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Homologs of unnamed gene of JN559393

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) int
( YP_001100320.1 )

integrase

NC_009138
(Herminiimonas arsenicoxydans )

0.0

2) NH44784_010121
( YP_008028112.1 )

Integrase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

0.0

3) XCV2298
( YP_364029.1 )

phage-related integrase

NC_007508
(Xanthomonas campestris 85-10)

0.0

4) PLES_26051
( YP_002440204.1 )

phage-related integrase

NC_011770
(Pseudomonas aeruginosa LESB58)

0.0

5) intB13
( YP_001629879.1 )

phage-related integrase

NC_010170
(Bordetella petrii DSM 12804)

0.0

6) XF1718
( NP_299007.1 )

phage-related integrase

NC_002488
(Xylella fastidiosa 9a5c)

0.0

7) Plav_3466
( YP_001414722.1 )

integrase family protein

NC_009719
(Parvibaculum lavamentivorans DS-1)

0.0

8) intB13
( YP_001630153.1 )

phage-related integrase

NC_010170
(Bordetella petrii DSM 12804)

0.0

9) NH44784_009041
( YP_008028005.1 )

Integrase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

0.0

10) PADK2_11745
( YP_006482334.1 )

integrase

NC_018080
(Pseudomonas aeruginosa DK2)

0.0

11) intZ
( YP_006370231.1 )

site-specific recombinase, phage integrase family

NC_017956
(Tistrella mobilis KA081020-065)

0.0

12) AXYL_01141
( YP_003977200.1 )

integrase

NC_014640
(Achromobacter xylosoxidans A8)

0.0

13) Tola_2486
( YP_002893666.1 )

integrase family protein

NC_012691
(Tolumonas auensis DSM 9187)

0.0

14) NH44784_008341
( YP_008027936.1 )

Integrase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

0.0

15) intS
( NP_637474.1 )

phage-related integrase

NC_003902
(Xanthomonas campestris ATCC 33913)

0.0

16) XC_2002
( YP_243085.1 )

phage-related integrase

NC_007086
(Xanthomonas campestris 8004)

0.0

17) xccb100_2067
( YP_001903472.1 )

phage-related integrase

NC_010688
(Xanthomonas campestris B100)

0.0

18) Ajs_1340
( YP_985634.1 )

phage integrase family protein

NC_008782
(Acidovorax sp. JS42)

0.0

19) Neut_0006
( YP_746264.1 )

phage integrase family protein

NC_008344
(Nitrosomonas eutropha C91)

0.0

20) Pecwa_1597
( YP_003258994.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

0.0

21) W5S_1461
( YP_006282427.1 )

Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_017845
(Pectobacterium sp. SCC3193)

0.0

22) Alide_1840
( YP_004126474.1 )

integrase family protein

NC_014910
(Alicycliphilus denitrificans BC)

1e-164

23) Alide2_1822
( YP_004387723.1 )

integrase family protein

NC_015422
(Alicycliphilus denitrificans K601)

3e-164

24) Ajs_1977
( YP_986229.1 )

phage integrase family protein

NC_008782
(Acidovorax sp. JS42)

2e-163

25) BN117_0506
( YP_006894556.1 )

phage-related integrase

NC_018828
(Bordetella parapertussis Bpp5)

2e-163

26) Mpe_A2408
( YP_001021598.1 )

integrase (int)

NC_008825
(Methylibium petroleiphilum PM1)

4e-163

27) A458_06740
( YP_006457017.1 )

integrase family protein

NC_018028
(Pseudomonas stutzeri CCUG 29243)

4e-161

28) PSF113_3288
( YP_005208681.1 )

integrase family protein

NC_016830
(Pseudomonas fluorescens F113)

1e-155

29) DSC_03650
( YP_004929424.1 )

integrase family protein

NC_016147
(Pseudoxanthomonas spadix BD-a59)

1e-155

30) PputW619_3372
( YP_001750225.1 )

integrase family protein

NC_010501
(Pseudomonas putida W619)

8e-156

31) intB13
( YP_001630042.1 )

phage-related integrase

NC_010170
(Bordetella petrii DSM 12804)

9e-155

32) int
( YP_158323.1 )

integrase (int)

NC_006513
(Aromatoleum aromaticum EbN1)

2e-153

33) Alide2_1967
( YP_004387858.1 )

integrase family protein

NC_015422
(Alicycliphilus denitrificans K601)

6e-149

34) XC_1018
( YP_242112.1 )

phage-related integrase

NC_007086
(Xanthomonas campestris 8004)

6e-149

35) intS
( NP_638493.1 )

phage-related integrase

NC_003902
(Xanthomonas campestris ATCC 33913)

6e-149

36) PSTAB_1251
( YP_004713621.1 )

integrase (int)

NC_015740
(Pseudomonas stutzeri ATCC 17588)

9e-142

37) intB13
( YP_001632932.1 )

phage-related integrase

NC_010170
(Bordetella petrii DSM 12804)

4e-133

38) Daci_4139
( YP_001565155.1 )

integrase family protein

NC_010002
(Delftia acidovorans SPH-1)

4e-133

39) NCGM2_1452
( YP_005979703.1 )

integrase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

2e-131

40) PSTAA_1290
( YP_005937942.1 )

integrase family protein

NC_017532
(Pseudomonas stutzeri DSM 4166)

5e-131

• Sequence Alignments

1) int in NC_009138


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score = 1002 bits (3798),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 644/647 (99%), Positives = 647/647 (100%), Gaps = 0/647 (0%)

Query  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60
            MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120
            LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180
            STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240
            ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIRIDGVPAMAEVEEAVDATLAMAEptppgvppvvatpivvtpSSGGITFQRLSQVpp  480
            HLTIRIDGVPAMAEVEE++DATL+MAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  481  ppthapepEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540
            PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600
            GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647
            PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

2) NH44784_010121 in NC_021285


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  990 bits (3750),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 636/647 (99%), Positives = 644/647 (99%), Gaps = 0/647 (0%)

Query  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60
            MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARIERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120
            LREAR ERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFNKDVLPTLGRMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQLFRY  180
            STLSQILRIFNKDVLPTLG+MSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240
            ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQ+YLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIRIDGVPAMAEVEEAVDATLAMAEptppgvppvvatpivvtpSNGGITFQRLSQVpp  480
            HLTIRIDGVPAMAEVEE++DATL+MAEPTPPGVPPVVATPIVVTPS+GGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  481  ppthapepEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540
            PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCPHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600
            GNRGQRVPDWQLVPLKHKLAQVLMNQC HADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  601  PAIIQVIMGDYQHYADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647
            PAII+VIMGDYQH ADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

3) XCV2298 in NC_007508


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  953 bits (3612),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/647 (92%), Positives = 627/647 (97%), Gaps = 0/647 (0%)

Query  1    MALSDLIVRQAKTTGKRYTLHDNDCLSLMVSAAGGKSWIFRYSWLGTQKRMSLGSYPALS  60
            MALSDL VRQAKTTGKRYTL DNDCL+LMVSAAGGKSW FRY WLG QKR+ LG+YPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARAERDKAQALIARGIDPRIERDQRRHAARLAGEYTFKNVFDAWVEHRRKELKEGRQ  120
            LREAR+ERDKAQAL+ARGIDP++ERDQ+RHAA+LAGEYTFK VFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLVGVVAAIEKRKAFTTAEKVRTWFNQMFRY  180
            STLSQILRIFNKDVLPTLGKMSIYDIRRPQL+GV+AAIEKRKAFTTAEKVRTWFNQMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL  240
            ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPE+PEFLQKLR YNPRGWQTQLGVRL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQ+VKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQ+YLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIRIDGVPVMAEAEDVVSAAPTVAEPVASGVSPVVATPIVVTPNSGGITFQRLSQVpp  480
            HLTIRIDGVP MAE E+ + A+ T+AEP ++GV+PVVATPIVVTP+SGGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  481  ppthapepEVSAIQREREEMLAMYESPNNLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540
            PPTHAPEPEVSAIQREREEML++YESP++LPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCPRADSWELYRMLTQPHPDLGDRAAIDAVTPTNV  600
            GNRGQRVPDWQLVPLKHKLAQVLMNQC +ADSW+LYRMLTQPHPDLGDRAAIDAVTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  601  PTIIRVIMGDYQRHADAPEAVAIWPTPGDVRQSVRRLVDSAVVFEGA  647
            P+IIRVIMGDYQ+HAD PEA+A  P P DVRQSVRRLVDSAVV++GA
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

4) PLES_26051 in NC_011770


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  934 bits (3539),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 608/647 (94%), Positives = 630/647 (98%), Gaps = 0/647 (0%)

Query  1    MALSDLTVRQARTTGKRYTLSDNDCLGLMVSAAGGKSWIFRYYWLGKQKRMSLGGYPALS  60
            MALSDLTVRQA+TTGKRYTLSDNDCLGLMVSAAGGKSW FRYYWLGKQKR+ LGGYPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARAERDKAQVLLAKGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQ  120
            LREAR+ERDKAQ LLA+GIDPQ+ERDQ+RHAAKLAGEYTFK VFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLVGVVAAIEKRKAFTTAEKVRTWFNQMFRY  180
            STLSQILRIFNKDVLPTLGKMSIYDIRRPQL+GV+AAIEKRKAFTTAEKVRTWFNQMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL  240
            ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPE+PEFLQKLR YNPRGWQTQLGVRL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQ+VKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQ+YLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIRIDGVPamaeveevvgavsttaepvvpgvppvvatpivvtpNSGGIMFQRLSQvpp  480
            HLTIRIDGVPAMAEVEE ++A  T AEP  PGVPPVVATPIVVTP+SGGI FQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  481  ppvhapepevSAIQREREEMLAIYESPNNLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540
            PP HAPEPEVSAIQREREEML+IYESP++LPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCPHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600
            GNRGQRVPDWQLVPLKHKLAQVLMNQC HADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  601  PAIIRVLMGDYQHHADVPEAVAPRPIPEDVRQSVRRLVDSAAVLEGV  647
            PAIIRV+MGDYQHHAD+PEA+AP PIPEDVRQSVRRLVDSA VL+G 
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

5) intB13 in NC_010170


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  922 bits (3493),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 594/647 (92%), Positives = 625/647 (97%), Gaps = 6/647 (0%)

Query  1    MALSDLTVRQARTTGKRYTISDNDCLGLMVSAAGGKSWQFRYYRLGKQKRMSLGGYPALS  60
            MALSDLTVRQA+TTGKRYT+SDNDCLGLMVSAAGGKSWQFRYY+LGKQKR+ LGGYPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARAERDKAQALLARGIDPQVERDQRRHAVRLAGEYTFKTVFDAWVEHRRKELKEGRQ  120
            LREAR+ERDKAQALLARGIDPQVERDQ+RHA +LAGEYTFKTVFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STMSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQLFRY  180
            ST+SQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVTHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGIRL  240
            ALVIAEGLEVNPAADLDVVAEPKPPV+HNPYLHLPEMPEFLQKLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQ+VKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQ+YLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIRIDGVPAMAEVEEAVDATLTMAEptppgvppvvatpivvtpSSGGITFQRLSQVpp  480
            HLTIRIDGVPAMAEVEE++DATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  481  ppthapepEVSAIQREREEMLTIYESPSNLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540
            PPTHAPEPEVSAIQREREEMLTIYESPS+LPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCPHADSWELYRMLTQPHPDLGDRGAIDVVTPANL  600
            GNRGQRVPDWQLVPLKHKLAQVLMNQC HADSW+LYRMLTQPHPDLGDR+AID VTP+N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  601  gvvvq------viaggqqavSPPLSISEDVRQSVRRLLDSAVVAEGA  641
              +++         ++     +P +I+EDVRQSVRRL+DSAVV +GA
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

6) XF1718 in NC_002488


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  916 bits (3469),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/653 (91%), Positives = 627/653 (97%), Gaps = 6/653 (0%)

Query  1    MALSDLTVRQARTTGKRYTLSDNDCLGLMVSAAGGKSWIFRYYWLGKQKRMSLGGYPALS  60
            MALSDLTVRQA+TTGKRYTLSDNDCLGLMVSAAGGKSW FRYYWLGKQKR+ LGGYPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARAERDKAQALLARGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQ  120
            LREAR+ERDKAQALLARGIDPQ+ERDQ+RHAAKLAGEYTFK VFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLVGVVAAIEKRKAFTTAEKVRTWFNQMFRY  180
            STLSQILRIFNKDVLPTLGKMSIYDIRRPQL+GV+AAIEKRKAFTTAEKVRTWFNQMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRLYNPRGWQTQLGIRL  240
            ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPE+PEFLQKLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQ+VKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTINKALQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQ+YLLSHRSELKKRISENT+NKA+QLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGQVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG+VEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIRIDgvpamaeveeavgavdavdaaptvaepavpgvppvvatpivvtpNSGGITFQR  480
            HLTIRID       V       +++DA+ T+AEP+ PGVPPVVATPIVVTP+SGGITFQR
Sbjct  421  HLTIRID------GVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQR  474

Query  481  LSQvppppvhapepevSAIQREREEMLAIYESPNNLPVPLFGKLAGKSKDQINRELKAGK  540
            LSQVPPPP HAPEPEVSAIQREREEML+IYESP++LPVPLFGKLAGKSKDQINRELKAGK
Sbjct  475  LSQVPPPPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGK  534

