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Homologs of RL029 gene of AY273869

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PA14_59870
( YP_792975.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

5e-28

100

2) PSPA7_4508
( YP_001349858.1 )

hypothetical protein

NC_009656
(Pseudomonas aeruginosa PA7)

2e-27

3) Pecwa_1633
( YP_003259030.1 )

hypothetical protein

NC_013421
(Pectobacterium wasabiae WPP163)

2e-09

4) XCV2374
( YP_364105.1 )

hypothetical protein

NC_007508
(Xanthomonas campestris 85-10)

7e-09

5) Bpet4272
( YP_001632888.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

1e-08

6) Daci_4172
( YP_001565188.1 )

hypothetical protein

NC_010002
(Delftia acidovorans SPH-1)

1e-08

7) Ajs_1405
( YP_985696.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

3e-08

8) PSTAA_1256
( YP_005937908.1 )

hypothetical protein

NC_017532
(Pseudomonas stutzeri DSM 4166)

5e-08

9) PSTAB_2480
( YP_004714850.1 )

hypothetical protein

NC_015740
(Pseudomonas stutzeri ATCC 17588)

5e-06

10) DSC_04115
( YP_004929517.1 )

hypothetical protein

NC_016147
(Pseudoxanthomonas spadix BD-a59)

5e-05

11) PPS_2348
( YP_004701789.1 )

hypothetical protein

NC_015733
(Pseudomonas putida S16)

0.035

12) ECA0565
( YP_048681.1 )

hypothetical protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

0.10

13) Bpet1074
( YP_001629677.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

0.37

14) Dtpsy_1171
( YP_002552643.1 )

hypothetical protein

NC_011992
(Acidovorax ebreus TPSY)

0.49

• Sequence Alignments

1) PA14_59870 in NC_008463


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score =  117 bits (426),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 79/79 (100%), Positives = 79/79 (100%), Gaps = 0/79 (0%)

Query  1   MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAG  60
           MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAG
Sbjct  1   MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAG  60

Query  61  ASAIRILVLLGITSFFLLS  79
           ASAIRILVLLGITSFFLLS
Sbjct  61  ASAIRILVLLGITSFFLLS  79

2) PSPA7_4508 in NC_009656


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 78/79 (99%), Positives = 79/79 (100%), Gaps = 0/79 (0%)

Query  1   MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAG  60
           MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAG
Sbjct  1   MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAG  60

Query  61  ASAIRILVLLGITSFILLS  79
           ASAIRILVLLGITSF+LLS
Sbjct  61  ASAIRILVLLGITSFFLLS  79

3) Pecwa_1633 in NC_013421


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 55.5 bits (191),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 53/77 (69%), Gaps = 0/77 (0%)

Query  1   MTAAQISAFQTNSGITPAAMSAVFIGVVFAVLLLWGAWAIRTAYVGWAENQLNQRQFLSV  60
           M++AQ SAFQ+ +G+ P+A  ++FIG   + LLLW+AWA+ ++  GWA N+L+     + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  IVRFIAMYLVLTFFLLS  77
            +R++ +  + +FFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

4) XCV2374 in NC_007508


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 53.4 bits (183),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 32/77 (42%), Positives = 51/77 (67%), Gaps = 0/77 (0%)

Query  1   MNGAQISAFQANSGIAPSAMATVLIGVVFAVLLVWGVWAIRTAYVGWAENRLNQRQFLGV  60
           M+GAQ SAFQA +G++PSA   ++IG   + LL+W+ WA+ ++  GWA N L+     + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  VVRFLAMYLVLTFFLLS  77
            +R+L +  + +FFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

5) Bpet4272 in NC_010170


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 52.4 bits (179),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 51/77 (67%), Gaps = 0/77 (0%)

Query  1   MNGAQVSAFQANSGIAPSAMATVLVGIVFAVLLVWGVWAIRTAYVGWAENRLNQRQFLGV  60
           M+GAQ SAFQA +G++PSA   +++G   + LL+W+ WA+ ++  GWA N L+     + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  CIRFVAMYLVMTFFLLS  77
            IR++ +  + +FFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

6) Daci_4172 in NC_010002


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 52.4 bits (179),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 51/77 (67%), Gaps = 0/77 (0%)

Query  1   MNGAQVSAFQANSGIAPSAMATVLVGIVFAVLLVWGVWAIRTAYVGWAENRLNQRQFLGV  60
           M+GAQ SAFQA +G++PSA   +++G   + LL+W+ WA+ ++  GWA N L+     + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  CIRFVAMYLVMTFFLLS  77
            IR++ +  + +FFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

7) Ajs_1405 in NC_008782


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 51.6 bits (176),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 51/77 (67%), Gaps = 0/77 (0%)

