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PAthogenisity Island DataBase (PAI DB)

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Homologs of hrcC gene of AY597277

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcC
( NP_791216.2 )

outer-membrane type III secretion protein HrcC

NC_004578
(Pseudomonas syringae DC3000)

0.0

2) HrcC
( YP_234292.1 )

outer-membrane type III secretion protein HrcC

NC_007005
(Pseudomonas syringae B728a)

0.0

3) hrcC
( YP_273539.1 )

type III outer membrane protein HrcC

NC_005773
(Pseudomonas syringae 1448A)

0.0

4) Pmen_0023
( YP_001185530.1 )

YscC/HrcC family type III secretion outer membrane protein

NC_009439
(Pseudomonas mendocina ymp)

0.0

5) PSEBR_a5375
( YP_004356884.1 )

type III secretion protein

NC_015379
(Pseudomonas brassicacearum NFM421)

5e-166

6) hrcC
( YP_005210961.1 )

protein HrcC

NC_016830
(Pseudomonas fluorescens F113)

1e-165

7) rscC
( YP_002870386.1 )

putative type III secretion protein

NC_012660
(Pseudomonas fluorescens SBW25)

8e-144

8) H045_00215
( YP_007395615.1 )

putative type III secretion protein

NC_020209
(Pseudomonas poae RE*1-1-14)

3e-143

9) rscC
( YP_006322237.1 )

type III secretion outer membrane protein RscC

NC_017911
(Pseudomonas fluorescens A506)

1e-142

10) hrcC
( YP_003883223.1 )

type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)

NC_014500
(Dickeya dadantii 3937)

9e-140

11) hrcC
( YP_003539947.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

7e-138

12) hrcC
( YP_003529907.1 )

type III secretion system outer membrane pore HrcC

NC_013961
(Erwinia amylovora CFBP1430)

7e-138

13) PCC21_022700
( YP_006646926.1 )

HrcC

NC_018525
(Pectobacterium carotovorum PCC21)

5e-131

14) hrcC
( YP_050195.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-130

15) PC1_2192
( YP_003017767.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_012917
(Pectobacterium carotovorum PC1)

1e-129

• Sequence Alignments

1) hrcC in NC_004578


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  929 bits (3519),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 574/702 (82%), Positives = 661/702 (95%), Gaps = 8/702 (1%)

Query  1    MRKALMWLPLLLIGVIPATWAVTPEAWKHTAYAYDARQTELSTALADFAREFGMSLDMSP  60
            MRKALMWLPLLLIG++P+TWA  P++WKHTAYAYDAR+TELSTAL+DFA+EFGM+LDM+P
Sbjct  1    MRKALMWLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAP  60

Query  61   VQGKLDGRIRAQNPEEFLERLSQEYHFQWFVYNDTLYVSPSSEHTSARIEVSPDAVDDLQ  120
            + GKLDGRIRA+NP+EFLERL+QEYHFQWFVYNDTLY+SP+SEHTSARIEVS+DAVDDLQ
Sbjct  61   ISGKLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQ  120

Query  121  TALTDVGLLDKRFGWGSLPDEGVVLVRGPAKYVEFVRDYSKKVEKPDEKADKQDVVVLPL  180
            TALTDVGLLDKRFGWGSLP+EGVVLVRGPAKYV++VRDYSKKV+  D K++KQDVVV++L
Sbjct  121  TALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTD-KGEKQDVVVFAL  179

Query  181  KYANAADRTIRYRDQQLVVAGVASILQELLESRSRGESIDSVNLLPGQGSSVANSTGV--  238
            KYANAADRTIRYRDQQL VAGVASILQELL++RSRG+SI++VNLL    ++ + S G   
Sbjct  180  KYANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGS  239

Query  239  AAAGLPYNLGSNGIDTGALQQGIDRVLNFNSKKTAKGHASG-KANIRVSADVRNNSVLIY  297
              + +PYNL++NGIDTGALQQG+DRVLN+ SKK++KG A+G +ANIRVSADVRNN+VLIY
Sbjct  240  DEPNVPYNLSANGIDTGALQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIY  299

Query  298  DLPERKAMYQKLVKELDVPRNLIEIDAVILDIDRNELAELSSRWNFNAGSVGGGANLFDA  357
            DLP+RKAMY+KL+KELDVPRNLIEIDAVILDIDRNELAEL+SRWNF++G+V    N+FDA
Sbjct  300  DLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGV----NMFDA  355

Query  358  GTSSTLFLQNASKFSAELHALEGNGSASVIGNPSILTLENQPAVIDLSRTEYLTATSERA  417
            GT+STLF+QNA+KFSAELHALEGNGSASVIGNPSILTLENQPAVID+SRTEY+TATSER 
Sbjct  356  GTTSTLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV  415

Query  418  ADILPITAGTSLQVIPRSLDNDGKPQVQMIVDIEDGQIDVSTINDTQPSVRRGNVSTQAV  477
            A+I PITAGTSLQVIPRSLD+DGKPQVQ+IVDIEDGQIDVS IN  QPSVR+GNVSTQAV
Sbjct  416  ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAV  475

Query  478  IAEHGSLVIGGFHGLEANDRIHKIPLLGDIPYIGKllfqsrsrelsqrerlfILTPRLIG  537
            IAEHGSLV+GGFHGLEAND++HKIPLLGDIPYIGKLLFQSRSRE+++RERLFILTPRLIG
Sbjct  476  IAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIG  535

Query  538  DQVNPARYVQNGNPHDVDDQMKKIKERRDGGELPTRGDIQKVFTQMIDGAAPEGLRAGQT  597
            DQVNPARYVQNGNPHD+D QMK IKERRDGG+LPTR D+Q+VFTQM+DG AP G+++G+T
Sbjct  536  DQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGET  595

Query  598  LPFETDSLCDPGEGLTLDGQRSQWFVKKDWGVAVVVARNNTDKPVRIDESRCGGRWVIGV  657
            +PFETDSLCDPG+GLTLD  RSQWFV+K+WGVAVVVA+NNT+KPVRIDESRCGGRWVIGV
Sbjct  596  MPFETDSLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGV  655

Query  658  AAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP  699
            +AWPHAW+QPGEESEVYIA+RQPQ+SKMAKESRPSLLR + P
Sbjct  656  TAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRTAP  697

2) HrcC in NC_007005


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  927 bits (3513),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 581/702 (83%), Positives = 660/702 (95%), Gaps = 7/702 (0%)

Query  1    MRKALMWLPLLLIGLSPATWAVTPEAWKHTAYAYDARQTELATALADFAKEFGMALDMPP  60
            MRKALMWLPLLLIG+ P+TWA  P++WKHTAYAYDAR+TEL+TAL+DFAKEFGMALDM+P
Sbjct  1    MRKALMWLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAP  60

Query  61   IPGVLDDRIRAQSPEEFLDRLGQEYHFQWFVYNDTLYVSPSSEHTSARIEVSSDAVDDLQ  120
            I+G LD+RIRA++P+EFL+RL+QEYHFQWFVYNDTLY+SP+SEHTSARIEVSSDAVDDLQ
Sbjct  61   ISGKLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQ  120

Query  121  TALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYSKKVEAPEKGDKQDIIVFPLK  180
            TALTDVGLLDKRFGWG LPNEGVVLVRGPAKYV+LVRDYSKKV++ +KG+KQD++VF+LK
Sbjct  121  TALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALK  180

Query  181  YASAADRTIRYRDQQLVVAGVASILQDLLDTRSRGGSINGMDllgrggrgnglagggSPD  240
            YA+AADRTIRYRDQQL VAGVASILQ+LLDTRSRG+SING++LLG+G  G GL+ GG++D
Sbjct  181  YANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSD  240

Query  241  APSLP--MSSSGLDTNALEQGLDQVLHYggggksagksrsggraNIRVTADVRNNAVLIY  298
             P++P  +S++G+DT AL+QGLD+VL+YG+   + GK+ +G   NIRV+ADVRNNAVLIY
Sbjct  241  EPNVPYNLSANGIDTGALQQGLDRVLNYGSKKSGKGKAGGGRA-NIRVSADVRNNAVLIY  299

