Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of tcaR2 gene of AJ920332

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YE105_C3508
( YP_004299705.1 )

LysR family transcriptional regulator

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-119

100

2) YpsIP31758_0417
( YP_001399410.1 )

LysR family transcriptional regulator

NC_009708
(Yersinia pseudotuberculosis IP 31758)

6e-77

3) YPTS_3736
( YP_001874146.1 )

LysR family transcriptional regulator

NC_010634
(Yersinia pseudotuberculosis PB1/+)

2e-71

4) lysR23
( NP_995130.1 )

LysR family transcriptional regulator

NC_005810
(Yersinia pestis 91001)

6e-71

5) y0181
( NP_667524.1 )

transcriptional regulator

NC_004088
(Yersinia pestis KIM)

6e-71

6) A1122_07840
( YP_005521241.1 )

LysR family transcriptional regulator

NC_017168
(Yersinia pestis A1122)

7e-71

7) YpAngola_A1179
( YP_001605722.1 )

LysR family transcriptional regulator

NC_010159
(Yersinia pestis Angola)

7e-71

8) YPA_3695
( YP_653602.1 )

LysR family transcriptional regulator

NC_008150
(Yersinia pestis Antiqua)

7e-71

9) YPO3682
( YP_002348566.1 )

LysR family transcriptional regulator

NC_003143
(Yersinia pestis CO92)

7e-71

10) yitR
( YP_005626008.1 )

putative lysR-family transcriptional regulatory protein

NC_017265
(Yersinia pestis Harbin 35)

7e-71

11) YPN_3490
( YP_649417.1 )

LysR family transcriptional regulator

NC_008149
(Yersinia pestis Nepal516)

7e-71

12) YPDSF_0289
( YP_001161681.1 )

LysR family transcriptional regulator

NC_009381
(Yersinia pestis Pestoides F)

7e-71

13) YPTB3550
( YP_072032.1 )

LysR family transcriptional regulator

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-70

14) YPD4_3155
( YP_005506362.1 )

lysR-family transcriptional regulatory protein

NC_017154
(Yersinia pestis D106004)

4e-63

15) YPD8_3171
( YP_005510234.1 )

lysR-family transcriptional regulatory protein

NC_017160
(Yersinia pestis D182038)

4e-63

16) YPK_0481
( YP_001719237.1 )

LysR family transcriptional regulator

NC_010465
(Yersinia pseudotuberculosis YPIII)

4e-63

17) YPZ3_3166
( YP_003569337.1 )

lysR-family transcriptional regulatory protein

NC_014029
(Yersinia pestis Z176003)

8e-57

• Sequence Alignments

1) YE105_C3508 in NC_015224


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  422 bits (1588),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 288/288 (100%), Positives = 288/288 (100%), Gaps = 0/288 (0%)

Query  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60
            MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120
            RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180
            QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240
            NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  SSLyfdndidcdinyyiyfKSSVINKEFFINYVHENSPLSWREVNIDS  288
            SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVNIDS
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVNIDS  288

2) YpsIP31758_0417 in NC_009708


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  280 bits (1047),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 172/285 (61%), Positives = 226/285 (80%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAMKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQMNSLHAGVICDYFIKKGILNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T Q++S  AG +C+YF+  +  NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIDDVSQMDIVISTKEIKGYDFDVELTANCKTSLLYATYLNNLPNKKEYLKKLPFIQS  180
            +EN +D++Q+D+V+S KEIKGYDFD+ L A+CK+ LLYA+ LN LPNK E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  GIFCSSCCFNKFLHSLRQQGYSGNILHVDDPRVRHDLIRKGAGLSLSKNYSIDNRGMNHS  240
             IF SSCCF++F++ L+  GYS +ILH+DD  +R++LI KGAGLS++ N       + + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISILSDISFNITYYIYFKSSVINKEFFIQHIMKNSLLKWQETA  285
            + + + +DI  +I YYIYFKSSVINKEFFI+ +  NS L W+E  
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

3) YPTS_3736 in NC_010634


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  261 bits (977),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 158/267 (60%), Positives = 212/267 (80%), Gaps = 0/267 (0%)

Query  1    MTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTLEGAAFYQEIYPTYVRLTE  60
            +T+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT  G AFY++IYPTY RL +
Sbjct  19   LTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTDRGEAFYKDIYPTYARLID  78

Query  61   itknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIELRENIGDISQMDIVISTKE  120
            +   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL+EN  DI+Q+D+V+S KE
Sbjct  79   LGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIELQENTNDINQLDVVMSIKE  138

Query  121  IKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQSSVFCSSCCFKRFSHNLIQ  180
            IKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS++F SSCCFKRF ++L  
Sbjct  139  IKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQSNIFSSSCCFKRFFDHLKL  198