Query  541  LLSISLGNRGQRVPDWQLVPLKHRLVQVLMNQCPHADSWDLYRMLTQPHPDLGDRAAIDA  600
            LLSISLGNRGQRVPDWQLVPLKH+L QVLMNQC HADSWDLYRMLTQPHPDLGDRAAIDA
Sbjct  535  LLSISLGNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDA  594

Query  601  VTPANVPAIIRVIMGDYQQREDVPEVVAPRSIPDDVRLSVRRLVDSAVVLEGA  653
            VTP+NVPAIIRVIMGDYQ++ D+PE +AP +IP+DVR SVRRLVDSAVVL+GA
Sbjct  595  VTPTNVPAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

7) Plav_3466 in NC_009719


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  874 bits (3309),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 534/647 (83%), Positives = 604/647 (94%), Gaps = 4/647 (0%)

Query  2    MALSDLTVRQAKAADKTYSLPDTDGLGLVVAPTGGKSWHLRYYWLGKQKRISLGNYPEIG  61
            MALSDLTVRQAK+++K Y+L+D D LGL+V+++GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  62   LREARTLRDEARALLARGINPHTDRKQKRHAVKLAADYTFKAVFDAWVEHRRKELKEGRQ  121
            LREART RD A+ALLARGI+P+ +R QKRHA KLA++YTFK+VFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  122  STLSQILRIFGKDVLPALGKMSIYDIRRPQLLGVLARIEERKAFTTAEKVRTWLSQLFRY  181
            STLSQILRIF KDVLP+LGKMSIYDIRRPQLLGVLA IE RKAFTTAEKVRTW++Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  182  ALVIVEGLEANPASDLDVVAEPKPPVNHNPYLHLPELPEFLQKLRLYNPRGWQTQLGIRL  241
            ALVI EGLE NPA+DLDVVAEPKPPV HNPYLHLPE+PEFLQKLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  242  LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  301
            LFLTGVRTGELRLA P+QFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  302  AIEIVSYLLGVIRPAQRHLLAHRSELKKRISENTLNAALKRMGYEDQLTGHGIRGTISTA  361
            AIEIV YLLGV+RPAQR LL+HRSELKKRISENTLN A++ MGYE++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  362  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGQVEAASA  421
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG+VEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  422  HLTIHIEGVPAMAEED---KPDaivaassaapvpsmvtapIVVTPNDGSITFQRLSQVpp  478
            HLTI+I+GVPAMAE +    +   +A ++++ VP++V++PIVVTP+ G+ITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  479  ppthapepEVSAIQREREEMLAIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSVSL  538
            PPTHAPEPEVSAIQREREEML+IYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLS+SL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  539  GNRGQRVPDWQLVPLKHKLAQVLMRQCPQADSWELYRMLTRPHPDLGDRAAIDLVTPSNL  598
            GNRGQRVPDWQLVPLKHKLAQVLM QC +ADSW+LYRMLT+PHPDLGDRAAID VTP+N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  599  GMVVQVIASG-QFHANAPETVPPRPIPEEVRQSVRRMVDSAVVLDGA  644
              +++VI ++ Q HA+ PE+++P PIPE+VRQSVRR+VDSAVVLDGA
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

8) intB13 in NC_010170


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  855 bits (3238),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/607 (91%), Positives = 586/607 (97%), Gaps = 0/607 (0%)

Query  15   MALSDLIVRQAKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALS  74
            MALSDL VRQAKTTGKRYTL DNDCL+LMVSAAGGKSW FRY WLGKQKR+ LGGYPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  75   LREARAERDKAQALIARGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQ  134
            LREAR+ERDKAQAL+ARGIDPQ+ERDQ+RHAAKLAGEYTFK VFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  135  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  194
            STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  195  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL  254
            ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPE+PEFLQKLR YNPRGWQTQLGVRL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  255  LFLTGVRTGELRLAEPEQFDLDRGFWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  314
            LFLTGVRTGELRLAEPEQFDLDRG+WIIPP++VKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  315  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  374
            AIEIVRYLLGVMRPAQ+YLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  375  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVQAASA  434
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQGEV+AASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  435  HLTIRIDGvpamaeveeavdvaptvaepGVSGSppvaatpivvtpNSGGITFQRLSQVPP  494
            HLTIRIDGVPAMAEVEE++D + T+AEP  +G PPV ATPIVVTP+SGGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  495  PPAHAPESEVSAIQREREEMLAMYESPNNLPVALFGKLAGKSKDQINRELKAGKLLSISL  554
            PP+HAPE+EVSAIQREREEML++YESP++LPV+LFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  555  GNRGQRVPDWQLVPLKRRLAQALMNQCPHVDSWALYRLLTKPHSNLGNRAAIDVVTPTNV  614
            GNRGQRVPDWQLVPLK++LAQ LMNQC H DSW LYR+LT+PH++LG+RAAID VTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  615  GKVLQAV  621
              +++ +
Sbjct  601  PAIIRVI  607

9) Bxe_A1097 in NC_007951


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  855 bits (3238),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/607 (91%), Positives = 586/607 (97%), Gaps = 0/607 (0%)

Query  1    MALSDLIVRQAKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALS  60
            MALSDL VRQAKTTGKRYTL DNDCL+LMVSAAGGKSW FRY WLGKQKR+ LGGYPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARAERDKAQALIARGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQ  120
            LREAR+ERDKAQAL+ARGIDPQ+ERDQ+RHAAKLAGEYTFK VFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180
            STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL  240
            ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPE+PEFLQKLR YNPRGWQTQLGVRL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLAEPEQFDLDRGFWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLAEPEQFDLDRG+WIIPP++VKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQ+YLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVQAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQGEV+AASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIRIDGvpamaeveeavdvaptvaepGVSGSppvaatpivvtpNSGGITFQRLSQVPP  480
            HLTIRIDGVPAMAEVEE++D + T+AEP  +G PPV ATPIVVTP+SGGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  481  PPAHAPESEVSAIQREREEMLAMYESPNNLPVALFGKLAGKSKDQINRELKAGKLLSISL  540
            PP+HAPE+EVSAIQREREEML++YESP++LPV+LFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  541  GNRGQRVPDWQLVPLKRRLAQALMNQCPHVDSWALYRLLTKPHSNLGNRAAIDVVTPTNV  600
            GNRGQRVPDWQLVPLK++LAQ LMNQC H DSW LYR+LT+PH++LG+RAAID VTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  601  GKVLQAV  607
              +++ +
Sbjct  601  PAIIRVI  607

10) NH44784_009041 in NC_021285


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  840 bits (3181),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 519/648 (81%), Positives = 592/648 (92%), Gaps = 5/648 (0%)

Query  2    MTLSDLTVRQAKAAEKTYSIPDTDGLGLVVARTGGKSWHLRYYWLGKQKRISLGNYPEIG  61
            M+LSDLTVRQAK++ K Y+++D D LGL+V+ +GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  62   LREARTLRDEARALLAKGVNPHTDRKQKRHAVKLAADYTFKAVFDAWVEHRRKEIKEGRN  121
            LREART RD A+ALLA+G++P+ +R QKRHA KLA++YTFK+VFDAWVEHRRKE+KEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  122  STLSQILRIFNKDVLPSLKQMSIYDIRRPQLLGVLARIEERKAFTTAEKVRTWLGQLFRY  181
            STLSQILRIFNKDVLP+L +MSIYDIRRPQLLGVLA IE RKAFTTAEKVRTW+ Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  182  ALVIVEGLEANPASDLDVVAEPKPPVNHNPYLHLPELPEFLHKLRLYNPRGWQTQLGIRL  241
            ALVI EGLE NPA+DLDVVAEPKPPV HNPYLHLPE+PEFL+KLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  242  LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSVQ  301
            LFLTGVRTGELRLA P+QFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  302  AIEIVRYLLGVMRPAQVHLLTHRSELKKRISENTLNAALKRMGYEDQLTGHGIRGTISTA  361
            AIEIVRYLLGVMRPAQ  LL+HRSELKKRISENTLN A++ MGYE++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  362  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGQVEAASA  421
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG+VEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  422  HLTIHIEGVPAMAEED---KPNtivaaasaasvppvvaepivvtpNDGGITFQRLSQVpp  478
            HLTI+I+GVPAMAE +    +   +A +++++VPPVVA PIVVTP+ GGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  479  ppthapepEVSVIQREREEMLVIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  538
            PPTHAPEPEVS IQREREEML IYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  539  GNRGQRVPDWQLVPLKHKLAQVLMNQCPHADPWDLYRMLTRPHPDLGDRAAIDIVTPGNL  598
            GNRGQRVPDWQLVPLKHKLAQVLMNQC HAD+WDLYRMLT+PHPDLGDRAAID VTP N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  599  GMVVRVIAGT-QQQPNRPGPDSSVQGIPEETRQRIQRLLNDAAMLESA  645
              ++RVI G  Q++++ P + ++   IPE+ RQ ++RL++ A +L++A
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYP-IPEDVRQSVRRLVDSAVVLDGA  647

11) PADK2_11745 in NC_018080


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  840 bits (3181),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 519/648 (81%), Positives = 592/648 (92%), Gaps = 5/648 (0%)

Query  1    MTLSDLTVRQAKAAEKTYSIPDTDGLGLVVARTGGKSWHLRYYWLGKQKRISLGNYPEIG  60
            M+LSDLTVRQAK++ K Y+++D D LGL+V+ +GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARTLRDEARALLAKGVNPHTDRKQKRHAVKLAADYTFKAVFDAWVEHRRKEIKEGRN  120
            LREART RD A+ALLA+G++P+ +R QKRHA KLA++YTFK+VFDAWVEHRRKE+KEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFNKDVLPSLKQMSIYDIRRPQLLGVLARIEERKAFTTAEKVRTWLGQLFRY  180
            STLSQILRIFNKDVLP+L +MSIYDIRRPQLLGVLA IE RKAFTTAEKVRTW+ Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIVEGLEANPASDLDVVAEPKPPVNHNPYLHLPELPEFLHKLRLYNPRGWQTQLGIRL  240
            ALVI EGLE NPA+DLDVVAEPKPPV HNPYLHLPE+PEFL+KLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSVQ  300
            LFLTGVRTGELRLA P+QFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQVHLLTHRSELKKRISENTLNAALKRMGYEDQLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQ  LL+HRSELKKRISENTLN A++ MGYE++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGQVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG+VEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIHIEGVPAMAEED---KPNtivaaasaasvppvvaepivvtpNDGGITFQRLSQVpp  477
            HLTI+I+GVPAMAE +    +   +A +++++VPPVVA PIVVTP+ GGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  478  ppthapepEVSVIQREREEMLVIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  537
            PPTHAPEPEVS IQREREEML IYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  538  GNRGQRVPDWQLVPLKHKLAQVLMNQCPHADPWDLYRMLTRPHPDLGDRAAIDIVTPGNL  597
            GNRGQRVPDWQLVPLKHKLAQVLMNQC HAD+WDLYRMLT+PHPDLGDRAAID VTP N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  598  GMVVRVIAGT-QQQPNRPGPDSSVQGIPEETRQRIQRLLNDAAMLESA  644
              ++RVI G  Q++++ P + ++   IPE+ RQ ++RL++ A +L++A
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYP-IPEDVRQSVRRLVDSAVVLDGA  647

12) intZ in NC_017956


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  840 bits (3181),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 519/648 (81%), Positives = 592/648 (92%), Gaps = 5/648 (0%)

Query  2    MTLSDLTVRQAKAAEKTYSIPDTDGLGLVVARTGGKSWHLRYYWLGKQKRISLGNYPEIG  61
            M+LSDLTVRQAK++ K Y+++D D LGL+V+ +GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  62   LREARTLRDEARALLAKGVNPHTDRKQKRHAVKLAADYTFKAVFDAWVEHRRKEIKEGRN  121
            LREART RD A+ALLA+G++P+ +R QKRHA KLA++YTFK+VFDAWVEHRRKE+KEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  122  STLSQILRIFNKDVLPSLKQMSIYDIRRPQLLGVLARIEERKAFTTAEKVRTWLGQLFRY  181
            STLSQILRIFNKDVLP+L +MSIYDIRRPQLLGVLA IE RKAFTTAEKVRTW+ Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  182  ALVIVEGLEANPASDLDVVAEPKPPVNHNPYLHLPELPEFLHKLRLYNPRGWQTQLGIRL  241
            ALVI EGLE NPA+DLDVVAEPKPPV HNPYLHLPE+PEFL+KLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  242  LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSVQ  301
            LFLTGVRTGELRLA P+QFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  302  AIEIVRYLLGVMRPAQVHLLTHRSELKKRISENTLNAALKRMGYEDQLTGHGIRGTISTA  361
            AIEIVRYLLGVMRPAQ  LL+HRSELKKRISENTLN A++ MGYE++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  362  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGQVEAASA  421
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG+VEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  422  HLTIHIEGVPAMAEED---KPNtivaaasaasvppvvaepivvtpNDGGITFQRLSQVpp  478
            HLTI+I+GVPAMAE +    +   +A +++++VPPVVA PIVVTP+ GGITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  479  ppthapepEVSVIQREREEMLVIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  538
            PPTHAPEPEVS IQREREEML IYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  539  GNRGQRVPDWQLVPLKHKLAQVLMNQCPHADPWDLYRMLTRPHPDLGDRAAIDIVTPGNL  598
            GNRGQRVPDWQLVPLKHKLAQVLMNQC HAD+WDLYRMLT+PHPDLGDRAAID VTP N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  599  GMVVRVIAGT-QQQPNRPGPDSSVQGIPEETRQRIQRLLNDAAMLESA  645
              ++RVI G  Q++++ P + ++   IPE+ RQ ++RL++ A +L++A
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYP-IPEDVRQSVRRLVDSAVVLDGA  647

