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PAthogenisity Island DataBase (PAI DB)

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Homologs of avrE gene of AF232004

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) avrE1
( NP_791204.1 )

type III effector protein AvrE1

NC_004578
(Pseudomonas syringae DC3000)

0.0

2) avrE1
( YP_273527.1 )

type III effector AvrE1

NC_005773
(Pseudomonas syringae 1448A)

0.0

3) AvrE1
( YP_234280.1 )

type III effector protein AvrE1

NC_007005
(Pseudomonas syringae B728a)

0.0

• Sequence Alignments

1) avrE1 in NC_004578


> AF232004|36|G35|8037792|AAF71499.1|Pseudomonas_syringae_pv._tomato_DC3000|+|34461..39848|avrE|-|AvrE
Length=1795

 Score = 2789 bits (10604),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1792/1795 (99%), Positives = 1793/1795 (99%), Gaps = 0/1795 (0%)

Query  1     MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLSSVGKRALKSVGKLFqk  60
             MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLSSVGKRALKSVGKLFQK
Sbjct  1     MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLSSVGKRALKSVGKLFQK  60

Query  61    skapqqkaatpptakNVKTPPPASNVATPRNKARESGFSNSSPQNTHSAPKSILRNHPNQ  120
             SKAPQQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSSPQNTH APK ILRNHPNQ
Sbjct  61    SKAPQQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSSPQNTHRAPKWILRNHPNQ  120

Query  121   ASSSGAQTHEIHPEAAPRKNLRVRFDLPQDRLERSPSYLDSDNPMTDEEAVANATRQFRS  180
             ASSSGAQTHEIHPEAAPRKNLRVRFDLPQDRLERSPSYLDSDNPMTDEEAVANATRQFRS
Sbjct  121   ASSSGAQTHEIHPEAAPRKNLRVRFDLPQDRLERSPSYLDSDNPMTDEEAVANATRQFRS  180

Query  181   PDSHLQGSDGTRISMLATDPDQpsssgskigdsdgpiPPREPMLWRSNGGRFELKDEKLV  240
             PDSHLQGSDGTRISMLATDPDQPSSSGSKIGDSDGPIPPREPMLWRSNGGRFELKDEKLV
Sbjct  181   PDSHLQGSDGTRISMLATDPDQPSSSGSKIGDSDGPIPPREPMLWRSNGGRFELKDEKLV  240

Query  241   RNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILATPKQTYLAHQSKDGVHGHQLLQAN  300
             RNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILATPKQTYLAHQSKDGVHGHQLLQAN
Sbjct  241   RNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILATPKQTYLAHQSKDGVHGHQLLQAN  300

Query  301   GHLLHLAQDDSSLAVIRSSNEALLIEGKKPPAVKMEREDGNIHIDTASGRKTQELPGKAH  360
             GH+LHLAQDDSSLAVIRSSNEALLIEGKKPPAVKMEREDGNIHIDTASGRKTQELPGKAH
Sbjct  301   GHFLHLAQDDSSLAVIRSSNEALLIEGKKPPAVKMEREDGNIHIDTASGRKTQELPGKAH  360

Query  361   IAHITNVLLSHDGERMRVHEDRLYQFDPISTRWKIPEGLEDTAFNSLSTGGNGSVYAKSD  420
             IAHITNVLLSHDGERMRVHEDRLYQFDPISTRWKIPEGLEDTAFNSLSTGGNGSVYAKSD
Sbjct  361   IAHITNVLLSHDGERMRVHEDRLYQFDPISTRWKIPEGLEDTAFNSLSTGGNGSVYAKSD  420

Query  421   DAVVDLSSPFMPHVEVEDLQSFSVAPDNRAALLSGKTTQAILLTDMSPVIGGLTPKKTKG  480
             DAVVDLSSPFMPHVEVEDLQSFSVAPDNRAALLSGKTTQAILLTDMSPVIGGLTPKKTKG
Sbjct  421   DAVVDLSSPFMPHVEVEDLQSFSVAPDNRAALLSGKTTQAILLTDMSPVIGGLTPKKTKG  480

Query  481   LELDGGKAQAAAVGLSGDKLFIADTQGRLYSADRSAFEGDDPKLKLMPEQANFQLEGVPL  540
             LELDGGKAQAAAVGLSGDKLFIADTQGRLYSADRSAFEGDDPKLKLMPEQANFQLEGVPL
Sbjct  481   LELDGGKAQAAAVGLSGDKLFIADTQGRLYSADRSAFEGDDPKLKLMPEQANFQLEGVPL  540