Query  299  DLPSRKAMYEKLIKELDVSRNLIEIDAVILDIDRNELAELSSRWNFNAGSVNGGANMFDA  358
            DLP RKAMYEKLIKELDV+RNLIEIDAVILDIDRNELAEL+SRWNF++G+VN    MFDA
Sbjct  300  DLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGVN----MFDA  355

Query  359  GTSSTLFIQNAGKFAAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYLTATSERV  418
            GT+STLFIQNAGKF+AELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEY+TATSERV
Sbjct  356  GTTSTLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV  415

Query  419  ANIEPITAGTSLQVTPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAV  478
            ANIEPITAGTSLQV PRSLDHDGKPQVQLIVDIEDGQID+SDIN  QPSVRKGNVSTQAV
Sbjct  416  ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAV  475

Query  479  IAEHGSLVIGGFHGLEANDKVHKVPLLGDIPYIGKllfqsrsrelsqrerlfILTPRLIG  538
            IAEHGSLV+GGFHGLEANDKVHK+PLLGDIPYIGKLLFQSRSRE+++RERLFILTPRLIG
Sbjct  476  IAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIG  535

Query  539  DQVNPARYVQNGNPHDVDDQMKRIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGET  598
            DQVNPARYVQNGNPHD+D QMK IKERRDGG+LPTR D+Q+VFTQMVDG AP GMH GET
Sbjct  536  DQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGET  595

Query  599  LPFETDSLCDPGQGLSLDGQRSQWYARKDWGVAVVVARNNTDKPVRIDESRCGGRWVIGV  658
            +PFETDSLCDPG+GL+LD  RSQW+ +K+WGVAVVVA+NNT+KPVRIDESRCGGRWVIGV
Sbjct  596  MPFETDSLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGV  655

Query  659  AAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP  700
            +AWPHAW+QPGEESEVYIA+RQPQ+SKMAKESRPSLLR + P
Sbjct  656  TAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRTAP  697

3) hrcC in NC_005773


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  923 bits (3495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 587/702 (84%), Positives = 658/702 (94%), Gaps = 8/702 (1%)

Query  1    MRKALMWLPLLLIGLTPVTWAVTPEAWKHTAYAYDARQTELTTALADFAKEFGMALDMPS  60
            MRKALMWLPLLLIG+ P TWA  P++WKHTAYAYDAR+TEL+TAL+DFAKEFGMALDM++
Sbjct  1    MRKALMWLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAP  60

Query  61   IPGTLDGRIRAQSPEEFLDRLGQEYHFQWFVYNDTLYVSPSSEHTSARVEVSSDAVDDLQ  120
            I+G LDGRIRA++P+EFL+RL+QEYHFQWFVYNDTLY+SP+SEHTSAR+EVSSDAVDDLQ
Sbjct  61   ISGKLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQ  120

Query  121  TALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYSKKVETPEKGDKQDIVVFPLK  180
            TALTDVGLLDKRFGWG LPNEGVVLVRGPAKYV+LVRDYSKKV++ +KG+KQD+VVF+LK
Sbjct  121  TALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALK  180

Query  181  YANASDRTIRYRDQQLTVAGVASILQDLLDTRSRGEainginllghgganaglaggdadT  240
            YANA+DRTIRYRDQQLTVAGVASILQ+LLDTRSRG++ING+NLLGHG + +GL+ G++  
Sbjct  181  YANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSD  240

Query  241  QS---LPLDSSGIDTGALQQGLDRVLSYgsgskksgksrsggrANIRVTADVRNNAVLIY  297
            ++     L ++GIDTGALQQGLDRVL+YGS     GK+ +G  ANIRV+ADVRNNAVLIY
Sbjct  241  EPNVPYNLSANGIDTGALQQGLDRVLNYGSKKSGKGKAGGGR-ANIRVSADVRNNAVLIY  299

Query  298  DLPSRKPMYEKLIKELDVSRNLIEIDAVILDIDRNELAELSSRWNFNAGSVGGGVNLFDA  357
            DLP RK+MYEKLIKELDV+RNLIEIDAVILDIDRNELAEL+SRWNF++G    GVN+FDA
Sbjct  300  DLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSG----GVNMFDA  355

Query  358  GTSSTMFIQNAGKFSSELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV  417
            GT+ST+FIQNAGKFS+ELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV
Sbjct  356  GTTSTLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERV  415

Query  418  ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAV  477
            ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQID+SDIN  QPSVRKGNVSTQAV
Sbjct  416  ANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAV  475

Query  478  IAEHGSLVIGGFHGLEANDKVHKIPLLGDIPYIGKllfqsrsrelsqrerlfILTPRLIG  537
            IAEHGSLV+GGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSRE+++RERLFILTPRLIG
Sbjct  476  IAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIG  535

Query  538  DQVNPARYVQNGNPHDVDDQMKRIKERRDGGELPTRGDVQKVFTQMVDGTAPVGMRTGET  597
            DQVNPARYVQNGNPHD+D QMK IKERRDGG+LPTR DVQ+VFTQMVDG AP GM+TGET
Sbjct  536  DQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGET  595

Query  598  LPFETDSLCDPGAGLTLDGQRSQWYARKDWGVAVVVAHNNTDKPVRIDESRCGGRWVIGV  657
            +PFETDSLCDPG GLTLD  RSQW+ +K+WGVAVVVAHNNT+KPVRIDESRCGGRWVIGV
Sbjct  596  MPFETDSLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGV  655

Query  658  AAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLKGAKP  699
            +AWPHAW+QPGEESEVYIA+RQPQ+SKMAKESRPSLL+ + P
Sbjct  656  TAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRTAP  697

4) Pmen_0023 in NC_009439


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  754 bits (2852),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 462/684 (68%), Positives = 603/684 (89%), Gaps = 9/684 (1%)

Query  18   PAHAVPPESWKQTAYAYDARQTDLNSALADFAREFGLSLDMPPMDGIVDGRIRASNPQEF  77
            P+ A  P+SWK+TAYAYDAR+T+L++AL+DFA+EFG++LDM+P+ G +DGRIRA NPQEF
Sbjct  18   PTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGKLDGRIRAENPQEF  77

Query  78   LERLGREYQFQWFVYNETLYISPTREQTSARIEVSPDAVDDLENALTAIGLLDPRFGWGT  137
            LERL++EY+FQWFVYN+TLYISP+ E+TSARIEVS+DAVDDL+ ALT +GLLD RFGWG+
Sbjct  78   LERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGS  137

Query  138  LPEEGLVLVRGPAQYVQFIREYSQKVEEPEKAEKQDVIVFTLKYANAADRSIRYRDQELR  197
            LP+EG+VLVRGPA+YV+++R+YS+KV+  +K+EKQDV+VF+LKYANAADR+IRYRDQ+L 
Sbjct  138  LPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTIRYRDQQLT  197

Query  198  VAGVASILRELLETRSRGEPISGVGIFQPSGTTQGLAPTRPM---GLPYA-GMSgldggl  253
            VAGVASIL+ELL+TRSRG++I+GV ++  +    GL+         +PY  + +G+D G 
Sbjct  198  VAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYNLSANGIDTGA  257

Query  254  leqgldNVLGLAQsssrkrsesrsrsqirvsADVRNNAVLIYDLPERKAIYQGLIQQLDV  313
            L+QGLD VL  +   S K   + +R++IRVSADVRNNAVLIYDLP+RKA+Y+ LI++LDV
Sbjct  258  LQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIKELDV  317

Query  314  PRNLIEIDAVILDIDRNELAELSSRWAFNSGSVSGGANLFEPGTTSTLFIQDAGRFAAEL  373
            PRNLIEIDAVILDIDRNELAEL+SRW F+SG+V    N+F++GTTSTLFIQ+AG+F+AEL
Sbjct  318  PRNLIEIDAVILDIDRNELAELASRWNFKSGGV----NMFDAGTTSTLFIQNAGKFSAEL  373