13) AXYL_01141 in NC_014640


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  832 bits (3151),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 508/649 (79%), Positives = 583/649 (90%), Gaps = 5/649 (0%)

Query  2    MTLSDLTVRQAKAAEKTYSIPDTDGLGLVVARTGGKSWHLRYYWLGKQKRISLGNYPEIG  61
            M+LSDLTVRQAK++ K Y+++D D LGL+V+ +GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  62   LREARTLRDEARALLAKGVNPHTDRKQKRHAVKLAADYTFKAVFDAWVEHRRKEIKEGRN  121
            LREART RD A+ALLA+G++P+ +R QKRHA KLA++YTFK+VFDAWVEHRRKE+KEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  122  STLSQILRIFNKDVLPSLKQMSIYDIRRPQLLGVLARIEERKAFTTAEKVRTWLGQLFRY  181
            STLSQILRIFNKDVLP+L +MSIYDIRRPQLLGVLA IE RKAFTTAEKVRTW+ Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  182  ALVIVEGLEANPASDLDVVAEPKPPVNHNPYLHLPELPDFLHKLRLYNPRGWQTQLGIRL  241
            ALVI EGLE NPA+DLDVVAEPKPPV HNPYLHLPE+P+FL+KLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  242  LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSVQ  301
            LFLTGVRTGELRLA P+QFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  302  AIEIVRYLLGVMKPAQVHLLTHRSELKKRISENTLNAALKRMGYEDQLTGHGIRGTISTA  361
            AIEIVRYLLGVM+PAQ  LL+HRSELKKRISENTLN A++ MGYE++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  362  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGQVEAASA  421
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG+VEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  422  HLTIHIEGVPAIAGED---NPDAIvagtsaasappvvvtpivvtpNDAGITFQRLSQVpp  478
            HLTI+I+GVPA+A  +   ++   +A  ++++ PPVV TPIVVTP+ +GITFQRLSQV  
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQV--  478

Query  479  pptrapapapEVSAIQREREEMLAIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSI  538
            PP  + AP PEVSAIQREREEML+IYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSI
Sbjct  479  PPPPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSI  538

Query  539  SLGNRGQRVPDWQLVPLKHKLAQVLMNQCPHADSWDLYRMLTRVHPDLGDRAAIDIVTPG  598
            SLGNRGQRVPDWQLVPLKHKLAQVLMNQC HADSWDLYRMLT+ HPDLGDRAAID VTP 
Sbjct  539  SLGNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPT  598

Query  599  NLGMVVRVIAGTQQQPNRPGPDSSAQGIPEEIRQRIQRLLNDAAMLESA  647
            N+  ++RVI G  Q+        ++  IPE++RQ ++RL++ A +L++A
Sbjct  599  NVPAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

14) Tola_2486 in NC_012691


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  830 bits (3141),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 530/647 (82%), Positives = 604/647 (94%), Gaps = 4/647 (0%)

Query  1    MALSDLTVRQAKAADKTYSIPDTDGLGLVVAPTSGKSWHLRYYWLGKQKRISLGNYPEIG  60
            MALSDLTVRQAK+++K Y+++D D LGL+V++++GKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   lrearalrdearallaKGINPHTDRKQKRHAVKLASDYTFKAVFDAWVEHRRKELKEGRQ  120
            LREAR+ RD A+ALLA+GI+P+ +R QKRHA KLA++YTFK+VFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFDKDVLPSLGRMSIYDIRRPQLLGVLARIEQRKAFTTAEKVRTWLGQLFRY  180
            STLSQILRIF+KDVLP+LG+MSIYDIRRPQLLGVLA IE+RKAFTTAEKVRTW+ Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIVEGMETNPATDLDVVAEPKPPVNHNPYLHLPELPEFLQKLRLYNPRGWQTQLGIRL  240
            ALVI EG+E NPA+DLDVVAEPKPPV HNPYLHLPE+PEFLQKLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLA P+QFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEILRYLLGVMRPAQQYLLTHRSDLKKRISENTLNAALKRMGYEDQLTGHGIRGTISTA  360
            AIEI+RYLLGVMRPAQ+YLL+HRS+LKKRISENTLN A++ MGYE++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGQVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG+VEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIHIEGvpamveaedaaaiveaspa---vpvppvvatpiivtpntAGATFQRLSQVpp  477
            HLTI+I+GVPAM E E++     + +      VPPVVATPI+VTP+++G TFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  478  pptrtpepeVSAIQREREEMLAIYESPNNLPVPLFGKLAGKSKDQINRELKAGKLLSISL  537
            PPT++PEPEVSAIQREREEML+IYESP++LPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  538  GNRGQRVPDWQLVPLKHKLALVLMNQCPEADSWELYRMLTRPHPDLGDRAAIDVVTPTNL  597
            GNRGQRVPDWQLVPLKHKLA VLMNQC +ADSW+LYRMLT+PHPDLGDRAAID VTPTN+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  598  VAVVRTIAGD-QQHADAPETVSPRPIPEQVRQSVRRLVDSTVVLEGA  643
             A++R I GD Q+HAD PE+++P PIPE+VRQSVRRLVDS+VVL+GA
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

15) NH44784_008341 in NC_021285


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  821 bits (3109),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 507/647 (79%), Positives = 582/647 (90%), Gaps = 5/647 (0%)

Query  2    MTLSDLTVRQAKAAEKAYSIPDTDGLGLVVTPTGGKSWHLRYYWLGKQKRISLGNYPEIG  61
            M+LSDLTVRQAK++ K Y+++D D LGL+V+++GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  62   LREARTLRDEARALLAQGINPHTDRKQKRHAVKLASDYTFKAVFNAWVEHRAKELKEGRN  121
            LREART RD A+ALLA+GI+P+ +R QKRHA KLA++YTFK+VF+AWVEHR KELKEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  122  STLSQIKRIFEKDVLPSLGKMSIYDIRRPQLLGVLAKIEGRKAFTTAEKVRTWLGQLFRY  181
            STLSQI RIF+KDVLP+LGKMSIYDIRRPQLLGVLA IE RKAFTTAEKVRTW+ Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  182  ALVIVEGLEVNPASDLDVVAEPKPPVTHNPYLHLPELPEFLQKLRLYNPRGWQTQLGIRL  241
            ALVI EGLEVNPA+DLDVVAEPKPPV+HNPYLHLPE+PEFLQKLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  242  LLLTGVRTGELRLATPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  301
            L+LTGVRTGELRLA PEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  302  AIEIVRYLLEVMRPAQIHLLTHRSELKKRISENTLNAALKRMGYEDQLTGHGIRGTISTA  361
            AIEIVRYLL VMRPAQ  LL+HRSELKKRISENTLN A++ MGYE++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  362  LNEVGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGRVEAASA  421
            LNE+GYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG VEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  422  HLTIHIEGVPAMAEEDGPIAIT---ATSSippmppviatpivvtpSDAGITFQRLSQVpp  478
            HLTI+I+GVPAMAE +  +  T   A ++ P +PPV+ATPIVVTPS +GITFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  479  ppthapepEVSAIQREREEMLAMYESPNNLPVPLFGKLAGKSKDQINRELKAGKLLSVSM  538
            PPTHAPEPEVSAIQREREEML++YESP++LPVPLFGKLAGKSKDQINRELKAGKLLS+S+
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  539  GNRGQRVPDWQLVPLKHKLAQVLMNRCPHADSWELYRLLTMPHPQLGNRAAIDVITPTNL  598
            GNRGQRVPDWQLVPLKHKLAQVLMN+C HADSW+LYR+LT PHP+LG+RAAID +TPTN+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  599  GKVLQAVVPNTQFGNIRTDETQQFCEP--VRRTVRRLESQPEALEEA  643
              +++ ++ + Q      +    +  P  VR++VRRL   +  L+ A
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

16) intS in NC_003902


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  792 bits (2997),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/610 (81%), Positives = 557/610 (92%), Gaps = 8/610 (1%)

Query  3    MALSDLTVRQAKAAEKTYSIPDTDGLGLVVAPTGGKSWHLRYYWLGKQKRISLGNYPEVG  62
            MALSDLTVRQAK++ K Y+++D D LGL+V+++GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  63   LREARTLRDEARALVAKGINPHADRKQKRRAIKLASDYTFKAVFDAWVEHRAKELKEGRN  122
            LREART RD A+AL+A+GI+P+ +R QKR+A KLA++YTFK+VFDAWVEHR KELKEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  123  STLSQIQRIFGKDVLPSLERMSIYDIRRPQLLGVLARIERRKAFTTTEKVRTWLSQLFRY  182
            STLSQI RIF KDVLP+L +MSIYDIRRPQLLGVLA IE+RKAFTT+EKVRTW++Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  183  ALVIVEGMEANPATDLDVVAEPKPPVSHNPYLRLPELPDFLRKLRLYNPRGWQTQLGIRL  242
            ALVI EG+E NPA+DLDVVAEPKPPV+HNPYL+LPE+P+FL+KLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  243  LFLTGVRTGELRLATPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPHDIPPYIVPLSVQ  302
            LFLTGVRTGELRLA PEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRP+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  303  AIEIVRYLLGVMRPAQKHLLAHRSELKKRISENTLNAALKRVGYDAQLTGHGIRGTISTA  362
            AIEIVRYLLGVMRPAQ+ LL+HRSELKKRISENTLN A++ +GY+++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  363  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGKVEAAST  422
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG VEAAS+
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  423  HLTIHIEGvpamaeepaaiaavsakaa--------vsstpivvvpstEGTTFQRLSQVpp  474
            HLTI+I+GVPAMAE   ++ A  + A         V +TPIVV PS+ G TFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  pptrtpepeASAIQREREEMLAMYESPCCLPVPLFGKLAGKSKDQINRELKAGKLLSISL  534
            PPT++PEPE SAIQREREEML++YESP  LPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  535  GNRGQRVPDWQLVPLKHKLTQVLMNQCQGADSWDLFRMLTRPHTDLGDRAAIDVVTPTNV  594
            GNRGQRVPDWQLVPLKHKL+QVLMNQC  ADSWDL+RMLT+PH DLGDRAAID VTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  595  LAIVRTIMGD  604
             AI+R IMGD
Sbjct  601  PAIIRVIMGD  610

17) XC_2002 in NC_007086


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  791 bits (2994),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/610 (81%), Positives = 557/610 (92%), Gaps = 8/610 (1%)

Query  3    MALSDLTVRQAKAAEKTYSIPDTDGLGLVVAPTGGKSWHLRYYWLGKQKRISLGNYPEVG  62
            MALSDLTVRQAK++ K Y+++D D LGL+V+++GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  63   LREARTLRDEARALVAKGINPHADRKQKRRAIKLASDYTFKAVFDAWVEHRAKELKEGRN  122
            LREART RD A+AL+A+GI+P+ +R QKR+A KLA++YTFK+VFDAWVEHR KELKEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  123  STLSQIQRIFGKDVLPSLERMSIYDIRRPQLLGVLARIERRKAFTTTEKVRTWLSQLFRY  182
            STLSQI RIF KDVLP+L +MSIYDIRRPQLLGVLA IE+RKAFTT+EKVRTW++Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  183  ALVIVEGMEANPATDLDVVAEPKPPVSHNPYLRLPELPDFLRKLRLYNPRGWQTQLGIRL  242
            ALVI EG+E NPA+DLDVVAEPKPPV+HNPYL+LPE+P+FL+KLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  243  LFLTGVRTGELRLATPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPHDIPPYIVPLSVQ  302
            LFLTGVRTGELRLA PEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRP+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  303  AIEIVRYLLGVMRPAQKHLLAHRSELKKRISENTLNAALKRVGYDAQLTGHGIRGTISTA  362
            AIEIVRYLLGVMRPAQ+ LL+HRSELKKRISENTLN A++ +GY+++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  363  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGKVEAAST  422
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQG VEAAS+
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  423  HLTIHIEGvpamaeepaaiaavsakaa--------vsstpivvvpstEGTTFQRLSQVpp  474
            HLTI+I+GVPAMAE   ++ A  + A         V +TPIVV PS+ G TFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  pptrtpepeASAIQREREEMLALYESPCCLPVPLFGKLAGKSKDQINRELKAGKLLSISL  534
            PPT++PEPE SAIQREREEML++YESP  LPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  535  GNRGQRVPDWQLVPLKHKLTQVLMNQCQGADSWDLFRMLTRPHTDLGDRAAIDVVTPTNV  594
            GNRGQRVPDWQLVPLKHKL+QVLMNQC  ADSWDL+RMLT+PH DLGDRAAID VTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  595  LAIVRTIMGD  604
             AI+R IMGD
Sbjct  601  PAIIRVIMGD  610

18) xccb100_2067 in NC_010688


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  790 bits (2992),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/610 (81%), Positives = 557/610 (92%), Gaps = 8/610 (1%)