Query  541   GGHNRVTGFINGDDGGVHALIKNRQGETHSHALDEQSSKLQSGWNLTNALVLNNNRGLTM  600
             GGHNRVTGFINGDDGGVHALIKNRQGETHSHALDEQSSKLQSGWNLTNALVLNNNRGLTM
Sbjct  541   GGHNRVTGFINGDDGGVHALIKNRQGETHSHALDEQSSKLQSGWNLTNALVLNNNRGLTM  600

Query  601   PPPPTAADRLNLDRAGLVGLSEGRIQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGG  660
             PPPPTAADRLNLDRAGLVGLSEGRIQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGG
Sbjct  601   PPPPTAADRLNLDRAGLVGLSEGRIQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGG  660

Query  661   KLHALKIAAEHPNMAFDRNTALAQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKRFVALD  720
             KLHALKIAAEHPNMAFDRNTALAQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKRFVALD
Sbjct  661   KLHALKIAAEHPNMAFDRNTALAQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKRFVALD  720

Query  721   DQNKLTAHSKDHKPVTLDIPGLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQSTKLG  780
             DQNKLTAHSKDHKPVTLDIPGLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQSTKLG
Sbjct  721   DQNKLTAHSKDHKPVTLDIPGLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQSTKLG  780

Query  781   DQLRARWTPVALPGGQPVKALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQRPVEEN  840
             DQLRARWTPVALPGGQPVKALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQRPVEEN
Sbjct  781   DQLRARWTPVALPGGQPVKALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQRPVEEN  840

Query  841   GLNDVHSRITGSNKTWRIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYKNTAET  900
             GLNDVHSRITGSNKTWRIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYKNTAET
Sbjct  841   GLNDVHSRITGSNKTWRIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYKNTAET  900

Query  901   PRWMKNVGDHIQHRYQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKARITALE  960
             PRWMKNVGDHIQHRYQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKARITALE
Sbjct  901   PRWMKNVGDHIQHRYQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKARITALE  960

Query  961   AKLGPQGATLVKELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGELAKPSV  1020
             AKLGPQGATLVKELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGELAKPSV
Sbjct  961   AKLGPQGATLVKELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGELAKPSV  1020

Query  1021  RMQFGKKLADLGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGLKLSHQ  1080
             RMQFGKKLADLGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGLKLSHQ
Sbjct  1021  RMQFGKKLADLGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGLKLSHQ  1080

Query  1081  KADIPLGQRRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKKLATLR  1140
             KADIPLGQRRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKKLATLR
Sbjct  1081  KADIPLGQRRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKKLATLR  1140

Query  1141  DVTYGENPVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSKDQAEL  1200
             DVTYGENPVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSKDQAEL
Sbjct  1141  DVTYGENPVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSKDQAEL  1200

Query  1201  AGKFKSMLKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYILNAER  1260
             AGKFKSMLKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYILNAER
Sbjct  1201  AGKFKSMLKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYILNAER  1260

Query  1261  CEGGVTLYLISEgagnvsggfgagKDYWPGFFDANNPARSVDVGNNRTLTPNFRLGVDVT  1320
             CEGGVTLYLISEGAGNVSGGFGAGKDYWPGFFDANNPARSVDVGNNRTLTPNFRLGVDVT
Sbjct  1261  CEGGVTLYLISEGAGNVSGGFGAGKDYWPGFFDANNPARSVDVGNNRTLTPNFRLGVDVT  1320

Query  1321  ATVAASQRAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFDLTAGG  1380
             ATVAASQRAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFDLTAGG
Sbjct  1321  ATVAASQRAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFDLTAGG  1380

Query  1381  TADIRAGINLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDKTELKE  1440
             TADIRAGINLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDKTELKE
Sbjct  1381  TADIRAGINLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDKTELKE  1440

Query  1441  GGKNRPRFLNNVTAGGQLRAQIGGSHtaptgtpasapgptpasqtaaNNLGGALNFSVEN  1500
             GGKNRPRFLNNVTAGGQLRAQIGGSHTAPTGTPASAPGPTPASQTAANNLGGALNFSVEN
Sbjct  1441  GGKNRPRFLNNVTAGGQLRAQIGGSHTAPTGTPASAPGPTPASQTAANNLGGALNFSVEN  1500

