGAVVYDVKSVWPRA--AVSDRL  430
            + L +  E    D V++AV+H +Y +   + I  L K  ++V+D+K++       VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNVSQRL  421

361) DND132_1765 in NC_016803


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  339 bits (1272),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 240/428 (57%), Positives = 317/428 (75%), Gaps = 9/428 (2%)

Query  15   AIAVVGLGYVGLPLAVALGRHFRVLGvdvserrvdelrrridrTHEVDFATVGddvdltl  74
             IAVVGLGYVGLP+AV++G   +V+G D++E R+ EL+   DRT+EV    +  + ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKL-KNTNIEY  62

Query  75   tsdlsdlAKARLILVAVPTPIDEFRTPDLRPVRGASISVGKYLQPGSVVVYESTVYPGLT  134
            TS+  DL KA +I++AVPTPID    PDL P+  AS +VGK + P+++VVYESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  135  EEFCVPLLEAESGLKCGPDFCVGYSPERINPGDKVHRLETITKVVAGQDEPTGRLLQQVY  194
            EE CVP+LE  SGL CG DF VGYSPERINPGDKVH +ETITKVV+GQ      ++ +VY
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  195  GSVVKAGTHLAPNIRTAEAAKVIENTQRDLNIALMNELALIFETMGIDTLDVLEAAGTKW  254
            +SVV AG H A++I+ AEAAKVIENTQRD+NIALMNELA+IF+ ++IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  255  NFLPFRPGLVGGHCIGVDPYYLTFKAQALGLHPHVILAGREINDNMGKFIAEATIKKLIR  314
            NFL F+PGLVGGHCIGVDPYYLT KAQ +G HP+VILAGR INDNM+K+IA   IK L++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  315  SDCKIMGARVGVLGLTFKENVPDLRNTRVVDILAELADYGVEVLVNDAQADPEEAERELG  374
             +  + GA V VLGLTFKEN PDLRNT+V++I+ EL +YG++V VND +AD +EA + +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  375  VTLRPLDEFRDLDALILAVPHEAYRAIAVRELKGWFADPAR--ALVVDVKGFFDRAELAA  432
            + L    E++ +D +++AVPH  Y      E K  + +  +  ++V D+KG+++  EL  
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY-----MENKKDYINLVKDCGIVFDIKGIINSDELNV  417

Query  433  ESVACWRL  440
                 WRL
Sbjct  418  SQRL-WRL  424

362) FIC_00330 in NC_013062


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  338 bits (1270),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 200/354 (57%), Positives = 281/354 (80%), Gaps = 5/354 (1%)

Query  125  STDIADIAGANIYIITVPTPVDKNNRPVLTPLIKASETVGKVLKKGDIVIYESTVYPGAT  184
            +++  D+  A++ II+VPTP+DK+N+P L PL+KASETVGKV+  + IV+YESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  185  EEDCIPVVEKTSGLTYNVDFYAGYSPERINPGDKEHTVEKILKVTSGSTPEIGQIVNNIY  244
            EE+C+PV+EK SGL    DF+ GYSPERINPGDK HT E I KV SG T E+ +IV ++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  245  KAVITAGTHLAPAIKVAEAAKVIENSQRDINIAFVNELAKIFNLMNINTHDVLEAAGTKW  304
             +V+TAG H A++IKVAEAAKVIEN+QRD+NIA++NELA IF+ ++I+T++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  305  NFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSMGDYVASQVIKTMIK  364
            NFL FKPGLVGGHCIGVDPYYL++KAQE G HPE+ILAGRR+ND+M+ Y+AS+VIK ++K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  365  KGIKVNSAEILMLGITFKENCPDVRNTKIVDVIAALKDYSVNVTVYDPWANPAEVMHEYG  424
            +G+ V++A + +LG+TFKENCPD+RNTK++++I  LK+Y++NVTV D  A+  E    +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  425  LRCNTILDNDPKFDAIVL-GVAHEEFLTLDLS-LHLKPE-GIVYDVKGVLTESD  475
            L  + I  ++ K   +VL +V+H +++      ++L  + GIV+D+KG++   +
Sbjct  363  L--DLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDE  414


 Score = 57.4 bits (198),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  1   MNHKIAIIGLGYVGLPLARLFATKFPVVGFDINATRVAELNAGHDDTLEVSDELLQSA  58
           MN++IA++GLGYVGLP+A  F+ K  V+GFDIN +R+ EL+   D T EV+++ L+++
Sbjct  1   MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT  58

363) Thal_0299 in NC_013894


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  338 bits (1269),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 221/430 (52%), Positives = 323/430 (76%), Gaps = 14/430 (3%)

Query  13   SICVVGLGYVGLPLAVALSKHFRVFGYDKNTKRVEELKVGIDSTGEVEAEKLIGTNVQFS  72
            +I VVGLGYVGLP+AV++++  +V+G+D N  R+ ELK   D T EV  +KL  TN++++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  73   SDPSVISQSRFIIVAVPTPVDKLKNPDLSFIRSASALVGRYMRRGSVVVYESTVYPGATE  132
            S++  + ++ FII+AVPTP+DK ++PDL  +  AS  VG+ +  +++VVYESTVYPGATE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  133  EVCVPILERESGLVWKRDFFVGYSPERINPGDPHHSLEKVVKVVSADTPQTLQVVKGVYE  192
            E CVP+LE+ SGLV  +DFFVGYSPERINPGD  H++E + KVVS++T + L++V +VY 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  193  KVVKAGVYVAPDIKTAEAAKVIENIQRDinialinelaiiFHRLGLDTREVLKAASTKWN  252
             VV AGV  A+ IK AEAAKVIEN QRD+NIAL+NELAIIF++L++DT EVLKA++TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  253  FLKFEPGLVGGHCIPVDPYYLAHKSKEVGYIPELILAGRRVNEHIPVFVAHQVVKTLVRS  312
            FL+F PGLVGGHCI VDPYYL+HK++EVG  PE+ILAGRR+N++++ ++A +V+K L++ 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  313  GKKIKGARVLVLGVSFKENVPDVRNSKVYDLVKELADFEMETYIFDPIADREGLKEEYGL  372
            G  ++GA V VLG++FKEN PD+RN+KV +++ EL ++ ++  + D  AD++  K  +GL
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  373  ELVEDYTVGAPYHAVIFAVRHNIFKEIFS--LELLKTLCDKPPILVDIKGMWDKEE---A  427
            +L++   +    + V+FAV H+ + E     ++L+K  C+   I+ DIKG+ + +E   +
Sbjct  364  DLIDTKELKMV-DVVLFAVPHKDYMENKKDYINLVKD-CG---IVFDIKGIINSDELNVS  418

Query  428  QKLGFVYWRL  437
            Q+L    WRL
Sbjct  419  QRL----WRL  424

364) BRPE64_BCDS01780 in NC_021294


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  337 bits (1266),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 207/407 (51%), Positives = 294/407 (73%), Gaps = 1/407 (0%)

Query  1    MAFARRFDVVGFDVDRRRIDTLRSGEDWTGEIERDVLNASTLRYTDNASDLSECNFFVVA  60
            ++F+ +  V+GFD++  RI  L++  D+T E+  + L+ + + YT NA DL   +F+++A
Sbjct  19   VTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIA  78

Query  61   VPTPVDEKCTPDFSLLVSACKTIGPVLRPGSIVVFESTVHPGATEEICGPELEKASGLRA  120
            VPTP+D    PD+  L+ A  T+G V+ P++IVV+ESTV PGATEE C P LEK SGL  
Sbjct  79   VPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVC  138

Query  121  GIDFKLGYSPERINPGDREHPLEKIVKIVSGQDDESADIIADVYGKIIDAGVHRASSIKV  180
            G DF +GYSPERINPGD+ H +E I K+VSGQ  E  +I+ADVY+ ++ AGVH+ASSIKV
Sbjct  139  GKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKV  198

Query  181  AEAAKVLENTQRDINIALMNEMSKICDLVGISTSEVLKAAGTKWNFLRFSPGLVGGHCIG  240
            AEAAKV+ENTQRD+NIALMNE++ I D ++I T+EVLKA+GTKWNFL F PGLVGGHCIG
Sbjct  199  AEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIG  258

Query  241  VDPYYLTSKAQELGYQPEVILAGRRINDGMAAHVASKLVQMLARKHRLGRSTRVGILGMT  300
            VDPYYLT KAQE+G +PEVILAGRRIND MA  +AS++++ L ++    +++ V +LG+T
Sbjct  259  VDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLT  318

Query  301  FKEDVPDIRNSKVVDLYHALGDYGIEPIAFDPMADKSQMEHEYGITLADRSELSNLDVVI  360
            FKE+ PD+RN+KV+++ + L +YG++    D  ADK++    +G+ L D  EL  +DVV+
Sbjct  319  FKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVL  378

Query  361  LAVPHRVILKTFWNDLPLMIADGGMVCDLRSALDRSRLPSLIGYWAL  407
            +AVPH+  +    +D   ++ D G+V D+++ ++   L      W L
Sbjct  379  FAVPHKDYMEN-KKDYINLVKDCGIVFDIKGIINSDELNVSQRLWRL  424

365) XALc_1695 in NC_013722


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  336 bits (1262),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 191/410 (47%), Positives = 290/410 (71%), Gaps = 3/410 (0%)

Query  10   SPRIAVIGLGYVGLPLAVAFGARYDTLGYDIDAQRVAQLRAGYDQTLEMQPEELRAGVQV  69
            +  IAV+GLGYVGLP+AV+FG +   +G+DI+  R+ +L+  YD+T E+  + L+   ++
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NI  60

Query  70   HYSDDVAALRDRTVYIVTVPTPIDAQEQPDLQPLRQASQLLAGVLKRGDLVIYESTVYPG  129
            +Y+ +   L+     I++VPTPID +++PDL PL +AS+ ++ V+  + +V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  130  TTEEVCVPLLEQGSGLRCNVDFHCGYSPERVSPGDRQRRLTDIRKITSGSNPTAAAAVDA  189
            +TEE CVP+LE+ SGL C  DF  GYSPER++PGD+ + +  I K+ SG        V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  190  LYAEIITAGTWRAPSIRVAEAAKVVENIQRDVNIALVNELALIFDRLDIDTHDVLEAAGT  249
            +Y+ ++TAG  +A+SI+VAEAAKV+EN QRDVNIAL+NELA+IFD+LDIDT++VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  250  KWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARKVNNRVGAHVAARVQALL  309
            KWNFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ ++  +A+ V   L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  310  AGKGVPMVAAHVLVLGVTFKENCPDLRNSRALELVQTLAATGARVDACDPWADPQAARA-  368
              +G+ + +A V VLG+TFKENCPDLRN++ +++++ L   G  V   D  AD + A+  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  369  HGVDLLPAPVPGRYDAVVLAVAHDAYRGFAATQIRALGNSDLVVYDVKSV  418
             G+DL+ +      D V++AV+H  Y       I  + + + +V+D+K++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCG-IVFDIKGI  409

366) wbpO in NC_016077


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  335 bits (1259),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 185/385 (49%), Positives = 285/385 (75%), Gaps = 0/385 (0%)

Query  14   KSKLAVVGLGYVGLPLAVQFAKHYDVIGFDTNEKKVARYKAGVDVTGEAGDAALKETDCQ  73
            + ++AVVGLGYVGLP+AV F++   VIGFD NE ++   K   D T E  +  LK+T+ +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  74   FTAQEEALKDARFFVIAVPTPLNGDNTPDLTAVKEATALVARHLSRGSIVVYESTVYPGV  133
            +T++ E LK A F++IAVPTP++ +N PDL ++  A+  V++ ++ ++IVVYESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  134  TEDICRPILERESGFACGPDFKIGYSPERINPGDRQHRLFNIVKIVSGMDGETLDAVADV  193
            TE+ C P+LE+ SG+ CG DF +GYSPERINPGD+ H +  I K+VSG   E L+ VADV
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  194  YGSIIEAGIYRAPTIKVAEAAKLVENSQRDINIALVNEFAMVFSQMGIETKEVIKAMNTK  253
            Y+S++ AG+ +A++IKVAEAAK++EN+QRD+NIAL+NE+A++F +++I+T+EV+KA  TK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  254  WNALGFYPGLVGGHCIGIDPYYFVYQAETLGYHSQVVSAGRRINNGMSSFVVRQVLTRLL  313
            WN L F PGLVGGHCIG+DPYY+  +A+ +G H++V+ AGRRIN+ M+ ++  +V+  LL
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  314  QAKIDICRANLFLFGMTFKEDCPDVRNSRSYDVYEEFRKCGLSPKMVDPCADKEEVSRLY  373
            +  +++  A + ++G+TFKE+CPD+RN++  ++ EE++  GL+  + D  ADK+E  +++
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  374  GLELTPLEAVHDADCIVFLVQHEVF  398
            GL+L     +   D ++F V H  +
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDY  386

367) Mrad2831_1176 in NC_010505


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  334 bits (1255),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 216/425 (51%), Positives = 314/425 (74%), Gaps = 5/425 (1%)

Query  20   SVAIVGLGYVGLPLALAFGRGRATIGYERAADKVAAYRAGHDPAGEIDAEAFRAAAHLAI  79
            ++A+VGLGYVGLP+A++FG  +  IG++    ++   +   D + E+  + ++ + ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  80   TDDPTALGaadvivvtvptpvdaaQCPDFDLLIRASDLVGRHMRPGATVVFESTVYPGAT  139
            T ++  L  AD I+++VPTP+D  + PD+  L++AS+ VG+ + P++ VV+ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  140  EEVCIPVLERASGLRWKTDFFVGYSPERINPGDREHSLARVVKIVAGDTPETLERLKALY  199
            EE C+PVLE+ SGL    DFFVGYSPERINPGD+ H++  + K+V+G+T E LE +  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  200  GSIIEAGLHAASSIRVAEAAKVIENTQRDLNIALMNELSLIFDKLDLDTQEVLAAAGTKW  259
            +S++ AG+H ASSI+VAEAAKVIENTQRD+NIALMNEL++IFDKLD+DT+EVL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  260  NFLPFRPGLVGGHCIGVDPYYLTHKAAMIGYHPQVILAGRRINDSMAAHVARSTVKRIVR  319
            NFL F+PGLVGGHCIGVDPYYLTHKA  +G HP+VILAGRRIND+MA  +A + +K +++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  320  RG-GTGRARVIVLGLTFKENCADLRNSKVADLVRELEEFGCAVSVHDPragaaearaeyg  378
            +G     A V VLGLTFKENC+DLRN+KV +++ EL E+G  V+V+D  A+  EA+  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  379  iaLVDWADLPTEADAAVIAVPHRDYARLGPEAIAARVKPGGLIVDVKALFEKAPFARLGY  438
            + L+D  +L    D  ++AVPH+DY     + I   VK  G++ D+K++++   +  ++ 
Sbjct  363  LDLIDTKELKM-VDVVLFAVPHKDYMENKKDYINL-VKDCGIVFDIKGIINSDELN-VSQ  419

Query  439  EVWRL  443
             +WRL
Sbjct  420  RLWRL  424

368) PSE_3209 in NC_016642


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  333 bits (1249),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 210/429 (49%), Positives = 309/429 (73%), Gaps = 6/429 (1%)

Query  1    MEEIVSVVGLGYVGLPVACALAHAGIKTIGYDIDRHRVQELLEGKDRTSSVTKTALSSKN  60
            M+  ++VVGLGYVGLPVA ++++   K IG+DI+  R++EL +  DRT+ VT   L + N
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  61   LTLTYSAPDIRQARIHIVAVPTPINISKRPDLGPIKKASKIVGAFMKPNDIVVFESTVYP  120
            +  T +A D+++A + I+AVPTPI+  ++PDL P+ KAS  VG  + P+ IVV+ESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GATEEIAVPLLQRESGLRFPRDFQIGYSPERINPGDKKHTLTNLLKIVSASSDEALETLA  180
            GATEE  VP+L++ SGL   +DF +GYSPERINPGDK HT+  + K+VS+ + E LE +A
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  ELYGKIVKAGIYKASSIKVAEAAKVIENTQRDLNIALMNELSMLFHAMDIDTRDVLEGAS  240
            ++Y+ +V AG+ KASSIKVAEAAKVIENTQRD+NIALMNEL+++F+ +DIDT +VL +++
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFLPFHPGLVGGHCIGVDPYYLTDKAHQLGFSPQVILAGRGTNESMSRFIATEVIQG  300
            TKWNFL F PGLVGGHCIGVDPYYLT+KA+++G  P+VILAGR  N++M+++IA++VI+ 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  301  CVKLARPMP-PRIAVLGITYKADVPDTRNSKVIDLIRELERFGAHIFAVDPLADPQHTKD  359
             +K +  +  + + VLG+T+K + PD RN+KVI++I EL  +G ++   D  AD +++K 
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  360  NFDIELYEDSPPGDCDAVILAVPHHSFFENEEPWHVMERYLSAEKVFVADLHGLLEREKT  419
             F+++L +       D V++AVPH  + EN      + +      VF  D+ G+++ +  
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVK--DCGIVF--DIKGIINSDEL  415