Query  3    MALSDLTVRQAKAAEKTYSIPDTDGLGLVVAPTGGKSWHLRYYWLGKQKRISLGNYPEVG  62
            MALSDLTVRQAK++ K Y+++D D LGL+V+++GGKSW++RYYWLGKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  63   LREARTLRDEARALVAKGINPHADRKQKRRAIKLASDYTFKAVFDAWVEHRAKELKEGRN  122
            LREART RD A+AL+A+GI+P+ +R QKR+A KLA++YTFK+VFDAWVEHR KELKEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  123  STLSQIQRIFGKDVLPSLERMSIYDIRRPQLLGVLARIERRKAFTTAEKVRTWLSQLFRY  182
            STLSQI RIF KDVLP+L +MSIYDIRRPQLLGVLA IE+RKAFTTAEKVRTW++Q+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  183  ALVIVEGMEANPATDLDVVAEPKPPVSHNPYLRLPELPDFLRKLRLYNPRGWQTQLGIRL  242
            ALVI EG+E NPA+DLDVVAEPKPPV+HNPYL+LPE+P+FL+KLRLYNPRGWQTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  243  LFLTGVRTGELRLATPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPHDIPPYIVPLSVQ  302
            LFLTGVRTGELRLA PEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRP+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  303  AIEIVRYLLGVMRPAQKHLLAHRSELKKRISENTLNAALKRVGYDAQLTGHGIRGTISTA  362
            AIEIVRYLLGVMRPAQ+ LL+HRSELKKRISENTLN A++ +GY+++LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  363  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMIQDWADRLDLLEQGKVEAAST  422
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRM+QDWADRLDLLEQG VEAAS+
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  423  HLTIHIEGvpamaeepaaiaavsakaa--------vsstpivvvpstEGTTFQRLSQVpp  474
            HLTI+I+GVPAMAE   ++ A  + A         V +TPIVV PS+ G TFQRLSQVPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  pptrtpepeASAIQREREEMLAMYESPCCLPVPLFGKLAGKSKDQINRELKAGKLLSISL  534
            PPT++PEPE SAIQREREEML++YESP  LPVPLFGKLAGKSKDQINRELKAGKLLSISL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  535  GNRGQRVPDWQLVPLKHKLTQVLMNQCQGADSWDLFRMLTRPHTDLGDRAAIDVVTPTNV  594
            GNRGQRVPDWQLVPLKHKL+QVLMNQC  ADSWDL+RMLT+PH DLGDRAAID VTPTNV
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  595  LAIVRTIMGD  604
             AI+R IMGD
Sbjct  601  PAIIRVIMGD  610

19) Ajs_1340 in NC_008782


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  707 bits (2673),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 432/475 (91%), Positives = 455/475 (96%), Gaps = 1/475 (0%)

Query  1    MALSDLIVRQAKTTGKRYTLHDNDCLSLMVSAAGGKSWIFRYSWLGTQKRMSLGSYPALS  60
            MALSDL VRQAKTTGKRYTL DNDCL+LMVSAAGGKSW FRY WLG QKR+ LG+YPALS
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARAERDKAQALIARGIDPRIERDQRRHAARLAGEYTFKNVFDAWVEHRRKELKEGRQ  120
            LREAR+ERDKAQAL+ARGIDP++ERDQ+RHAA+LAGEYTFK VFDAWVEHRRKELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLVGVVAAIEKRKAFTTAEKVRTWFNQMFRY  180
            STLSQILRIFNKDVLPTLGKMSIYDIRRPQL+GV+AAIEKRKAFTTAEKVRTWFNQMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL  240
            ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPE+PEFLQKLR YNPRGWQTQLGVRL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQ+VKQLQDEMRKAGKRPQDVPPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  301  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLLGVMRPAQ+YLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420
            LNEIGYPKIWVDAQLSHSDPNKVSS+YNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  421  HLTIRIDGVPVMAEAEDVVSAAPTVAEPVASGVSPVVATPIVVTP-DGQSKFPHL  474
            HLTIRIDGVP MAE E+ + A+ T+AEP ++GV+PVVATPIVVTP  G   F +L
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRL  475

20) Neut_0006 in NC_008344


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  659 bits (2491),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 418/611 (69%), Positives = 527/611 (87%), Gaps = 6/611 (0%)

Query  1    MALSDMAVRQARATGKNYTLGDIDGLSLAVTAQGGRSWHFRYCWADKQKRMSLGTYPEIG  60
            MALSD++VRQA++TGK YTL+D D L+L V+A GG+SW+FRY W +KQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   lrearalrdqarallaKGINPKVDRKHKRQAVRLADEHNFKAVYLQWIEHRKLELKEGRQ  120
            LREAR+ RD+A+ALLA+GI+P+V+R +KR+A +LA+E  FK+V+  W+EHR+ ELKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQIQRIFKNDVLPSLGRTSIYDIRRSYLLEVLAKIEQRGALTTAEKVRTWFNQLFRF  180
            STLSQI RIF++DVLP+LG+ SIYDIRR+ LL VLA IE+R A+TTAEKVRTWFNQ+FR+
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVKIERLETNPASDLDVVAIPKPPAAHNPFLRLPEIPELLQKLRSYRGAV-TTKLGIRL  239
            ALV  E LE NPA+DLDVVA PKPP AHNP+L+LPE+PE+LQKLR Y      T+LG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  LMLTGVRTGELRLAAPDQFDLERGLWIIPPEVVKQLQLDMRKKGKRTQDIPPYIVPLSLQ  299
            L LTGVRTGELRLA P+QFDL+RGLWIIPP++VKQLQ +MRK GKR QD+PPYIVPLSLQ
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AIEIVQSLLERIKPAQRYLLAHRSDLTKRISENTLNGALKRMGYQDLLTGHGIRGTISTA  359
            AIEIV+ LL  ++PAQRYLL+HRS+L KRISENTLN A++ MGY++ LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEFGYLKKWVDAQLSHSDPDKVSTAYNHAEYVEPRRRMMQDWADRLDLLEQGHVAAAST  419
            LNE+GY K WVDAQLSHSDP+KVS++YNHA YVEPRRRMMQDWADRLDLLEQG+V AAS+
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  HLTIRIEGVPAMVNNKHASGPAVASA---TDSAQTTIETPIIVSAIDHGAAFQRLSPLPP  476
            HLTIRI+GVPAM +  ++ +++++ A     +    + TPI+V++   G +FQRLS +PP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  477  ATAHVLAPEPETSTIQREREEMLAIYEAPDNLPVPLFAKLAGKSKDQINRELKAGKLLSI  536
            + +H  APEPE S+IQREREEML+IYE+P +LPVPLF+KLAGKSKDQINRELKAGKLLSI
Sbjct  481  PPTH--APEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSI  538

Query  537  SLGNRGQRVPDWqlvplkqklvqvllkqCPDTDPWALYHLLTKPHAELSDRTAIDTVTPS  596
            SLGNRGQRVPDWQLVPLK+KL QVL++QC ++D+W LY++LT+PH++L+DR+AID+VTP+
Sbjct  539  SLGNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPT  598

Query  597  NLGTVLQAITS  607
            N+ ++++ I +
Sbjct  599  NVPAIIRVIMG  609

21) Pecwa_1597 in NC_013421


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  652 bits (2465),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 403/611 (66%), Positives = 514/611 (85%), Gaps = 21/611 (3%)

Query  1    MALSDMAVRQAKATGKAYTLGDIDGLSLAVTDMGGRSWHFRYSWAGKQKRMSLGTYPEVG  60
            MALSD++VRQAK+TGK YTL+D D L+L V+  GG+SW+FRY W GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARTLRDQARALLAKGINPKLDRKHKRQFVRLADEHTFKAVFLQWVEHRRLELKEGRN  120
            LREART RD+A+ALLA+GI+P+++R +KR+  +LA+E TFK+VF  WVEHRR ELKEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFERDVLPSLSKLSIYDVRRADLLNVLSKIEQREAFTTAEKVRSWLNQLFRF  180
            STLSQILRIF++DVLP+L+K+SIYD+RR++LL VL+ IE+R AFTTAEKVR+W+NQ+FR+
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  AQVKVERLESNPASDLDvvavpappvvHNPFlrlpelpellQKVRGYRGAI-TTQLGIRL  239
            A V  E LE NPA+DLDVVA P PPV HNP+L+LPE+PE+LQK+R Y      TQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  LLLTGVRTGELRLAAPEQFDLEQGLWIIPPEVVKQLQTDMRKKGKRPQDIPSYIVPLSIQ  299
            L+LTGVRTGELRLA PEQFDL++GLWIIPP++VKQLQ +MRK GKRPQD+P+YIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AIEIVRYLLEEVRPAQRYLFSHRSDLKKRISENTLNGALKRMGYQDLLTGHGIRGTISTA  359
            AIEIVRYLL  +RPAQRYL+SHRS+LKKRISENTLN A++ MGY++ LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEVGYPKVWVDAQLSHCDPNQVSAAYNHALYVEPRRKMMQDWADRLDLLEQGEVEAASQ  419
            LNE+GYPK+WVDAQLSH DPN+VS++YNHA YVEPRR+MMQDWADRLDLLEQGEVEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  HLTIRIDGVPVLDESNGA--DAMSKD----------------VSPIIGGITSHRLSavpa  461
            HLTIRIDGVP + E + +   +++                  V+P  GGIT +RLS VP+
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  462  rpvpepvvDIPVSDLQRERMEMLAAYEAPHNLPVVQFSKLAGKSKDQINREIKAGKLLTI  521
             P   P  +  VS +QRER EML+ YE+P +LPV  F+KLAGKSKDQINRE+KAGKLL+I
Sbjct  481  PPTHAPEPE--VSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSI  538

Query  522  SLGNRGQRVPEWQLVPMKLKLTQMMMKHLSHAEGWDVYRLLSNPHPELDGCAAVDIIKPT  581
            SLGNRGQRVP+WQLVP+K KL+Q++M++  HA++WD+YR+L++PHP+L++ AA+D + PT
Sbjct  539  SLGNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPT  598

Query  582  NMSSVVQVLLS  592
            N++++++V+++
Sbjct  599  NVPAIIRVIMG  609

22) W5S_1461 in NC_017845


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  645 bits (2437),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 403/612 (66%), Positives = 505/612 (83%), Gaps = 21/612 (3%)

Query  1    MALSDMAVRQARATGKAYTLGDIDGLSLAVTDMGGRSWHFRYSWAGKQKRMSLGTYPEVG  60
            MALSD++VRQA++TGK YTL+D D L+L V+  GG+SW+FRY W GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARTLRDQARALLAKGINPKLDRKHKRQFVRLADEHTFKAVFLQWVEHRKLELKEGRN  120
            LREART RD+A+ALLA+GI+P+++R +KR+  +LA+E TFK+VF  WVEHR+ ELKEGR+
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFERDVLPSLSKLSIYDVRRADLLNVLSKIEQREAFTTAEKVRSWLNQLFRF  180
            STLSQILRIF++DVLP+L+K+SIYD+RR++LL VL+ IE+R AFTTAEKVR+W+NQ+FR+
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  AQVKVERLESNPASDLDvvavpappvaHNPFlrlpelpellQKVRGYRGAI-TTQLGIRL  239
            A V  E LE NPA+DLDVVA P PPVAHNP+L+LPE+PE+LQK+R Y      TQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  LLLTGVRTGELRLATPEQFDLEQGLWIIPPEVVKQLQTDMRKKGKRPQDIPSYIVPLSIQ  299
            L+LTGVRTGELRLA PEQFDL++GLWIIPP++VKQLQ +MRK GKRPQD+P+YIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AIEIVRYLFEEVRPAQRYLFSHRSDLKKRISENTLNGALKRMGYQDLLTGHGIRGTISTA  359
            AIEIVRYL+  +RPAQRYL+SHRS+LKKRISENTLN A++ MGY++ LTGHGIRGTISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEVGYPKVWVDAQLSHCDPNQVSAAYNHALYVEPRRKMMQDWADRLDLLEQGEVEAASQ  419
            LNE+GYPK+WVDAQLSH DPN+VS++YNHA YVEPRR+MMQDWADRLDLLEQGEVEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  HLTIRIDGVPVLD--ESNVADVMPKD----------------VSPVIGGITPHRLSavpa  461
            HLTIRIDGVP +   E  +   +                   V+P  GGIT +RLS    
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLS--QV  478

Query  462  rpvpepvveipvSDLQRERMEMLAAYEAPHNLPVVQFAKLAGKSKEQINREIKAGKLLTI  521
             P P    E  VS +QRER EML+ YE+P +LPV  F+KLAGKSK+QINRE+KAGKLL+I
Sbjct  479  PPPPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSI  538

Query  522  SLGNRGQRVPEWQLVPMKLKLTQVMMKMLPHAEGWDVYRLLTSVHPELDDRAAIDIITPN  581
            SLGNRGQRVP+WQLVP+K KL+QV+M+   HA++WD+YR+LT  HP+L+DRAAID +TP 
Sbjct  539  SLGNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPT  598

Query  582  NMDNVVQVLLPQ  593
            N+  +++V++ +
Sbjct  599  NVPAIIRVIMGD  610

23) Alide_1840 in NC_014910


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  573 bits (2162),  Expect = 1e-164, Method: Compositional matrix adjust.
 Identities = 365/607 (61%), Positives = 490/607 (81%), Gaps = 7/607 (1%)