Query  1501  RTVKRIKFRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARYTGKKPDEV  1560
             RTVKRIKFRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARYTGKKPDEV
Sbjct  1501  RTVKRIKFRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARYTGKKPDEV  1560

Query  1561  IQAQLDGLEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDNARFETSKTNL  1620
             IQAQLDGLEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDNARFETSKTNL
Sbjct  1561  IQAQLDGLEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDNARFETSKTNL  1620

Query  1621  SGLSSESILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGSIGTLARVRLEPK  1680
             SGLSSESILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGSIGTLARVRLEPK
Sbjct  1621  SGLSSESILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGSIGTLARVRLEPK  1680

Query  1681  DSLVDKIDEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAENFTSPTPLVSYNSG  1740
             DSLVDKIDEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAENFTSPTPLVSYNSG
Sbjct  1681  DSLVDKIDEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAENFTSPTPLVSYNSG  1740

Query  1741  ANVSVTKTLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAGDLKKEGFELKS  1795
             ANVSVTKTLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAGDLKKEGFELKS
Sbjct  1741  ANVSVTKTLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAGDLKKEGFELKS  1795

2) avrE1 in NC_005773


> AF232004|36|G35|8037792|AAF71499.1|Pseudomonas_syringae_pv._tomato_DC3000|+|34461..39848|avrE|-|AvrE
Length=1795

 Score = 2348 bits (8923),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1441/1608 (90%), Positives = 1549/1608 (97%), Gaps = 5/1608 (0%)

Query  109   TRQPVTRAGHSGASTCGTKAQDPDEPATLQSSRQSMMTRSNGGRFELKDEKLVRNSEPQG  168
             TR ++  ++   +S+ G+K  D+D P    ++R++M+ RSNGGRFELKDEKLVRNSEPQG
Sbjct  191   TRISMLATDPDQPSSSGSKIGDSDGPI---PPREPMLWRSNGGRFELKDEKLVRNSEPQG  247

Query  169   SIQLDAKGKPDFSTFNTPGLAPLLDSILATPRQTYLAHQSKDGVHGHQLLQANGHLLHLA  228
             SIQLDAKGKPDFSTFNTPGLAPLLDSILATP+QTYLAHQSKDGVHGHQLLQANGH+LHLA
Sbjct  248   SIQLDAKGKPDFSTFNTPGLAPLLDSILATPKQTYLAHQSKDGVHGHQLLQANGHFLHLA  307

Query  229   QDDSSLALIRSSKEALHIEGKKPPAVKLEREDGNIHIDTASGRKTQELPGKAHIAHITGV  288
             QDDSSLA+IRSS+EAL IEGKKPPAVK+EREDGNIHIDTASGRKTQELPGKAHIAHIT V
Sbjct  308   QDDSSLAVIRSSNEALLIEGKKPPAVKMEREDGNIHIDTASGRKTQELPGKAHIAHITNV  367

Query  289   LLRHDGERMRVHEDRLYQFDPLSARWKAPEGTEDIAFNSLATGGKGSVYAKSDDVVVDLT  348
             LL HDGERMRVHEDRLYQFDP+S+RWK PEG ED AFNSL+TGG+GSVYAKSDD VVDL+
Sbjct  368   LLSHDGERMRVHEDRLYQFDPISTRWKIPEGLEDTAFNSLSTGGNGSVYAKSDDAVVDLS  427

Query  349   SPFMPHIEVKDLQSFSVAPDNRAALLSGKETQAILLTDMSPVIGDLTEKKTKALELDGGK  408
             SPFMPH+EV DLQSFSVAPDNRAALLSGK TQAILLTDMSPVIG+LT KKTK+LELDGGK
Sbjct  428   SPFMPHVEVEDLQSFSVAPDNRAALLSGKTTQAILLTDMSPVIGGLTPKKTKGLELDGGK  487

Query  409   AQAAAVGLSDNKLFIADTQGRLYSADRSAFESNDPQLKLMPDQANFQLAGLPLGGHDSVT  468
             AQAAAVGLS++KLFIADTQGRLYSADRSAFE++DP+LKLMP+QANFQL G+PLGGH+ VT
Sbjct  488   AQAAAVGLSGDKLFIADTQGRLYSADRSAFEGDDPKLKLMPEQANFQLEGVPLGGHNRVT  547