Query  374  RALEGTGAASIMGNPSILTLENQPAVIDFSRTEYLTALAERVANIQPITAGTSLQVIPRS  433
            +ALEG G+AS++GNPSILTLENQPAVIDFSRTEY+TA +ERVANI+PITAGTSLQVIPRS
Sbjct  374  HALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIPRS  433

Query  434  LNQGSRSQVQLIVDIEDGQIIESNISEEQPSVRRGNVSTQAVIAEHGSLVIGGFHSLEAN  493
            L++++++QVQLIVDIEDGQI  S+I+ +QPSVR+GNVSTQAVIAEHGSLV+GGFH+LEAN
Sbjct  434  LDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLEAN  493

Query  494  DRINKIPLLGDIPVIGKLLFQSrnrefnrrerlfilTPRLIGDQVNPARYVQHGNPHNLD  553
            D+++KIPLLGDIP IGKLLFQSR+RE+N+RERLFILTPRLIGDQVNPARYVQ+GNPH++D
Sbjct  494  DKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHDID  553

Query  554  RQLREIDERRRGTERPSRGDIEHAFTQLLDGIHPSGFDSA-PLPLRAETLCNSDHGLTLD  612
             Q++ I ERR G + P+R D+++ FTQ++DG+ P+G +++  +P+ +++LC++++GLTLD
Sbjct  554  AQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETDSLCDPGDGLTLD  613

Query  613  AERSQWFARDGWGVAVVVARNDTAQPIRIDESRCGGRWAMGVSAWPRAWLQPGEESEVFI  672
              RSQWF + GWGVAVVVA+N+T +P+RIDESRCGGRW +GV+AWP+AW+QPGEESEV+I
Sbjct  614  QTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEESEVYI  673

Query  673  ALRQPQSLQKTGQGRTSLLHRSTP  696
            A+RQPQ  + + ++R SLL+R++P
Sbjct  674  AMRQPQLSKMAKESRPSLLRRTAP  697

5) PSEBR_a5375 in NC_015379


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  578 bits (2181),  Expect = 5e-166, Method: Compositional matrix adjust.
 Identities = 340/687 (50%), Positives = 510/687 (75%), Gaps = 34/687 (4%)

Query  49   AAVPTDWKNTPYAYDAQSTPLAKVLGDFANTFAVQLVIDGTVKGTVDGRMRAESPQAFLD  108
            AA+P  WK+T+YAYDA+ T L+  L+DFA+ F++ L + + + G +DGR+RAE+PQ FL+
Sbjct  21   AAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDM-APISGKLDGRIRAENPQEFLE  79

Query  109  RLGLENRFQWFMYGNTLYVSPLQNQDSTRLEVSADAVPDMKQALTDIGLLDPRFGWGELP  168
            RL+ E +FQWF+Y +TLY+SP  ++ S+R+EVS+DAV D++ ALTD+GLLD RFGWG LP
Sbjct  80   RLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLP  139

Query  169  DEGVVLVSGPERYVRLVAQFAEVRKTPE--EKQEVISFPLRYATAADRNVKYRGETLVIP  226
            +EGVVLV GP +YV LV +++    + +  EKQ+V+ F+L+YA AADR ++YR++ L ++
Sbjct  140  NEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTIRYRDQQLTVA  199

Query  227  GVASILKGLLESRS---AVSG---------------GMQTASPQASFQNMQNQQSMTMGN  268
            GVASIL+ LL++RS   +++G               G  +  P+ +++   + +++  G 
Sbjct  200  GVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYN--LSANGIDTGA  257

Query  269  IEQLAMNGMGRP-NTSRVPSGANSGAGGRGKIRVEADVRNNAVLIYDAPKRREIYTPLIR  327
            ++Q    G++R  N +   SG   ++GGR++IRV ADVRNNAVLIYD P R+ +Y  LI+
Sbjct  258  LQQ----GLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIK  313

Query  328  DVDVPRKLVEIDAIILDIDRTQLAELASNWNVESGDLIGGASMIRPGASSTVFIQDYGDF  387
            ++DVPR+L+EIDA+ILDIDR +LAELAS WN  SG    G +M+ +G++ST+FIQ+ G F
Sbjct  314  ELDVPRNLIEIDAVILDIDRNELAELASRWNFKSG----GVNMFDAGTTSTLFIQNAGKF  369

Query  388  SAQLRALEGRGLASVVANPSVLTLENQPAVIDFSRTEYISAIGERVATVEPITAGTSLQV  447
            SA+L+ALEG G ASV++NPS+LTLENQPAVIDFSRTEYI+A +ERVA +EPITAGTSLQV
Sbjct  370  SAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQV  429

Query  448  VPHAIETGGRNQIQMSLEIEDGRIEPSEVGQQTPSVRRGVVSTQAVMGESRSLVVGGFHT  507
            +P++++ +G+ Q+Q+ ++IEDG+I+ S++  + PSVR+G VSTQAV++E  SLVVGGFH 
Sbjct  430  IPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHG  489

Query  508  EETGDNLERVPWLGRIPLIGPLLFssttretsrrerVFILTPRLIGDQVDPARYISALDR  567
             E+ D+++++P LG IP IG LLF S +RE ++RER+FILTPRLIGDQV+PARY+   + 
Sbjct  490  LEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNP  549

Query  568  EQVDSAMARLEERRNGTRPVGRIEVSDVLAQLADGNIPATFKQAPSIPYSPDTLCALQPG  627
            +++D+ M  + ERR+G     R +V +V++Q+ DG  P+    + ++P+  D+LC    G
Sbjct  550  HDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETDSLCDPGDG  609

Query  628  LSLDAARAQWFAGPDYGIAVGVIRNDDQRRLRFDEASCGSRWTLATSAWPKVWLEPGEET  687
            L+LD +R+QWF   + G+AV V +N+ ++ +R+DE+ CG+RW ++ +AWP  W++PGEE+
Sbjct  610  LTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEES  669

Query  688  EVFVVMKQP--TRTPGGERPSLLQTSA  712
            EV++ M+QP  ++ +   RPSLL+ +A
Sbjct  670  EVYIAMRQPQLSKMAKESRPSLLRRTA  696

6) hrcC in NC_016830


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  576 bits (2176),  Expect = 1e-165, Method: Compositional matrix adjust.
 Identities = 339/685 (50%), Positives = 506/685 (74%), Gaps = 34/685 (4%)

Query  51   IPTDWKNTPYAYDAQSTPLAKVLGDFANTFAVQLVIDGTVKGTVDGRMRAESPQAFLDRL  110
            IP  WK+T+YAYDA+ T L+  L+DFA+ F++ L + + + G +DGR+RAE+PQ FL+RL
Sbjct  23   IPDSWKHTAYAYDARETELSTALSDFAKEFGMALDM-APISGKLDGRIRAENPQEFLERL  81

Query  111  GLENRFQWFMYGNTLYVSPLQNQDSTRLEVSADAVPDMKQALTDIGLLDPRFGWGELPDE  170
            + E +FQWF+Y +TLY+SP  ++ S+R+EVS+DAV D++ ALTD+GLLD RFGWG LP+E
Sbjct  82   AQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLPNE  141

Query  171  GVVLVSGPERYVRLVTQFAEARKTPE--EKQEVISFPLRYATAADRNVKYRGETLVIPGV  228
            GVVLV GP +YV LV +++    + +  EKQ+V+ F+L+YA AADR ++YR++ L ++GV
Sbjct  142  GVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTIRYRDQQLTVAGV  201

Query  229  ASILKGLLESRS---AVSG---------------GMQTASPQASFQNMQTQQSTTMGNIE  270
            ASIL+ LL++RS   +++G               G  +  P+ +++   + ++   G ++
Sbjct  202  ASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYN--LSANGIDTGALQ  259

Query  271  QLALNGMGRP-NTSRVPSGANSGAGARGKIRVEADVRNNAVLIYDAPKRREIYTPLIRDV  329
            Q    G++R  N +   SG   ++G+R++IRV ADVRNNAVLIYD P R+ +Y  LI+++
Sbjct  260  Q----GLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIKEL  315