Query  1    MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVT  60
            MALSDL+VRQAK+TGK YTL+D D L+L V+AAGG++W+FRYYW GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARGLRDEARVLLAKGINPRVHRKQKRTAVRLADENTFDAVYRKWLKHRGLSLKEGRQ  120
            LREAR  RD A+ LLA+GI+P+V+R QKR A +LA+E TF +V+  W+ HR   LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  TTLSILPRIFDKDVLPTLGKRSIYEIKRPDLLEVIAKIEKRRALSVAEKVRTWFNQLFRY  180
            +TLS + RIF+KDVLPTLGK SIY+I+RP+LL V+A IEKR+A++ AEKVRTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIVPGLEQNPASDLDVVALPLPPVNHNPFLRMAELPKLLQRLRSYrgrr-qtqlglrv  239
            ALVI  GLE NPA+DLDVVA P PPV HNP+L+++E+P +LQ+LR Y  R  QTQLG+R+
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  llltgvrtgELRQATPDQFDLDRGLWIIPPDVVKQLQLDMRKKRQQPKDIPPYIVPLSIQ  299
            L+LTGVRTGELR A P+QFDLDRGLWIIPP++VKQLQ +MRK  ++P+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AMEIVRHLLDEFKPAQRHLFRHDSDLKKRISENTLNGALKRMGYQERLTGHGIRGTMSTA  359
            A+EIVR LL+  +PAQR L+ H S+LKKRISENTLN A++ MGY+ RLTGHGIRGT+STA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNQVEAASM  419
            LNEIGYPK+WVDAQLSH DPNKVS++YNHA YVE RRRMMQDWADRLDL+EQ +VEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  PLTVHLEGVPAFPSEQtasapstpvaaspILLVTKPGDAMPLVSAAA-----HRLPAVPP  474
             LT++++GVPA +  + +  ++  +A +    V     +  +V++++     +RL+ VPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  PRSAAPLVP-SDIQRERMELFDVFEAPHNLPVAAFAKMAGKSRRWISYEIKAGNLLALNV  533
            P + AP    S IQRER E++ ++E+P +LPV+ F+K+AGKS+  I+ E+KAG+LL++++
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  534  GNRGQRVPDWHLDPLKHELIQSVLKLTRGADPWQIYHALLQPRSMLRGHSALEGVTASNL  593
            GNRGQRVPDW+L PLKH L Q +++    AD+W++Y+ L QP++ L +++A+++VT++N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  594  DKLVMAV  600
              ++  +
Sbjct  601  PAIIRVI  607

24) Alide2_1822 in NC_015422


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  571 bits (2157),  Expect = 3e-164, Method: Compositional matrix adjust.
 Identities = 366/600 (61%), Positives = 488/600 (82%), Gaps = 7/600 (1%)

Query  1    MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVT  60
            MALSDL+VRQAK+TGK YTL+D D L+L V+AAGG++W+FRYYW GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARSLRDEARALLAKGTNPRVHRKQKRTAVRLADENTFDAVYRKWLKHRGLSLKEGRQ  120
            LREAR+ RD A+ALLA+G +P+V+R QKR A +LA+E TF +V+  W+ HR   LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  TTLSILPRIFDKDVLPALGKRSVYEIKRPDLLEVIAKIEKRKALSVAEKVRTWFNQLFRY  180
            +TLS + RIF+KDVLP+LGK S+Y+I+RP+LL V+A IEKRKA++ AEKVRTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIVPGLEQNPAADLDVVALPLPPVNHNPFLRMAELPKLLQRLRSYrgrr-qtqlglrl  239
            ALVI  GLE NPAADLDVVA P PPV HNP+L+++E+P +LQ+LR Y  R  QTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  llltgvrtgelrQAMPDQFDLDRGLWIIPPDVVKQLQLDMRKKRQQPKDIPPYIVPLSIQ  299
            L+LTGVRTGELR A P+QFDLDRGLWIIPP++VKQLQ +MRK  ++P+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AMEIVRHLLDEFKPAQRHLFRHDSDLKKRISENTLNGALKRMGYQERLTGHGIRGTMSTA  359
            A+EIVR LL+  +PAQR L+ H S+LKKRISENTLN A++ MGY+ RLTGHGIRGT+STA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNQVEAASM  419
            LNEIGYPK+WVDAQLSH DPNKVS++YNHA YVE RRRMMQDWADRLDL+EQ +VEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  PLTVHLEGVPAFPSEQTANAPSTPVAASPILLVTKPGDAMPLVSAAA-----HRLPAVPP  474
             LT++++GVPA +  + +  ++  +A +    V     +  +V++++     +RL+ VPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  PRSAAPLVP-SDIQRERMELFDVFEAPHNLPVAAFAKMAGKSRRWISYEIKAGNLLALNV  533
            P + AP    S IQRER E++ ++E+P +LPV+ F+K+AGKS+  I+ E+KAG+LL++++
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  534  GNRGQRVPDWHLDPLKHELIQSVLKLTRGADPWQIYHALLQPRSMLRGHSALEGVTASNL  593
            GNRGQRVPDW+L PLKH L Q +++    AD+W++Y+ L QP++ L +++A+++VT++N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

25) Ajs_1977 in NC_008782


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  569 bits (2148),  Expect = 2e-163, Method: Compositional matrix adjust.
 Identities = 367/607 (61%), Positives = 492/607 (82%), Gaps = 7/607 (1%)

Query  1    MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVT  60
            MALSDL+VRQAK+TGK YTL+D D L+L V+AAGG++W+FRYYW GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARSLRDEARALLAKGTNPRVHRKQKRTAVRLADENTFEAVYRKWLKHRGLTLKEGRQ  120
            LREAR+ RD A+ALLA+G +P+V+R QKR A +LA+E TF +V+  W+ HR   LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  TTLSILPRIFDKDVLPTLGKRSIYEIKRPDLLEVIAKIEKRRALSVAEKVRTWFNQLFRY  180
            +TLS + RIF+KDVLPTLGK SIY+I+RP+LL V+A IEKR+A++ AEKVRTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIVPGLEQNPASDLDVVALPLPPVNHNPFLRMAELPKLLQRLRSYrgrr-qtqlglrl  239
            ALVI  GLE NPA+DLDVVA P PPV HNP+L+++E+P +LQ+LR Y  R  QTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  llltgvrtgelrQATPDQFDLDRGLWIIPPDVVKQLQLDMRKKRQQPKDIPPYIVPLSIQ  299
            L+LTGVRTGELR A P+QFDLDRGLWIIPP++VKQLQ +MRK  ++P+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AMEIVRHLLDEFKPAQRHLFRHDSDLKKRISENTLNGALKRMGYQERLTGHGIRGTMSTA  359
            A+EIVR LL+  +PAQR L+ H S+LKKRISENTLN A++ MGY+ RLTGHGIRGT+STA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNQVEAASM  419
            LNEIGYPK+WVDAQLSH DPNKVS++YNHA YVE RRRMMQDWADRLDL+EQ +VEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  PLTVHLEGVPAFPNEQtasapstpvaaspILLVTKPGDAMPLVSAAA-----HRLPAVPP  474
             LT++++GVPA ++ + +  ++  +A +    V     +  +V++++     +RL+ VPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  PRSAAPLVP-SDIQRERMELFDVFEAPHNLPVAAFAKMAGKSRRWISYEIKAGNLLALNV  533
            P + AP    S IQRER E++ ++E+P +LPV+ F+K+AGKS+  I+ E+KAG+LL++++
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  534  GNRGQRVPDWHLDPLKHELIQSVLKLTRGADPWQIYHALLQPRSMLRGRSALEGVTASNL  593
            GNRGQRVPDW+L PLKH L Q +++    AD+W++Y+ L QP++ L +R+A+++VT++N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  594  DKLVMAV  600
              ++  +
Sbjct  601  PAIIRVI  607

26) BN117_0506 in NC_018828


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  568 bits (2146),  Expect = 2e-163, Method: Compositional matrix adjust.
 Identities = 366/607 (61%), Positives = 491/607 (81%), Gaps = 7/607 (1%)

Query  7    MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVT  66
            MALSDL+VRQAK+TGK YTL+D D L+L V+AAGG++W+FRYYW GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  67   LREARSLRDEARALLAKGTNPRVHRKQKRTAVRLADENTFEAVYRKWLKHRGLSLKEGRQ  126
            LREAR+ RD A+ALLA+G +P+V+R QKR A +LA+E TF +V+  W+ HR   LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  127  TTLSILPRIFDKDVLPALGKRSIYEIKRPDLLEVIAKIEKRRALSVAEKVRTWFNQLFRY  186
            +TLS + RIF+KDVLP+LGK SIY+I+RP+LL V+A IEKR+A++ AEKVRTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  187  ALVIVPGLEQNPASDLDVVALPLPPVNHNPFLRMAELPKLLQRLRSYrgrr-qtqlglrl  245
            ALVI  GLE NPA+DLDVVA P PPV HNP+L+++E+P +LQ+LR Y  R  QTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  246  llltgvrtgelrQATPDQFDLDRGLWIIPPDVVKQLQLDMRKKRQQPKDIPPYIVPLSIQ  305
            L+LTGVRTGELR A P+QFDLDRGLWIIPP++VKQLQ +MRK  ++P+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  306  AMEIVRHLLDEFKPAQRHLFRHDSDLKKRISENTLNGALKRMGYQERLTGHGIRGTMSTA  365
            A+EIVR LL+  +PAQR L+ H S+LKKRISENTLN A++ MGY+ RLTGHGIRGT+STA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  366  LNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNQVEAASM  425
            LNEIGYPK+WVDAQLSH DPNKVS++YNHA YVE RRRMMQDWADRLDL+EQ +VEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  426  PLTVHLEGVPAFPSEQTasapsapvaaspILLVTKPGDAMPLVSAAA-----HRLPAVPP  480
             LT++++GVPA +  + +  ++  +A +    V     +  +V++++     +RL+ VPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  481  PRSAAPLVP-SDIQRERMELFDVFEAPHNLPVAAFAKMAGKSRRWISYEIKAGNLLALNV  539
            P + AP    S IQRER E++ ++E+P +LPV+ F+K+AGKS+  I+ E+KAG+LL++++
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  540  GNRGQRVPDWHLDPLKHELIQSVLKLTRGADPWQIYHALLQPRSMLRGRSALEGVTASNL  599
            GNRGQRVPDW+L PLKH L Q +++    AD+W++Y+ L QP++ L +R+A+++VT++N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  600  DKLVMAV  606
              ++  +
Sbjct  601  PAIIRVI  607

27) Mpe_A2408 in NC_008825


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  567 bits (2142),  Expect = 4e-163, Method: Compositional matrix adjust.
 Identities = 366/607 (61%), Positives = 492/607 (82%), Gaps = 7/607 (1%)

Query  1    MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVT  60
            MALSDL+VRQAK+TGK YTL+D D L+L V+AAGG++W+FRYYW GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARSLRDEARALLAKGINPRVHRKQKRTAVRLADENTFEAVYRKWLKHRGLSLKEGRQ  120
            LREAR+ RD A+ALLA+GI+P+V+R QKR A +LA+E TF +V+  W+ HR   LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  TTLSILPRIFDKDVLPTLGKRSVYEIKRPDLLEVIAKIEKRRALSVAEKVRTWFNQLFRY  180
            +TLS + RIF+KDVLPTLGK S+Y+I+RP+LL V+A IEKR+A++ AEKVRTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIVPGLEQNPASDLDVVALPLPPVNHNPFLRMAELPKLLQRLRSYrgrr-qtqlglrl  239
            ALVI  GLE NPA+DLDVVA P PPV HNP+L+++E+P +LQ+LR Y  R  QTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  llltgvrtgelrQATPDQFDLDRGLWIIPPDVVKQLQLDMRKKRQQPKDIPPYIVPLSIQ  299
            L+LTGVRTGELR A P+QFDLDRGLWIIPP++VKQLQ +MRK  ++P+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AMEIVRHLLDEFKPAQRHLFRHDSDLKKRISENTLNGALKRMGYQERLTGHGIRGTMSTA  359
            A+EIVR LL+  +PAQR L+ H S+LKKRISENTLN A++ MGY+ RLTGHGIRGT+STA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNQVEAASM  419
            LNEIGYPK+WVDAQLSH DPNKVS++YNHA YVE RRRMMQDWADRLDL+EQ +VEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  PLTVHLEGVPAFPNEQtasapstpvaaspILLVTKPGDAMPLVSAAA-----HRLPAVPP  474
             LT++++GVPA ++ + +  ++  +A +    V     +  +V++++     +RL+ VPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  PRSAAPLVP-SDIQRERMELFDVFEAPHNLPVAAFAKMAGKSRRWISYEIKAGNLLALNV  533
            P + AP    S IQRER E++ ++E+P +LPV+ F+K+AGKS+  I+ E+KAG+LL++++
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  534  GNRGQRVPDWHLDPLKHELIQSVLKLTRGADPWQIYHALLQPRSMLRGHSALEGVTAGNL  593
            GNRGQRVPDW+L PLKH L Q +++    AD+W++Y+ L QP++ L +++A+++VT+ N+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  594  DKLVMAV  600
              ++  +
Sbjct  601  PAIIRVI  607

28) A458_06740 in NC_018028


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  561 bits (2118),  Expect = 4e-161, Method: Compositional matrix adjust.
 Identities = 364/607 (60%), Positives = 489/607 (81%), Gaps = 7/607 (1%)

