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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AF232004

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PSPTO_1410
( NP_791236.1 )

exchangeable effector locus protein

NC_004578
(Pseudomonas syringae DC3000)

2e-40

100

2) PSPPH_1297
( YP_273556.1 )

serine-aspartate repeat-containing protein

NC_005773
(Pseudomonas syringae 1448A)

2e-26

• Sequence Alignments

1) PSPTO_1410 in NC_004578


> AF232004|4|G3|8037774|AAF71485.1|Pseudomonas_syringae_pv._tomato_DC3000|-|2908..3324|-|-|unknown
Length=138

 Score =  158 bits (582),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 138/138 (100%), Positives = 138/138 (100%), Gaps = 0/138 (0%)

Query  1    MRAYKNLTAKIGGFLLALTIIGTSLPAFAVNDCDLDNDNSTGATCGGNDKDLDNDNVTDA  60
            MRAYKNLTAKIGGFLLALTIIGTSLPAFAVNDCDLDNDNSTGATCGGNDKDLDNDNVTDA
Sbjct  1    MRAYKNLTAKIGGFLLALTIIGTSLPAFAVNDCDLDNDNSTGATCGGNDKDLDNDNVTDA  60

Query  61   AFGGNDKDMDNDHHTDAAFGGNDKDLDNDHHTDAAFGGndkdldndnktdAAFGGndrdl  120
            AFGGNDKDMDNDHHTDAAFGGNDKDLDNDHHTDAAFGGNDKDLDNDNKTDAAFGGNDRDL
Sbjct  61   AFGGNDKDMDNDHHTDAAFGGNDKDLDNDHHTDAAFGGNDKDLDNDNKTDAAFGGNDRDL  120

Query  121  dndnntdnynGTPSAAKK  138
            DNDNNTDNYNGTPSAAKK
Sbjct  121  DNDNNTDNYNGTPSAAKK  138

2) PSPPH_1297 in NC_005773


> AF232004|4|G3|8037774|AAF71485.1|Pseudomonas_syringae_pv._tomato_DC3000|-|2908..3324|-|-|unknown
Length=138

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 85/98 (87%), Positives = 93/98 (95%), Gaps = 0/98 (0%)

Query  1   MRVYNALTAKIgglllvltmvgtslPAYAVNDCDMDNDNSTDARCGGNDKDLDNDNVTDA  60
           MR Y+ LTAKIGG+LL LT++GTSLPA+AVNDCD+DNDNST+A CGGNDKDLDNDNVTDA
Sbjct  1   MRAYKNLTAKIGGFLLALTIIGTSLPAFAVNDCDLDNDNSTGATCGGNDKDLDNDNVTDA  60

Query  61  AFGGNDKDMDNDHHTDAAFGGTDKDLDNDNHTDAAFGG  98
           AFGGNDKDMDNDHHTDAAFGG DKDLDND+HTDAAFGG
Sbjct  61  AFGGNDKDMDNDHHTDAAFGGNDKDLDNDHHTDAAFGG  98