Query  330  DVPRKLVEIDAIILDIDRTQLAELASNWNVESGDLIGGASMIRPGASSTVFIQDYGDFSA  389
            DVPR+L+EIDA+ILDIDR +LAELAS WN  SG    G +M+ +G++ST+FIQ+ G FSA
Sbjct  316  DVPRNLIEIDAVILDIDRNELAELASRWNFKSG----GVNMFDAGTTSTLFIQNAGKFSA  371

Query  390  QLRALEGRGLASVVANPSVLTLENQPAVIDFSRTEYISAIGERVATVEPITAGTSLQVVP  449
            +L+ALEG G ASV++NPS+LTLENQPAVIDFSRTEYI+A +ERVA +EPITAGTSLQV+P
Sbjct  372  ELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIP  431

Query  450  HAIETGGRNQIQMSLDIEDGRIEPSEVGQQTPSVRRGVVSTQAVMGESRSLVVGGFHTEE  509
            ++++ +G+ Q+Q+ +DIEDG+I+ S++  + PSVR+G VSTQAV++E  SLVVGGFH  E
Sbjct  432  RSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLE  491

Query  510  TGDNLERVPWLGRIPLIGPLLFssttretsrrerVFILTPRLIGDQVDPARYISALDREQ  569
            + D+++++P LG IP IG LLF S +RE ++RER+FILTPRLIGDQV+PARY+   + ++
Sbjct  492  ANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHD  551

Query  570  VDSAMARLEERRNGTRPVGRIEVSDVLAQLADGNIPGTFKQAASIPYSPDTLCALQPGLS  629
            +D+ M  + ERR+G     R +V +V++Q+ DG  P     + ++P+  D+LC    GL+
Sbjct  552  IDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETDSLCDPGDGLT  611

Query  630  LDAARAQWFAGPDYGIAVGVVRNDGQRRLRFDEASCGSRWALATSAWPKVWLEPGEETEV  689
            LD +R+QWF   + G+AV V +N+ ++ +R+DE+ CG+RW ++ +AWP  W++PGEE+EV
Sbjct  612  LDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEESEV  671

Query  690  FVVMKQP--TRTPGGERPSLLQTSA  712
            ++ M+QP  ++ +   RPSLL+ +A
Sbjct  672  YIAMRQPQLSKMAKESRPSLLRRTA  696

7) rscC in NC_012660


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  504 bits (1900),  Expect = 8e-144, Method: Compositional matrix adjust.
 Identities = 325/700 (47%), Positives = 496/700 (71%), Gaps = 29/700 (4%)

Query  27   WLVLLGCIMAPAHNLLAAIPAEWKNTAYAYEADHKPLREVLEDFAQTFGTQLQIEGLLEG  86
            WL LL   M P+    AAIP  WK+TAYAY+A +  L   L DFA+ FG  L++  +  G
Sbjct  7    WLPLLLIGMVPPT--WAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPI-SG  63

Query  87   DVNGKIRANTPQSMLDRLGVEHRFQWYLYNNTLFVSTLDQQESARLEVSSETISDLKQAL  146
             ++G+IRA+ PQ  L+RL+ E +FQW++YN+TL++S   ++ SAR+EVSS+++ DL+ AL
Sbjct  64   KLDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTAL  123

Query  147  TDIGLLDSRFGWGELPEDGVVLVSGPKTYIDQIKQFSSKRRSAD--EKQSVLSFPLKFAN  204
            TD+GLLD RFGWG LP++GVVLV GP  Y+D ++++S K  S+D  EKQ V+ F+LK+AN
Sbjct  124  TDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYAN  183

Query  205  AADRKVDYRGEKLVVPGVANILRGLLEPRS-ASTLTGMSQPDSSQPSPLTPNVPRLGNPL  263
            AADR + YR+++L V+GVA+IL+ LL+ RS + ++ G++  + ++P+   ++    ++P 
Sbjct  184  AADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPN  243

Query  264  LGQMLGANG-NAGQLDTG----------PTVTPRAPVSKSRIRVEADVRNNAVLIYDLPE  312
            +   L+ANG ++G L+ G           +   +A  +++ IRV ADVRNNAVLIYDLP+
Sbjct  244  VPYNLSANGIDTGALQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPD  303

Query  313  RQAMYRDLITQLDVARKlieidaiildieRTQLREFGVNWGFQNSRFRGGVNM-APGTSS  371
            R+AMY  LI +LDV+R+LIEIDA+ILDI+R +L E++  W F++    GGVNM  +GT+S
Sbjct  304  RKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKS----GGVNMFDAGTTS  359

Query  372  QVSIENRDRFYADIRALEAKGLATMVSNPSVLTLENQPAVIDFNRTQYISPGRD-YATIL  430
             + I+N ++F A+++ALE++G A++++NPS+LTLENQPAVIDF+RT+YI++  +  A I 
Sbjct  360  TLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIE  419

Query  431  PVTVGTSLQVVPRVTTGRGVHQIHLVVDIEDGNFDETNPERDPNHPDVRRGKVSTQAVMQ  490
            P+T GTSLQV+PR     G  Q++L+VDIEDG++D +  + ++++P VR+G+VSTQAV+ 
Sbjct  420  PITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVS--DINADQPSVRKGNVSTQAVIA  477

Query  491  EKRSLVVGGFHVTDSSDQQKKIPLLGDIPLLGKTLFSSTERHNNRRERLFILTPRVIGDQ  550
            E  SLVVGGFH  +++D+  KIPLLGDIP +GK LF S  R+ N+RERLFILTPR+IGDQ
Sbjct  478  EHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQ  537

Query  551  DDPSRYLPQDDQAELQAALTPL-ARRYSPHQPVIKRSDIITTLARLVSGEVPKAFNAA-P  608
             +P+RY+ +++  +++A +  +  RR + + P   R+D+   ++++V G  P + +++  
Sbjct  538  VNPARYVQNGNPHDIDAQMKTIKERRDGGDLP--TRNDVQNVFTQMVDGVAPPGMHTGET  595

Query  609  MPLGLNTLCSTRDLLALNTERSQWYAGPDYNVAVVVLRNQFKRNVRIDEKECSNSQTLAV  668
            MP+  ++LC   D L+L+  RSQW+   +  VAVVV +N+ ++ VRIDE  C+    ++V
Sbjct  596  MPFETDSLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGV  655

Query  669  TVWPRAWLKPGEEAEVFIAMRPVVKDEHLSVPRPSLITPT  708
            T WP+AW++PGEE+EV+IAMR          +RPSL+  T
Sbjct  656  TAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRT  695

8) H045_00215 in NC_020209


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  502 bits (1892),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 313/675 (47%), Positives = 474/675 (71%), Gaps = 18/675 (2%)

Query  43   AAIPSDWKNTAYAYEAEHKPLRDVLEDFAQTFGTQLQIDGLLDGVVNGKIRANTPQSLLD  102
            AAIP  WK+TAYAY+A +  L   L DFA+ FG  L++  +  G ++G+IRA+ PQ +L+
Sbjct  21   AAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPI-SGKLDGRIRAENPQEFLE  79

Query  103  RLGVEHRFQWYLYNNTLYISTLDLQESARLEVSAETVADLKRALTDIGLLDSRFGWGELP  162
            RL+ E +FQW++YN+TLYIS    + SAR+EVS+++V DL+ ALTD+GLLD RFGWG LP
Sbjct  80   RLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLP  139

Query  163  DDGVVLVSGPKRYIDQIKQFSSQRKSAD--EKQSVLSYPLKFANAGDRQIDYRGEKIAIP  220
            ++GVVLV GP +Y+D ++++S +  S+D  EKQ V+ ++LK+ANA+DR I YR+++++++
Sbjct  140  NEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTIRYRDQQLTVA  199

Query  221  GVASMLRGLLEPRSPSTLSTMSPRPSASQPSPITPNYPRLNNPILG-QMLGQTANAGQLE  279
            GVAS+L+ LL+ RS +         + ++P+   ++    ++P +  ++ ++  ++G L+
Sbjct  200  GVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYNLSANGIDTGALQ  259

Query  280  TG----------ATLTPRAPVSAGRIRVEADVRNNAVLIYDLPERQAMYRELITQLDVAR  329
             G           +   +A  + + IRV ADVRNNAVLIYDLP+R+AMY  LI +LDV+R
Sbjct  260  QGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIKELDVPR  319

Query  330  KMVEIDAIILDIERSQLREFGVNWGNSRFSSDMRLAPGSSSQLSIENRDRFFAKIRALEQ  389
            +++EIDA+ILDI+R++L E++  W     + +M + +G++S L I+N ++F A ++ALE 
Sbjct  320  NLIEIDAVILDIDRNELAELASRWNFKSGGVNM-FDAGTTSTLFIQNAGKFSAELHALEG  378

Query  390  RGLATMVSNPSVLTLENQPSVIDFNRTQYLTAGTE-VATVLPITVGTSLQVVPRVITTRG  448
             G A++++NPS+LTLENQP+VIDF+RT+Y+TA +E VA + PIT GTSLQV+PR +   G
Sbjct  379  NGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVIPRSLDHDG  438

Query  449  THQVHLLVDIEDGNFDESDPNRLGPDVRRGNVSTQAVMAEKRSLVVGGFHVTESIDKRNK  508
              QV+L+VDIEDG++D SD N   P VR+GNVSTQAV+AE  SLVVGGFH  E+ DK +K
Sbjct  439  KPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGLEANDKVHK  498

Query  509  IPLLGDIPLLGKALFssserknnrrerLFILTPRVIGDQADPSRYLPQDDQAELQAALKP  568
            IPLLGDIP +GK LF S  R  N+RERLFILTPR+IGDQ +P+RY+ +++  +++A +K 
Sbjct  499  IPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHDIDAQMKT  558

Query  569  LARRYAEHAPVIKRSDITGTLANLVTGRVPLAFKAA-PMPLGLATLCSTRDLLAMNTERS  627
            +  R  + + +  R+D+   ++++V G  P +  ++  MP+   +LC   D L+++  RS
Sbjct  559  IKER-RDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETDSLCDPGDGLTLDQTRS  617

Query  628  QWYAGPQFNVAVVVLRNQLKRNVRIDEKECSTSQTLAVTVWPRAWLKPGEEAEVFIAMRP  687
            QW+      VAVVV +N+ ++ VRIDE  C+    ++VT WP+AW++PGEE+EV+IAMR 
Sbjct  618  QWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEESEVYIAMRQ  677

Query  688  VVKDEHLSVPRPSLL  702
                     +RPSLL
Sbjct  678  PQLSKMAKESRPSLL  692

9) rscC in NC_017911


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  500 bits (1886),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 310/691 (45%), Positives = 486/691 (71%), Gaps = 28/691 (4%)

Query  34   LLVS-AQSALAAIPSEWKNTAYAYEAEHKPVREVLEDFAQTFGTQLQIEGLLEGIVNGKI  92
            LL++   ++ AAIP  WK+TAYAY+A +  +   L DFA+ FG  L++  +  G ++G+I
Sbjct  11   LLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPI-SGKLDGRI  69

Query  93   RANTPQSLLDRLGVEHRFQWYLYNNTLYVSTLDQQESARLEVSSETIADLKQALTDIGLL  152
            RA+ PQ +L+RL+ E +FQW++YN+TLY+S   ++ SAR+EVSS+++ DL+ ALTD+GLL
Sbjct  70   RAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLL  129

Query  153  DSRFGWGELPDDGIVLVSGPRRYIEQVKQFSSQRRSVD--EKQSVLSFPLKFANAADRHV  210
            D RFGWG LP++G+VLV GP +Y++ V+++S +  S D  EKQ V+ F+LK+ANAADR +
Sbjct  130  DKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTI  189

Query  211  DYRGQKITIAGVSSIVRGLLEPRSNATP------PALAQRPASQPAPLVPNVPRLSNPLL  264
             YR+Q++T+AGV+SI++ LL+ RS + +       + ++  ++ +    ++ P ++  L 
Sbjct  190  RYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYNLS  249

Query  265  GQMLATNSTPMPMD------IGATLTPRAPAPTSRIRVEADMRNNAVLIYDLPERQAMYR  318
            ++ + T +    +D         +   +A +  + IRV AD+RNNAVLIYDLP+R+AMY 
Sbjct  250  ANGIDTGALQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYE  309

Query  319  ELIAQLDVARKLVEIDTIILDIERTQLREFGVNWGFQNSRFRGGANM-APGTSQQLSIEN  377
             LI +LDV+R+L+EID++ILDI+R +L E++  W F++    GG NM  +GT+  L I+N
Sbjct  310  KLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKS----GGVNMFDAGTTSTLFIQN  365

Query  378  RDRFYADIRALEAKGLATMVSNPSVLTLENQPAVIDFNRTQYLTPGRQN-ATILPVTVGT  436
             ++F A+++ALE++G A++++NPS+LTLENQPAVIDF+RT+Y+T+  +  A I P+T GT
Sbjct  366  AGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGT  425

Query  437  SVQVVPRVITSRGSHQIHLVVDIEDGTFDESNPNRDLNNLDVRRGNVSTQAVMAEKRSMV  496
            S+QV+PR +   G  Q++L+VDIEDG +D S+ N D  +  VR+GNVSTQAV+AE  S+V
Sbjct  426  SLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPS--VRKGNVSTQAVIAEHGSLV  483

Query  497  VGGFHVTESTDKHNKVPLLGDIPLLGKALFssserqnnrrerLFIITPRVIGDQADPSRY  556
            VGGFH  E+ DK +K+PLLGDIP +GK LF S  R+ N+RERLFI+TPR+IGDQ +P+RY
Sbjct  484  VGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARY  543

Query  557  LPQADQAELQTALAPL-ARRNAPHQPEIKRSDIISTLAHLVTGEVPKAFKLA-PMPLGLN  614
            + +++  ++++ +  +  RR++ + P   R+D+ + ++++V G  P +   +  MP+  +
Sbjct  544  VQNGNPHDIDAQMKTIKERRDGGDLP--TRNDVQNVFTQMVDGVAPPGMHTGETMPFETD  601

Query  615  TLCSPRDLLALNTERSQWYAGPEYNVAVVVMRNQFNRNVRIDEKECSNSQTLAVTVWPRA  674
            +LC P D L+L+  RSQW+      VAVVV +N+ N+ VRIDE  C+    ++VT WP+A
Sbjct  602  SLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHA  661

Query  675  WLKPGEEAEVFIAMRPVKKDEHLSVPRPTLI  705
            W++PGEE+EV+IAMR  +       +RP+L+
Sbjct  662  WVQPGEESEVYIAMRQPQLSKMAKESRPSLL  692

10) hrcC in NC_014500


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  490 bits (1848),  Expect = 9e-140, Method: Compositional matrix adjust.
 Identities = 304/692 (44%), Positives = 494/692 (72%), Gaps = 26/692 (3%)

Query  18   W-SLVLMGMLPIAHAATPPDWSKGAYAYSAEQTPLSAVLQDFANSHGVDLVLGNIQDINV  76
            W +L+L+GM+P + AA P  W   AYAY A +T LS+ L DFA+  G+ L ++ I + ++
Sbjct  7    WLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISG-KL  65

Query  77   EAKIRADNAVAFLDRLALEHRFQWFVYNNVLYVSPQDEQTSVRIEVSQDAAPDMKQALTG  136
            +++IRA+N+  FL+RLA E +FQWFVYN+ LY+SP  E+TS RIEVS DA  D++ ALT+
Sbjct  66   DGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTD  125

Query  137  IGLLDSRFGWGELPEEGVVLVTGPAEYVNLIRNFSQQRET--KEDRRKVMIFPLRYASVS  194
            +GLLD RFGWG LP+EGVVLV GPA YV+L+R++S++ ++  K +++ V++F+L+YA+ +
Sbjct  126  VGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAA  185