Query  1    MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVT  60
            MALSDL+VRQAK+TGK YTL+D D L+L V+AAGG++W+FRYYW GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LREARSLRDEARALLAKGTNPRVHRKQKRTAVRLADENTFEAVYRKWLKHRGLSLKEGRQ  120
            LREAR+ RD A+ALLA+G +P+V+R QKR A +LA+E TF +V+  W+ HR   LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  TTLSILPRIFDKDVLPTLGKQSIYEIKRPDLLEVIARIEKRRALSVAEKVRTWFNQLFRY  180
            +TLS + RIF+KDVLPTLGK SIY+I+RP+LL V+A IEKR+A++ AEKVRTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVIVPGLEQNPAFDLDVVALPLPPVNHNPFLRMAELPRLLQRLRSYrgrr-qtqlglrl  239
            ALVI  GLE NPA DLDVVA P PPV HNP+L+++E+P +LQ+LR Y  R  QTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  llltgvrtgelrQAMPDQFDLDRGLWIIPPDVVKQLQLDMRKKRQQPKDIPPYIVPLSIQ  299
            L+LTGVRTGELR A P+QFDLDRGLWIIPP++VKQLQ +MRK  ++P+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AMEIVGHLLDEFKPAQRYLFRHDSDLKKRISENTLNGALKRMGYQERLTGHGIRGTMSTA  359
            A+EIV  LL+  +PAQRYL+ H S+LKKRISENTLN A++ MGY+ RLTGHGIRGT+STA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNQVEAASM  419
            LNEIGYPK+WVDAQLSH DPNKVS++YNHA YVE RRRMMQDWADRLDL+EQ +VEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  PLTVHLEGVPAFPSEQtasapstpvaaspsLLVTKPGDAMPLVSAAA-----HRLPAVPP  474
             LT++++GVPA +  + +  ++  +A + +  V     +  +V++++     +RL+ VPP
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  QRSAAPLVP-SDIQRERMDLFDVFEAPHNLPVAAFAKMAGKSRRWISYEIQAGNLLALNV  533
              + AP    S IQRER +++ ++E+P +LPV+ F+K+AGKS+  I+ E++AG+LL++++
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  534  GNRGQRVPDWHLDPLKHELIQSVLKLTRGADPWQIYHALLQPRSMLRGRSALEGVTASNF  593
            GNRGQRVPDW+L PLKH L Q +++    AD+W++Y+ L QP++ L +R+A+++VT++N 
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  594  DKLVMAV  600
              ++  +
Sbjct  601  PAIIRVI  607

29) PSF113_3288 in NC_016830


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  543 bits (2048),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 357/607 (59%), Positives = 477/607 (79%), Gaps = 1/607 (0%)

Query  1    MALSEMAVRHARITGNDYTLGDSDGLTLNVTARGGKVWLFRYYWAGVQKRMSLGSYPQIS  60
            MALS+++VR+A+ TG+ YTL+D+D L L V+A GGK W FRYYW G QKR+ LG+YP +S
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LKEARVRRDEARALVAQGINPYEHRKQQRLAVHAAKEHTFEAVFNQWVEFRRLSLKEGRQ  120
            L+EAR  RD A+AL+A+GI+P  +R Q+R A   A E TF +VF+ WVE RR  LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFSKDVLPMLGGRSIYDINRHDLLDLLSRIEQRKALTTAEKCRTWFNQLFRY  180
            STLSQILRIF+KDVLP LG  SIYDI R +LL++L+ IE+RKA+TTAEK RTWFNQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVKIEGLEHNPASDLDVVAFPKPPVTHNPFLRMDELPALMAALRNYGGAN-Qtrlglrl  239
            ALV  EGLE NPA+DLDVVA PKPPV+HNP+L++ E+P ++  LR Y     QT+LG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  llltgvrtgelrlATPDQFDLEKRLWVIPAEVVKQLQLAMRKPGKQTQNVPPYIVPLSVQ  299
            L+LTGVRTGELRLA P+QFDL++ LW+IP+++VKQLQ  MRK+GK+ Q+VPPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  ALEIVRHLLDQVVPAQRYLFAHRSDLSKRISENTLNGALRRMGYADQLTGHGMRATISTA  359
            A+EIVR LL+ + PAQRYL++HRS+L KRISENTLN A++ MGY ++LTGHG+R+TISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKVWVDAQLSHADPDKVSAAYNHAEYVEQRRTMMQDWANRLDLWGQGQLKAASS  419
            LNEIGYPK+WVDAQLSH+DP+KVS++YNHA YVE RR MMQDWA+RLDL  QG++ AAS+
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  PLTIRlegaaslpslesasaNSIQFNGIFPMTTVSVPKASVSGEPALIVPHQSPVVPLSV  479
             LTIR++G ++++ +E +   ++      P    +V  +++   P+        +  ++ 
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  480  PTEMPHKSHVSDIQRERAEMLAIYEAASNLPLIVFAKLAGKSRDQINRDIKArrllslsl  539
            P   +  ++VS IQRER EML+IYE++S+LP+ +F+KLAGKS+DQINR++KA +LLS+SL
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  540  GNRGQRIPDWQLDPLRHKLVLAALARFPDTGAWRLYRAVCEPHERLKRRAPIDVLTPENF  599
            GNRGQR+PDWQL PL+HKL    + +  ++++W LYR + +PH  L  RA+ID +TP N 
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  600  DATVRIV  606
             A +R++
Sbjct  601  PAIIRVI  607

30) DSC_03650 in NC_016147


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  543 bits (2048),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 342/609 (57%), Positives = 468/609 (77%), Gaps = 12/609 (1%)

Query  1    MALSDVAVRQAKATGTDYTLPDFDGLSLAVSAAGTKTWHFRYTWLGRQKRMSLGVYPEIS  60
            MALSD++VRQAK+TG  YTL+D D L+L VSAAG K+W+FRY WLG+QKR+ LG YP +S
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LreartrrdearaLVAKDINPQRQRTRDRQLATQAEQNTFQAVYEKWLKFREQGRLKRGR  120
            LREART RD A+AL+A++I+PQ +R + R+ A  A + TF++V++ W+  R +  LK GR
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKE-LKEGR  119

Query  121  QTTLATLPRIFGNDVLPTLGKRSIHVITRADLLEIVGRIEKRGAPSVAEKVRTWLNQLFR  180
            Q+TL+ + RIF +DVLPTLGK SI  I R++LL +++ IEKR A + AEKVRTW+NQ+FR
Sbjct  120  QSTLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFR  179

Query  181  YALVVVPGLERNPASDLDVVAMPQPPVRHNPFLRMSELPEFLQLLRKYPGRL-QTQLGVR  239
            YALV+  GLE NPA+DLDVVA P+PPV HNP+L+++E+PEFLQ LR Y  R  QTQLGVR
Sbjct  180  YALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVR  239

Query  240  MLFLTGVRTGELRLATPDQFHLDDGLWIIPPDVVKQLELKMQKENLRTEDIPPYIVPLSL  299
            +LFLTGVRTGELRLA P+QF+LD GLWIIPP++VKQL+  M+K   R +D+PPYIVPLSL
Sbjct  240  LLFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSL  299

Query  300  QAVEIVRHMLERFKQGQKHVFPGAKSLKQRISENTLNTAVKRLGYDGRLTGHGIRATLST  359
            QA+EIVR +L   + +Q+ +++    LK+RISENTLN AV+ +GY+GRLTGHGIR+T+ST
Sbjct  300  QAIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTIST  359

Query  360  TLNELGYPDKWIDAQLSHVDPNPVRRTYNHAEYVEQRRCMMQDWADRLDLLEQGQLEAAS  419
            +LNE+GYP  W+DAQLSH DPN V  +YNHA YVE RR MMQDWADRLDLLEQG++EAAS
Sbjct  360  ALNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAAS  419

Query  420  NPLALHLEGLPMAGDGSNTQGSPASTTVQTLVLSKPHD------APPQGAIQMQRLSAVR  473
              L+++++G+P  ++  +T ++  + +  T     P        +P+ G+I  QRLS V 
Sbjct  420  AHLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVP  479

Query  474  APKTEPT---ISNVQRERMILLDILESPHNLSVADYAKLAGKSRRWITYEVTAGNLLSIS  530
            +P T++    +S +QRER  +L I ESP +L+V+ ++KLAGKS+  I  E+ AG+LLSIS
Sbjct  480  PPPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSIS  539

Query  531  LGNRGQRVPDWQLDPLKRRLVQTILKQTARGVDPWEIYHALTQPYDEFGGQSPIEAVTLE  590
            LGNRGQRVPDWQL PLK++L Q +++Q  ++ D+W++Y+ LTQP  ++G++++I+AVT  
Sbjct  540  LGNRGQRVPDWQLVPLKHKLAQVLMNQCLHA-DSWDLYRMLTQPHPDLGDRAAIDAVTPT  598

Query  591  TLEMAVQVV  599
             +   ++V+
Sbjct  599  NVPAIIRVI  607

31) PputW619_3372 in NC_010501


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  543 bits (2050),  Expect = 8e-156, Method: Compositional matrix adjust.
 Identities = 340/612 (56%), Positives = 466/612 (77%), Gaps = 21/612 (3%)

Query  1    MALTEMAIRHARVTAKEYTLADSDGLFLNVTAQGSKIWHFRYYWEGRQKRMSFGSYPQVG  60
            MAL+++++R+A+ T+K YTL+D+D L L V+A G+K W+FRYYW G+QKR+ +G+YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   LrdarerrdearaLIAQGFNPCEQRKQQRVALRLANDQTFDAVFEQWIAFRRLSLKEGRQ  120
            LR+AR  RD A+AL+A+G++P  +R Q+R A +LA + TF +VF+ W+  RR  LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLSQILRIFAKDIQPYIGEQSIHEINRHVLMDLLSRIECRKAFTTAEKCRTWLNQLFRY  180
            STLSQILRIF KD+ P +G  SI +I R  L+++L+ IE RKAFTTAEK RTW+NQ+FRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVRIAGLEHNPAADLDVVAVPKPPVEHNPFLRMEELPHFLGKLRAFRGSQ-QTQLGIRL  239
            ALV   GLE NPAADLDVVA PKPPV HNP+L++ E+P+FL KLR +     QTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  LLLTGVRTGELRLATPDQFDLERRLWIIPPEVVKQLQLKMRNTRRQTAKVPPYIVPLSIQ  299
            L+LTGVRTGELRLA P+QFDL+R LWIIPP++VKQLQ  MR++ ++   VPPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AAEVVRLLLDQVVPAQRHLLTHRSDLSKRISENTLNSALRRMGFADRLTGHGVRATISTA  359
            A E+VR LL+ + PAQR LL+HRS+L KRISENTLN A++ MG+ +RLTGHG+R+TISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKIWIDAQLSHADPDKVSSAYNHAEYVEQRRTMMQDWANRLDLWVQGHTKAAAS  419
            LNEIGYPKIW+DAQLSH+DP+KVSS+YNHA YVE RR MMQDWA+RLDL  QG+  AA++
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  PLTIRLEGVsqlsfglqslllPPVRSGMKPEMSSLDVEGSKALADRFGASEVSAVRL---  476
             LTIR++GV+ ++   +++      +   P   +  V  +  ++   +++ ++  RL   
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTP--SSGGITFQRLSQV  478

Query  477  -----------VSDIQRERAEMLEIYEAATNLPLLSFARLAGKSRDQINRDIKArrllsl  525
                       VS IQRER EML IYE++++LP+  F++LAGKS+DQINR++KA +LLS+
Sbjct  479  PPPPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSI  538

Query  526  slGNRGQRIPDWQLDPVKHKLVLAIFKSLPQLEAWEVYRLLSEPHDRLRGRIPLDVVQTE  585
            SLGNRGQR+PDWQL P+KHKL   + +   + ++W++YR+L++PH  L +R ++D V   
Sbjct  539  SLGNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTP-  597

Query  586  NFETTLASLIRV  597
               T ++++IRV
Sbjct  598  ---TNVPAIIRV  606

32) intB13 in NC_010170


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  540 bits (2037),  Expect = 9e-155, Method: Compositional matrix adjust.
 Identities = 363/612 (60%), Positives = 484/612 (80%), Gaps = 20/612 (3%)

Query  1    MALSDMAARNAKATGKAYTISDIDGLSLAVSPTGGKTWHYRYYWAGKQKRMSLGTYPEVG  60
            MALSD++ R+AK+TGK YT+SD D L+L VS++GGK+W++RYYW GKQKR+ LG YP ++
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   lrearglrdaarallaKGINPRADRKQKRQAVRLADEHTFQAVFDKWVEHRRLVLKEGRQ  120
            LREAR  RD A+ALLA+GI+P+ +R QKR+A +LA+E TF++VFD WVEHRR  LKEGRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  STLTQILRIFKKDILPTLGKRPVYEIQRPDLLEVVAKIERRKALSVAEKVRTWFRQMFRY  180
            STL+QILRIF+KD+LPTLGK ++Y+I+RP+LL V+A IE+RKA++ AEKVRTWF QMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALIIVPGLPQNPAFDLDVVALPMPPVRHNPFLRMDELPAMLSRLRKYHgrl-qtqlglrl  239
            AL+I  GL  NPA DLDVVA P PPV HNP+L++ E+P  L +LR Y+ R  QTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  lfltgvrtgELRLATPDQFHLDQGLWIIPPEVVKQLQLEMRKEGKRPGDIPPYIVPLSAQ  299
            LFLTGVRTGELRLA P+QF+LD+GLWIIPP++VKQLQ EMRK GKRP D+PPYIVPLS Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AMEIVQHMLEQFKPAQRYLFSHGWDLKKRISENTLNQALKRMGYTDQLTGHGIRATISTA  359
            A+EIV+ +L   +PAQRYL+SH  +LKKRISENTLN+A++ MGY ++LTGHGIR+TISTA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKVWVDAQLSHSDPDKVSAAYNHAEYVEQRRRMMQDWADRLDLFEQHQVEAASM  419
            LNEIGYPK+WVDAQLSHSDP+KVS++YNHA YVE RRRMMQDWADRLDL+EQ +VEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  HLTVHLegvpevpdevpegaeaaippa-----------piVLVSKPGAGMPTLPDSVHRL  468
            HLT++++GVP +++       +   +              ++V+ +++G+     + +RL
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGI-----TFQRL  475