Query  420  PEHVKLWRL  428
                +LWRL
Sbjct  416  NVSQRLWRL  424

369) Bache_2159 in NC_014933


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  332 bits (1246),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 214/418 (52%), Positives = 313/418 (75%), Gaps = 10/418 (2%)

Query  5    KICVIGLGYVGLPLARLFSTKYQTIGFDMDQKRVDYLMSGHDSTFEVSDELLQDAIYNHG  64
            +I V+GLGYVGLP+A  F+ K + IGFD+++ R+  L +  D T EV+++ L+++     
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT----N  59

Query  65   FICTTNMDKIRDCNFYVVAVPTPVDDNNRPDLRPLWGASETvgkvikkgdivvYESTVYP  124
            +  T+N + ++  +F ++AVPTP+D +N+PDL PL  ASETVGKVI  + IVVYESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  125  GVTEEECLPVVERVSGLKFNEDFFAGYSPERINPGDKFHTVEKIKKVTSGSTPEIADVVD  184
            G TEEEC+PV+E+ SGL    DFF GYSPERINPGDK HT E I KV SG T E+ ++V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  185  AVYNSVLVNGTHKAPNIKVAEASKIIENSQRDVNIAFMNELAKIFNAMGIDTNDVIEAAA  244
             VY+SV+  G HKA++IKVAEA+K+IEN+QRDVNIA+MNELA IF+ ++IDTN+V+ A++
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  245  SKWNFIKLKPGLVGGHCISVDPYYLIQKAQVYGVLPRVMFSARRLNDGMGDYVGNQAIKL  304
            +KWNF+++KPGLVGGHCI+VDPYYL +KAQ  G  P V++++RR+ND M+ Y++++ IK 
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  305  MNKKGVLVKDSKILILGFTFKENCPDVRNTKVIDIYHTLEEYTKNITVYDPWADADRVKY  364
            + K+G+ V+++ + +LG+TFKENCPD+RNTKVI+I + L EY  N+TV D  AD +  K 
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  365  EYGVNLSANSFDSLKGKFDAVVLAVAHKEFVSIDIRSFLK--DKNGVVYDVKGVLNRE  420
             +G++L       LK   D V++AV+HK+++  + + +++     G+V+D+KG++N +
Sbjct  360  FFGLDLIDTK--ELK-MVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSD  413

370) VFMJ11_0161 in NC_011184


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  329 bits (1235),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 201/394 (52%), Positives = 294/394 (75%), Gaps = 3/394 (0%)

Query  5    DSKIAIVGLGYVGLPLALEFGKKYQTIGYDLNERRISELKNNIDVTLECTTEEIKSSKNI  64
            + +IA+VGLGYVGLP+A+ FG+K + IG+D+NE RI ELKNN D T E T + +K++ NI
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NI  60

Query  65   TFSFDIKDIENCNVYIVTVPTPITEFNQPDLGPLISASRSLGGILKSGDIVIYESTVYPG  124
             ++ +  D+ + +  I++VPTPI   N+PDL PL+ AS ++G ++ ++ IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  ATEEVCVPELEKFSGLKYNKDFYAGYSPERINPGDKLHRVANIHKVTSGSTAEVANFVDT  184
            ATEE CVP LEK+SGL   KDF+ GYSPERINPGDK+H    I KV SG T EV ++V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYSSVITAGTHKTTSIKVAEASKLIENIQRDVNIALVNELHQIFGKLGINTRKVIDAAST  244
            +YSSV+TAG HK++SIKVAEA+K+IEN QRDVNIAL+NEL  IF+KL+I+T  V+ A++T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFMKLYPGLVGGHCISVDPYYMLHKSSSIGYIPDMIRTAREVNNGMSDYLASDFIEEL  304
            KWNF+++ PGLVGGHCI+VDPYY+ HK+  +G  P++I ++R +N+ M+ Y+AS+ I EL
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  VKKKIDFAQKKIVILGFAFKENCPDLRNTKVYNLYLKLTSLGLDVTIYDPLVDVEEAEHE  364
            +K+ ++     + +LG++FKENCPDLRNTKV ++   L   GL+VT+ D   D +EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YSVSVTNKID-NCFDIAFLAVSHDGIIESIEKEF  397
            +++ + +  + +  D+ ++AV+H + +E+  K++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYMEN-KKDY  393

371) Runsl_0776 in NC_015703


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 212/424 (50%), Positives = 317/424 (75%), Gaps = 4/424 (0%)

Query  16   EKQIAIIGLGYVGLPIALEFANYFRVIGFDINQQRIDMMKAGQDPSHEMDPSVFEGKDIY  75
            +++IA++GLGYVGLP+A+ F+N  +VIGFDIN+ RI  +K   D ++E+  + +   +I 
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  76   FTANPDDLQQAHFFIVAVPTPVDDYKVPDLKPLIGASHAIGKALKKGDYVIYESTVYPGC  135
            +T+N++DL++A+F+I+AVPTP+D  + PDL PL+ AS+++GK +  +  V+YESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  136  TEEDCLPILEAESGLTLGADFKIGYSPERINPGDKERTIDKILKIVSGSDAEALEEIALV  195
            TEE+C+P+LE  SGL  G DF +GYSPERINPGDK +T++ I K+VSG   E LE +A V
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  196  YGKIITAGIYKAPTIKVAEAAKVIENTQRDLNISLMNELAIIFDRMGIDTKDVIEAAGTK  255
            Y+ ++TAG+ KA++IKVAEAAKVIENTQRD+NI+LMNELAIIFD+++IDT++V+ A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  256  WNFIKLYPGLVGGHCIGVDPyyllykakklGYDPQVIHSGRRINDGMPAFIAKRLVQMLI  315
            WNF+++ PGLVGGHCIGVDPYYL  KA+ +G +P+VI +GRRIND M+ +IA  +++ L+
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  316  QKGKSPQNAKVLMMGITFKENVSDIRNSKVADLVKELMSFSINVHLVDPYASPNEVAHEY  375
            ++G   Q A V ++G+TFKEN +D+RN+KV +++ EL  +++NV + D  A  NE    +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  376  SLTLID-KPSTEYDAVIVSVGHDHYKALDIAYFKSIMTDKPILMDLKGMYKNTDETIT--  432
            +L LID K     D V+ +V H +Y      Y+ +++ D  I+ D+KG+ ++ +  ++  
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNVSQR  420

Query  433  YWRL  436
             WRL
Sbjct  421  LWRL  424

372) XCV2417 in NC_007508


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  329 bits (1235),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 202/420 (49%), Positives = 301/420 (72%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLRDGHdatlelddaelaaatQLRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L  + ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  73   SANAADLAACRIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            ++NA DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEAGSGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITSGSTADAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T +  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRARSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSESVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  RGVALAQARVLVLGATFKENCPDLRNSRALELVQLLQAGGVQVDTCDPWADPAEALQHGG  372
            +G+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VHLSQTPEEGAYDAVVLAVAHAQYRDYDVAQIAALGKPGAVVYDVKSVWPRA--AVSDRL  430
            ++L +T E    D V++AV+H +Y + +  +   L K  ++V+D+K++       VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

373) Coch_1202 in NC_013162


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 210/427 (50%), Positives = 309/427 (73%), Gaps = 14/427 (3%)

Query  5    KIGIIGLGYVGFPLACLFAKKYPTVGYDPYTARVESLNTGIDTTGEIGSEILKERLATHL  64
            +I+++GLGYVG+P+A  F++K   +G+D   +R+  L+   D T E+  + LK+   T++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN---TNI  60

Query  65   ICTANPNDAKDCNVYIVAVPTPIDLYQQPDLTALREASQTVGALLKKGDIVIYESTVYPG  124
              T+N++D K  +  I+AVPTPID  ++PDL +L  AS+TVG ++  + IV+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  VTEEVCVPILESVSGLAYNRDFFVGYSPERINPGDKHHTVETICKITSGSTPEVAQEIDT  184
             TEE CVP+LE  SGL   +DFFVGYSPERINPGDK HT ETI K+ SG T EV + +  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  185  LYNSVLRGGTYLAPSIKVAEAAKVIENAQRDVNIAFMNEIAKIFNILEIDTNAVIDAASS  244
            +Y+SV+ +G   A+SIKVAEAAKVIEN+QRDVNIA+MNE+A IF+ L+IDTN V+ A+++
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  245  KWNFLPFRPGLVGGHCIGVDPYYLIQKAKLHGVSPRLMMEARKTNDSMGGYIAYQIINRL  304
            KWNFL F+PGLVGGHCIGVDPYYL +KA+  G  P +++ +R+ ND+M+ YIA ++I+ L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  305  CLQGMPVKDSRILLLGFTFKENCPDTRNTKVVDIYRTLENFTNNITVYDPCADPKRALEE  364
              QG+ V+++ + +LG+TFKENCPD RNTKV++I   L ++  N+TV D  AD + A   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  365  YGIE-VATKSQNLPTHNDVVVLCVAHQEFLQMNIE--NYLKEDGIVYDVKG-----KLKV  416
            +G++ + TK  ++    DVV++ V+H+++++ + +  N +K+ GIV+D+KG      L+V
Sbjct  361  FGLDLIDTKELKMV---DVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELNV  417

Query  417  KKNVFRL  423
             + + RL
Sbjct  418  SQRLWRL  424

374) R2APBS1_3317 in NC_020541


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  329 bits (1235),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 203/418 (49%), Positives = 300/418 (72%), Gaps = 4/418 (0%)

Query  3    EPRIAIIGLGYVGLPLAVAFGRLLDTVGFDTSVGRVDELCRGRDHtletsaeelaaaDRL  62
            +  IA++GLGYVGLP+AV+FG     +GFD + +R+ EL +   +  +  +E+      +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKEL-KNNYDRTNEVTENKLKNTNI  60

Query  63   RFTTDVQDIAPCNVFIVTVPTPVDEANRPDMRPLESASASIGSVLKRGDVVIYESTVYPG  122
             +T++ +D+   + +I++VPTP+D  N+PD+ PL  AS ++G V+  + +V+YESTVYPG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  123  TTEEICVPVLERASGLRFNHDFTCGYSPERINPGDKLHRLPTIMKITSGSTAETADFVDA  182
            +TEE CVPVLE+ SGL    DF  GYSPERINPGDK+H + TI K+ SG T E  ++V  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  183  LYRRIITAGTHQASSIKVAEAAKVIENTQRDVNIALVNELAMIFNTMGIDTQDVLDAAGT  242
            +Y  ++TAG H+ASSIKVAEAAKVIENTQRDVNIAL+NELA+IF+ ++IDT++VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNFLPFKPGLVGGHCIGVDPYYLTHKATILGYNAELILTARRINSRMGLHVAHRVMRLM  302
            KWNFL FKPGLVGGHCIGVDPYYLTHKA  +G ++E+IL++RRIN  M+  +A  V++ +
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  ANKRIHVVDSRILVLGLTFKENCPDLRNTRVVEIVRELETAHARVDVYDPWADPAEAEEK  362
             ++ ++V ++ + VLGLTFKENCPDLRNT+V++I+ EL      V V D  AD  EA   
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  363  LGIRPIDAPAAGSYDAIVLAVAHQAFLDLGSEGIRRFGREHCAL-FDIKSLLPATTVD  419
            +G+  ID+      D +++AV+H+ +++    +   + ++ C++ FDIK+++ +  ++
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKD-CGIVFDIKGIINSDELN  416

375) XACM_2206 in NC_016010


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 201/420 (48%), Positives = 301/420 (72%), Gaps = 4/420 (0%)

Query  13   RIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLREGHdatlelddaelaaatQLRY  72
             IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L  + ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  73   SANAADLAACRIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTT  132
            ++NA DL    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEAGSGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITAGSTADAADAVDALY  192
            EE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ +G T +  + V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  TSIITAGTWRARSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAGTKW  252
            +S++TAG  +A S++VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLMHKSESVGYHPDLIHTARQVNNRVGRHVAERVCGMLAM  312
            NFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  RGVALAQARVLVLGATFKENCPDLRNSRALELVQLLQAGGVQVDTCDPWADPAEALQHGG  372
            +G+ +  A V VLG TFKENCPDLRN++ +++++ L+  G++V   D  AD  EA +  G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VHLSQTPEEGAYDAVVLAVAHAQYRDYDVAQIAALGKPGAVVYDVKSVWPRA--AVSNRL  430
            ++L +T E    D V++AV+H +Y + +  +   L K  ++V+D+K++       VS+RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

376) XCR_2370 in NC_017271


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  328 bits (1232),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 197/411 (48%), Positives = 296/411 (73%), Gaps = 2/411 (0%)

Query  10   LQARIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLQQGHdatlelddaelaaaGQ  69
            ++  IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L    +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TN  59

Query  70   LRYTADAAELAGCTIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYP  129
            + YT++A +L    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  130  GTTEEVCVPLLEAGSGLRFNHDFFCGYSPERVNPGDRQRRLRDIRKITSGSTPNAADAVD  189
            G+TEE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T +  + V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  190  ALYASIITAGTWRAGSIRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAG  249
             +Y+S++TAG  +A+SI+VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  250  TKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGRHVAERVCSL  309
            TKWNFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  310  LAAQGIAPPQARVLVLGATFKENCPDLRNSRALELVQLLQAAGAQVDTCDPWADPEDALR  369
            L  QG+    A V VLG TFKENCPDLRN++ +++++ L+  G +V   D  AD ++A +
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  370  HGGVQLCETPEEGAYDAVVLAVAHAQYRDYDAQRIAALGKPGAVFYDVKSV  420
              G++L +T E    D V++AV+H +Y + + +    L K  ++ +D+K++
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGI  409

377) SL003B_2228 in NC_015259


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  327 bits (1227),  Expect = 6e-91, Method: Compositional matrix adjust.
 Identities = 208/396 (53%), Positives = 289/396 (73%), Gaps = 3/396 (0%)

Query  14   RIAVVGLGYVGLPVACAFAAAGYRVTGFDIDAARLGELERGHDRTGSVPAEALRLPGLAL  73
             IAVVGLGYVGLPVA +F+    +V GFDI+ +R+ EL    DRT  V  + L+   +  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  74   TSVETALadadviivavPTPVDRAKRPDLTPFVAAARNAGRAMKPGAIVVFESTVYPGAT  133
            TS    L  AD II+AVPTP+D+ ++PDL P++ A+   G+ + P++IVV+ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  134  EEVAVPVLEAESGLRLNEGFFVGYSPERINPGDTTRGFSDITKIVSASTDAACDRLCALY  193
            EE  VPVLE  SGL    +FFVGYSPERINPGD  + F  ITK+VS+ T    + +  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  194  GSVVTAGIHRAPSIRVAEAAKVIENTQRDLNIALMNELSILFHAMGIDTRDVLAGAATKW  253
            +SVVTAG+H+A+SI+VAEAAKVIENTQRD+NIALMNEL+I+F+ ++IDT +VL +++TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  254  NFLPFQPGLVGGHCIGVDPYYLTHKAHEIGLTPQVILAGRGTNEAMPAFVAGKVIQACVR  313
            NFL F+PGLVGGHCIGVDPYYLTHKA+E+G  P+VILAGR  N+ M+ ++A++VI+  ++
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  314  LGRRMP-PKIAVLGVTYKANVPDIRNSKVVDLVRELAEFGAEVKVFDPLADARETRAEYG  372
             G  +  + + VLG+T+K N PD+RN+KV++++ EL E+G +V V D  AD  E++  +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  LDLSGENdlagadavvlavPHDAFLAGGDAW-PLVR  407
            LDL + ++L   D V++AVPH  ++        LV+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVK  398

378) xccb100_2391 in NC_010688


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  327 bits (1226),  Expect = 7e-91, Method: Compositional matrix adjust.
 Identities = 197/411 (48%), Positives = 296/411 (73%), Gaps = 2/411 (0%)

Query  10   LQAHIAVIGLGYVGLPLAVAFGERRDTLGFDIDAQRVAQLQQGHdatlelddaelaaaGQ  69
            ++ +IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L    +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TN  59

Query  70   LRYTADAAELAGCTIFIVTVPTPIDSFEQPDLEPLRSATVLIAAALKPGDLVIYESTVYP  129
            + YT++A +L    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  130  GTTEEVCVPLLEEASGLRFNADFFCGYSPERVNPGDRQRRLRDIRKITSGSTPHAADAVD  189
            G+TEE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T +  + V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  190  ALYASIITAGTWRAESIRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAG  249
             +Y+S++TAG  +A SI+VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  250  TKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGRHVAERVCSL  309
            TKWNFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  310  LAAQGIAPSQARVLVLGATFKENCPDLRNSRALELVQLLQVAGAQVDTCDPWADPEDALR  369
            L  QG+    A V VLG TFKENCPDLRN++ +++++ L+  G +V   D  AD ++A +
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  370  HGGVQLCETPEEGAYDAVVLAVAHAQYRDYDAQRIAALGKPGAVFYDVKSV  420
              G++L +T E    D V++AV+H +Y + + +    L K  ++ +D+K++
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGI  409

379) A1S_0052 in NC_009085


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  326 bits (1223),  Expect = 9e-91, Method: Compositional matrix adjust.
 Identities = 196/338 (58%), Positives = 263/338 (78%), Gaps = 6/338 (1%)