Query  469   GFINGDDGRVHALIKNRQGEIHSHALNEQDSKLESGWNLTNALVLSNNRGLTMPPAPTAA  528
             GFINGDDG VHALIKNRQGE HSHAL+EQ SKL+SGWNLTNALVL+NNRGLTMPP+PTAA
Sbjct  548   GFINGDDGGVHALIKNRQGETHSHALDEQSSKLQSGWNLTNALVLNNNRGLTMPPPPTAA  607

Query  529   DRLNLDRAGLVGLSEGRIQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGGKLHALKV  588
             DRLNLDRAGLVGLSEGRIQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGGKLHALK+
Sbjct  608   DRLNLDRAGLVGLSEGRIQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGGKLHALKI  667

Query  589   TPEHPNMAFDHNTALAQTARSTTVEMGKEIEGLDDRVITAFAMVSNKRFVALDDQNKLTA  648
             ++EHPNMAFD+NTALAQTARST VEMGKEIEGLDDRVI AFAMVSNKRFVALDDQNKLTA
Sbjct  668   AAEHPNMAFDRNTALAQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKRFVALDDQNKLTA  727

Query  649   HSKDHKPVTLDIPGLEGDIKSLALDEKHNLHALTSTGGLYCLPREAWQSTKLGDQMRARW  708
             HSKDHKPVTLDIPGLEGDIKSL+LDEKHNLHALTSTGGLYCLP+EAWQSTKLGDQ+RARW
Sbjct  728   HSKDHKPVTLDIPGLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQSTKLGDQLRARW  787

Query  709   TPVALPGGQPVKALFANDDNVLSAQIEDAEGQGLMRLSAGKWQAFEQRPVEENGLNDVHS  768
             TPVALPGGQPVKALF+NDDNVLSAQIEDAEG+GLM+L AG+WQ FEQRPVEENGLNDVHS
Sbjct  788   TPVALPGGQPVKALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQRPVEENGLNDVHS  847

Query  769   RITGSNKTWRIPKTGLTLRMDINAFGRSGVEKSKKASTREFMRANVYKNTAEVPRWMKNV  828
             RITGSNKTWRIPKTGLTLRMD+N+FGRSGVEKSKKAST EF+RAN+YKNTAE PRWMKNV
Sbjct  848   RITGSNKTWRIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYKNTAETPRWMKNV  907

Query  829   GNNIQHRHHGRLGLNEVYETESMLFKQLELIHESGGRPPAPGKDLKARIAALESKLGPQG  888
             G++IQHR +GRLGL+EVYETESMLFKQLELIHESGGRPPA G+DLKARI+ALE+KLGPQG
Sbjct  908   GDHIQHRYQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKARITALEAKLGPQG  967

Query  889   ATLVKELETLREELENHSYTALMSIGQSYGKVKNLRQQDGILNQHGELAKPSVRTQFGKK  948
             ATLVKELETLR+ELENHSYTALMSIGQSYGK KNL+QQDGILNQHGELAKPSVR QFGKK
Sbjct  968   ATLVKELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGELAKPSVRMQFGKK  1027

Query  949   LAELGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKYQGLKLSHQKADVPLG  1008
             LA+LGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLK QGLKLSHQKAD+PLG
Sbjct  1028  LADLGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGLKLSHQKADIPLG  1087

Query  1009  QRRDASEEHGLSKARLALDLVTLKSLGALLDEVEQLPPQADIDPLQNKLARLRDVTYGEN  1068
             QRRDASE+HGLSKARLALDLVTLKSLGALLD+VEQLPPQ+DI+PLQ+KLA LRDVTYGEN
Sbjct  1088  QRRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKKLATLRDVTYGEN  1147

Query  1069  PVKVVTDMGFTDNKALESGYEAVKTFLKSFKKADHAVSVNMRAATGSKDQAELAGKFKSM  1128
             PVKVVTDMGFTDNKALESGYE+VKTFLKSFKKADHAVSVNMRAATGSKDQAELAGKFKSM
Sbjct  1148  PVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSKDQAELAGKFKSM  1207

Query  1129  LKQLEHGDDEIRLQRSYGLNLTTPFIILADNATGLWPTAGTTGNRNYILNAERCEGGVTL  1188
             LKQLEHGDDE+ LQRSYG+NLTTPFIILAD+ATGLWPTAG+TGNRNYILNAERCEGGVTL
Sbjct  1208  LKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYILNAERCEGGVTL  1267