Query  469  SAITGPRTPPV---LSESQREQLERLDIFNSPHLLSAADFAKMAGKSRRWISYEISGRKM  525
            S +  P T +    +S  QRE+ E L I++SP  L+ + F+K+AGKS+  I+ E+ + K+
Sbjct  476  SQVPPPPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKL  535

Query  526  LALSLGNLGQRVPDWHFTPLKHKLIQAVLKFAREADSWEIYRALSQPHDDFKGLAPVDAV  585
            L++SLGN GQRVPDW++ PLKHKL Q +++   +ADSW++YR L+QPH D+ + A++DAV
Sbjct  536  LSISLGNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAV  595

Query  586  TAENLHEVVMAV  597
            T+ N+  ++  +
Sbjct  596  TPTNVPAIIRVI  607

33) int in NC_006513


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  535 bits (2020),  Expect = 2e-153, Method: Compositional matrix adjust.
 Identities = 333/624 (54%), Positives = 476/624 (77%), Gaps = 11/624 (1%)

Query  2    LTDMTVRQAKATGKLYTIADFDGLCLHISAVGGKAWHFRYTWMGQRARISLGSYPelslr  61
            L+D+TVRQAK+TGK YT++D D L L +SA GGK+W+FRY W+G++ R+ LG+YP LSLR
Sbjct  3    LSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALSLR  62

Query  62   earelrdaarsllarGINPRTDRKQKRHAIRLAGENTFMAVYEKWMEHRQLTLEEGRQSS  121
            EAR  RD A++LLARGI+P+ +R QKRHA +LAGE TF +V++ W+EHR+  L EGRQS+
Sbjct  63   EARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQST  122

Query  122  LEQIRRVFRKDVFPFLKRLTIYEITRPHLLEVIGRIEKRNSLSVAEKVRTWLKQLFDYAM  181
            L QI R+F KDV+P L +++IY+I RP+LL V++ IEKR++++ AEKVRTW++Q+F YA+
Sbjct  123  LSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYAL  182

Query  182  VVISGMETHPATDLHVVAVPLPPVEHNPFLRMAELPEFLQTLRKYRGML-KTQLAIRLLL  240
            V+  G+E +PA+DL+VVA P PPV HNP+L+++E+PEFLQ LR Y     +TQL++RLL+
Sbjct  183  VIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRLLF  242

Query  241  LTGVRTGELRLATPDQFDLDRRLWIIPVMSLKQRKMLTRKKRRRVTDIPPYIVPLSVQAI  300
            LTGVRTGELRLA P+QFDLDR LWIIP   +KQ +   RK  +R  D+PPYIVPLS+QAI
Sbjct  243  LTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQAI  302

Query  301  EIVRYLLEDVKPVQKHLFAGVKRLTDRMSENTVNVALKRLGYDDRLTGHGLRATISTALN  360
            EIVRYLL  ++P Q+ L++    L  R+SENT+N A++ +GY++RLTGHG+R+TISTALN
Sbjct  303  EIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALN  362

Query  361  ELGYPKVWVDSQLSHADPNRISATYNHAEYVEQRRVMMQDWADRLDLFEQNQVQVASMHL  420
            E+GYPK+WVD+QLSH+DPN++S++YNHA YVE RR MMQDWADRLDL+EQ +V+ AS HL
Sbjct  363  EIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASAHL  422

Query  421  TIHLQGLPTIAGQETT---PLPTPGQHAPILLVASTERSVPTVTPAT---QRLSAV--EM  472
            TI+++G+P++A  E T    L  +   +P +    +   V T +++    QRLS V    
Sbjct  423  TIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPPPP  482

Query  473  PEYARPKLSDLQHERLKLLEIFEGPDNLVVADYANLAGKSRRWITYEIQTGNLLSIQLGN  532
             + + P +S +Q+ER  +L I+E+P +L V+ +++LAGKS+  I  E+++G+LLSI LGN
Sbjct  483  THAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLGN  542

Query  533  KGQRVPVWQLDPLKRQLVQAILRQTPRGVDTWDIYHALLRPHDALGNRSPVDAVTPENMK  592
            +GQRVP WQL PLK++L Q ++ Q  ++ D+WD+Y+ L +PH  LG+R+++DAVTP N+ 
Sbjct  543  RGQRVPDWQLVPLKHKLAQVLMNQCLHA-DSWDLYRMLTQPHPDLGDRAAIDAVTPTNVP  601

Query  593  IAVRVVVEQCSQQVETLAP-THYP  615
              +RV++ +  ++ +   + + YP
Sbjct  602  AIIRVIMGDYQHHADMPEAIAPYP  625

34) Rpic12D_0697 in NC_012856


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  529 bits (1995),  Expect = 2e-151, Method: Compositional matrix adjust.
 Identities = 358/607 (59%), Positives = 482/607 (80%), Gaps = 6/607 (0%)

Query  1    MALSDLVVRQAKATGKAYTLPDIDGLSLAVTTTGSKSWHFRYYWMKEPKRMSLGTYPEVS  60
            MALSDL VRQAK+TGK YTL+D D L+L V+++G+KSW+FRYYW+   KR+ LG YP +S
Sbjct  1    MALSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALS  60

Query  61   lrearalrdearalVAKDINPRLHRKQKRAAVKLAGENTFEAIYKKWLAHRELGLKKGRQ  120
            LREAR+ RD A+AL+A++I+P+++R QKR A KLAGE TF +++  W+ HR   LK GRQ
Sbjct  61   LREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQ  120

Query  121  TTLSILPRVFAKDVLPLLGKRSIYDIKRPDLLEVIARIERRKALSVAEKVRTWFNQMFRY  180
            +TLS + R+F KDVLP LGK SIYDI+RP+LL V+A IE+RKA++ AEKVRTWFNQMFRY
Sbjct  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY  180

Query  181  ALVVVPGLEQNPASDLDVVALPLPPVNHNPFLRMAELPKLLQRLRKYrgrl-qtqlglrl  239
            ALV+  GLE NPA+DLDVVA P PPV HNP+L+++E+P +LQ+LR Y  R  QTQLG+RL
Sbjct  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRL  240

Query  240  llftgvrtgELRLATPDQFDLDRGLWIIPPEVVKQLQVDMRRKRQLPKDIPPYIVPLSVQ  299
            L++TGVRTGELRLA P+QFDLDRGLWIIPP++VKQLQ +MR+  + P+D+PPYIVPLS+Q
Sbjct  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300

Query  300  AIEIVRHLLEQFKPAQHYLFRHDSELKKRMSENTLNGALKRMGYRDLLTGHGIRGTMSTA  359
            AIEIVR LL   +PAQ+YL+ H SELKKR+SENTLN A++ MGY + LTGHGIRGT+STA
Sbjct  301  AIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360

Query  360  LNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNMVEAASM  419
            LNEIGYPK+WVDAQLSH DPNKVS++YNHA YVE RRRMMQDWADRLDL+EQ  VEAAS 
Sbjct  361  LNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420

Query  420  PLTIHLEGVPVLSDEEaasappkaaatsapLLIVTKPGDAMPLVSAET----HRLPAV-P  474
             LTI+++GVP +++ E +  +  + A ++P  +    + ++ + ++      +RL+ V P
Sbjct  421  HLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPP  480

Query  475  LPRSVMEEPLSDIQRQRMELVDVFEAPHNLPVAEYAKMAGKSRRWISYEIKagnllalnl  534
             P    E  +S IQR+R E++ ++E+P +LPV+ ++K+AGKS+  I+ E+KAG+LL+++L
Sbjct  481  PPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISL  540

Query  535  gnRGQRVPDWHLDPVKHALIQAVLKLTRGADPWQIYNALLQPRAMLRGRSALESVSATNL  594
            GNRGQRVPDW+L P+KH L Q +++    AD+W++Y  L QP++ L +R+A+++V++TN+
Sbjct  541  GNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  595  DKIIMAV  601
              II  +
Sbjct  601  PAIIRVI  607

35) Alide2_1967 in NC_015422


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  521 bits (1964),  Expect = 6e-149, Method: Compositional matrix adjust.
 Identities = 324/609 (54%), Positives = 455/609 (75%), Gaps = 10/609 (1%)

Query  2    LSDLMVRQAKATGNTYTLADSDGLSLFVSANGAKAWHFRFTWGGKRDRMSFGSYPALSLK  61
            LSDL VRQAK+TG+ YTL+D+D L+L VSA G+K+W+FR+ W GK+ R+ +G+YPALSL+
Sbjct  3    LSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALSLR  62

Query  62   EARELRDEARNLLAKGVNPHSERKRKRHAIVLAGEHTFQAVYDQWLAHRRLSLEEGRQTS  121
            EAR  RD A+ LLA+G++P+ ER +KRHA  LAGE TF++V+D W+ HRR  L EGRQ++
Sbjct  63   EARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQST  122

Query  122  LEQIARVFKKDVFPVLRHLTIYDITRAHLLDIIGKVEKRGSLSVAEKLRTWFTQLFTYAT  181
            L QI R+F+KDV+P L  ++IYDI R++LL++++ +EKR +++ AEK+RTWF Q+F YA 
Sbjct  123  LSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYAL  182

Query  182  VAIPNMHDNPSKDLEVVALPLPPVDHNPFLRMPELPIMLQTLRKYRGRL-NTQLGLRLLM  240
            V    ++ NP+ DL+VVA P PPV HNP+L++PE+P  LQ LR Y  R  +TQLG+RLL 
Sbjct  183  VIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRLLF  242

Query  241  LTGVRTGELRFATPDQFDLEQGLWIIPVArlkqralltkkkrkrlVDIPPYIVPLPVQAQ  300
            LTGVRTGELR+A P+QFDL++GLWIIP   +KQ     +K  KR  D+PPYIVPL++QA 
Sbjct  243  LTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQAI  302

Query  301  EIVRHLLDQCKPAQVYLIPGDWCLKHPVSENTFNGALKRMGYEDQLTGHGIRATISTALN  360
            EIVR LL+  +PAQ YL++    LK  +SENT+N A++ MGYE++LTGHGIR+TISTALN
Sbjct  303  EIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALN  362

Query  361  ELGYPKKWVDAQLSHADPDKISATYNHAEYVEQRRVMMQDWADRLDLFEQNQVEVASRHL  420
            E+GYPK WVDAQLSH+DP+K+S++YNHA YVE RR MMQDWADRLDL+EQ +VE AS HL
Sbjct  363  EIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASAHL  422

Query  421  TITLQGLPTIAGQAAVQPPVVDLTA------PQLIVtaptpdmpaapaSVQRLSAVRMPE  474
            TI ++G+P++A       + + ++       P ++ T+     +++  + QRLS V  P 
Sbjct  423  TIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPPPP  482

Query  475  YARPR--LSEVQRERLRVLETFEAPHNLSVADYAKLAGKSRRWITYEIQAGNLLSIHMGN  532
               P   +S +QRER  +L  +E+P +L+V+ ++KLAGKS+  I  E++AG+LLSI +GN
Sbjct  483  THAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLGN  542

Query  533  RGQRMPDWQLDPLKRRLVQFVLKQVPRGLDTWAIYHALLQPYDALGGRSAIEAVNPKNLH  592
            RGQR+PDWQL PLK++L Q +++Q  ++ D+W +Y+ L QP   LG+R+AI+AV P N+ 
Sbjct  543  RGQRVPDWQLVPLKHKLAQVLMNQCLHA-DSWDLYRMLTQPHPDLGDRAAIDAVTPTNVP  601

Query  593  LAARLVAAQ  601
               R++ ++
Sbjct  602  AIIRVIMGD  610

36) XC_1018 in NC_007086


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  521 bits (1964),  Expect = 6e-149, Method: Compositional matrix adjust.
 Identities = 318/607 (53%), Positives = 466/607 (77%), Gaps = 12/607 (1%)

Query  5    LTDMVVRQAKASDKPYTLADFDGLFLYVSPVGGKAWHFRYTWVGQRARISLGSYPELSLR  64
            L+D+ VRQAK+++K YTL+D D L L VS+ GGK+W+FRY W+G++ R+ LG+YP LSLR
Sbjct  3    LSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALSLR  62

Query  65   DAREFRDQARALVAKGINPRTDRKQKRQAIRLAGENTFMAVYEKWMEHRQLTLEEGRQSS  124
            +AR  RD+A+AL+A+GI+P+ +R QKR+A +LAGE TF +V++ W+EHR+  L EGRQS+
Sbjct  63   EARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQST  122

Query  125  LEQIRRVFKKDVFPYLKRYTIYEITRPVLLEVIGRIEKRESLSVAEKVRTWLKQLADYAM  184
            L QI R+F+KDV+P L + +IY+I RP LL V++ IEKR +++ AEKVRTW++Q+  YA+
Sbjct  123  LSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYAL  182