Query  1    MDQVNRPDLTPLKKASETVGQALKKGDIVVYESTVYPGATEEVCIPILEKVSGLKFNQDF  60
            +D+ N+PDL PL KASETVG+ +  + IVVYESTVYPGATEE C+P+LEK SGL   +DF
Sbjct  83   IDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDF  142

Query  61   FAGYSPERINPGDKVNTLTKIKKITSGSTPEVANTVDAVYASIITAGTHKASSIKVAEAA  120
            F GYSPERINPGDKV+T+  I K+ SG T EV + V  VY+S++TAG HKASSIKVAEAA
Sbjct  143  FVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAA  202

Query  121  KVIENTQRDLNIALVNELSVIFDRIGIDTLDVLEAAGSKWNFLPFRPGLVGGHCIGVDPY  180
            KVIENTQRD+NIAL+NEL++IFD+++IDT +VL A+G+KWNFL F+PGLVGGHCIGVDPY
Sbjct  203  KVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPY  262

Query  181  YLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIKLMLQNGIDVPRSKVGVLGVTFKEN  240
            YLTHKA+EVG HP+VILAGRRINDNMA+Y+A N IK +L++G++V  + V VLG+TFKEN
Sbjct  263  YLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKEN  322

Query  241  CPDIRNSKVADLIKELEFWGAQVVVADPWADAEEVKHEYGVELGTVNAQNPVDSLIVAVG  300
            CPD+RN+KV ++I EL   G +V V D  AD +E K  +G++L   +  + VD ++ AV 
Sbjct  323  CPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMVDVVLFAVP  382

Query  301  HSEFRSLSASELRSYVKAEK--PVLADVKSLFDRTQMS  336
            H ++      + + Y++  K   ++ D+K++++  +++
Sbjct  383  HKDYM----ENKKDYINLVKDCGIVFDIKGIINSDELN  416

380) HCBAA847_1126 in NC_020555


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  325 bits (1220),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 195/382 (52%), Positives = 281/382 (74%), Gaps = 1/382 (0%)

Query  8    NAHIAIIGLGYVGLPLSVAFSKIYPTIGFDINPQRIDELKSSFDSTQQVSKQELQNSPNL  67
            N +IA++GLGYVGLP++V+F++    IGFDIN  RI ELK+++D T++V+ + L+N+ N+
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NI  60

Query  68   SFTHNLSHIAHANIYIICVPTPITENKTPDLSALIHASELVGKILQKGNIVIYESTTYPT  127
             +T N  ++  A++ II VPTPI  ++ PDL +L+ ASE VGK++  + IV+YEST YP 
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  128  CTENECKNALEKSSNLTFNTDFHLGYSPERINPSDSSHTLTQIQKITSGSTKQVAHFIDS  187
             TE+EC   LEK S L    DF +GYSPERINP+D  HT+  I K+ SG T +V +++  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  188  LYSSIITAGTFCVSSIKTAEMTKIIENAQRDLNIAFINEMYMICDALQIDALEVLEAAKT  247
            +YSS++TAG    SSIK AE +K+IEN+QRD+NIA++NE+ +I D L+ID+ EVL A+ T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  248  KWNFLPFTPGLVGGHCISVDPYYLTHKLHSIGYHPQVISSGRLINDTMPHFIAQKIIKLL  307
            KWNFL F PGLVGGHCI+VDPYYLTHK + +G HP+VI +GR IND M+ +IA ++IK L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  308  IQNGIEILNAKVLILGITFKQNCPDIRNSKVPIVKKELESFGLKVDVYDPVANKQEVQKE  367
            +++G+E+  A V +LG+TFK+NCPD+RN+KV  +  EL  +GL+V V D  A+K+E +K 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  368  YQISLLDELPLAYFDCIFLAVA  389
            + + L+D   L   D +++AV+
Sbjct  361  FGLDLIDTKELKMVDVVLFAVP  382

381) HCN_0854 in NC_017761


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  325 bits (1220),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 195/382 (52%), Positives = 281/382 (74%), Gaps = 1/382 (0%)

Query  8    NAHIAIIGLGYVGLPLSVAFSKIYPTIGFDINPQRIDELKSSFDSTQQVSKQELQNSPNL  67
            N +IA++GLGYVGLP++V+F++    IGFDIN  RI ELK+++D T++V+ + L+N+ N+
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NI  60

Query  68   SFTHNLSHIAHANIYIICVPTPITENKTPDLSALIHASELVGKILQKGNIVIYESTTYPT  127
             +T N  ++  A++ II VPTPI  ++ PDL +L+ ASE VGK++  + IV+YEST YP 
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  128  CTENECKNALEKSSNLTFNTDFHLGYSPERINPSDSSHTLTQIQKITSGSTKQVAHFIDS  187
             TE+EC   LEK S L    DF +GYSPERINP+D  HT+  I K+ SG T +V +++  
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  188  LYSSIITAGTFCVSSIKTAEMTKIIENAQRDLNIAFINEMYMICDALQIDALEVLEAAKT  247
            +YSS++TAG    SSIK AE +K+IEN+QRD+NIA++NE+ +I D L+ID+ EVL A+ T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  248  KWNFLPFTPGLVGGHCISVDPYYLTHKLHSIGYHPQVISSGRLINDTMPHFIAQKIIKLL  307
            KWNFL F PGLVGGHCI+VDPYYLTHK + +G HP+VI +GR IND M+ +IA ++IK L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  308  IQNGIEILNAKVLILGITFKQNCPDIRNSKVPIVKKELESFGLKVDVYDPVANKQEVQKE  367
            +++G+E+  A V +LG+TFK+NCPD+RN+KV  +  EL  +GL+V V D  A+K+E +K 
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  368  YQISLLDELPLAYFDCIFLAVA  389
            + + L+D   L   D +++AV+
Sbjct  361  FGLDLIDTKELKMVDVVLFAVP  382

382) wbpO in NC_010943


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  322 bits (1208),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 188/412 (46%), Positives = 288/412 (70%), Gaps = 7/412 (1%)

Query  9    VTPRFAVIGLGYVGLPLAVAFGRHWPTLGFDIDAGRIAELRGGRDHTLEMEADELAEATH  68
            +   +AV+GLGYVGLP+AV+FG     +GFDI+ +RI EL+   D+T E+  + L + T+
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TN  59

Query  69   LQYGSDPSLLDACNVYIVTVPTPIDAYEQPDLEPLRSATRLIASHLRAGDLVIYESTVYP  128
            ++Y S++  L   +  I++VPTPID  ++PDL PL  A+  ++  + ++ +V+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  129  GTTEEVCVPLLEQGSGLGFNEDFYCGYSPERVSPGDRQRRLADIRKITSGSTPEVAAVID  188
            G+TEE CVP+LE+ SGL    DF+ GYSPER++PGD+ + +  I K+ SG T EV  ++ 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  189  GLYQRIIDAGTFPAPSMRVAEAAKVVENIQRDVNIALVNELALIFDRLGIDTQDVLDAAG  248
            ++Y  ++ AG   A+S++VAEAAKV+EN QRDVNIAL+NELA+IFD+L+IDT++VL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  249  SKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGEHVAARVLAM  308
            +KWNFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ ++  +A+ V+  
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  309  LAERGRAPAEARILVLGVTFKEDCPDLRNSRALELAQRLRDAGAQVEVSDPWVGPAALTG  368
            L  +G     A + VLG+TFKE+CPDLRN++ +++ + L++ G +V V+D  V +    +
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVND--VEADKNEA  357

Query  369  E---GLDWLAEPGAGRYDAVVLAVAHARFKAMDEDAIRALLAPGGLVYDVKS  417
                GLD +        D V++AV+H  +     D I  L+   G+V+D+K+
Sbjct  358  KKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKG  408

383) Selsp_0178 in NC_015437


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  322 bits (1206),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 193/427 (46%), Positives = 299/427 (71%), Gaps = 10/427 (2%)

Query  11   KIAVVGLGYVGLPLAVAFSRHFSVIGYDSDEEKIADCRAGKDPMgelaaeegaaeRIDFT  70
            +IAVVGLGYVGLP+AV+F+    VIG+D +E +I + +   D   E++ +      I++T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  71   ADAARLRMASFIVVAVPTPIKGDKTPNLKPLKKATRVIGRHLQPGSIVVYESTVYPGVTE  130
            ++A  L+ A FI++AVPTPI  ++ P+L PL KA+  +G+ + P++IVVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  131  DICCTILERESGMRRG-EFKIGYSPERINPGDKVHRLENIVKIVSGMDEETLETIAGVYG  189
            + C  +LE+ SG+  G +F +GYSPERINPGDKVH +E I K+VSG   E LE +A+VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  190  TVVET-LHRAPSIRVAEAAKVAENAQRDINIAFMNELALVFHRMDIDTSAVADAMDTKWN  248
            +VV + +H+A+SI+VAEAAKV EN+QRD+NIA+MNELA++F+++DIDT+ V  A +TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  249  ALGFRPGLVGGHCIGVDPYYFIYQAQNLGYYSPLISTGRRINDDMSGFVAHAVVRELVRA  308
             L F+PGLVGGHCIGVDPYY+  +AQ++G  + +I +GRRIND+M+ ++A  V++EL++ 
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  309  KIDLAKARVHLFGMAFKENCPDTRNSRAADVYRILQEYDLTLAAVDPEVDAAAFRVEYGF  368
             +++  A V+++G++FKENCPD RN++  ++   L+EY+L ++  D E D    +  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  369  SLESLHDVQEADALVFLVAHEAF--ARLSWEELRAMCRADGPHLLVDVKGMYSREEAERE  426
             L    +++  D ++F V+H  +   +    +L   C      ++ D+KG+ + +E +  
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDC-----GIVFDIKGIINSDELNVS  418

Query  427  GFCYWRL  433
                WRL
Sbjct  419  Q-RLWRL  424

384) BFO_2943 in NC_016610


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  321 bits (1204),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 207/415 (50%), Positives = 301/415 (73%), Gaps = 5/415 (1%)

Query  3    STKICVIGMGYVGLPLARLFSTQYPTIGFDVNPVRVEKIMSGHDDTLEVSDELLQAALKN  62
            + +I V+G+GYVGLP+A  F+ +   IGFD+N  R+  + +  D T EV+++ L+ +   
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---  58

Query  63   GFRCTTNPEDLRDYNFYIVAVPTPIDVYNRPNLKALIDASTTvgkvigkgdivvYESTVY  122
             +  T+N+EDL+  +F I+AVPTPID  N+P+L +L+ AS TVGKVI  + IVVYESTVY
Sbjct  59   NIEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVY  118

Query  123  PGVTEEECLPVVEQVSGMKLNIDFFAGYSPERINPGDKGHTVETIQKVTSGSTPEAAEQI  182
            PG TEEEC+PV+E+ SG+    DFF GYSPERINPGDK HT ETI KV SG T E  E +
Sbjct  119  PGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIV  178

Query  183  DTVYRSVLTEGTHKAPSIRVAEASKIIENAQRDVNIAFMNELAKIFNAMGIDTNDVIEAA  242
              VY SV+T G HKA+SI+VAEA+K+IEN+QRDVNIA+MNELA IF+ ++IDTN+V+ A+
Sbjct  179  ADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKAS  238

Query  243  STKWNFIRMHPGLVGGHCISVDPYYLIQKAQVYGVLPRIMTTARRLNDGMGAYIANQTVM  302
            +TKWNF+   PGLVGGHCI+VDPYYL +KAQ  G  P ++ ++RR+ND M+ YIA++ + 
Sbjct  239  GTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIK  298

Query  303  YMNKKGILVKDAKILIMGFAFKENCPDTRNTKVMDIYHTLQEYTSRITIYDPWVDPSDVR  362
             + K+G+ V++A + ++G++FKENCPD RNTKV++I + L+EY   +T+ D   D ++ +
Sbjct  299  ELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  363  EVYGVDVITEQPAGKYDAVILAVAHKVF--GAPDISGLLKTNAVVYDVKSVLPRE  415
              +G+D+I  +     D V++AV+HK +     D   L+K  ++V+D+K+++  +
Sbjct  359  KFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

385) Natoc_3880 in NC_019974


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  320 bits (1199),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 181/384 (48%), Positives = 284/384 (74%), Gaps = 2/384 (0%)

Query  35   TVCVVGLGYVGLPLAVGFAQADYEVVGFDVDSSKVETLRNGVDTTGDLSDEDVLDGDITY  94
             + VVGLGYVGLP+AV F++ +  V+GFD++ S++  L+N  D T +++++ + + +I Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  95   TTNASAIRDADYVLVTVPTPVE-DERPNLEFIESAAETVGKHLTRGTTVVLESTVYPGVT  153
            T+NA  ++ AD+++++VPTP++ +++P+L  +  A+ETVGK +T +T VV ESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  154  REEFAPAIEDASGLERGADFFVAYSPERATPGDGEHSLDSVVKVVGGESNDVLENVATLY  213
             EE  P +E  SGL  G DFFV+YSPER  PGD  H+++++ KVV+G++ +VLE VA +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  214  ESVVEAGVHRAPSIEVAEACKVVENIQRDVNIALMNELSMALEKMDIDTQDVLEAAGTKW  273
             SVV AGVH+A+SI VAEA KV+EN QRDVNIALMNEL++ ++K+DIDT++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  274  NFHDYQPGLVGGHCIPVDPYFFAHRARQAGADPELILTGRDVNEAMPDHIADLTIKALND  333
            NF +++PGLVGGHCI VDPY+++H+A++ G +PE+IL+GR +N+ M+  IA   IK L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  334  GHKTLCESRILVLGLAYKPNVGDIRSSKVANVIDRLQQFDIDVVGYDPHADGAAVERSFG  393
                +  + + VLGL++K N  D+R++KV ++I+ L++++++V   D +AD     + FG
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  394  IDVQESLSFAGFDGVILATPHAEF  417
            +D+ ++  +   D V++A PH ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY  386

386) HH1660 in NC_004917


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  320 bits (1202),  Expect = 6e-89, Method: Compositional matrix adjust.
 Identities = 193/386 (50%), Positives = 279/386 (73%), Gaps = 1/386 (0%)

Query  19   HIAVIGLGYVGLPLAVAFGKVYPTIGFDIDSKRIEELQTGIDNTQEVNKEDILQASQLYF  78
            +IAV+GLGYVGLP+AV+FG+    IGFDI+  RI EL+   D T+EV  E+ L+ +++ +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVT-ENKLKNTNIEY  62

Query  79   CDQLTHIASANIYIICVPTPIDKNKVPDLSPLLNASKLVGKVLQKGNLVIYESTTYPTCT  138
              +  ++  A++ II VPTPIDK++ PDL PLL+AS  VGKV+  + +V+YEST YP  T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  139  ETECKNMLESTSHLSLNKDFYLGYSPERINPSDSSHTLTQIRKITSGSTLEVAKFVDSLY  198
            E EC  +LE  S L   KDF++GYSPERINP+D  HT+  I K+ SG TLEV  +V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  199  ASIITAGTHCVSSIKTAEMVKIIENAQRDLNIAFVNEMCIICDYLDIDALEVLEAAKTKW  258
            +S++TAG H  SSIK AE  K+IEN+QRD+NIA++NE+ II D LDID+ EVL A+ TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  259  NFLPFSPGLVGGHCISIDPYYLTHKMNAIGYIPQVISSGRLINDMMPHFVAQKMIKLMIA  318
            NFL F PGLVGGHCI++DPYYLTHK + +G  P+VI +GR IND M+ ++A ++IK ++ 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  319  QHIEVLSSKILILGITFKQNCPDIRNSKVPLVKKELEDFGAQVSIYDPLANVKEVQKQYG  378
            Q +EV ++ + +LG+TFK+NCPD+RN+KV  +  EL ++G +V++ D  A+ +E +K +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  379  ITLLPSLPTEYFDAIFLAVAHDKFLS  404
            + L+ +      D +++AV+H  ++ 
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME  388

387) wbpO in NC_016041


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  319 bits (1195),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 185/382 (49%), Positives = 287/382 (76%), Gaps = 2/382 (0%)

Query  9    KIGVIGLGYVGLPLAVEFGKHFITVGFDTNQKRVQELNLGYDNTEELETDEIHLSDKLSI  68
            +I+V+GLGYVGLP+AV FG+    +GFD N+ R++EL+  YD T+E+  + +  + ++  
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLK-NTNIEY  62