Query  1   MNGAQISAFQANSGIAPSAMATVLIGVVFAVLLVWGVWAIRTAYVGWSESRLNQRQFLGV  60
           M+GAQ SAFQA +G++PSA   ++IG   + LL+W+ WA+ ++  GW+ + L+     + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  CIRFVAMYLVLSFFLLS  77
            IR++ +  + SFFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

8) PSTAA_1256 in NC_017532


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 50.8 bits (173),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 50/77 (65%), Gaps = 0/77 (0%)

Query  1   MNGAQVSAFQANSGIAPSAMATVLVGIVFAVLLAWGVWAIRTAYVGWAENRLNQRQFLGV  60
           M+GAQ SAFQA +G++PSA   +++G   + LL W+ WA+ ++  GWA N L+     + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  CIRFVAMYLVMTFFLLS  77
            IR++ +  + +FFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

9) PSTAB_2480 in NC_015740


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 44.0 bits (147),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 32/77 (42%), Positives = 49/77 (64%), Gaps = 0/77 (0%)

Query  1   MNAAQTAAFQANSGITPSVMSTMLLGAVFAVLLVWGVWAMRSAYVGWAEAQLSQRQFlvv  60
           M++AQT+AFQA +G+ PS    +++GA  + LL+W+ WAM S+  GWA  +L        
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  vvrfavlylvlTFFLLS  77
            +R+ VL  + +FFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

10) DSC_04115 in NC_016147


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 40.8 bits (135),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 33/77 (43%), Positives = 51/77 (67%), Gaps = 0/77 (0%)

Query  1   MNAAQTAAFQANGGFPPsavsvvvigavfavllvWGVWAMRTAYVGWAEQRISQRQFLGV  60
           M++AQT+AFQA +GFPPSA   + IGA  + LL+W+ WAM ++  GWA + +      + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  VVRFVALYLVLTFFLLS  77
            +R++ L  + +FFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

11) PPS_2348 in NC_015733


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 31.1 bits (98),  Expect = 0.035, Method: Compositional matrix adjust.
 Identities = 32/79 (41%), Positives = 55/79 (70%), Gaps = 0/79 (0%)

Query  1   MSMTDAQLSAFSAVAGFSPQlssvlwrssvlllallwctwalwtGYRGWAAGNINFGSLG  60
           MSM++AQ SAF A AGF+P  +  L  ++ + + LLW +WA+ +  RGWA+ N++ ++ G
Sbjct  1   MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAG  60

Query  61  GSTLRLALALIVLMFFMLS  79
           +S++R+ + L +  FF+LS
Sbjct  61  ASAIRILVLLGITSFFLLS  79

12) ECA0565 in NC_004547


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 29.5 bits (92),  Expect = 0.10, Method: Compositional matrix adjust.
 Identities = 30/73 (42%), Positives = 50/73 (69%), Gaps = 0/73 (0%)

Query  1   MSMTAAQSSAFKSASGLDPQILSLICIGfllaslflwaawalGDVWNGWANEKVRDAAMG  60
           MSM++AQ+SAF++A+G+ P     + IG  ++ L+LW+AWA+   W GWA +++  A+ G
Sbjct  1   MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAG  60

Query  61  RFALRTAILLVIS  73
             A+R  +LL I+
Sbjct  61  ASAIRILVLLGIT  73

13) Bpet1074 in NC_010170


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 27.7 bits (85),  Expect = 0.37, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 52/77 (68%), Gaps = 0/77 (0%)

Query  1   MNGAQVSAFQANSGIAPSAMATvlvgavfavllvwgvwaIRTAYVGWAESRLNQRQFLGV  60
           M+GAQ SAFQA +G++PSA   +++GA  + LL+W+ WA+ ++  GWA + L+     + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  CIRFIAMYLVLTFFLLS  77
            IR++ +  + +FFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79

14) Dtpsy_1171 in NC_011992


> AY273869|36|G29|32481642|AAP84156.1|Pseudomonas_aeruginosa_PA14|-|27356..27595|-|RL029|putative 
pathogenesis-related protein
Length=79

 Score = 27.4 bits (84),  Expect = 0.49, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 52/77 (68%), Gaps = 0/77 (0%)

Query  1   MNGAQVSAFQANSGIAPSAMATvlvgavfavllvwgvwaIRTAYVGWSESRLNQRQFLGV  60
           M+GAQ SAFQA +G++PSA   +++GA  + LL+W+ WA+ ++  GW+ + L+     + 
Sbjct  3   MSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGAS  62

Query  61  CIRFVAMYLVLSFFLLS  77
            IR++ +  + SFFLLS
Sbjct  63  AIRILVLLGITSFFLLS  79