Query  195  DRTIQYRDQRLVIPGVATILNELMDGNRNTPagasaaasgmgndgamaaasgggqdasqa  254
            DRTI+YRDQ+L ++GVA+IL+EL+D      +  +    G G+ G+  + +GG+++++ +
Sbjct  186  DRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVP  245

Query  255  IELNARAM--------LARLatrssggataaarkkDQLNGKVSADVRNNALLIRDDEKRR  306
             +L+A ++        L R+   +S  +  +    ++ N +VSADVRNNA+LI D   R+
Sbjct  246  YNLSANGIDTGALQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRK  305

Query  307  DEYQQLIDKIDVPQNLVNIDAIILDVDRTALSRLEANWQGKLGAVTGGANMMSG--SSTL  364
              Y++LI  +DVP+NL++IDA+ILD+DR  L+ L + W+ K    +GG NM  +  +STL
Sbjct  306  AMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFK----SGGVNMFDAGTTSTL  361

Query  365  FVSDFKRFFADIQALEGEGTASIVANPSVLTLENQPAVIDFSRTAFITATGERVANVQPV  424
            F+ +  +F A+++ALEG+G+AS+++NPS+LTLENQPAVIDFSRT +ITAT+ERVAN++P+
Sbjct  362  FIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPI  421

Query  425  TAGTSLQVTPRVVGRGSLSSIQLVIDIEDGQVE-TNTEGTASGVKRGTVSTQALIGENRA  483
            TAGTSLQV PR +++++ + +QL++DIEDGQ++ ++ ++  ++V++G VSTQA+I+E+ +
Sbjct  422  TAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGS  481

Query  484  LVLGGFHVEESGDRDKRVPLLGDIPWIGK-LFTSRQHEVSRRERLFILTPHLIGDQNDPT  542
            LV+GGFH  E+ D+  ++PLLGDIP IGK LF SR +E+++RERLFILTP+LIGDQ +P+
Sbjct  482  LVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPA  541

Query  543  RFVSADNRRQLNDAMGRVAQRNSKTDLFS--VVESAMRELASGQTPAGFTIDGSGA-RLS  599
            R+V  +N ++++  M  + +R    DL +   V++   ++  G +P+G   + + +    
Sbjct  542  RYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETD  601

Query  600  EFCRTSPSLSYQSNRHQWYSNLTLSLAVGVVKNIGTRPQRFDEANCASSRTLAVAAWPKT  659
             +C  + +L+ +  R QW+ +   ++AV V  N   +P R+DE+ C++ + ++V+AWP +
Sbjct  602  SLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHA  661

Query  660  TLAPGESTEVYLALLP---AKNAQPSRASLIK  688
             + PGE +EVY+A+     +K A+ SR+SL++
Sbjct  662  WVQPGEESEVYIAMRQPQLSKMAKESRPSLLR  693

11) hrcC in NC_013971


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  484 bits (1824),  Expect = 7e-138, Method: Compositional matrix adjust.
 Identities = 296/686 (44%), Positives = 480/686 (70%), Gaps = 47/686 (6%)

Query  26   AQTPADWKEQSYAYSADRTPLSTVLQDFADGHSVDLHLGNVEDTEVTAKIRAENASAFLD  85
            A  P  WK+ +YAY A  T LST L DFA   ++ L+++ + +  + ++IRAEN+  FL+
Sbjct  21   AAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGK-LDGRIRAENPQEFLE  79

Query  86   RLALEHHFQWFVYNNTLYVSPQDEQSSERLEISPDAAPDIKQALSGIGLLDPRFGWGELP  145
            RLA E HFQWFVYN+TLY+SP  E++S R+E+S+DA  D++ AL+++GLLD RFGWG LP
Sbjct  80   RLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLP  139

Query  146  DDGVVLVTGPPQYLELVKRFSEQREK--KEDRRKVMTFPLRYASVADRTIHYRDQTVVIP  203
            ++GVVLV GP++Y++LV+ +S + +   K +++ V+ F+L+YA+ ADRTI+YRDQ + ++
Sbjct  140  NEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTIRYRDQQLTVA  199

Query  204  GVATMLNELMNGKRAAPASASGIDS-------------------------TPGGPDTNSM  238
            GVA++L+EL++  R+   S +G++                          ++ G DT ++
Sbjct  200  GVASILQELLD-TRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYNLSANGIDTGAL  258

Query  239  MQNTQTLLSRLSSRNKTSNRAGGRDNEIEDVSGRISADVRNNALLIRDDDKRHDEYSQLI  298
             Q  + +L+  S ++  ++ +GGR N       R+SADVRNNA+LI D   R   Y +LI
Sbjct  259  QQGLDRVLNYGSKKSGKGKAGGGRANI------RVSADVRNNAVLIYDLPDRKAMYEKLI  312

Query  299  AKIDVPQNLVEIDAVILDIDRTALNRLEANWQAtlggvtggsslmsgsgtlFVSDFKRFF  358
              +DVP+NL+EIDAVILDIDR  L  L + W+  + +        + ++TLF+ +  +F 
Sbjct  313  KELDVPRNLIEIDAVILDIDRNELAELASRWN--FKSGGVNMFDAGTTSTLFIQNAGKFS  370

Query  359  ADIQALEGEGTASIVANPSVLTLENQPAVIDFSQTAYITATGERVADIQPVTAGTSLQVT  418
            A+++ALEG+G+AS+++NPS+LTLENQPAVIDFS+T YITAT+ERVA+I+P+TAGTSLQV 
Sbjct  371  AELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVI  430

Query  419  PRAVGNEGHSSIQLMIDIEDGHVQTNG-DGQATGVKRGTVSTQALISENRALVLGGFHVE  477
            PR+++++G + +QL++DIEDG+++ ++ +++  +V++G VSTQA+I+E+ +LV+GGFH  
Sbjct  431  PRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGL  490

Query  478  ESADRDRRIPLLGDIPWLGQ-LFSSKRHEISQRQRLFILTPRLIGDQTDPTRYVTADNRQ  536
            E+ D+ ++IPLLGDIP +G+ LF S+ +EI++R+RLFILTPRLIGDQ +P+RYV  +N +
Sbjct  491  EANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPH  550

Query  537  QLSDAMGRV-ERRHSS-VNQHDVVENALRDLAEGQSPAGFQP-QTSGTRLSEVCRSTPAL  593
            ++   M  + ERR+++ +  ++ V+N + ++ +G +P+G +  +T       +C +  +L
Sbjct  551  DIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETDSLCDPGDGL  610

Query  594  LFESTRGQWYSSSTNGVQLSVGVVRNTSSKPLRFDEANCASKRTLAVAVWPHSALAPGES  653
             ++ TR+QW+     GV  +V V +N ++KP+R+DE+ C++++ ++V+ WPH+ + PGE 
Sbjct  611  TLDQTRSQWFVQKGWGV--AVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEE  668

Query  654  AEVYLAM---DPSRVLHASRESLLNR  676
            +EVY+AM   + S++   SR SLL R
Sbjct  669  SEVYIAMRQPQLSKMAKESRPSLLRR  694

12) hrcC in NC_013961


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  484 bits (1824),  Expect = 7e-138, Method: Compositional matrix adjust.
 Identities = 296/686 (44%), Positives = 480/686 (70%), Gaps = 47/686 (6%)

Query  26   AQTPADWKEQSYAYSADRTPLSTVLQDFADGHSVDLHLGNVEDTEVTAKIRAENASAFLD  85
            A  P  WK+ +YAY A  T LST L DFA   ++ L+++ + +  + ++IRAEN+  FL+
Sbjct  21   AAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGK-LDGRIRAENPQEFLE  79

Query  86   RLALEHHFQWFVYNNTLYVSPQDEQSSERLEISPDAAPDIKQALSGIGLLDPRFGWGELP  145
            RLA E HFQWFVYN+TLY+SP  E++S R+E+S+DA  D++ AL+++GLLD RFGWG LP
Sbjct  80   RLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLP  139