Query  69   TSDINKIKACNIYIVTVPTPVDINKQPDLTPLINVSEMIAPHIANGNIIIYESTVYPGVT  128
            TS+ + +K  ++ I++VPTP+D +++PDL PL++ SE ++  I+ + I++YESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  129  EDICVPILEKISGLVFNKDFFAGYSPERINPGDKVKRLTNIIKVTSGSTPEVAELIDTLY  188
            E+ CVP+LEK SGLV  KDFF GYSPERINPGDKV  +  I KV SG T EV E++  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  189  QTIVIAGTHKAPSIKVAEASKVIENVQRDVNIALVNELHQVFNKLGINTKDVIDAAATKW  248
             ++V AG HKA+SIKVAEA+KVIEN QRDVNIAL+NEL  +F+KL+I+T++V+ A++TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  249  NFMKLMPGMVGGHCISVDPYYLLHKSENAGFIPDLMRTAREINNGMPNYFANDFLRKLIL  308
            NF+++ PG+VGGHCI+VDPYYL HK+++ G  P+++ ++R IN+ M++Y+A++ ++ L+ 
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  309  RKINPLNCKILLLGFTFKENCPDIRNTKVYELYIVLINMGLDVQIYDPWVNKEEVFQTFN  368
            + ++     + +LG+TFKENCPD+RNTKV ++   L + GL+V + D   +K+E  + F 
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  369  VEVLTELNPNQVFDVGFLAVAH  390
            ++ L + +  ++ DV ++AV+H
Sbjct  363  LD-LIDTKELKMVDVVLFAVPH  383

388) XC_2091 in NC_007086


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  317 bits (1190),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 196/411 (48%), Positives = 295/411 (72%), Gaps = 2/411 (0%)

Query  10   LQAHIAVIGLGYVGLPLAVAFGERRDTLGFDIDAQRVAQLQQGHdatlelddaelaaaGQ  69
            ++ +IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L    +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TN  59

Query  70   LRYTADAAELAGCTIFIVTVPTPIDSFEQPDLEPLRSATVLIAAALKPGDLVIYESTVYP  129
            + YT++A +L    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  130  GTTEEVCVPLLEEASGLRFNADFFCGYSPERVNPGDRQRRLRDIRKITSGSTPaaadavd  189
            G+TEE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T    + V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  190  alyaSIITAGTWRAGSIRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAG  249
             +Y+S++TAG  +A+SI+VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  250  TKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGRHVAERVCSL  309
            TKWNFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  310  LAAQGIAPPQARVLVLGATFKENCPDLRNSRALELVQLLQAAGAQVDTCDPWADPEDALR  369
            L  QG+    A V VLG TFKENCPDLRN++ +++++ L+  G +V   D  AD ++A +
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  370  HGGVQLCEMPEEGAYDAVVLAVAHAQYRDYDAQRIAALGKPGAVFYDVKSV  420
              G++L +  E    D V++AV+H +Y + + +    L K  ++ +D+K++
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGI  409

389) vipA in NC_003902


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  317 bits (1190),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 196/411 (48%), Positives = 295/411 (72%), Gaps = 2/411 (0%)

Query  10   LQAHIAVIGLGYVGLPLAVAFGERRDTLGFDIDAQRVAQLQQGHdatlelddaelaaaGQ  69
            ++ +IAV+GLGYVGLP+AV+FG+++  +GFDI+  R+ +L++  D T E+ +  L    +
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKN-TN  59

Query  70   LRYTADAAELAGCTIFIVTVPTPIDSFEQPDLEPLRSATVLIAAALKPGDLVIYESTVYP  129
            + YT++A +L    ++I++VPTPID  ++PDL PL  A+  ++  + P+ +V+YESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  130  GTTEEVCVPLLEEASGLRFNADFFCGYSPERVNPGDRQRRLRDIRKITSGSTPaaadavd  189
            G+TEE CVP+LE  SGL    DFF GYSPER+NPGD+ + +  I K+ SG T    + V 
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  190  alyaSIITAGTWRAGSIRVAEAAKVVENIQRDVNIALVNELALIFDKLGIDTLDVLEAAG  249
             +Y+S++TAG  +A+SI+VAEAAKV+EN QRDVNIAL+NELA+IFDKL+IDT +VL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  250  TKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGRHVAERVCSL  309
            TKWNFL F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ +++ +A  V   
Sbjct  240  TKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKE  299

Query  310  LAAQGIAPPQARVLVLGATFKENCPDLRNSRALELVQLLQAAGAQVDTCDPWADPEDALR  369
            L  QG+    A V VLG TFKENCPDLRN++ +++++ L+  G +V   D  AD ++A +
Sbjct  300  LLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKK  359

Query  370  HGGVQLCEMPEEGAYDAVVLAVAHAQYRDYDAQRIAALGKPGAVFYDVKSV  420
              G++L +  E    D V++AV+H +Y + + +    L K  ++ +D+K++
Sbjct  360  FFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGI  409

390) wbpO in NC_013949


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  317 bits (1187),  Expect = 8e-88, Method: Compositional matrix adjust.
 Identities = 201/422 (48%), Positives = 300/422 (72%), Gaps = 9/422 (2%)

Query  3    KIAIIGLGYVGLPLAIAFGRHYPTIGYDINETRIKELQENFDRNGQVEDFA-SSKKLSFC  61
            +IA++GLGYVGLP+A++FG     IG+DINE+RIKEL++N+DR  +V +    + ++ + 
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  62   KDRDSLKDCNIYIITVPTPIDAHKRPDISLLLGASRLVGEFLQKGDIVIYESTTYPTCTK  121
             + + LK  ++ II+VPTPID H++PD+  LL AS  VG  +  + IV+YEST YP  T 
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  122  KQCVPVLEDASGLVFNEDFFVGYSPERINPGDSLHTLENITKITSGSTKESAKKINTLYQ  181
             +CVPVLE  SGLV   DFFVGYSPERINPGD +HT+E ITK+ SG T E    +  +Y 
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  182  SIV-QDTYLAPSieiaeaakaienaQRDLNIAFVNELSLIFDKIGVDTQEVLNAAKTKWN  240
            S+V  +   A+SI +AEAAK IEN+QRD+NIA++NEL++IFDK+++DT+EVL+A+ TKWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  241  FLPFTPGLVGGHCISVDPYYLMHIAHEYGYHPKIITSGRLINDAIPSFIAQKTIKLLTQH  300
            FL F PGLVGGHCI+VDPYYL H A+E G HP +I +GR IND ++ +IA + IK L ++
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  301  KSNPLSAKIGIFGASFKENCKDIRNAKVFEVYKELKEYGVCVEIFDSLIDVKEAQSHYGI  360
              +  +A + ++G +FKENC D+RN+KV+++  ELKEYG+ V + D   D +EA+  +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  361  EVQKLDKLQGKYEALIIAIPHEEFLDF--DYAGHLAENGFIFDIKGVLKKK----TKNLY  414
            ++     L+   + +++A+PH ++++   DY   + + G++FDIKG+++      ++ L 
Sbjct  364  DLIDTKELK-MVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSDELNVSQRLW  422

Query  415  KL  416
            +L
Sbjct  423  RL  424

391) wbpO in NC_017671


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  317 bits (1187),  Expect = 8e-88, Method: Compositional matrix adjust.
 Identities = 185/407 (46%), Positives = 287/407 (71%), Gaps = 7/407 (1%)

Query  14   AVIGLGYVGLPLAVAFGRHWPTLGFDIDADRIAELRDGQDHTLEVEADELASARQLQYGS  73
            AV+GLGYVGLP+AV+FG     +GFDI+  RI EL++  D+T EV  + L ++ +++Y S
Sbjct  6    AVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEYTS  64

Query  74   DPALLDACNVYIVTVPTPIDAYEQPDLEPLRSATRLIASHLRAGDLVIYESTVYPGTTEE  133
            ++  L   +  I++VPTPID  ++PDL PL  A+  ++  + ++ +V+YESTVYPG+TEE
Sbjct  65   NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEE  124

Query  134  VCVPLLEEGSGLRFNEDFYCGYSPERVSPGDRQRRLADIRKITSGSTAEVAAVIDGLYQR  193
             CVP+LE  SGL    DF+ GYSPER++PGD+ + +  I K+ SG T EV  ++ ++Y  
Sbjct  125  ECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSS  184

Query  194  IIAAGTFPAPSMRVAEAAKVVENIQRDVNIALVNELALIFDRLGIDTQDVLDAAGSKWNF  253
            +++AG   A+S++VAEAAKV+EN QRDVNIAL+NELA+IFD+L+IDT++VL A+G+KWNF
Sbjct  185  VVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNF  244

Query  254  LPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGEHVASRVLAMLAERG  313
            L F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ ++  +AS V+  L  +G
Sbjct  245  LNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQG  304

Query  314  REPVQSRILVLGVTFKEDCPDLRNSRALELAQRLRDAGAQVEVSDPWVGPAALADE---G  370
             E   + + VLG+TFKE+CPDLRN++ +++ + L++ G +V V+D  V +         G
Sbjct  305  LEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVND--VEADKNEAKKFFG  362

Query  371  VQWLAEPVAGAYDAVVLAVAHARFKAMDEAGIRSLLAPGGLVYDVKS  417
            ++ +        D V++AV+H  +   +  +  +L+   G+V+D+K+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKG  408

392) Mpal_0929 in NC_011832


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  316 bits (1186),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 189/413 (46%), Positives = 292/413 (71%), Gaps = 17/413 (4%)

Query  8    DKTVCVVGLGYVGLPLAEDFSQHLRTIGFRRDQKKVDELNAT------------EGNRIE  55
            ++ + VVGLGYVGLP+A  F++  + IGF  ++ ++ EL+                  IE
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  56   ATTDPARIREADFVIIAVPTPVNKAKDPDLEPVESSAKTVGKNLKKGAIVVLESTVYPGV  115
             T+++  ++ ADF+IIAVPTP++K + PDL P+  ++ TVGK +  ++IVV ESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  116  TEGIMGPILERESGMVCGKDFAIGYSPERINPGDEEHVLARINKVVSGMDAPTLEALTEL  175
            TE    P+LE+ SG+VCGKDF +GYSPERINPGD  H +  I KVVSG     LE ++++
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  176  YG--LVTNVYPAPNIRTAEASKVIENVQRDLNIALMNELSMIFSRLDIDTEEVLKAAGTK  233
            Y+  + + V  A++I+ AEA+KVIEN QRD+NIALMNEL++IF +LDIDT+EVLKA+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  234  WNFHHYRPGMVGGHCIPVDPYYLVKRAKEVGYHAQVILAGRSINDSMPKYVADLAVKGLN  293
            WNF +++PG+VGGHCI VDPYYL  +A+EVG H++VILAGR IND+M+KY+A   +K L 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  294  KVGKTINGSKVLIMGLTYKEDVADIRESPVENMVHELKEFDVQVYGYDPLLSDTVIEHFG  353
            K G  ++G+ V ++GLT+KE+ +D+R++ V ++++ELKE++++V   D          F 
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  354  AIPLPNLDQ-KM-DAVIIAVAHQQFRQMPVETIRALMNDHPVLIDVRGMVDQE  404
            ++ L +  + KM D V++AV+H+++ +   + I  L++D  +++D++G+++ +
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSD  413

393) wecC in NC_009840


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  315 bits (1182),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 219/434 (51%), Positives = 319/434 (74%), Gaps = 22/434 (5%)

Query  8    NSNIAILGMGYVGLPLAVEFGKNKNINKSGLRKIIGFDIDESRINQLKLGFDKTGEISKD  67
            N NIA++G+GYVGLP+AV FG++        +K+IGFDI+ESRI++LK  +D+T E++ +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNK--------HKVIGFDINESRIKELKNNYDRTNEVTEN  53

Query  68   EIDQAKILNFNSNISSLLDIDIFIVTVPTPIDSLKNPNFSPLENACKMIGKILLERNLKL  127
             + +++I ++ SN   L   D++I++VPTPID  ++P++ PL +A   +GK++       
Sbjct  54   KLKNTNI-EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITP-----  107

Query  128  ERKDIQPIIVFESTVYPGATEEICVPIIESNSNLRFNSDFFVGYSPERINPGNSAYKLTN  187
                 + I+V+ESTVYPGATEE CVP++E  S L    DFFVGYSPERINPG+    +  
Sbjct  108  -----DTIVVYESTVYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFET  162

Query  188  IVKVTSGSTPYVAEKVDMLYRMIIKAGTYLAPSIKVAEAAKVIENTQRDlnialinelai  247
            I KV SG T  V E V  +Y  ++ AG   A+SIKVAEAAKVIENTQRD+NIAL+NELAI
Sbjct  163  ITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAI  222

Query  248  iFNKIGIDTHDVLKAASTKWNFINFRPGLVGGHCIGVDPYYLTYKAKELGYYPEVVLAGR  307
            IF+K++IDT++VLKA++TKWNF+NF+PGLVGGHCIGVDPYYLT KA+E+G  PEV+LAGR
Sbjct  223  IFDKLDIDTNEVLKASGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGR  282

Query  308  KINDSMANWIAKEIIAELYKRnlnlddkdvlvlGITFKENCPDIRNTKVIDLINELERYN  367
            +IND+MA+ IA ++I EL K+ L++++  V VLG+TFKENCPD+RNTKVI++I+EL  Y 
Sbjct  283  RINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYG  342

Query  368  FKIRVVDPIADINETYRSYKINIEKEIPLDKKFDIIISAVAHNAFIQEDINFWKNLIKKE  427
            +++ V D  AD NE+ + + +++     L K  D+++ AV+H+ ++++  ++  NL+ K+
Sbjct  343  LNVTVNDVEADKNEAKKFFGLDLIDTKEL-KMVDVVLFAVPHKDYMENKKDY-INLV-KD  399

Query  428  NSIFFDLNNLIPRD  441
             +I FD++ +I  D
Sbjct  400  CGIVFDIKGIINSD  413

394) BurJV3_1487 in NC_015947


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  314 bits (1179),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 183/407 (45%), Positives = 286/407 (71%), Gaps = 7/407 (1%)

Query  16   AVIGLGYVGLPLAVAFGRHWPTLGFDIDAQRIAELRDGQDHTLEMEADELASAQQLQYGS  75
            AV+GLGYVGLP+AV+FG     +GFDI+  RI EL++  D+T E+  + L +++ ++Y S
Sbjct  6    AVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTN-IEYTS  64

Query  76   DPALLDACNVYIVTVPTPIDAYEQPDLEPLRSATRLIASHLRAGDLVIYESTVYPGTTEE  135
            ++  L   +  I++VPTPID  ++PDL PL  A+  ++  + ++ +V+YESTVYPG+TEE
Sbjct  65   NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEE  124

Query  136  VCVPLLEEGSGLRFNEDFYCGYSPERVSPGDRQRRLADIRKITSGSTAEVAAVIDGLYQR  195
             CVP+LE  SGL    DF+ GYSPER++PGD+ + +  I K+ SG T EV  ++ ++Y  
Sbjct  125  ECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSS  184

Query  196  IIAAGTFPAPSMRVAEAAKVVENIQRDVNIALVNELALIFDRLGIDTQDVLDAAGSKWNF  255
            +++AG   A+S++VAEAAKV+EN QRDVNIAL+NELA+IFD+L+IDT++VL A+G+KWNF
Sbjct  185  VVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNF  244

Query  256  LPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGEHVASRVLAMLAERG  315
            L F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ ++  +AS V+  L  +G
Sbjct  245  LNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQG  304

Query  316  RVPAQSRILVLGVTFKEDCPDLRNSRALELAQRLRDAGAQVEVSDPWVGPAALADE---G  372
                 + + VLG+TFKE+CPDLRN++ +++ + L++ G +V V+D  V +         G
Sbjct  305  LEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVND--VEADKNEAKKFFG  362

Query  373  VQWLAEPVAGTYDAVVLAVAHARFKAMDEAGIRSLLAPGGLVYDVKS  419
            ++ +        D V++AV+H  +   +  +  +L+   G+V+D+K+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKG  408

395) Smal_1431 in NC_011071


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  313 bits (1173),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 182/407 (45%), Positives = 288/407 (71%), Gaps = 7/407 (1%)

Query  14   AVIGLGYVGLPLAVAFGRHWPTLGFDIDAGRIAELRKGVDHTLEMEADELVTAQLLEYGS  73
            AV+GLGYVGLP+AV+FG     +GFDI+ +RI EL++  D+T E+  + L  +++ EY S
Sbjct  6    AVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI-EYTS  64

Query  74   DPDLLDACNVYVVTVPTPIDAYEQPDLEPLRSATRLIASHLRAGDLVIYESTVYPGTTEE  133
            +++ L   +  +++VPTPID  ++PDL PL  A+  ++  + ++ +V+YESTVYPG+TEE
Sbjct  65   NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEE  124

Query  134  VCVPLLEQGSGLRFNEDFYCGYSPERVSPGDRQRRLADIRKITSGSTPGVAAVIDGLYQR  193
             CVP+LE+ SGL    DF+ GYSPER++PGD+ + +  I K+ SG T  V  ++ ++Y  
Sbjct  125  ECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSS  184

Query  194  IIAAGTFPAPSMRVAEAAKVVENIQRDVNIALVNELALIFDRLGIDTQDVLDAAGSKWNF  253
            +++AG   A+S++VAEAAKV+EN QRDVNIAL+NELA+IFD+L+IDT++VL A+G+KWNF
Sbjct  185  VVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNF  244

Query  254  LPFRPGLVGGHCIGVDPYYLLHKSESVGFHPDLIHTARQVNNRVGEHVATRVLAMLAERD  313
            L F+PGLVGGHCIGVDPYYL HK++ VG HP++I ++R++N+ ++  +A+ V+  L  ++
Sbjct  245  LNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQG  304