Query  1189  YLISEgagnvsggfgagKDYWPGFFDENHPARSVDVGNNRTLTPNFRLGVDVTATVAASQ  1248
             YLISEGAGNVSGGFGAGKDYWPGFFD N+PARSVDVGNNRTLTPNFRLGVDVTATVAASQ
Sbjct  1268  YLISEGAGNVSGGFGAGKDYWPGFFDANNPARSVDVGNNRTLTPNFRLGVDVTATVAASQ  1327

Query  1249  RAGVVFNVPDEDIDAFIDDLFEGKLNPLQVLKKAVDHETYQARRFNFDLTAGGTADLRAG  1308
             RAGVVFNVPDEDIDAF+DDLFEG+LNPLQVLKKAVDHE+Y+ARRFNFDLTAGGTAD+RAG
Sbjct  1328  RAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFDLTAGGTADIRAG  1387

Query  1309  INLTEDRDPDADPNSDSFSAVVRGGFAANITVNLMTYTDNSLTQKNDKTKLREGGKNRPR  1368
             INLTEDRDP+ADPNSDSFSAVVRGGFAANITVNLMTYTD SLTQKNDKT L+EGGKNRPR
Sbjct  1388  INLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDKTELKEGGKNRPR  1447

Query  1369  FLNNATLGGQLRGQIggtrtaptgtpasapgptlaSQSAANNLGVAVNFSVENRTVKRVK  1428
             FLNN T GGQLR+QIGG++TAPTGTPASAPGPT ASQ+AANNLG A+NFSVENRTVKR+K
Sbjct  1448  FLNNVTAGGQLRAQIGGSHTAPTGTPASAPGPTPASQTAANNLGGALNFSVENRTVKRIK  1507

Query  1429  FRYNVAKPITTEGLGKLSKSLGEAFKDSTTKAKLAELADPLNARYAGKKPDEVIQAHLDG  1488
             FRYNVAKPITTEGL+KLSK+LGEAF D+TTKAKLAELADPLNARY+GKKPDEVIQA+LDG
Sbjct  1508  FRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARYTGKKPDEVIQAQLDG  1567

Query  1489  LEELFAD--TQWQNDKQYKALRGLKRGAVEHRASVNKHSVMDNARFETSKTNLSGLSSES  1546
             LEELFAD     +NDKQYKALR+LKR+AVEHRAS NKHSVMDNARFETSKTNLSGLSSES
Sbjct  1568  LEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDNARFETSKTNLSGLSSES  1627

Query  1547  ILTKIMGSVREASAPGNAARVAEFMRQDPKLRAMLKDMEGSIGTLARVRLEPKDSLVDKI  1606
             ILTKIM+SVR+ASAPGNA+RVAEFMRQDPKLRAMLK+MEGSIGTLARVRLEPKDSLVDKI
Sbjct  1628  ILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGSIGTLARVRLEPKDSLVDKI  1687

Query  1607  DEGSLDGTMTQSDLSALLRDRNQMRIKRLVVFHTATQAENFTSPTPLVSYNSGANMSVTK  1666
             DEGSL+GTMTQSDLS++L DRN+MRIKRLVVFHTATQAENFTSPTPLVSYNSGAN+SVTK
Sbjct  1688  DEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAENFTSPTPLVSYNSGANVSVTK  1747

Query  1667  TLGRINFIYGADQDKPIGYTFDGELSRPSASLKEAASKLKQEGFELKS  1714
             TLGRINF+YGADQDKPIGYTFDGELSRPSASLKEAA+ LK+EGFELKS
Sbjct  1748  TLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAGDLKKEGFELKS  1795


 Score =  108 bits (392),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 80/164 (49%), Positives = 124/164 (76%), Gaps = 8/164 (4%)

Query  1    MHSSSIHRNTGCIIQppapantnaatDLQQKIEQPKQRSSHSLSSVGKRALKNVSKLFQK  60
            M+S+SIHRNTG IIQP   +++ AATDLQ++ EQP+QRSSHSLSSVGKRALK+V+KLFQK
Sbjct  1    MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLSSVGKRALKSVGKLFQK  60

Query  61   SKAPQQKAATPPTVKNVKPSQPTPNAKTAKDKAPVsqlssnslddlddTRQPVTRAGHSG  120
            SKAPQQKAATPPT KNVK + P++N  T+++KA  S +S++S ++ + + + + R   + 
Sbjct  61   SKAPQQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSSPQNTHRAPKWILRNHPNQ  120