Query  146  DDGVVLVTGPPQYLELVKRFSEQREK--KEDRRKVMTFPLRYASVADRTIHYRDQTVVIP  203
            ++GVVLV GP++Y++LV+ +S + +   K +++ V+ F+L+YA+ ADRTI+YRDQ + ++
Sbjct  140  NEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTIRYRDQQLTVA  199

Query  204  GVATMLNELMNGKRAAPASASGIDS-------------------------TPGGPDTNSM  238
            GVA++L+EL++  R+   S +G++                          ++ G DT ++
Sbjct  200  GVASILQELLD-TRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYNLSANGIDTGAL  258

Query  239  MQNTQTLLSRLSSRNKTSNRAGGRDNEIEDVSGRISADVRNNALLIRDDDKRHDEYSQLI  298
             Q  + +L+  S ++  ++ +GGR N       R+SADVRNNA+LI D   R   Y +LI
Sbjct  259  QQGLDRVLNYGSKKSGKGKAGGGRANI------RVSADVRNNAVLIYDLPDRKAMYEKLI  312

Query  299  AKIDVPQNLVEIDAVILDIDRTALNRLEANWQAtlggvtggsslmsgsgtlFVSDFKRFF  358
              +DVP+NL+EIDAVILDIDR  L  L + W+  + +        + ++TLF+ +  +F 
Sbjct  313  KELDVPRNLIEIDAVILDIDRNELAELASRWN--FKSGGVNMFDAGTTSTLFIQNAGKFS  370

Query  359  ADIQALEGEGTASIVANPSVLTLENQPAVIDFSQTAYITATGERVADIQPVTAGTSLQVT  418
            A+++ALEG+G+AS+++NPS+LTLENQPAVIDFS+T YITAT+ERVA+I+P+TAGTSLQV 
Sbjct  371  AELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITAGTSLQVI  430

Query  419  PRAVGNEGHSSIQLMIDIEDGHVQTNG-DGQATGVKRGTVSTQALISENRALVLGGFHVE  477
            PR+++++G + +QL++DIEDG+++ ++ +++  +V++G VSTQA+I+E+ +LV+GGFH  
Sbjct  431  PRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLVVGGFHGL  490

Query  478  ESADRDRRIPLLGDIPWLGQ-LFSSKRHEISQRQRLFILTPRLIGDQTDPTRYVTADNRQ  536
            E+ D+ ++IPLLGDIP +G+ LF S+ +EI++R+RLFILTPRLIGDQ +P+RYV  +N +
Sbjct  491  EANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPH  550

Query  537  QLSDAMGRV-ERRHSS-VNQHDVVENALRDLAEGQSPAGFQP-QTSGTRLSEVCRSTPAL  593
            ++   M  + ERR+++ +  ++ V+N + ++ +G +P+G +  +T       +C +  +L
Sbjct  551  DIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETDSLCDPGDGL  610

Query  594  LFESTRGQWYSSSTNGVQLSVGVVRNTSSKPLRFDEANCASKRTLAVAVWPHSALAPGES  653
             ++ TR+QW+     GV  +V V +N ++KP+R+DE+ C++++ ++V+ WPH+ + PGE 
Sbjct  611  TLDQTRSQWFVQKGWGV--AVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWVQPGEE  668

Query  654  AEVYLAM---DPSRVLHASRESLLNR  676
            +EVY+AM   + S++   SR SLL R
Sbjct  669  SEVYIAMRQPQLSKMAKESRPSLLRR  694

13) PCC21_022700 in NC_018525


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  461 bits (1738),  Expect = 5e-131, Method: Compositional matrix adjust.
 Identities = 280/689 (41%), Positives = 489/689 (71%), Gaps = 47/689 (6%)

Query  35   GMLSLAHAATPADWNKGAYAYSAEQTPLSAILTDFANSHGVDLVLGNIADNEVTAKIRAD  94
            GM++ + AA P  W+  AYAY A +T LS+ L+DFA+  G+ L ++ I+++ + ++IRA+
Sbjct  14   GMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGK-LDGRIRAE  72

Query  95   NPTLFLDRLALEHRFQWFVYNNALYVSSQDEQASVRLEISPDAAPDIKQALSGIGLLDAR  154
            NP  FL+RLA E +FQWFVYN++LY+S+  E++S R+E+S+DA  D++ AL+++GLLD R
Sbjct  73   NPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKR  132

Query  155  FGWGELPEEGVVLVTGPQAYIDLIRNFSQQREKQD--ERRKVMIFPLRYASVSDRTLQYR  212
            FGWG LP+EGVVLV GP  Y+DL+R++S++ +  D  E++ V++F+L+YA+ +DRT++YR
Sbjct  133  FGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTIRYR  192

Query  213  DQKVTIPGVATILNELMDGQ-RAAPAGASGPMPV--------------QPD-------NG  250
            DQ++T++GVA+IL+EL+D + R+ +  +   +                +P+       NG
Sbjct  193  DQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYNLSANG  252

Query  251  ME--AMRESTRSLMTRLATRNNPGRNGEASGRVTLSGKISADVRNNALLIRDDEKRRAEY  308
            ++  A++++   ++   + ++  G+ G + + + +S+ +    RNNA+LI D   R+A Y
Sbjct  253  IDTGALQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADV----RNNAVLIYDLPDRKAMY  308

Query  309  QQLVDHIDVPQNLVNIDAIILDVDRTALSRLEANWQAQLGNVS---AGSTMMMGRSTLFV  365
            ++L+ ++DVP+NL++IDA+ILD+DR  L+ L + W+ + G V+   AG+T     STLF+
Sbjct  309  EKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGVNMFDAGTT-----STLFI  363

Query  366  SDFKRFFADIQALEGEGTASIVANPSVLTLENQPAIVDFSRTAFITATGERVADIQPVTA  425
             +  +F A+++ALEG+G+AS+++NPS+LTLENQPA++DFSRT +ITAT+ERVA+I+P+TA
Sbjct  364  QNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPITA  423

Query  426  GTSLQVTPRVIGEGAQRSIQLVIDIEDGQVETGR-EGEASGVKRGTVSTQALIGENRALV  484
            GTSLQV PR ++++++  +QL++DIEDGQ++ +  +++ ++V++G VSTQA+I+E+ +LV
Sbjct  424  GTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGSLV  483

Query  485  LGGFHVEESGDRDRRIPILGDIPLLGQ-LFTSTRHEVSRRERLFILTPHLVGDQTDPTRY  543
            +GGFH  E+ D+ ++IP+LGDIP +G+ LF S  +E+++RERLFILTP+L+GDQ +P+RY
Sbjct  484  VGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARY  543

Query  544  VSSANRQQLNGAMNRVAQRNGKTDLYSL--IEGAFRDLASRQLPAGFQA-DGKGTRLGEV  600
            V ++N +++++ M+ + +R +  DL +   ++  F ++     P+G ++ +      + +
Sbjct  544  VQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETDSL  603

Query  601  CRSQSGLIYDSSRYQWYSNGQVRLSVGVVRNGGTQAQRFDEAACASNRTLAVAVWPKTTL  660
            C +  GL  D +R QW+ +    ++V V +N   ++ R+DE+ C++ + ++V+ WP + +
Sbjct  604  CDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHAWV  663

Query  661  APGESSEVFLAL-QPALT--PQPARRNLL  686
             PGE SEV++A+ QP L+  ++ +R +LL
Sbjct  664  QPGEESEVYIAMRQPQLSKMAKESRPSLL  692

14) hrcC in NC_004547


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  460 bits (1732),  Expect = 1e-130, Method: Compositional matrix adjust.
 Identities = 281/702 (41%), Positives = 494/702 (71%), Gaps = 54/702 (7%)

Query  23   W-AIVLIGIIPVNGVISLAYAATPADWNKGAYAYSAEQTPLSAILADFANSHGVDLVLGN  81
            W +++LIG++P       + AA P  W+  AYAY A +T LS+ L+DFA+  G+ L ++ 
Sbjct  7    WLPLLLIGMVPP------TWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAP  60