Query  314  RAPAQARILVLGVTFKEDCPDLRNSRALELAQRLRDAGAQVEVSDPWVGPAALAGE---G  370
                 A + VLG+TFKE+CPDLRN++ +++ + L++ G +V V+D  V +    +    G
Sbjct  305  LEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVND--VEADKNEAKKFFG  362

Query  371  VQWLAEPAAGCYDAVVLAVAHAHFKAMDEARIRSLLAPGGLVYDVKS  417
            ++ +        D V++AV+H ++       I +L+   G+V+D+K+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKG  408

396) XF1183 in NC_002488


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  313 bits (1174),  Expect = 9e-87, Method: Compositional matrix adjust.
 Identities = 194/420 (47%), Positives = 292/420 (70%), Gaps = 4/420 (0%)

Query  16   RIAVVGLGYVGLPLAVAFGRQRPTLGFDIDICRVQQLCAGHDITCEIELEELQAARHLRY  75
             IAVVGLGYVGLP+AV+FG ++  +GFDI+  R+++L    D T E+  + L+ + ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  76   SSDPRELSDCQIFIITVPTPIDVAEQPDLGPLRSASMLVASVLKPGDLVIYESTVYPGTT  135
            +S++ +L   +++II+VPTPID  ++PDL PL  AS  V+ V+ P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  136  EEVCVPLLEVGSGLCFNVDFHCGYSPERINPGDRKRRLQDICKIISGSTPDITAVVDALY  195
            EE CVP+LE  SGL    DF  GYSPERINPGD+ + ++ I K++SG T ++  +V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  196  SQIIVAGTWCAPSIRVAEAAKVVENIQRDVNIALVNELALIFNRLGIDTLDVLEAAETKW  255
            S ++ AG   A+SI+VAEAAKV+EN QRDVNIAL+NELA+IF++L+IDT +VL A+ TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  256  NFLPFRPGLVGGHCIGVDPYYLLHKSESVGYYPDLIHTARRVNSRVSWHVVDRVVALLGE  315
            NFL F+PGLVGGHCIGVDPYYL HK++ VG  P++I ++RR+N  ++  +   V+  L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  316  LSVPMTRAVVLVLGVTFKEDCPDLRNSRALDLVRMFRTLGAQVDVCDPCADPQQALEHEA  375
             ++ +  A V VLG+TFKE+CPDLRN++ ++++  ++  G +V V D  AD ++A    +
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  376  VTLCTEPKAGAYDAIVLAVAHAQYRMYDVATIAALGKPQAVVYDVKSVWPRA--AVTDRL  433
            + L         D +++AV+H +Y M +      L K  ++V+D+K++       V++RL
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY-MENKKDYINLVKDCGIVFDIKGIINSDELNVSQRL  421

397) NJ7G_3708 in NC_018224


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  312 bits (1171),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 181/384 (48%), Positives = 279/384 (73%), Gaps = 1/384 (0%)

Query  45   TICVVGLGYVGLPLAVGFARSNYRVIGYDVDDVTVSRLQEGIDTTGDLSDDAIQDGDISY  104
             I VVGLGYVGLP+AV F+  + +VIG+D+++  +  L++  D T +++++ +++ +I Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  105  TTDATEIGAADYVIIAVPTPIDDDDRPDLGYVESAATTVGSKMGPGTTVVLESTVYPGTT  164
            T++A ++  AD++IIAVPTPID +++PDL  +  A+ TVG  + P+T VV ESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  165  RETLVPALEDASGLTAGTDFFVGYSPERATPGDADHGLEDVVKVVSAQTETVLEDVATLY  224
             E  VP LE  SGL  G DFFVGYSPER  PGD  H +E + KVVS+QT  VLE VA +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  225  ESIVDAGVHRAPSIEVAEACKVVENAQRDLNIAFVNELTMALDTMDIDGRAVLEAAGTKW  284
             S+V AGVH+A+SI VAEA KV+EN+QRD+NIA++NEL++ +D +DID   VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  285  NFHEYRPGLVGGHCIPVDPYFFAYRSAQEGFDPELMQTGRRVNESVPDHVAELTIKALNQ  344
            NF +++PGLVGGHCI VDPY+++ ++ + G +PE++ +GRR+N++++  +A   IK L +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  345  CHKTLRESRVLVLGLAYKPDVGDIRSSKIGTVIDELQEYDIDVAGFDPFADDEAARESFG  404
                ++ + V VLGL++K +  D+R++K+  +I+EL+EY+++V+  D  AD + A+  FG
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  405  IEIQDRLSFEGFDAVVLATPHEEF  428
            +++ D   +   D V++A PH ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY  386

398) Fraau_2030 in NC_017033


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  311 bits (1167),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 194/403 (49%), Positives = 280/403 (70%), Gaps = 2/403 (0%)

Query  20   PLAVAFGRQLPTTGFDLNRDRVQALREGCDatlelsaealaaagqlqltaeleDLRACDT  79
            P+AV+FG +    GFD+N  R++ L++  D T E++ + L  +     +    DL+  D 
Sbjct  16   PVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAE-DLKKADF  74

Query  80   YIVTVPTPIDEAQRPDLQPLVSACRMLAPLLAAGDLVVFESTVYPGTTEEVCVPLLEAGS  139
             I++VPTPID  ++PDL PL+ A   ++ +++++ +VV+ESTVYPG+TEE CVP+LE  S
Sbjct  75   IIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYS  134

Query  140  GLRFNRDFFCGYSPERINPGEHARPVTAIVKLTSGSTPEAAARVDALYRRIITAGTHLAS  199
            GL   +DFF GYSPERINPG+  +   +I K+ SG T E    V  +Y  ++TAG H AS
Sbjct  135  GLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKAS  194

Query  200  SIRVAEAAKVIENIQRDVNIALVNELALIFHRLGIDTAEVLAAAGTKWNFLPFKPGLVGG  259
            SI+VAEAAKVIEN QRDVNIAL+NELA+IF++L+IDT EVL A+GTKWNFL FKPGLVGG
Sbjct  195  SIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVGG  254

Query  260  HCISVDPYYLTHKAEVIGYYPELILAARRINSRMGSYVADRLIRLMSERRLHIVDARILV  319
            HCI+VDPYYLTHKA+ +G  PE+ILA+RRIN  M+ Y+A  +I+ +  + L++ +A + V
Sbjct  255  HCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNV  314

Query  320  LGFAFKENCPDLRNTRVIDIIRELESSHARVDVHDPWVDAKAAGDEYRIHLVSQPPAGHY  379
            LG++FKENCPDLRNT+VI+II EL      V V+D   D + A   + ++L+        
Sbjct  315  LGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMV  374

Query  380  DAILLAVAHRQFIAWSPEQIRALGKPGAVVFDVKSVWPVEAVD  422
            D +L+AV+H++++    + I  L K  ++VFD+K++   + ++
Sbjct  375  DVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

399) Nmag_3288 in NC_013922


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 179/384 (47%), Positives = 286/384 (75%), Gaps = 1/384 (0%)

Query  30   TICVVGLGYVGLPLAVGFAQSDYQVIGYDVDESTVEQLKdgedttgdltdeAVQNDDISY  89
             I VVGLGYVGLP+AV F++ + +VIG+D++ES + +LK+  D T ++T++ ++N +I Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  90   TTNAGAISDAEYVVIAVPTPIQDDDRPDLSYVESAGQTVGSKMSAGTTVILESTVYPGST  149
            T+NA  +  A++++IAVPTPI+ +++PDL  +  A++TVG  ++++T V+ ESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  150  REVLIPALEETSGMTAGEDFFVGYSPERATPGDEEHGLSDVVKVVSGQTEAVLNDVADLY  209
             E  +P LE  SG+  G DFFVGYSPER  PGD  H +  + KVVSGQT  VL+ VAD+Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  210  GSVVDAGVHRAPSIEVAEASKVVENTQRDLNIAFVNELSVALEHMDVDTQDVLEAAGTKW  269
            +SVV AGVH+A+SI VAEA+KV+ENTQRD+NIA++NEL++ ++ +D+DT++VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  270  NFHDYRPGLVGGHCIPVDPYFLSYRSAQEGFEPELMQMGRKVNESMPAHVADLTIKALNK  329
            NF +++PGLVGGHCI VDPY+L+ ++ + G +PE++  GR++N++M+  +A   IK L K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  330  CHKTLRDSRVLVLGLSYKPGVGDLRSSKVSNVVDTLNEYDIHLEGFDPIANHEAARETFD  389
                ++++ V VLGL++K    DLR++KV ++++ L+EY++++   D  A+ + A+  F+
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  390  LEVQEQLSFEGFDAIVLATPHDEF  413
            L++ +   +   D +++A PH ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY  386

400) Saro_3150 in NC_007794


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  310 bits (1162),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 221/428 (52%), Positives = 302/428 (71%), Gaps = 18/428 (4%)

Query  25   RVTVLGLGYVGLPLAVALAKRFFVTGFDIDVERISELSEGHDRTREIEPALLSMSSLGLT  84
             ++V+GLGYVGLP+AV+++++  V GFDI+  RI EL +  DRT E+    L  +++  T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  85   CDAGVCPPSDFYIVTVPTPIDAANRPNLRLVEAASRTVGQMLPRAVAEGRQPIVVYESTV  144
             +A     +DF I++VPTPID  N+P+L  +  AS TVG+++        + IVVYESTV
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITP------DTIVVYESTV  117

Query  145  YPGVTEDICGPILEQVSGLRCGTDFFLGYSPERINPGDREHTIERITKVVSGQTPEVLDR  204
            YPG TE+ C P+LE+ SGL CG DFF+GYSPERINPGD+ HT+E ITKVVSGQT EVL+ 
Sbjct  118  YPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEI  177

Query  205  VADLYGAITSGGVFRaasikaaeaakvienaQRDINIAFMNEITQIFSRMDLSVWDVLAA  264
            VAD+Y+++ ++GV +A+SIK AEAAKVIEN+QRD+NIA+MNE++ IF ++D+   +VL A
Sbjct  178  VADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKA  237

Query  265  AGTKWNFLPFTPGLVGGHCIGVDPYYLSARAEALGHDPQVILAGRGVNDGMAKWVAGE--  322
            +GTKWNFL F PGLVGGHCIGVDPYYL+ +A+ +GH+P+VILAGR +ND MAK +A++  
Sbjct  238  SGTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVI  297

Query  323  ---LHARRGGKPGSVLVLGLTFKENVPDLRNSKVADVIAELKALGHAVDVHDPHADTaea  379
               L      + ++V VLGLTFKEN PDLRN+KV ++I ELK  G  V V+D +AD  EA
Sbjct  298  KELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEA  357

Query  380  lleyglelagdaFEQTYDLVFLAVPHKYYLAAGADRIAALVAPGGTLADLKGVLGEAA--  437
               +GL+L +    +  D+V++AVPHK Y+    D I  LV   G + D+KG++      
Sbjct  358  KKFFGLDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELN  416

Query  438  ----DWRL  441
                 WRL
Sbjct  417  VSQRLWRL  424

401) Psesu_1326 in NC_014924


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  309 bits (1158),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 188/407 (47%), Positives = 281/407 (70%), Gaps = 3/407 (0%)

Query  16   RVAVIGLGYVGLPLAVAFGARRRVLGFDVDAARVAELRAGHDRTRelaadalasagglel  75
             +AV+GLGYVGLP+AV+FG +++V+GFD++ +R+ EL+   DRT E++ + L ++     
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  76   gsdPAGLRSCAIFIVAVPTPIDSFREPDLEPLRQATRLVAAALKPGDLVIYESTVYPGTT  135
            ++ + +L+   ++I+AVPTPID    PDL PL +A+  V+  + P+ +V+YESTVYPG+T
Sbjct  64   SN-AEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  136  EEICVPILEEGSGLRFNVDFSCGYSPERVSPGDHHRRLADIRKITSGSHPAAARAVDALY  195
            EE CVP+LE  SGL    DF  GYSPER++PGD  + +  I K+ SG        V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  196  RSIITAGTWPAPSIRVAEAAKVVENIQRDVNIALVNELALVFDRLGIDTGDVLEAAGTKW  255
             S++TAG   A+SI+VAEAAKV+EN QRDVNIAL+NELA++FD+L+IDT +VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  256  NFLPFRPGLVGGHCIGVDPYYLLHRSRNAGFHPELIHTAREVNERVVGHVVGKVLSLLRE  315
            NFL F+PGLVGGHCIGVDPYYL H++++ G HPE+I ++R +N+ +   + ++V+  L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  316  RGREPAQSRVLVLGVTFKENCPDLRNSRALDLVRELAASGARVDAVDPWASPDESAA-LG  374
            +G E   + V VLG+TFKENCPDLRN++ ++++ EL   G  V   D  A  +E+   +G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  375  VPLQDEPEQGAYDAIVLAVVHGQFRDWDAGRIRALGRPGVVVYDVKS  421
            + L D  E    D +++AV H ++ +   + I  L +   +V+D+K+
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKG  408

402) SPO0556 in NC_003911


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  308 bits (1153),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 197/420 (47%), Positives = 289/420 (69%), Gaps = 10/420 (2%)

Query  19   RIAVLGLGYVglplalglaragFQTLGFDTDAAHITALGRGHDRNGEVSERSLAETRARF  78
             IAV+GLGYVGLP+A+ ++    + +GFD + ++I  L    DR  EV+E  L +T   +
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  79   SCDPADLAGCTVYIIGVPTPITDAKTPDLEPLKGACRMIAPHLVPGDMVIVESTVYPGVT  138
            + ++ DL      II+VPTPI   + PDL PL  A   ++  + P+ +V+ ESTVYPG T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  139  EEICGPVLAEGSGL----ELYSQIKLAYSPERVNPGDAEHSMENVVKIVSAQDAETLDRV  194
            EE C PVL   SGL    +++    ++YSPER+NPGD  H+ E + K+VS+Q  E L+ V
Sbjct  123  EEECVPVLEKYSGLVCGKDFF----VGYSPERINPGDKVHTFETITKVVSGQTLEVLEIV  178

Query  195  AAIYAPVVKAGVHRASSIRTAEAAKVIENTQRDLNIALVNEFSLIFSRLGLDTLEVLEAA  254
            A +Y++VV AGVH+ASSI+ AEAAKVIENTQRD+NIAL+NE+++IF +L++DT EVL A+
Sbjct  179  ADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKAS  238

Query  255  GTKWNFLPFKPGLVGGHCIGVDPYYLTYRAEQSGYHPEVILAGRRINDNMGRHVARQLIK  314
            GTKWNFL FKPGLVGGHCIGVDPYYLT +A++ G HPEVILAGRRINDNM++ +A ++IK
Sbjct  239  GTKWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIK  298

Query  315  ALIARRIDPGRARVLVMGFTFKENCADIRNTRVADILSELAEYSVATEVCDPWVDPEAME  374
             L+ + ++   A V V+G+TFKENC+D+RNT+V +I+ EL EY++   V D   D +   
Sbjct  299  ELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  375  QEYGVTPVSEPTTGAYDAIVVAVAHRQFVELGAAAIRAFGLPGAVLYDIKGIFSKSDTDL  434
            + +G+  +        D ++ AV+H++++E        +    ++++DIKGI++  + ++
Sbjct  359  KFFGLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVFDIKGIINSDELNV  417

403) Htur_1141 in NC_013743


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  304 bits (1138),  Expect = 7e-84, Method: Compositional matrix adjust.
 Identities = 177/384 (47%), Positives = 277/384 (73%), Gaps = 1/384 (0%)

Query  38   TICVVGLGYVGLPLAVGFAQSDYRVIGYDVDESTVDRLQSGVDTTGDLSDEAVQNDDISY  97
             I VVGLGYVGLP+AV F++ + +VIG+D++ES +  L++  D T +++++ ++N +I Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  98   TTDASQIGDADYVIIAVPTPIDEDDRPDLNYVESAATTVGSKMKPGTTVILESTVYPGTT  157
            T++A ++  AD++IIAVPTPID +++PDL  +  A+ TVG  + P+T V+ ESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  158  REVLVPALEDASDLTAGEGFFVGYSPERATPGDEEHGLADVVKVVGAQDEKVLEDVAALY  217
             E  VP LE  S+L  G +FFVGYSPER  PGD  H +  + KVV++Q   VLE VA +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  218  ESVVDAGVHRAPSIEVAEASKVVENTQRDLNIAFVNELSMALERMDVDTQAVLEAAGTKW  277
             SVV AGVH+A+SI VAEA+KV+ENTQRD+NIA++NEL++ ++++D+DT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  278  NFHDYRPGLVGGHCIPVDPYFLAHRSAREGFEPELVRTSRTVNESVPDHVAELTIKALNN  337
            NF +++PGLVGGHCI VDPY+L+H++   G +PE++ ++R +N++++  +A   IK L +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  338  CHKTLRDSRVLVLGLSYKSGVGDIRSSKVADVVERLAEYDIDIAGFDPFADDETVEDAFE  397
                ++++ V VLGL++K    D+R++KV +++E L EY+++++  D  AD +     F 
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  398  LDVQERLSFEGFDAVVVATPHAEF  421
            LD+ +   +   D V+ A PH ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY  386