Query  121  ASTCGTKAQDPDEPATLQSSRQSMMTRSNGGRFELKDEKLVRNS  164
            AS+ G+++++ +  A+   +R+++       RF+L +++L R++
Sbjct  121  ASSSGAQTHEIHPEAA---PRKNLRV-----RFDLPQDRLERSP  156

3) AvrE1 in NC_007005


> AF232004|36|G35|8037792|AAF71499.1|Pseudomonas_syringae_pv._tomato_DC3000|+|34461..39848|avrE|-|AvrE
Length=1795

 Score = 2022 bits (7681),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1215/1800 (68%), Positives = 1565/1800 (87%), Gaps = 19/1800 (1%)

Query  1     MQAPTVNRNTGNVIAPEATARADNPSNIRQQTEQPTQRSSHSLGSMGKRLLKSVGKVFQK  60
             MQ+P+++RNTG++I P  T+ A  ++++++++EQP QRSSHSL+S+GKR LKSVGK+FQK
Sbjct  1     MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLSSVGKRALKSVGKLFQK  60

Query  61    SRAPRqsaarppstqppssspprssREAGRNTSRDTRLpdnppprndpppKSILRTRAN-  119
             S+AP+Q AA PP+++   ++PP S+  + RN +R++ +++++P   + +PK ILR ++N 
Sbjct  61    SKAPQQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSSPQNTHRAPKWILRNHPNQ  120

Query  120   --TSGTTKHEIEQGSTRADTAPRNNRRVTFNLPQDQLTRSASEQLAAEPMTDEEAVASAM  177
               +SG+  HEI     ++++APR+N RV F+LPQD+L RS+S   + +PMTDEEAVA+A 
Sbjct  121   ASSSGAQTHEI-----HPEAAPRKNLRVRFDLPQDRLERSPSYLDSDNPMTDEEAVANAT  175

Query  178   RERRNPGGRLQGPDGTRQSMQPVDPNTASSSGTQADDPDGPLARRNtglesstggsselr  237
             R+ R+P+++LQG+DGTR SM + DP+ +SSSG++ +D+DGP++ R+  L  S GG  EL+
Sbjct  176   RQFRSPDSHLQGSDGTRISMLATDPDQPSSSGSKIGDSDGPIPPREPMLWRSNGGRFELK  235

Query  238   seQLIRDTRPQATIRLSADGKPDFSSFKTPGMAALLNDILAKPGQTYLAQQSEQGVQDHQ  297
              E+L+R++ PQ++I+L A GKPDFS+F+TPG+A+LL+ ILA P QTYLA+QS +GV++HQ
Sbjct  236   DEKLVRNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILATPKQTYLAHQSKDGVHGHQ  295

Query  298   LLQANGHLLHLAQGDSSLAVIRSSEPTLPVAGGKPPPVNMQREENHIHLDTLDGRRSQEL  357
             LLQANGH+LHLAQ+DSSLAVIRSS+ +L + G KPP+V+M+RE+ +IH+DT  GR++QEL
Sbjct  296   LLQANGHFLHLAQDDSSLAVIRSSNEALLIEGKKPPAVKMEREDGNIHIDTASGRKTQEL  355

Query  358   PGKAHIAHLTDVHQTTNGDRLRVHEDRLYQFEPLAARWKPVDEIEDIAFNRLITGGNGSV  417
             PGKAHIAH+T+V  + +G+R+RVHEDRLYQF+P+++RWK  + +ED AFN L TGGNGSV
Sbjct  356   PGKAHIAHITNVLLSHDGERMRVHEDRLYQFDPISTRWKIPEGLEDTAFNSLSTGGNGSV  415

Query  418   YAKSDDVVVDLSSPFMPHADFNDLKSFSVAPDDTAALLSGSDVQTVLLTDMSPVIGGLTP  477
             YAKSDD VVDLSSPFMPH + +DL+SFSVAPD+ AALLSG   Q++LLTDMSPVIGGLTP
Sbjct  416   YAKSDDAVVDLSSPFMPHVEVEDLQSFSVAPDNRAALLSGKTTQAILLTDMSPVIGGLTP  475