Query  82   IADNEVTAKIRADNPTLFLDRLALEHRFQWFVYNNALYVSPQDEQASVRLEISPDAAPDI  141
            I+++ + ++IRA+NP  FL+RLA E +FQWFVYN++LY+SP  E++S R+E+S+DA  D+
Sbjct  61   ISGK-LDGRIRAENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDL  119

Query  142  KQALSGIGLIDSRFGWGELPEEGVVLVTGPKAYIDLIRNFSQQREKQD--ERRKVMIFPL  199
            + AL+++GL+D RFGWG LP+EGVVLV GP  Y+DL+R++S++ +  D  E++ V++F+L
Sbjct  120  QTALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFAL  179

Query  200  RYASVSDRTLQYRDQKITIPGVATILNELMDGQ-RAAPAGASGPMPV-------------  245
            +YA+ +DRT++YRDQ++T++GVA+IL+EL+D + R+ +  +   +               
Sbjct  180  KYANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGS  239

Query  246  -QPD-------TGME--AMRDSTRSLMTRLATRTSPGRSGEASSRVTLSGKISADVRNNA  295
             +P+        G++  A++++   ++   + +++ G++G + + + +S+ +  +    A
Sbjct  240  DEPNVPYNLSANGIDTGALQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNN----A  295

Query  296  LLIRDDEKRRAEYQQLVEHIDVPQNLVNIDAIILDVDRTALSRLEANWQAQLGNVS---A  352
            +LI D   R+A Y++L+ ++DVP+NL++IDA+ILD+DR  L+ L + W+ + G V+   A
Sbjct  296  VLIYDLPDRKAMYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGVNMFDA  355

Query  353  GSTMMMGRSTLFVSDFKRFFADIQALEGEGTASIVANPSVLTLENQPAIVDFSRTAFITA  412
            G+T     STLF+ +  +F A+++ALEG+G+AS+++NPS+LTLENQPA++DFSRT +ITA
Sbjct  356  GTT-----STLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITA  410

Query  413  TGERVADIQPVTAGTSLQVTPRVIGEGAQRSIQLVIDIEDGQVETGR-EGEASGVKRGTV  471
            T+ERVA+I+P+TAGTSLQV PR ++++++  +QL++DIEDGQ++ +  +++ ++V++G V
Sbjct  411  TSERVANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNV  470

Query  472  STQALIGENRALVLGGFHVEESGDRDRRIPILGDIPLLGK-LFTSTRHEVSRRERLFILT  530
            STQA+I+E+ +LV+GGFH  E+ D+ ++IP+LGDIP +GK LF S  +E+++RERLFILT
Sbjct  471  STQAVIAEHGSLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILT  530

Query  531  PHLVGDQTDPTRYVSSVNRQQLNGAMNRVAQRNGKTDLYSL--IEGAFRDLASRQLPAGF  588
            P+L+GDQ +P+RYV + N +++++ M+ + +R +  DL +   ++  F ++     P+G 
Sbjct  531  PRLIGDQVNPARYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGM  590

Query  589  QA-DSKGARLGEVCRSQSGLIYDSSRYQWYGNGQVRLSVGVVRNGGTQPQRFDEAACASS  647
            ++ ++     + +C +  GL  D +R QW+ +    ++V V +N   +P R+DE+ C++ 
Sbjct  591  HTGETMPFETDSLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGR  650

Query  648  RTLAVAVWPKTTLAPGESSEVFLAL-QPALT--AQPTRRNVL  686
            + ++V+ WP + + PGE SEV++A+ QP L+  A+ +R ++L
Sbjct  651  WVIGVTAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLL  692

15) PC1_2192 in NC_012917


> AY597277|34|G34|51103005|AAT96152.1|Pseudomonas_viridiflava_LP23.1a|-|29690..31783|hrcC|-|HrcC
Length=697

 Score =  457 bits (1720),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 276/681 (41%), Positives = 480/681 (71%), Gaps = 45/681 (6%)

Query  33   MNGVISLAHAATPADWNKGAYAYSAEQTPLSAILTDFANSHGVDLVLGNIADNDVTAKIR  92
            + G+++ + AA P  W+  AYAY A +T LS+ L+DFA+  G+ L ++ I+++ + ++IR
Sbjct  12   LIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGK-LDGRIR  70

Query  93   AETPVLFLDRLALEHRFQWFVYNNALYVSPQDEQASVRLEISPDAAPDIKQALSGIGLLD  152
            AE P  FL+RLA E +FQWFVYN++LY+SP  E++S R+E+S+DA  D++ AL+++GLLD
Sbjct  71   AENPQEFLERLAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLD  130

Query  153  ARFGWGELPEEGVVLVTGPQAYIDLIRNFSQQREKQD--ERRKVMIFPLRYASVSDRTLQ  210
             RFGWG LP+EGVVLV GP  Y+DL+R++S++ +  D  E++ V++F+L+YA+ +DRT++
Sbjct  131  KRFGWGSLPNEGVVLVRGPAKYVDLVRDYSKKVDSTDKGEKQDVVVFALKYANAADRTIR  190

Query  211  YRDQKVTIPGVATILNELMDGQ-RAAPAGASGPMPV--------------QPD-------  248
            YRDQ++T++GVA+IL+EL+D + R+ +  +   +                +P+       
Sbjct  191  YRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSDEPNVPYNLSA  250

Query  249  TGME--AMRDSTRSLMTRLATRNNPGRSGDASSRVTLSGKISADVRNNALLIRDDEKRRA  306
             G++  A++++   ++   + ++  G++G++ + + +S+ +  +    A+LI D   R+A
Sbjct  251  NGIDTGALQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNN----AVLIYDLPDRKA  306

Query  307  EYQQLVDHIDVPQNLVNIDAIILDVDRTALSRLEANWQAQLGNVS---AGSTMMMGRSTL  363
             Y++L+ ++DVP+NL++IDA+ILD+DR  L+ L + W+ + G V+   AG+T     STL
Sbjct  307  MYEKLIKELDVPRNLIEIDAVILDIDRNELAELASRWNFKSGGVNMFDAGTT-----STL  361

Query  364  FVSDFKRFFADIQALEGEGTASIVANPSVLTLENQPAIVDFSRTAFITATGERVADIQPV  423
            F+ +  +F A+++ALEG+G+AS+++NPS+LTLENQPA++DFSRT +ITAT+ERVA+I+P+
Sbjct  362  FIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYITATSERVANIEPI  421

Query  424  TAGTSLQVTPRVVGEGAQRSIQLVIDIEDGQVETGR-EGEASGVKRGTVSTQALIGENRA  482
            TAGTSLQV PR ++++++  +QL++DIEDGQ++ +  +++ ++V++G VSTQA+I+E+ +
Sbjct  422  TAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHGS  481

Query  483  LVLGGFHVEESGDRDRRIPILGDIPLLGK-LFTSTRHEVSRRERLFILTPHLVGDQTDPT  541
            LV+GGFH  E+ D+ ++IP+LGDIP +GK LF S  +E+++RERLFILTP+L+GDQ +P+
Sbjct  482  LVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPA  541

Query  542  RYVSSANRQQLNGAMNRVAQRNGKTDLYSL--IEGAFRDLASRQLPAGFKTVSNGA-RLG  598
            RYV ++N +++++ M+ + +R +  DL +   ++  F ++     P+G  T    +   +
Sbjct  542  RYVQNGNPHDIDAQMKTIKERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETD  601

Query  599  EVCRSQSGLIYDSSRYQWYDNGQVRLSVGVVRNGGTQPQRFDEAACASSRTLAVAVWPKT  658
             +C +  GL  D +R QW+ +    ++V V +N   +P R+DE+ C++ + ++V+ WP +
Sbjct  602  SLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPVRIDESRCGGRWVIGVTAWPHA  661

Query  659  TLAPGESSEVFLAL-QPALAS  678
             + PGE SEV++A+ QP L+ 
Sbjct  662  WVQPGEESEVYIAMRQPQLSK  682