404) Natpe_3027 in NC_019962


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  300 bits (1125),  Expect = 8e-83, Method: Compositional matrix adjust.
 Identities = 178/413 (44%), Positives = 287/413 (70%), Gaps = 4/413 (0%)

Query  43   TICVVGLGYVGLPLAVGFAQSDYRVIGYDVDDVTVGRLQEGVDTTGDLPDEAIQDGDISY  102
             I VVGLGYVGLP+AV F++ + +VIG+D+++  +  L++  D T ++ ++ +++ +I Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  103  TTDATSIAEADYVIIAVPTPIDDDERPDLGYVESAAATVGSKMEPGTTVVLESTVYPGTT  162
            T++A  +  AD++IIAVPTPID +++PDL  +  A+ TVG  + P+T VV ESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  163  REVLAPALEDASGLTAGTDFFVGYSPERATPGDDEHGLADVVKVVSAQNEKVLEDLATLY  222
             E   P LE  SGL  G DFFVGYSPER  PGD  H +  + KVVS+Q   VLE +A +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  223  ESVVDAGVHPAPSIEVAEACKVVENAQRDLNIAFVNELSMALDNMDIDSRAVLEAAGTKW  282
             SVV AGVH A+SI VAEA KV+EN+QRD+NIA++NEL++ +D++DID+  VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  283  NFHDYRPGLVGGHCIPVDPYFFAYRSAREGFDPELMQTSRQVNESVPDHVAELTIKALNQ  342
            NF +++PGLVGGHCI VDPY+++ ++   G +PE++ ++R++N++++  +A   IK L +
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  343  SHKTLRESRVLVLGLAYKAGVGDIRSSKIDAVIDALQEYDIDIAGYDPFADGDAARESFG  402
                ++ + V VLGL++K    D+R++K+  +I+ L+EY+++++  D  AD + A+  FG
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  403  IEVQERLAFEGFDAVVLATPHAEFEQLDLESVARKLTDDPALI-DVTGTVGED  454
            +++ +   +   D V++A PH ++ +   + +  +L  D +++ D+ G +  D
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMENKKDYI--NLVKDCGIVFDIKGIINSD  413

405) Swit_1201 in NC_009511


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  300 bits (1124),  Expect = 9e-83, Method: Compositional matrix adjust.
 Identities = 213/424 (51%), Positives = 298/424 (71%), Gaps = 10/424 (2%)

Query  9    RIAVIGLGYVGLPLAVALAKHFPTVGIDIDQGRVDELKRGHDRTNeltaealaastlalt  68
             IAV+GLGYVGLP+AV++++    +G+DI+++R+ ELK   DRTNE+T + L  + +  T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  69   taIGEaadadvvivtvptpvdHANRPDLGPVMSATRSVASVLKPGRGTIIVYESTVYPGV  128
            +   +   AD +I++VPTP+D  N+PDL P++ A+ +V+ V+ P+  TI+VYESTVYPG 
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPD--TIVVYESTVYPGA  121

Query  129  TEDLCGPELEKLSGLRRGTDFFLGYSPERINPGDREHTVDRITKVVAGENPEVLDKLCAI  188
            TE+ C P LEK SGL  G DFF+GYSPERINPGD+ HT + ITKVV+G+  EVL+ +  +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  189  YGAVTTGGTFRAASIKVAEAAKVIENAQRDINIAFVNEITQIFGKVGISIWDVLAAAGTK  248
            Y++V T+G  +A+SIKVAEAAKVIEN+QRD+NIA++NE++ IF+K++I   +VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  249  WNFLRFVPGLVGGHCIGVDPYYLSYLAQQLGHDPRVILAGRGTNDGMGAWIADQIHERI-  307
            WNFL F PGLVGGHCIGVDPYYL+  AQ++GH+P VILAGR  ND M+  IA ++   + 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  308  -----ASGSRVLMLGLTFKENVPDLRNSRVIDVVRRLEWLRHEVVIHDPLADPAEARHEY  362
                   G+ V +LGLTFKEN PDLRN++VI+++  L     +V ++D  AD  EA+  +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  363  GVDLAADALDGRYDVVIGAVSHGDYAALPADRLAALVKPDGLVADLKGMWGGLDLPGVRR  422
            G+DL         DVV+ AV+H DY     D    LVK  G+V D+KG+  + +L   +R
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKD-YINLVKDCGIVFDIKGIINSDELNVSQR  420

Query  423  -WTL  425
             W L
Sbjct  421  LWRL  424

406) vipA in NC_004556


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  297 bits (1113),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 192/408 (48%), Positives = 289/408 (71%), Gaps = 2/408 (0%)

Query  16   RIAVVGLGYVGLPLAVAFGRQRPTLGFDIDICRVQQLCAGHDITCEIELEELQAARHLRY  75
             IAVVGLGYVGLP+AV+FG ++  +GFDI+  R+++L    D T E+  + L+ + ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  76   SSDPRELSDCQIFIITVPTPIDVVEQPDLGPLRSASMLVASVLKPGDLVIYESTVYPGTT  135
            +S++ +L   +++II+VPTPID  ++PDL PL  AS  V+ V+ P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  136  EEVCVPLLEAGSGLRFNVDFHCGYSPERINPGDRKRRLQDICKIISGSTPDITAVVDALY  195
            EE CVP+LE  SGL    DF  GYSPERINPGD+ + ++ I K++SG T ++  +V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  196  SQIIVAGTWCAPSIRVAEAAKVVENIQRDVNIALVNELALIFDRLGIDTLDVLEAAETKW  255
            S ++ AG   A+SI+VAEAAKV+EN QRDVNIAL+NELA+IFD+L+IDT +VL A+ TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  256  NFLPFRPGLVGGHCIGVDPYYLLHKSESVGYYPDLIHTArrvnnrvsrhvvdrvvALLGE  315
            NFL F+PGLVGGHCIGVDPYYL HK++ VG  P++I ++RR+N+ +++ +   V+  L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  316  LSVPMTRAVVLVLGVTFKEDCPDLRNSRALDLVRMFRTLGAQVDVCDPCADPQQALEHEA  375
             ++ +  A V VLG+TFKE+CPDLRN++ ++++  ++  G +V V D  AD ++A    +
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  376  VTLCTEPKAGAYDAIVLAVAHAQYRMYDVATIAALGKSQAVVYDVKSV  423
            + L         D +++AV+H +Y M +      L K  ++V+D+K++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY-MENKKDYINLVKDCGIVFDIKGI  409

407) Xfasm12_0525 in NC_010513


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  297 bits (1112),  Expect = 8e-82, Method: Compositional matrix adjust.
 Identities = 192/408 (48%), Positives = 289/408 (71%), Gaps = 2/408 (0%)

Query  13   RIAVVGLGYVGLPLAVAFGRQRPTLGFDIDICRVQQLCAGHDITCEIELEELQAARHLRY  72
             IAVVGLGYVGLP+AV+FG ++  +GFDI+  R+++L    D T E+  + L+ + ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  73   SSDPRELSDCQIFIITVPTPIDVAEQPDLGPLRSASMLVASVLKPGDLVIYESTVYPGTT  132
            +S++ +L   +++II+VPTPID  ++PDL PL  AS  V+ V+ P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEAGSGLRFNVDFHCGYSPERINPGDRKRRLQDICKILSGSTPDITAVVDALY  192
            EE CVP+LE  SGL    DF  GYSPERINPGD+ + ++ I K++SG T ++  +V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  SQIIVAGTWCAPSIRVAEAAKVVENIQRDVNIALVNELALIFDRLGIDTLDVLEAAETKW  252
            S ++ AG   A+SI+VAEAAKV+EN QRDVNIAL+NELA+IFD+L+IDT +VL A+ TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLLHKSESVGYYPDLIHTArrvnsrvsrhvvdrvvALLGE  312
            NFL F+PGLVGGHCIGVDPYYL HK++ VG  P++I ++RR+N  +++ +   V+  L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  LSVPMTRAVVLVLGVTFKEDCPDLRNSRALDLVRMFRNLGAQVDVCDPCADPQQALEHEA  372
             ++ +  A V VLG+TFKE+CPDLRN++ ++++  +++ G +V V D  AD ++A    +
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VTLCTEPKAGAYDAIVLAVAHAQYRMYDVATIAALGKPQAVVYDVKSV  420
            + L         D +++AV+H +Y M +      L K  ++V+D+K++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY-MENKKDYINLVKDCGIVFDIKGI  409

408) XfasM23_0464 in NC_010577


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  297 bits (1112),  Expect = 8e-82, Method: Compositional matrix adjust.
 Identities = 192/408 (48%), Positives = 289/408 (71%), Gaps = 2/408 (0%)

Query  13   RIAVVGLGYVGLPLAVAFGRQRPTLGFDIDICRVQQLCAGHDITCEIELEELQAARHLRY  72
             IAVVGLGYVGLP+AV+FG ++  +GFDI+  R+++L    D T E+  + L+ + ++ Y
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNT-NIEY  62

Query  73   SSDPRELSDCQIFIITVPTPIDVVEQPDLGPLRSASMLVASVLKPGDLVIYESTVYPGTT  132
            +S++ +L   +++II+VPTPID  ++PDL PL  AS  V+ V+ P+ +V+YESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  133  EEVCVPLLEAGSGLRFNVDFHCGYSPERINPGDRKRRLQDICKIISGSTPDITAVVDALY  192
            EE CVP+LE  SGL    DF  GYSPERINPGD+ + ++ I K++SG T ++  +V  +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  193  SQIIVAGTWCAPSIRVAEAAKVVENIQRDVNIALVNELALIFDRLGIDTLDVLEAAETKW  252
            S ++ AG   A+SI+VAEAAKV+EN QRDVNIAL+NELA+IFD+L+IDT +VL A+ TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  253  NFLPFRPGLVGGHCIGVDPYYLLHKSESVGYYPDLIHTArrvnnrvsrhvvdrvvALLGE  312
            NFL F+PGLVGGHCIGVDPYYL HK++ VG  P++I ++RR+N+ +++ +   V+  L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  313  LSVPMTRAVVLVLGVTFKEDCPDLRNSRALDLVRMFRTLGAQVDVCDPCADPQQALEHEA  372
             ++ +  A V VLG+TFKE+CPDLRN++ ++++  ++  G +V V D  AD ++A    +
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  373  VTLCTEPKAGAYDAIVLAVAHAQYRMYDVATIAALGKSQAVVYDVKSV  420
            + L         D +++AV+H +Y M +      L K  ++V+D+K++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY-MENKKDYINLVKDCGIVFDIKGI  409

409) Natoc_2971 in NC_019974


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  296 bits (1109),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 168/384 (44%), Positives = 274/384 (72%), Gaps = 1/384 (0%)

Query  15   SVCVVGLGYVGLPLAAAFDAAGNDVTGFDVDPDKVDTLESGVDPTGDVGDSAIAEGDIEY  74
            ++ VVGLGYVGLP+A +F +  + V GFD++  ++  L +  D T +V ++ + + +IEY
Sbjct  4    NIAVVGLGYVGLPVAVTF-GNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  75   TTDSSAIANAEFVIVAVPTPVDDNEKPNLGIVEGAATSVGENMTEGTTVVLESTVYPGAT  134
            T+++  + +A+F+I+AVPTP+D ++KP+L  +  A+ +VG  +T +T VV ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  135  REVFVPALEEASGLTAGEEFGVGYSPERMVPGDTEHGLANVVKIVSALTDETRDDLAELY  194
             E  VP LE  SGL  G +F VGYSPER+ PGD  H +  + K+VS+ T E  + +A++Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  195  GTVVDAGLHEAPTIETAEAAKCVENTQRDVNIALMNELAMVCDELGVDTEAVLEAAGTKW  254
            ++VV AG+H A++I  AEAAK +ENTQRDVNIALMNELA++ D L++DT+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  255  NFHDYQPGLVGGHCIPVDPFYLLYQSERKGYDPELIRTSREVNESVPDHIAEMTIRALND  314
            NF +++PGLVGGHCI VDP+YL  +++  G +PE+I ++R +N++++  IA   I+ L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  315  SGKVLKDSRVLVAGLAYKPDVDDIRTSKIDNVIQELRSYGIEVVGFDPHAEPDATREMFD  374
             G  ++++ V V GL++K +  D+R +K+ ++I+EL+ YG++V   D +A+ + ++  F+
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  375  IDIQDAFDVTDFDGIVIGTPHSEF  398
            +D+ D+ ++   D ++++ PH ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY  386

410) Mpal_2131 in NC_011832


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  292 bits (1095),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 194/409 (48%), Positives = 283/409 (70%), Gaps = 16/409 (3%)

Query  8    DKTVCVVGLGYVGYPLAEAFSHHLKTIGFDIDARKI-------GIINETPGNKVQAT---  57
            ++ + VVGLGYVG P+A +F++  K IGFDI+  +I       +  NE   NK++ T   
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  58   --TDPSHIGEADIIIIAVPTPVTKAKDPDLMPVISAAETIGKHIKKGAIVVLESTVYPGV  115
              +++ ++  AD+IIIAVPTP+ K + PDL+P++ A+ET+GK I  ++IVV ESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  116  TEELMAPMIEKMSGFTCGKEFKIGYSPERINPGDEEHILPKITKIVSGMDEETLETLASL  175
            TEE   P++EK SG+ CGK+F +GYSPERINPGD  H +  ITK+VSG   E LE +A +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  176  YSLVTT--VYRAENIRTAEAAKVIENIQRDLNIALMNELSLIFQKMGLDTQAVLEAAGTK  233
            YS V T  V +A +I+ AEAAKVIEN QRD+NIALMNEL++IF+K+++DT+ VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  234  WNFHHYRPGLVGGHCIPVDPYYLVYKAEELGYHPQVILAGRAINDFMPKHVAELAIKGMN  293
            WNF +++PGLVGGHCI VDPYYL  KA+E+G HP+VILAGR IND M+K +A   IK + 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  294  DAGKVIRDSKVLILGLTYKENVPDTRESPSHEMIKELREFRADVYGYDPLLSEADINQFG  353
              G  ++++ V +LGLT+KEN PD R++   ++I EL+E+  +V   D      + ++F 
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  354  VKPLKDLNGFK-ADCIIINVPHDAFKSLTLEGVEKMSNGTPVVIDVKGM  401
               L D + +K  D +++ VPH  +     + ++ + ++  +V+D+KG+
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYMENKKDYIN-LVKDCGIVFDIKGI  409

411) capL in NC_013861


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  290 bits (1085),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 180/424 (43%), Positives = 298/424 (71%), Gaps = 3/424 (0%)

Query  8    KTFAVLGLGYVGLELAVSLAEKKETYGYDISKNRIEELQQNRDRNCIVSFEKLKNSELKL  67
            + +AV+GLGYVGL +AV++++K    G+DI+ +RI EL++N DR   V+ +KLKN+++  
Sbjct  3    RNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  68   TNDINLIKTANFYIVAVSTPAYFYELPNLEPLINATRSLGEVLKKGDIVVFESTVYPGTT  127
            T++ + +K A+F I+AV+TP    + P+L PL++A+ ++G V+  + IVV+ESTVYPG+T
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  128  EEVCIPILEETSHLRCGHDFNVGYSPERISPGDKEHHLQNIPKVISAQNEHTLQEIKEAY  187
            EE C+P+LE  S L CG DF VGYSPERI+PGDK H ++ I KV+S+Q  + L+ + + Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  188  H-LICDTVYPVSNIKTAEAVKILENTQRDINIAFMNEFAQIMHALGLDTHEIINGSKTKW  246
              ++   V   S+IK AEA K++ENTQRD+NIA+MNE+A I + L++DT+E++++S TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  247  SFIPFKPGFVGGHCIAIDPQYLAFKAKRHGVDPKIISIARQVNDGITQFIIHEMNKMLIK  306
            +F+ FKPG+VGGHCI++DP YL+ KA+  G +P +I  +R++ND ++++I  ++ K L+K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  307  KNISFQKIKIGFFGVTYKENVPDIRNSLAFKLIKEMKEYGFNYIAHDPWANKKVVKEKYH  366
            + +  Q   +  +G+T+KEN PD+RN+  + +I E+KEYG+N   +D  A+K+  K  + 
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  367  LDLKEFDEMEDISVAIIIVQHDFYREKGWQQFVNKLKPAGLIMDIPNLFVEEKKDLGNIT  426
            LDL +  E+  + V ++ V H  Y E+  ++++N +K  G++ DI  ++  +  ++++  
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDYMEN-KKDYINLVKDCGIVFDIKGIINSDELNVSQ-R  420

Query  427  YWNL  430
             W L
Sbjct  421  LWRL  424

412) Memar_0699 in NC_009051


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  283 bits (1058),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 188/417 (46%), Positives = 276/417 (67%), Gaps = 20/417 (4%)