Query  478   KKTKTLELDGGQAQAAEVALSNDRLFIADTQGRLYSTDRSAFESNEPTLRLMPERAGYRL  537
             KKTK LELDGG+AQAA V+LS D+LFIADTQGRLYS+DRSAFE+++P L+LMPE+A ++L
Sbjct  476   KKTKGLELDGGKAQAAAVGLSGDKLFIADTQGRLYSADRSAFEGDDPKLKLMPEQANFQL  535

Query  538   DDQPMGGHNSVSGFISGDDGRVHALIRNRQGEVHSHALDEQGAKLESGWNLTNALVLDNT  597
             ++ P+GGHN V+GFI+GDDG VHALI+NRQGE HSHALDEQ++KL+SGWNLTNALVL+N 
Sbjct  536   EGVPLGGHNRVTGFINGDDGGVHALIKNRQGETHSHALDEQSSKLQSGWNLTNALVLNNN  595

Query  598   RGLTVMPAPVGADRLHLDRAGLVGLNAGRIQRWDATPQCWKDAGIKDVDRLQRGADSNAY  657
             RGLT+ P+P +ADRL+LDRAGLVGL+ GRIQRWDATP+CWKDAGIKD+DRLQRGADSNAY
Sbjct  596   RGLTMPPPPTAADRLNLDRAGLVGLSEGRIQRWDATPECWKDAGIKDIDRLQRGADSNAY  655

Query  658   VLKGGKLLRLDVAPKHPNVAFDHNTALAQIARSTKVAMGKEIAGLENRVVTAFAMVSDKR  717
             VLKGGKL  L +A+ HPN+AFD+NTALAQ ARSTKV MGKEI GL++RV+ AFAMVS+KR
Sbjct  656   VLKGGKLHALKIAAEHPNMAFDRNTALAQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKR  715

Query  718   FVALDDQNRLTAHSKDHKPIDLDTSAIDGDIKDLALDEKHNLYTLSSTGKLYCMPREAWQ  777
             FVALDDQN+LTAHSKDHKP+ LD ++++GDIK L+LDEKHNL +L+STG LYC+P+EAWQ
Sbjct  716   FVALDDQNKLTAHSKDHKPVTLDIPGLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQ  775

Query  778   ATRFGGQLAAKWTPLAAPDGQPVKALYSNDDNRLSVQVEDAAGQGLMQLKEGQWQAFEQR  837
             +T++G+QL A+WTP+A P+GQPVKAL++NDDN LS Q+EDA G+GLMQLK GQWQ FEQR
Sbjct  776   STKLGDQLRARWTPVALPGGQPVKALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQR  835

Query  838   PVEKNGLNDVYNRITRAHKTWRIPGTGLTANLDINAFGRSGMEKSNRPTASEAIRANVYK  897
             PVE NGLNDV +RIT ++KTWRIP TGLT  +D+N+FGRSG+EKS+++++SE IRAN+YK
Sbjct  836   PVEENGLNDVHSRITGSNKTWRIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYK  895

Query  898   HTLEPPRWMKNVGNNIQHRYHGREGLKELYKKELIAFKQLELVHEAAGAPPTPGNDLKAR  957
             +T E PRWMKNVG++IQHRY+GR GLKE+Y  E + FKQLEL+HE++G PP+ G+DLKAR
Sbjct  896   NTAETPRWMKNVGDHIQHRYQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKAR  955

Query  958   IARLQ--LGPEGAELAKELEVFRDELEKHARTALENIGKDYGKLKNLKQNDGVLNQHSAL  1015
             I+ L+  LGP+GA L KELE +RDELE+H+ TAL +IG+ YGK KNLKQ+DG+LNQH+ L
Sbjct  956   ITALEAKLGPQGATLVKELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGEL  1015

Query  1016  AKPSKRTQLGKKLAELGSILNFKSSGHDFVKELDDALTRIAPSAENPTARTLKLLKDNGV  1075
             AKPS R Q+GKKLA+LG+ LNFKSSGHD+VKEL+DALT++APSAENPT + L  LK++G+
Sbjct  1016  AKPSVRMQFGKKLADLGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGL  1075

Query  1076  KLSHTKTDIGLGQRRDANEDHGLSKARLALDLVTLNDLGALIGKVELLARSSDLPRLQAE  1135
             KLSH K+DI LGQRRDA+EDHGLSKARLALDLVTL+ LGAL+++VE L+  SD+  LQ  
Sbjct  1076  KLSHQKADIPLGQRRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKK  1135