Query  181  QGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHSTEISFISDINLDITYYIY  240
             GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + + + F +DI+ DI YYIY
Sbjct  199  SGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNISSLYFDNDIDCDINYYIY  258

Query  241  FKSSVINKEFFIQYITNNSLLQWQKAE  267
            FKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  259  FKSSVINKEFFINYVHENSPLSWREVN  285

4) lysR23 in NC_005810


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (971),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  4    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  63
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  64   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  123
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  124  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  183
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  184  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  243
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  244  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  288
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

5) y0181 in NC_004088


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (971),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  4    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  63
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  64   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  123
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  124  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  183
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  184  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  243
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  244  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  288
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

6) A1122_07840 in NC_017168


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (970),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  180
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  240
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  285
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

7) YpAngola_A1179 in NC_010159


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (970),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  180
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  240
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  285
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

8) YPA_3695 in NC_008150


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (970),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  180
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  240
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  285
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

9) yitR in NC_017265


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (970),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  180
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  240
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  285
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

10) YPO3682 in NC_003143


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (970),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  180
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  240
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  285
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

11) YPN_3490 in NC_008149


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (970),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  180
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  240
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  285
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

12) YPDSF_0289 in NC_009381


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  260 bits (970),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 230/285 (81%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  180
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  sifcssccfkrfsHNLIQQGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  240
            +IF SSCCFKRF ++L   GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISFISDINFDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  285
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

13) YPTB3550 in NC_006155


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  258 bits (964),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 177/285 (63%), Positives = 229/285 (81%), Gaps = 0/285 (0%)

Query  1    MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTL  60
            MFISKNLLVF+TTVQEGSLT+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT 
Sbjct  1    MFISKNLLVFITTVQEGSLTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTD  60

Query  61   EGAAFYQEIYPTYVRLTEitknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIEL  120
             G AFY++IYPTY RL ++   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL
Sbjct  61   RGEAFYKDIYPTYARLIDLGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIEL  120

Query  121  RENIGDISQMDIVISTKEIKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQs  180
            +EN  DI+Q+D+V+S KEIKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS
Sbjct  121  QENTNDINQLDVVMSIKEIKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQS  180

Query  181  sifcssccfkrfsHNLIQQGYSGNALRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHS  240
            +IF SSCCFKRF ++L   GYS + L+IDD  +R+++I KGAG+S++ N +   + I + 
Sbjct  181  NIFSSSCCFKRFFDHLKLSGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNI  240

Query  241  TEISFISDINLDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAE  285
            + + F +DI+ DI YYIYFKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  241  SSLYFDNDIDCDINYYIYFKSSVINKEFFINYVHENSPLSWREVN  285

14) YPD4_3155 in NC_017154


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  234 bits (871),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 159/267 (60%), Positives = 212/267 (80%), Gaps = 0/267 (0%)

Query  1    MTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTLEGAAFYQEIYPTYVRLTE  60
            +T+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT  G AFY++IYPTY RL +
Sbjct  19   LTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTDRGEAFYKDIYPTYARLID  78

Query  61   itknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIELRENIGDISQMDIVISTKE  120
            +   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL+EN  DI+Q+D+V+S KE
Sbjct  79   LGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIELQENTNDINQLDVVMSIKE  138

Query  121  IKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQssifcssccfkrfsHNLIQ  180
            IKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS+IF SSCCFKRF ++L  
Sbjct  139  IKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQSNIFSSSCCFKRFFDHLKL  198

Query  181  QGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHSTEISFISDINFDITYYIY  240
             GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + + + F +DI+ DI YYIY
Sbjct  199  SGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNISSLYFDNDIDCDINYYIY  258

Query  241  FKSSVINKEFFIQYITNNSLLQWQKAE  267
            FKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  259  FKSSVINKEFFINYVHENSPLSWREVN  285

15) YPD8_3171 in NC_017160


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  234 bits (871),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 159/267 (60%), Positives = 212/267 (80%), Gaps = 0/267 (0%)

Query  1    MTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTLEGAAFYQEIYPTYVRLTE  60
            +T+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT  G AFY++IYPTY RL +
Sbjct  19   LTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTDRGEAFYKDIYPTYARLID  78

Query  61   itknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIELRENIGDISQMDIVISTKE  120
            +   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL+EN  DI+Q+D+V+S KE
Sbjct  79   LGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIELQENTNDINQLDVVMSIKE  138

Query  121  IKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQssifcssccfkrfsHNLIQ  180
            IKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS+IF SSCCFKRF ++L  
Sbjct  139  IKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQSNIFSSSCCFKRFFDHLKL  198

Query  181  QGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHSTEISFISDINFDITYYIY  240
             GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + + + F +DI+ DI YYIY
Sbjct  199  SGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNISSLYFDNDIDCDINYYIY  258

Query  241  FKSSVINKEFFIQYITNNSLLQWQKAE  267
            FKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  259  FKSSVINKEFFINYVHENSPLSWREVN  285

16) YPK_0481 in NC_010465


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  234 bits (871),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 159/267 (60%), Positives = 212/267 (80%), Gaps = 0/267 (0%)

Query  1    MTNAAVKLFTTPPPMSRSLKILEEELGFKLFTRTTSGLKLTLEGAAFYQEIYPTYVRLTE  60
            +T+AA+KLF+TPPPMSRS+KILE++LGFKLF+RTT+GLKLT  G AFY++IYPTY RL +
Sbjct  19   LTSAAIKLFSTPPPMSRSIKILEDNLGFKLFSRTTAGLKLTDRGEAFYKDIYPTYARLID  78

Query  61   itknykknkngiiniATYQLNSDHAGVICDYFIKKGNFNIELRENIGDISQMDIVISTKE  120
            +   YKK K+G INI+T QL+S  AG +C+YF+  +N+NIEL+EN  DI+Q+D+V+S KE
Sbjct  79   LGTRYKKGKSGTINIGTHQLKSKYAGFLCNYFLDSDNYNIELQENTNDINQLDVVMSIKE  138

Query  121  IKGYDFDTELTASCEIKLLYASHLNDLPDRVEYLKKLPFIQssifcssccfkrfsHNLIQ  180
            IKGYDFD  L ASC   LLYASHLN LP++ E LKKLPFIQS+IF SSCCFKRF ++L  
Sbjct  139  IKGYDFDIKLMASCKAILLYASHLNTLPNKDEHLKKLPFIQSNIFSSSCCFKRFFDHLKL  198

Query  181  QGYSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHSTEISFISDINFDITYYIY  240
             GYS ++L+IDD  +R+++I KGAG+S++ N +   + I + + + F +DI+ DI YYIY
Sbjct  199  SGYSEKILHIDDQDIRNNLIEKGAGLSIAVNGLNTINEIYNISSLYFDNDIDCDINYYIY  258

Query  241  FKSSVINKEFFIQYITNNSLLQWQKAE  267
            FKSSVINKEFFI+Y+ +NS L W+  +
Sbjct  259  FKSSVINKEFFINYVHENSPLSWREVN  285

17) YPZ3_3166 in NC_014029


> AJ920332|4|G4|83318557|CAI77371.1|Yersinia_enterocolitica_W22703|+|2112..2978|tcaR2|-|putative 
lysR-family transcriptional 
regulator
Length=288

 Score =  213 bits (791),  Expect = 8e-57, Method: Compositional matrix adjust.
 Identities = 149/253 (59%), Positives = 198/253 (79%), Gaps = 0/253 (0%)

Query  1    MSRSLKILEEELGFKLFTRTTSGLKLTLEGAAFYQEIYPTYVRLTEitknykknkngiin  60
            MSRS+KILE++LGFKLF+RTT+GLKLT  G AFY++IYPTY RL ++   YKK K+G IN
Sbjct  33   MSRSIKILEDNLGFKLFSRTTAGLKLTDRGEAFYKDIYPTYARLIDLGTRYKKGKSGTIN  92

Query  61   iATYQLNSDHAGVICDYFIKKGNFNIELRENIGDISQMDIVISTKEIKGYDFDTELTASC  120
            I+T QL+S  AG +C+YF+  +N+NIEL+EN  DI+Q+D+V+S KEIKGYDFD  L ASC
Sbjct  93   IGTHQLKSKYAGFLCNYFLDSDNYNIELQENTNDINQLDVVMSIKEIKGYDFDIKLMASC  152

Query  121  EIKLLYASHLNDLPDRVEYLKKLPFIQssifcssccfkrfsHNLIQQGYSGNVLRIDDAR  180
               LLYASHLN LP++ E LKKLPFIQS+IF SSCCFKRF ++L   GYS ++L+IDD  
Sbjct  153  KAILLYASHLNTLPNKDEHLKKLPFIQSNIFSSSCCFKRFFDHLKLSGYSEKILHIDDQD  212

Query  181  VRHEIIKKGAGISLSTNYFFDKKKISHSTEISFISDINFDITYYIYFKSSVINKEFFIQY  240
            +R+++I KGAG+S++ N +   + I + + + F +DI+ DI YYIYFKSSVINKEFFI+Y
Sbjct  213  IRNNLIEKGAGLSIAVNGLNTINEIYNISSLYFDNDIDCDINYYIYFKSSVINKEFFINY  272

Query  241  ITNNSLLQWQKAE  253
            + +NS L W+  +
Sbjct  273  VHENSPLSWREVN  285