Query  8    DTTVCVVGLGYVGYPLADAFSRHLKTIGYDLDATKI-------ARINAEPGNRVLAT---  57
            +  + VVGLGYVG P+A +F+   K IG+D++ ++I        R N    N++  T   
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  58   --TDPAAIREADVVIVAVPTPVTKAKDPDISYVVSAAGTVGQNLRDGAVVVLESTVYPGL  115
              +++  ++ AD +I+AVPTP+ K + PD+  ++ A+ TVG+ +  +++VV ESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  116  TEEVVVPTLERASGKTCGKDFFVGYSPERINPGDTDHTLEKITKIVAGMDKETTERLAAL  175
            TEE  VP LE+ SG  CGKDFFVGYSPERINPGD  HT+E ITK+V+G   E  E +A +
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  176  YG--LVTNVYVAQDIRTAEAAKVIENVQRDLNIALMNELSLIFRKMGLETKAVLDAAGTK  233
            Y+  + + V  A  I+ AEAAKVIEN QRD+NIALMNEL++IF K++++T+ VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  234  WNFHNYRPGLVGGHCIPVDPYYLVYKAEELGYHPQVILAGRAINDAMPKHVAEIAIKELN  293
            WNF N++PGLVGGHCI VDPYYL  KA+E+G HP+VILAGR IND M+K +A   IKEL 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  294  RAGKVIRDSNVLILGLTYKENVPDTRESPAGEMVRELKEFDVDVYGYDPLLAAAEIERFG  353
            + G  ++++ V +LGLT+KEN PD R++   +++ ELKE++++V   D      E  +F 
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  354  AKPVASLQGLSGPVDCIIVNSPHGVFVGLTLE--NVLAICNGKPIVVDVTGMLRRNN  408
            +  +   + L   VD ++   PH  ++    +  N++  C    IV D+ G++  ++
Sbjct  362  GLDLIDTKELK-MVDVVLFAVPHKDYMENKKDYINLVKDCG---IVFDIKGIINSDE  414

413) Halru_2869 in NC_019964


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  281 bits (1053),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 170/384 (45%), Positives = 263/384 (69%), Gaps = 1/384 (0%)

Query  17   SVCVVGLGYVGLPLAVALSEAGHELAGFDVDPETIETLDSGVDPTGDVGNERIDPTAIDF  76
            ++ VVGLGYVGLP+AV++++  H + GFD++   I  L +  D T +V ++++  T I++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  77   TTDPTPISDAEYVIVAVPTPIDDREKPDLALVESAGASVGDHLQRGATVVLESTVYPGAT  136
            T+++  +  A+++I+AVPTPID ++KPDL  +  A+ +VG  +  ++ VV ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  137  RERFVPSIERSSGLTAGVDFGVGYSPERMVPGDDEHGLANVVKIVSGMTEETLADVATLY  196
             E  VP +E+ SGL  G DF VGYSPER+ PGD  H +  + K+VSG T E L  VA +Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  197  ESVVEAGVHRAPTIETAEAAKVVENTQRDLNIALVNELAIACDHLGLETEAVLEAAGTKW  256
             SVV AGVH+A++I  AEAAKV+ENTQRD+NIAL+NELAI  D L+++T+ VL A+GTKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  257  NFHDYRPGLVGGHCIPVDPFYLIYETEQNGFSPELIRKAREVNEYVPEHVAELTIRGLNE  316
            NF +++PGLVGGHCI VDP+YL   +++ G  PE+I  +R +N+ ++  +A   I+ L  
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  317  AGNVLRDSRVLVCGLSYKPNVADIRTSAIGGTIDRLADYGIDVVGFDPHADADAMREEFS  376
             G  ++++ V V GL++K N +D+R + +   I+ L +YG++V   D +AD +  +  F+
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  377  IPVQETFDADGFDALLVGTPHGEF  400
            + + +T +    D +L + PH ++
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY  386

414) wecC in NC_017941


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  274 bits (1026),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 167/386 (44%), Positives = 271/386 (71%), Gaps = 1/386 (0%)

Query  32   TRNVCIVGLGYVGLPLAVGFDQAGHNVRGYDISKATISRLEEGEDPTKDLGDDTIQNSDI  91
             RN+ +VGLGYVGLP+AV F++  H+V G+DI+ + I  L +  D T+++ ++ ++N++I
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNI  60

Query  92   NFGTDPELITDAEYVIITVPTPVSDEKDPNLDYVKSAARTVGENLSPGSTVVLESTVFPG  151
            ++ +++E +  A+++II+VPTP+  ++ P+L  +  A+ TVG  ++P++ VV ESTV+PG
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  152  ATREVLAPVIEEASNYTLGDEFSVGYSPERLVPGDEKHSLENVVKIVSGCNKETLDDLVE  211
            AT E   PV+E  S    G +F VGYSPER+ PGD  H++E + K+VSG   E L+ + +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  212  LYSSVIDAGIHEAPSLEVAEAAKCIENIQRDINIALVNELAIACDYLGVDSNAVLEAAGT  271
            +YSSV+ AG+H A+S+ VAEAAK IEN QRD+NIAL+NELAI  D L++D+N VL A+GT
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  272  KWNFHDYRPGLVGGHCIPVDPFFFIYKAKKQGFNPNLIETAREVNEYIPEHVAKQTIKGL  331
            KWNF +++PGLVGGHCI VDP+++  KA+  G +P++I ++R +N+ ++  +A + IK L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  332  NLSGKVLQESKVLILGLTYKPNVEDIRTSAIGGTIKGLEEFGIEVTGHDPQADNDEVRCE  391
               G  +Q + V +LGLT+K N  D+R + +   I  L E+G++VT +D +AD++E +  
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  392  FEIAVQNELDFDNFDAVILGAAHDEY  417
            F + + +  ++   D V+++ +H +Y
Sbjct  361  FGLDLIDTKELKMVDVVLFAVPHKDY  386

415) HBZC1_15170 in NC_015674


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  271 bits (1013),  Expect = 5e-74, Method: Compositional matrix adjust.
 Identities = 176/414 (43%), Positives = 280/414 (68%), Gaps = 6/414 (1%)

Query  5    NPTLGILGLGFVGLPLALAFGQHFKTIGFDISSQRIAELQNGHDRNQQASQPDFLKARLL  64
            N  ++++GLG+VGLP+A++FG+  K IGFDI+  RI EL+N  DR ++ ++   LK   +
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENK-LKNTNI  60

Query  65   QITSCPQDLSGVDVFIIAVPTPVDLHNQPDLNMLKNASLLAGSHLQQQGIVIYESTTYPT  124
            + TS ++DL   D +IIAVPTP+D HN+PDL  L +AS   G  +  + IV+YEST YP 
Sbjct  61   EYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPG  120

Query  125  CTQEFCVPLLEQASHLRYNHDFFVGYSPERINVGD-ARPLSQIVKITSGSTPESARYIDQ  183
             T+E CVP+LE+ S L    DFFVGYSPERIN GD  + +  I K+ SG T E    + +
Sbjct  121  ATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVAD  180

Query  184  LYQRVICQT-HLVSSIEVAESAKILENTQRDLNIAFINDMAMLLDRLGVNLYEVLEACQT  242
            +Y  V+    H  SSI VAE+AK++ENTQRD+NIA++N++A+++D+L+++  EVL A  T
Sbjct  181  VYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGT  240

Query  243  KWNFVPFIPGLVGGHCISIDPYYLSFLARRVQHDPSLIEASRQINNAMPAFLANKIAKLL  302
            KWNF+ F PGLVGGHCI++DPYYL+  A+ V H+P +I A+R+IN+ M+ ++A+++ K L
Sbjct  241  KWNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKEL  300

Query  303  HTHQLSIQKARVLILGASFKENCNDLRNSQSLVLKQELESLGCGVDIYDPLIGFEDMQAL  362
              + L +Q A V +LG +FKENC DLRN++ + + +EL   G  V + D   + ++ + +
Sbjct  301  LKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKF  360

Query  363  FASTALQTLPQEPTYHAVILVVAHRCFAD--LDLSGVLLDQGFIYDLKAFLKRQ  414
            F+   ++T  +    + V++ V+H+ + +   D   ++ D G+++D+K++++ +
Sbjct  361  FGLDLIDT-KELKMVDVVLFAVPHKDYMENKKDYINLVKDCGIVFDIKGIINSD  413

416) capL in NC_017956


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  271 bits (1012),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 172/413 (42%), Positives = 277/413 (68%), Gaps = 8/413 (1%)

Query  40   AAAFALRGRRVIGYDLNAERVARIRAGIDETGEVARVDLQRALDCGLVPTADPDKLAEAR  99
            A +F+ + ++VIG+D+N  R+  ++   D T EV+   L+ +    +  T++++ L  A 
Sbjct  18   AVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNT---NIEYTSNAEDLKKAD  73

Query  100  IIMVCVPTPITRDRRPDLGPLLAACAILGPRLARGKVVIFESTVYPGVTEDVCGPALAEA  159
            +I++ VPTPI ++ +PDL PLL A   +G  ++ + +V++ESTVYPG TE+ C P L   
Sbjct  74   FIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKY  133

Query  160  SGLVVGQDILLGYSPERVNPGDKAHRVETMVKVVAGQGEAVTRALGQLYGELNGDQIHYA  219
            SGLV G+D+++GYSPER+NPGDK H  ET+ KVV+GQ   V   ++++Y+ +    +H A
Sbjct  134  SGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKA  193

Query  220  PSIQVAEAAKAIENAQRDINIAFVNEVALICERIGLSVHDVLDAARTKWNFLDFKPGLVG  279
            +SI+VAEAAK IEN+QRD+NIA++NE+A+I +++++  ++VL A+ TKWNFL+FKPGLVG
Sbjct  194  SSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNFLNFKPGLVG  253

Query  280  GHCIGVDPYYLSYLSQSIGHEPDVILAGRRLNDHMADEVADRIAFRFREVSQPVRRPSAL  339
            GHCIGVDPYYL+  +Q +GH+P+VILAGRR+ND+MA  +A  +   +   +  V+ ++  
Sbjct  254  GHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVN  313

Query  340  VLGAAFKEDVPDLRNSRTPQLVRRLCRHGFQVEVHDPWFDPKDLAR--AQDLTATAWPGK  397
            VLG +FKE+ PDLRN++  +++  L   G++V V+D   D ++  +  + DL  T    K
Sbjct  314  VLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTK-ELK  372

Query  398  AFDLVVIAVGHRAFLERSPEALLALVSPGGMIADPKGLYRNVRWSSPVNYWTL  450
              D+V++AV H+ ++E   +  + LV   G++ D KG+  +   + +   W L
Sbjct  373  MVDVVLFAVPHKDYMENKKD-YINLVKDCGIVFDIKGIINSDELNVSQRLWRL  424

417) PC1_2901 in NC_012917


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  269 bits (1005),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 175/419 (42%), Positives = 288/419 (69%), Gaps = 5/419 (1%)

Query  11   VAVIGLGYIGLPVACEFSKYFNVIAYDCNRIRVEQLSNNIDSTGTNSYGCRNEKNIKWTN  70
            +AV+GLGY+GLPVA  F++  +VI++D N  R+ +L NN D T   +    ++ NI  T+
Sbjct  5    IAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTS  64

Query  71   DEYDIEFADFFIVCVPTPVDINNKPDITCLIKATKTVGHYLRKNSIVVYESTVSPGTTEE  130
            +  D+  ADF+I+ VPTP+D +NKPD+  L+KA+ TVG  +  ++IVVYESTV PG+TEE
Sbjct  65   NAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEE  124

Query  131  VCQPLLEKYAQLKSGKDFFIGFSPERLCPGDDLHSLVNTDKIVSCAHENGLQKIFMVYNH  190
             C P+LEKY+ L  GKDFF+G+SPER+ PGD +H++    K+VS    + L+ +  VY+ 
Sbjct  125  ECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSS  184

Query  191  VYKKGIHKTSSIRSAEAAKILENIQRDVNIALINEVHEVFQKDNIDTYEVIRLASTKWNF  250
            V   G+HK+SSI+ AEAAK++EN QRDVNIAL+NE+  +F+K +IDT EV++ ++TKWNF
Sbjct  185  VVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWNF  244

Query  251  GKYFPGLVGGHCISVDPYYFIDYANKSGHPVPLVSVSRRINedkkdiiiekV--NLFIKN  308
             ++ PGLVGGHCI+VDPYY+ + A+  GH   ++  +RRIN++    I  +V  +L+ + 
Sbjct  245  LNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQG  304

Query  309  NKITNPKIAIFGVTYKENCTDTRNSKSLLIYQSLVNSGYEVHLNDIKLLNKSKCTTNYDI  368
              +  + + ++G+T+KENC D RN+K + I + L + G +V +ND+   +K+     +++
Sbjct  305  LEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVE-ADKNEAKKFFGL  363

Query  369  NLTSLEDISGCDILIICVAHDEYKRMILSDYKKIINNESLIIDMKNVINESLNLQLSEH  427
            +L    ++   D++++ V+H +Y      DY +++++ ++++D+K +IN   +L++S++
Sbjct  364  DLIDTKELKMVDVVLFAVPHKDYMENK-KDYINLVKDCGIVFDIKGIINSD-ELNVSQR  420

418) wecC in NC_017944


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 169/388 (44%), Positives = 269/388 (70%), Gaps = 2/388 (0%)

Query  1    MTETVCVVGLGYVGLPLAIEFDRVGKSVIGYDVDSEKVSELSSGTDPTGDVTDEGVAASD  60
            M   + VVGLGYVGLP+A+ F+   K VIG+D++  ++ EL +  D T +VT++ +  ++
Sbjct  1    MNRNIAVVGLGYVGLPVAVTFGNKHK-VIGFDINESRIKELKNNYDRTNEVTENKLKNTN  59

Query  61   VFFTTDPAQLSDADFVIVTVPTPVDSMENPDLQFVESAAETVGKYISPGTTVVLESTVYP  120
            + +T+++ +L  ADF+I++VPTP+D  ++PDL  +  A+ETVGK I+P+T VV ESTVYP
Sbjct  60   IEYTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYP  119

Query  121  GATESVLVPALESESGYTVGEDIFVGYSPERASPgdtgrgvrdvvkvvgANDERVRDELA  180
            GATE   VP LE  SG   G D+FVGYSPER +PGD  +    + KVV+++   V + +A
Sbjct  120  GATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVA  179

Query  181  ELYGSIVDAGIHRAPDIETAEASKVIENVQRDMNIALVNELAIACDHMGLTTEDVLEAAG  240
            ++Y+S+V AG+H+A+ I  AEA+KVIEN QRD+NIAL+NELAI  D +++ T++VL A+G
Sbjct  180  DVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASG  239

Query  241  TKWNFHDGYSPGFVGGHCIPVDPFYLTYRSKREGFSPKLVLQAREINEYVPVHAARKTVK  300
            TKWNF + + PG+VGGHCI VDP+YLT +++  G  P ++L +R IN+ ++   A + +K
Sbjct  240  TKWNFLN-FKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIK  298

Query  301  TINDSGRVLQDTRLLVLGLAYKPGVGDIRSSEVGTMIEKLDEFDIDCVGYDPHADPDASR  360
             +   G  +Q++ + VLGL++K    D+R++ V  +IE L E++++    D +AD + ++
Sbjct  299  ELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  361  EVFGIDVTETVDFEAYDGVVVATAHDEF  388
              FG+D+ +T ++   D V+ A +H ++
Sbjct  359  KFFGLDLIDTKELKMVDVVLFAVPHKDY  386

419) BMB171_C4869 in NC_014171


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  258 bits (964),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 166/384 (44%), Positives = 266/384 (70%), Gaps = 8/384 (2%)

Query  2    KVAVIGLGYVGISLAGYFSEKHHIIGFDVNKEKVEEYKAGIDRTEEIG-KRVNQLGIKFT  60
            ++AV+GLGYVG+++A  F++KH +IGFD+N  ++ E K   DRT+E+  +++++  I +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  61   TEIEDIQEADIILVTVPTPTVAGTIDASYVK--KASEMIAPYMKQGAIVVYESTVYPFFT  118
            ++ ED++ AD+I+++VPTP +     +  +   KASE ++  +  ++IVVYESTVYP  T
Sbjct  64   SNAEDLKKADFIIIAVPTP-IDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  119  REECIPILEKYSGKECGVDFSVGYSPERVNPGDKKNTIKNITKVVAGYDEETTYKLAEFY  178
             EEC+P+LEKYSG  CG DF VGYSPER+NPGDK +T+  ITKVV+G   E    +A+ Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  179  RSVIEQ-VYPVDTLEAAEACKVLENSQRDLNIALINQFAMLYP--EIDTSAVVKAMNTKW  235
             SV+   V    ++  AEA KV+EN+QRD+NIAL+N++A+++   +IDT+ V+KA  TKW
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKW  242

Query  236  NALGFTSGLVGGHCIAEDPQYLIHKTRSRGNKFTLLEEARYINEEVPRHIVVKTMELLNK  295
            N L F +GLVGGHCI+ DP YL HK++  G+   ++  +R IN+++++ I  + +  L K
Sbjct  243  NFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLK  302

Query  296  SGKALSASKILIKGITFKENCPDVRNSKTVTIVEALKKSGAEVIVVDPIVDNKDLKQYYG  355
             G  + ++ + + G+TFKENCPD+RN+K + I+E LK  G +V V D   D+++ K+++G
Sbjct  303  QGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFG  362