Query  1136  LTSLRDVTYGENPVKQVTDMGFTDNAALEGAYDAVKAFSNALKKSDHAVSVNMRAATGSQ  1195
             L++LRDVTYGENPVK VTDMGFTDN ALE++Y++VK+F +++KK+DHAVSVNMRAATGS+
Sbjct  1136  LATLRDVTYGENPVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSK  1195

Query  1196  NQSELADTLKAMLKNLEHGDDEIGVQRSYGLNLTSPWVVLADKSTGPWPNAGATGNRNYL  1255
             +Q+ELA+ +K+MLK+LEHGDDE+G+QRSYG+NLT+P ++LADK+TG WP AGATGNRNY+
Sbjct  1196  DQAELAGKFKSMLKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYI  1255

Query  1256  FSAERCEGGVTLYLTREaagnvnggvgggKDYWPGFFDENHPARSVDIGNNRKMTPNFRL  1315
             ++AERCEGGVTLYL  E+AGNV+GG G+GKDYWPGFFD N+PARSVD+GNNR +TPNFRL
Sbjct  1256  LNAERCEGGVTLYLISEGAGNVSGGFGAGKDYWPGFFDANNPARSVDVGNNRTLTPNFRL  1315

Query  1316  GADVTATAAASQRAGVIFNVADDEIDGFVDDLFEGKLNPLQLLNKVKDHETYEARRFNFD  1375
             G DVTAT AASQRAGV+FNV+D++ID+FVDDLFEG+LNPLQ+L+K  DHE+YEARRFNFD
Sbjct  1316  GVDVTATVAASQRAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFD  1375

Query  1376  ITTGFSADMRVGFGLSE-------ADSAPLSAVARLGVAANVTVNLLSYTDYSLTQKNDK  1428
             +T+G +AD+R G+ L+E       ++S ++SAV R G AAN+TVNL++YTDYSLTQKNDK
Sbjct  1376  LTAGGTADIRAGINLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDK  1435

Query  1429  TELRDGGKNRPRFFNSLIFGGQARGQISGthsnstatptsaagptpatqsaaNNLGVAAN  1488
             TEL++GGKNRPRF+N++  GGQ R+QI+G+H+ +T+TP+SA+GPTPA+Q+AANNLG A N
Sbjct  1436  TELKEGGKNRPRFLNNVTAGGQLRAQIGGSHTAPTGTPASAPGPTPASQTAANNLGGALN  1495

Query  1489  VTIDDKTVKRVKFRFNVATPMTTESLDKLSKSLGAAFKDKATTARLAELQNPLNALYVDM  1548
              +++++TVKR+KFR+NVA P+TTE+L KLSK+LG AF D++T A+LAEL +PLNA Y + 
Sbjct  1496  FSVENRTVKRIKFRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARYTGK  1555

Query  1549  NPEQAIQARLDGLKALFAE--RPSQNDTQYKALRDLKRAGVQHEASINNHSVLDNARFET  1606
             +P++ IQA+LDGL  LFA+   P +ND QYKALRDLKRA+V+H AS N+HSV+DNARFET
Sbjct  1556  KPDEVIQAQLDGLEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDNARFET  1615

Query  1607  SKTSLSGLSKESILTRIMGSLRDASAPGNAARVAEYMRQDPTLSAMVKQLENSQGTLARI  1666
             SKT+LSGLS ESILT+IM+S+RDASAPGNA+RVAE+MRQDP L AM+K++E S GTLAR+
Sbjct  1616  SKTNLSGLSSESILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGSIGTLARV  1675

Query  1667  RLEPKDSLIDEIDEGSRRGTLTQTELSGLLENRNNMRIKRLVVFHTPRQTENFTSPTPLI  1726
             RLEPKDSL+D IDEGS  GT+TQ++LS++LE+RN+MRIKRLVVFHT+ Q+ENFTSPTPL+
Sbjct  1676  RLEPKDSLVDKIDEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAENFTSPTPLV  1735

Query  1727  SYNSGASLSVNKPLGRINFIYGEDQDKPIGYTFDGELSRPSASLKEAAGELKLSGFEVKS  1786
             SYNSGA++SV K LGRINF+YG DQDKPIGYTFDGELSRPSASLKEAAG+LK  GFE+KS
Sbjct  1736  SYNSGANVSVTKTLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAGDLKKEGFELKS  1795