Query  356  FEALKEYD-DSVDAIIYAVAHEVF  378
            ++ +   +   VD +++AV+H  +
Sbjct  363  LDLIDTKELKMVDVVLFAVPHKDY  386

420) Alfi_0914 in NC_018011


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  252 bits (942),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 172/423 (41%), Positives = 280/423 (67%), Gaps = 18/423 (4%)

Query  15   SLAVIGLGYVGVPVALRFARCFDVVGYDMDARRIEKLREKYGAGCG---------SIRFT  65
            ++AV+GLGYVG+PVA+ F+    V+G+D++  RI  L+++Y+             +I +T
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYT  63

Query  66   SLEEELSRAAFYIVTVLTPVDERKNPDLTCLVEATRTVARYLKRGDYVVYESTVYPGCTE  125
            S  E+L +A F I++V TP+D +++PDL  L+ A+ TV++ +  +  VVYESTVYPG TE
Sbjct  64   SNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATE  123

Query  126  EVCVPLLEKGSGLKLGADFKVGYSPERINPNDSEHTFSNTAKIVSANDGQALDevarvya  185
            E CVP+LEK SGL  G DF VGYSPERINP D  HTF   +K+VS++  + L+ VA VY+
Sbjct  124  EECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYS  183

Query  186  evvaaDLCRASGIRVAEAAKMTENVQRSVNIALMNELQRLFSRMGIDMGEVIDMASSKWN  245
             VV+A++ +AS+I+VAEAAK+ EN QR VNIALMNEL  +F +++ID  EV+  +++KWN
Sbjct  184  SVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTKWN  243

Query  246  FVKYRPGLGGGHCIPVDPLYLVSAASKLGVEMPVTSSGCAVNDGMAAYVVRSLLGAM---  302
            F++++PGL GGHCI VDP YL   A  +G +  V  +G  +ND MA Y+  +++  +   
Sbjct  244  FLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQ  303

Query  303  GSDGRGARALLMGVTYKENIDDIRNSRIAEMVGLLEREGMSVDVTDPHADPDKVYAMYGI  362
            G + +GA   ++G+T+KEN  D+RN+++ +++  L   G++V V D +AD +     +G+
Sbjct  304  GLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGL  363

Query  363  RPVPA--LRPPYDLIVVAVAHDEYRGLDDAYFRSISRGAALLGDIRGLYKGRIKSLG--Y  418
              + +  L+   D+++ AV+H +Y      Y+ ++ ++ +++ DI+G+ ++   +++   
Sbjct  364  DLIDTKELKMV-DVVLFAVPHKDYMENKKDYI-NLVKDCGIVFDIKGIINSDELNVSQRL  421

Query  419  WSL  421
            W L
Sbjct  422  WRL  424

421) Metfor_1144 in NC_019943


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  246 bits (919),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 173/415 (42%), Positives = 266/415 (65%), Gaps = 20/415 (4%)

Query  8    NKTVCIVGLGYVGLPLAEAFSRHVRTMGYDIDERKVKGLQKT-------------APGIN  54
            N+ + +VGLGYVGLP+A +F+   + +G+DI+E ++K L++                 I+
Sbjct  2    NRNIAVVGLGYVGLPVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIE  61

Query  55   ATSDPARIRDADFIMICVPTLLTPENDPDLSYIRGAAKTVGANLKKGAVVILESTVYPGV  114
             TS++  ++ ADFI+I VPT +  +N PDL  +  A+ TVG  +  +++V+ ESTVYPG 
Sbjct  62   YTSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGA  121

Query  115  TEEVLLPVLEDASGFAAGKDFAVGYSPERINPGDDEHALSRTTKIVAGMDPATTSRMAGI  174
            TEE  +PVLE  SG+  GKDF VGYSPERINPGD  H++   TK+V+G        +A++
Sbjct  122  TEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADV  181

Query  175  YG--LITKVYCAPDIRTAEAAKVVENIQRDINIALTNEFSQMFPKLGLNTKNVLEAAGTK  232
            Y+  + + V  A+ I+ AEAAKV+EN QRD+NIAL NE++ +F KL+++T++VL A+GTK
Sbjct  182  YSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK  241

Query  233  WNFHHYTPGIVGGHCIPTVPHFLAYAARRQGFHPRMILAGRATNDQMIPFIADLVTGNLA  292
            WNF ++ PG+VGGHCI   P +L+  A+  G HP +ILAGR  ND+M  +IA  V  +L 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  293  AVKKGTAGPAVAVLGLTYKENVPDYRDNPVFDLIGVLTERGIRVFGYDPLLTKDEITR-L  351
                   G++V VLGLT+KEN PD R+  V+++I  L E G+ V   D    K+E  + +
Sbjct  302  KQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFF  361

Query  352  GVTPLDDIGQQMDGYIL-AAPHNQFIAMADREFAA-VAGPGILFVDIKGVFHRNA  404
            G+  +D    +M + +L A PH++++    +++   V + GI+F DIKG+++ + 
Sbjct  362  GLDLIDTKELKMVDVVLFAVPHKDYME-NKKDYINLVKDCGIVF-DIKGIINSDE  414

422) Metbo_0866 in NC_015216


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  222 bits (825),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 153/343 (45%), Positives = 231/343 (68%), Gaps = 11/343 (3%)

Query  15   IAIVGLGYVGLPTAIFFAENGFKVIGVEKDEVKLTKIKKGISTIGELNLDMRLSKVVNEK  74
            IA+VGLGYVGLP A+ F+++  KVIG + +E ++  +K+      E+  + +L +   E 
Sbjct  5    IAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVT-ENKLKNTNIEY  62

Query  75   KLIGTADLKWATEQSDIIISIVPTPVDEFKDPDLTPIKSSGEQIAKGLAEGKLVILESTV  134
                + DLK    ++D+II  VPTP+D  + PDL P+  ++E ++K ++ + +V+ ESTV
Sbjct  63   T-SNAEDLK----KADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTV  117

Query  135  YPGVTEE-CLQPILEQ-SGLKAGTDFGLAYCPERYNPGDVDHGIEKVSRVVGGITPEWAE  192
            YPG TEE C+ P+LE+ SGL  G DF ++Y PER NPGD  H +E +++VV+G T E  E
Sbjct  118  YPGATEEECV-PVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLE  176

Query  193  VTRELYKIIINEDVKVLNNIKTTEAAKVIENTQRDLNIALMNELAMIFERLDIDVMDVIE  252
            +  ++Y  ++  +V   ++IK +EAAKVIENTQRD+NIALMNELA+IF++LDID  +V+ 
Sbjct  177  IVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLK  236

Query  253  GASTKWNFNVYYPGAGVGGHCLPVDPYYLVKKAKELGYHSKVIAAGRSINDNMPLHVMNL  312
            +++TKWNF  + PG  VGGHC+ VDPYYL  KA+E+G H+ VI AGR INDNM+  + + 
Sbjct  237  ASGTKWNFLNFKPGL-VGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASN  295

Query  313  VQDALNEQEKSIKNSKIVVLGFSYKENVGDPRESPAKTLTKNL  355
            V   L  Q   ++ + + VLG+++KEN  D R++    +  +L
Sbjct  296  VIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEEL  338

423) Htur_2168 in NC_013743


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  218 bits (812),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 148/367 (41%), Positives = 238/367 (65%), Gaps = 7/367 (1%)

Query  3    QIGIIGLGYVGLPLATAFADAGHPVVGYDIKRQKIERLRAKPPMVTGVGPADRAEGVPEF  62
            +I+++GLGYVGLP+A +F++  H V+G+DI+  +I  L+ +      V      +   E+
Sbjct  4    NIAVVGLGYVGLPVAVTFGNK-HKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEY  62

Query  63   TSNPERLRDCDVIITAVPTPLTETSEPDLSNVRSAGRTIGEQLRPGTTVVLESTVYPGAT  122
            TSN+E L+  D II AVPTP+   + PDL  +  A+ T+G  + P+T VV ESTVYPGAT
Sbjct  63   TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGAT  122

Query  123  REEFVPEIERASGLSLGDDFAVGYSPERLVPGEE-RSLRNSVKPVSGHTDAVRSELMDLY  181
             EE VP +E+ SGL  G DF VGYSPER+ PG+  +++    K VSG+T  V   + D+Y
Sbjct  123  EEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVY  182

Query  182  ESVVDE-LYPAPSIESAEAAKCLENAQRDLNIALINEFAMACNGVDSLDYEDVLSVADSK  240
             SVV   +  A+SI  AEAAK +EN+QRD+NIAL+NE+A+  + +D +D ++VL  +++K
Sbjct  183  SSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLD-IDTNEVLKASGTK  241

Query  241  WNFVRYSPGLVEGHCIPIDPYFLIERLERLGRSASLMREARAVNESVVDFIVGLVEDALS  300
            WNF+ + PGLV GHCI +DPY+L ++ + +G+ + ++  +R +N+++  +I + V   L 
Sbjct  242  WNFLNFKPGLVGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELL  301

Query  301  ERDEHIDGTDENRLLACGLAYKPNAEDLRSEAKRRLFDELRDRGLEPIGYDPHVDAADAT  360
             ++ +++G+  N L   GL++K N  DLR+    ++++EL++ GL+    D + D  +A 
Sbjct  302  KQGLEVQGATVNVL---GLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAK  358

Query  361  AAFDLPM  367
              F+L +
Sbjct  359  KFFGLDL  365

424) PH0429 in NC_000961


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  210 bits (781),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 163/385 (43%), Positives = 247/385 (65%), Gaps = 6/385 (1%)

Query  31   PLAVAFSKKFNVIGYDINTKKIDSLKKRKSYIEDVRDDEINLNRLQPTNDPEDLKKCDFI  90
            P+AV+F++K +VIG+DIN  +I  LK+     ++V ++ ++   ++ T+++EDLKK DFI
Sbjct  16   PVAVTFGNKHKVIGFDINESRIKELKNNYDRTNEVTENKLKNTNIEYTSNAEDLKKADFI  75

Query  91   IITVPTPLREDKTPDLSYVKDAARTVGRILRRGQFVILESTTYPGTTEEVLIPILEEESG  150
            II+VPTP+  ++ PDL  +  A+ TVG+++  + +V+ EST YPG+TEE  +P+LE  SG
Sbjct  76   IIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSG  135

Query  151  LKVIEDFGVAYSPERIDPGNKRYKIENTPKVVGGLTPEFTELASMLYGSVIEKIVP-VKD  209
            L    DF V+YSPERI+PG+K   +E   KVV+G T E  E+ + +Y+SV+   V     
Sbjct  136  LVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASS  195

Query  210  CKTAEAVKMLENVFRNVNIALVNELALIFEKMGIDIWEVIEAAKTKPYGFMAFYPGPGVG  269
             K AEA K++EN  R+VNIAL+NELA+IF+K++ID  EV+ A+ TK   F+ F PG  VG
Sbjct  196  IKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK-WNFLNFKPGL-VG  253

Query  270  GHCIPVDPYYLSYRAKQFGIIPRFIETAGEINNYMPVHTVNLAETGLRKIGRKIRGAKVA  329
            GHCI VDPYYL+ +A++ G  P  I ++  IN+ M+    +     L K G  ++GA V 
Sbjct  254  GHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVN  313

Query  330  VLGLAYKADISDTRESPAIKIIEELIERGAQVKVYDPYV-KSVRTKFGTFRVTETLEDIL  388
            VLGL++K + +D R++  I IIEEL E G +V V D    K+   KF  + + +T E  L
Sbjct  314  VLGLTFKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKE--L  371

Query  389  KWSDCVIFVTDHSLFKEKMEEILKI  413
            K  D V+F   H  + E+  + +++
Sbjct  372  KMVDVVLFAVPHKDYMENKKDYINL  396

425) Mtc_1451 in NC_017034


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  204 bits (758),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 154/366 (43%), Positives = 243/366 (67%), Gaps = 12/366 (3%)

Query  18   KICIVGLGYVGLPTAVFFAEKGFRVIGCDIKESFVELVNSGNSPLEDLELGDRIAKAVSS  77
            +I +VGLGYVGLP AV F++K  +VIG DI+ES +  +++     +++   +++ +  ++
Sbjct  4    NIAVVGLGYVGLPVAVTFGNKH-KVIGFDINESRIKELKNNYDRTNEVT-ENKLKN--TN  59

Query  78   GAFFATTNTREAVEKNDIILIIVPTPTGDGFEPDLSYIISAGESVAKGLHRGHLVILEST  137
              +   T+  E + K D+I+I VPTP +    PDL  ++ A+E+V+K +  + +V+ EST
Sbjct  60   IEY---TSNAEDLKKADFIIIAVPTPIDKHNKPDLLPLLKASETVGKVITPDTIVVYEST  116

Query  138  VYPGVTEEVLKPILEK-SGLKAGVDFGLAYCPERYNPGDEEHTIDKVTRVLGSTDKQWAE  196
            VYPG TEE   P+LEK SGL  G DF ++Y PER NPGD  HT++ +T+V+++   +  E
Sbjct  117  VYPGATEEECVPVLEKYSGLVCGKDFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLE  176

Query  197  TAAELYRCI--TNVYPVANIKTAEMAKIIENAQRDLNIALMNEIALICERMGLDVMEVIK  254
              A++Y  +  + V   ++IK AE AK+IEN+QRD+NIALMNE+A+I +++++D  EV+K
Sbjct  177  IVADVYSSVVTAGVHKASSIKVAEAAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLK  236

Query  255  AAATKWNFHVYYPGAGVGGHCLPKDPWYLVKAAEKHGYHAEVITAGRRINDYMPRHMFEL  314
            A++TKWNF  + PG  VGGHC+  DP YL   A+  G H+EVI AGRRIND M++ +   
Sbjct  237  ASGTKWNFLNFKPGL-VGGHCIGVDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASN  295

Query  315  LVKAMNRAGKPIKGSKIVVLGLSYKENIGDIRNSPSGILIKEVKEMGGIVYSVDQYIDEK  374
            ++K + + G  ++G+ + VLGL++KEN  D+RN+    +I E+KE G  V +V++   +K
Sbjct  296  VIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYGLNV-TVNDVEADK  354

Query  375  TAAHEF  380
              A  F
Sbjct  355  NEAKKF  360

426) Hbut_1420 in NC_008818


> U10927|32|G32|506708|AAA64651.1|Staphylococcus_aureus_M|+|23014..24288|cap1L|-|type 
1 capsule synthesis gene
Length=424

 Score =  166 bits (615),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 151/371 (41%), Positives = 225/371 (61%), Gaps = 14/371 (3%)

Query  43   RVIGYDIDQGRVEAIRRGRSYINYIPDHEVA-RVVKEGLLEAYTSPEPLHEADFILVTVP  101
            +VIG+DI+++R+  ++      NY   +EV+   +K+  +E  +++E L  ADFI+++VP
Sbjct  26   KVIGFDINESRIKELKN-----NYDRTNEVTENKLKNTNIEYTSNAEDLKKADFIIIAVP  80

Query  102  TPLRCNGLPDLSYVRSAArsvgrvlrrgqvvvlESSTYPGTTREVLAPILEEESGLRVVR  161
            TP+  +  PDL  +  A+ +VG+V+  + +VV ES+ YPG+T E   P+LE  SGL   +
Sbjct  81   TPIDKHNKPDLLPLLKASETVGKVITPDTIVVYESTVYPGATEEECVPVLEKYSGLVCGK  140

Query  162  DFGVAYSPERINPGDTRYKLEDIPKVVGGITPEITDIVAEFYSKAFKYVV-KVKDCKTAE  220
            DF V+YSPERINPGD    +E I KVV+G T E+ +IVA+ YS      V K    K AE
Sbjct  141  DFFVGYSPERINPGDKVHTFETITKVVSGQTLEVLEIVADVYSSVVTAGVHKASSIKVAE  200

Query  221  ATKMLENMFRYINIALVNELAVAFEKMGINVWEVIEAAKTKPFGFMAFYPGPGVGGHCIP  280
            A+K++EN  R +NIAL+NELA+ F+K++I+  EV+ A+ TK   F+ F PG  VGGHCI 
Sbjct  201  AAKVIENTQRDVNIALMNELAIIFDKLDIDTNEVLKASGTK-WNFLNFKPGL-VGGHCIG  258

Query  281  VDPFYLRYSAWRHGAVLRLVEVAASINNYMPVHVVNLVEEGLAKLGKRIRGARVAVLGLA  340
            VDP+YL   A   G    ++  +  IN+ M+  + + V   L K G  ++GA V VLGL+
Sbjct  259  VDPYYLTHKAQEVGHHPEVILAGRRINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLT  318

Query  341  YKPDVNDARESPSIRIIEELVERGAVVRVHDPLVE--SVKTVYGVFQSTVDPLELVGWAD  398
            +K +  D R++  I+IIEEL E G  V V+D   +    K  +G+       L +V   D
Sbjct  319  FKENCPDLRNTKVIHIIEELKEYGLNVTVNDVEADKNEAKKFFGLDLIDTKELKMV---D  375

Query  399  AVVIAVNHTAY  409
             V++AV H  Y
Sbjct  376  VVLFAVPHKDY  386