Query  185  VVIPGMVEHPAIDLHVVAVPLPPVEHNPFLRMPELPLFLQTLRKYRGMQ-MTQLAIRLLL  243
            V+  G+  +PA DL+VVA P PPV HNP+L++PE+P FLQ LR Y      TQL++RLL+
Sbjct  183  VIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRLLF  242

Query  244  LTGVRTGELRLATPDQFDLEQGLWIIPVMSLkqrkmltkkkrkrVTDIPPYIVPLPVQAI  303
            LTGVRTGELRLA P+QFDL++GLWIIP   +KQ +   +K  KR  D+PPYIVPL++QAI
Sbjct  243  LTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQAI  302

Query  304  EIVRHMLDLFKPAQTYLFPGVKRITARMSENTVNRAIKRLGYDGRLTGHGIRATISTALN  363
            EIVR +L++ +PAQ YL++    +  R+SENT+N+A++ +GY+GRLTGHGIR+TISTALN
Sbjct  303  EIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALN  362

Query  364  ELGYPKVWVDAQLSHADPNRISATYNHAEYVEQRRLMMQDWADRLDLFEQNQVQIASTHL  423
            E+GYPK+WVDAQLSH+DPN++S++YNHA YVE RR MMQDWADRLDL+EQ +V+ AS+HL
Sbjct  363  EIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASAHL  422

Query  424  TIHLQGVPTIA--GQKVTPLPALGQHAPIMLVAPNEQTM----PAVGTGTQRLSAV--QM  475
            TI+++GVP++A   + + +  ++++ +P  + +     +    ++ G   QRLS V    
Sbjct  423  TIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPPPP  482

Query  476  PEYALPKISEVQRERLEVLDIFEGPDNLVVADYAKLAGKSRRWITYEIQARNLLSIQLGN  535
             + + P +S +QRER E+L I+E+P +L V+ ++KLAGKS+  I  E++A +LLSI LGN
Sbjct  483  THAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLGN  542

Query  536  KGQRVPVWQLNMFKRRLVQAVLKR-LHRGVDTWDIYYALTRPREELDGKSPIEALTSDNQ  594
            +GQRVP WQL  +K++L Q ++++ LH   D+WD+Y  LT+P+ +L+++++I+A+T+ N 
Sbjct  543  RGQRVPDWQLVPLKHKLAQVLMNQCLH--ADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  595  QAMVEAV  601
             A++  +
Sbjct  601  PAIIRVI  607

37) intS in NC_003902


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  521 bits (1964),  Expect = 6e-149, Method: Compositional matrix adjust.
 Identities = 318/607 (53%), Positives = 466/607 (77%), Gaps = 12/607 (1%)

Query  5    LTDMVVRQAKASDKPYTLADFDGLFLYVSPVGGKAWHFRYTWVGQRARISLGSYPELSLR  64
            L+D+ VRQAK+++K YTL+D D L L VS+ GGK+W+FRY W+G++ R+ LG+YP LSLR
Sbjct  3    LSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALSLR  62

Query  65   DAREFRDQARALVAKGINPRTDRKQKRQAIRLAGENTFMAVYEKWMEHRQLTLEEGRQSS  124
            +AR  RD+A+AL+A+GI+P+ +R QKR+A +LAGE TF +V++ W+EHR+  L EGRQS+
Sbjct  63   EARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKELKEGRQST  122

Query  125  LEQIRRVFKKDVFPYLKRYTIYEITRPVLLEVIGRIEKRESLSVAEKVRTWLKQLADYAM  184
            L QI R+F+KDV+P L + +IY+I RP LL V++ IEKR +++ AEKVRTW++Q+  YA+
Sbjct  123  LSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYAL  182

Query  185  VVIPGMVEHPAIDLHVVAVPLPPVEHNPFLRMPELPLFLQTLRKYRGMQ-MTQLAIRLLL  243
            V+  G+  +PA DL+VVA P PPV HNP+L++PE+P FLQ LR Y      TQL++RLL+
Sbjct  183  VIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRLLF  242

Query  244  LTGVRTGELRLATPDQFDLEQGLWIIPVMSLkqrkmltkkkrkrVTDIPPYIVPLPVQAI  303
            LTGVRTGELRLA P+QFDL++GLWIIP   +KQ +   +K  KR  D+PPYIVPL++QAI
Sbjct  243  LTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQAI  302

Query  304  EIVRHMLDLFKPAQTYLFPGVKRITARMSENTVNRAIKRLGYDGRLTGHGIRATISTALN  363
            EIVR +L++ +PAQ YL++    +  R+SENT+N+A++ +GY+GRLTGHGIR+TISTALN
Sbjct  303  EIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALN  362

Query  364  ELGYPKVWVDAQLSHADPNRISATYNHAEYVEQRRLMMQDWADRLDLFEQNQVQIASTHL  423
            E+GYPK+WVDAQLSH+DPN++S++YNHA YVE RR MMQDWADRLDL+EQ +V+ AS+HL
Sbjct  363  EIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASAHL  422

Query  424  TIHLQGVPTIA--GQKVTPLPALGQHAPIMLVAPNEQTM----PAVGTGTQRLSAV--QM  475
            TI+++GVP++A   + + +  ++++ +P  + +     +    ++ G   QRLS V    
Sbjct  423  TIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPPPP  482

Query  476  PEYALPKISEVQRERLEVLDIFEGPDNLVVADYAKLAGKSRRWITYEIQARNLLSIQLGN  535
             + + P +S +QRER E+L I+E+P +L V+ ++KLAGKS+  I  E++A +LLSI LGN
Sbjct  483  THAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLGN  542

Query  536  KGQRVPVWQLNMFKRRLVQAVLKR-LHRGVDTWDIYYALTRPREELDGKSPIEALTSDNQ  594
            +GQRVP WQL  +K++L Q ++++ LH   D+WD+Y  LT+P+ +L+++++I+A+T+ N 
Sbjct  543  RGQRVPDWQLVPLKHKLAQVLMNQCLH--ADSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  595  QAMVEAV  601
             A++  +
Sbjct  601  PAIIRVI  607

38) PSTAB_1251 in NC_015740


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  496 bits (1872),  Expect = 9e-142, Method: Compositional matrix adjust.
 Identities = 327/557 (59%), Positives = 448/557 (81%), Gaps = 7/557 (1%)

Query  1    MSLGTYPEVTLREARSLRDEARALLAKGTNPRVHRKQKRTAVRLADENTFEAVYRKWLKH  60
            + LG YP ++LREAR+ RD A+ALLA+G +P+V+R QKR A +LA+E TF +V+  W+ H
Sbjct  51   LCLGGYPALSLREARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEH  110

Query  61   RGLSLKEGRQTTLSILPRIFDKDVLPALGKRSIYEIKRPDLLEVIAKIEKRRALSVAEKV  120
            R   LKEGRQ+TLS + RIF+KDVLP+LGK SIY+I+RP+LL V+A IEKR+A++ AEKV
Sbjct  111  RRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKV  170

Query  121  RTWFNQLFRYALVIVPSLEQNPASDLDVVALPLPPVNHNPFLRMAELPKLLQRLRSYrgr  180
            RTWFNQ+FRYALVI  +LE NPA+DLDVVA P PPV HNP+L+++E+P +LQ+LR Y  R
Sbjct  171  RTWFNQMFRYALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPR  230

Query  181  r-qtqlglrlllltgvrtgelrQATPDQFDLDRGLWIIPPDVVKQLQLDMRKKRQQAKDI  239
              QTQLG+RLL+LTGVRTGELR A P+QFDLDRGLWIIPP++VKQLQ +MRK  ++++D+
Sbjct  231  GWQTQLGVRLLFLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDV  290

Query  240  PPYIVPLSIQAMEIVRHLLDEFKPAQRHLFRHDSDLKKRISENTLNGALKRMGYQERLTG  299
            PPYIVPLS+QA+EIVR LL+  +PAQR L+ H S+LKKRISENTLN A++ MGY+ RLTG
Sbjct  291  PPYIVPLSLQAIEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTG  350

Query  300  HGIRGTMSTALNEIGYPKVWVDAQLSHVDPNKVSATYNHAQYVEQRRRMMQDWADRLDLF  359
            HGIRGT+STALNEIGYPK+WVDAQLSH DPNKVS++YNHA+YVE RRRMMQDWADRLDL+
Sbjct  351  HGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLL  410

Query  360  EQNQVEAASMPLTVHLEGVPAFPNEQtasapstpvaaspILLVTKPGDAMPLVSAAA---  416
            EQ +VEAAS  LT++++GVPA ++ + +  ++  +A +    V     +  +V++++   
Sbjct  411  EQGEVEAASAHLTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGI  470

Query  417  --HRLPAVPPPRSAAPLVP-SDIQRERMELFDVFEAPHNLPVAAFAKMAGKSRRWISYEI  473
              +RL+ VPPP + AP    S IQRER E++ ++E+P +LPV+ F+K+AGKS+  I+ E+
Sbjct  471  TFQRLSQVPPPPTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINREL  530

Query  474  KAGNLLALNVGNRGQRVPDWHLDPLKHELIQSVLKLTRGADPWQIYHALLQPRSMLRGRS  533
            KAG+LL++++GNRGQRVPDW+L PLKH L Q +++    AD+W++Y+ L QP++ L +R+
Sbjct  531  KAGKLLSISLGNRGQRVPDWQLVPLKHKLAQVLMNQCLHADSWDLYRMLTQPHPDLGDRA  590

Query  534  ALEGVTASNLDKLVMAV  550
            A+++VT++N+  ++  +
Sbjct  591  AIDAVTPTNVPAIIRVI  607

39) intB13 in NC_010170


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  468 bits (1763),  Expect = 4e-133, Method: Compositional matrix adjust.
 Identities = 328/645 (51%), Positives = 471/645 (74%), Gaps = 14/645 (2%)

Query  2    LSDLQVRQAKVTGKAYSLVDFDGLYFYISATGFKAWHFRFTWGGKRERMSFGGYPALSLK  61
            LSDL VRQAK TGK Y+L D D L + +SA+G K+W+FR+ W GK+ R+ +GGYPALSL+
Sbjct  3    LSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALSLR  62

Query  62   DARNLRDEARAMLAKGINPHSERKRKRHAIVLAGEHTFQAIYDKWLAHRSLSLENEGRQS  121
            +AR  RD A+A+LA+GI+P+ ER +KRHA  LAGE TF++++D W+ HR   L +EGRQS
Sbjct  63   EARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKEL-KEGRQS  121

Query  122  TPKQIGRVFAKDVFPVLRHLTIYDVTRAHLLDIIGRVEKRGSLSVAEKLRTWFSQLFTYA  181
            T  QI R+F KDV+P L  ++IYD+ R++LL++++ +EKR +++ AEK+RTWF+Q+F YA
Sbjct  122  TLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYA  181

Query  182  SVVVPNMGDNPAKDLDVVAMPLPPVENNPFLRMPELPAMLQTLRKYSgrl-ntqlglrll  240
             V+   +  NPA DLDVVA P PPV +NP+L++PE+P  LQ LR Y+ R  +TQLG+RLL
Sbjct  182  LVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRLL  241

Query  241  lltgvrtgelrYATPDQFDLERGLWIIPVVrlkqrkqltkkkrqrFADIPPYIVPLSLQA  300
            +LTGVRTGELR A P+QFDL+RGLWIIP   +KQ ++  +K  +R  D+PPYIVPLSLQA
Sbjct  242  FLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQA  301

Query  301  QEVVRHLLGNLKPAQVYLIPGDWCLKNPLSENTLNGALKRMGYEDQLTGHGVRATISTAL  360
             E+VR LLG ++PAQ YL++    LK+ +SENTLN A++ MGYE++LTGHG+R+TISTAL
Sbjct  302  IEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTAL  361

Query  361  NELGYPPKWVDAQLSHADPDRISATYNHAEYVEQRRVMMQDWADRLDLFEQNQVEVASTH  420
            NE+GYP  WVDAQLSH+DP+++S++YNHA YVE RR MMQDWADRLDL+EQ +VE AS+H
Sbjct  362  NEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASAH  421

Query  421  LTITLQGLPTIAGqaaaqppalnpnapqlIva-------papdapavpaSVYRLSAVHLP  473
            LTI ++G+P++A    +  ++L    P                +++   +  RLS V  P
Sbjct  422  LTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPPP  481

Query  474  EYARP--TLSEVQRERLQLLEIFEASHNLSVADYAKLVGKSRRWITYEIQAGNLLSIHLG  531
                P   +S +QRER ++L I+E++ +L+V+ ++KL GKS+  I  E++AG+LLSI LG
Sbjct  482  PTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLG  541

Query  532  HRGQRVPDWQLDPIKRKLIQAVLKLVPRGIDTWHIYHALLRPYDALGKCPVIEAVDPTNL  591
            +RGQRVPDWQL P+K+KL Q +++   ++ D+W++Y+ L +P   LG  + I+AV PTN+
Sbjct  542  NRGQRVPDWQLVPLKHKLAQVLMNQCLHA-DSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  592  HLAARLVAAHTIETDELAEQSEASPVLA--RQTVERLVKTAMLVD  634
                R++ ++  +  +++E   + P+    RQ+V RLV +A+++D
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLD  645

40) Daci_4139 in NC_010002


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  468 bits (1763),  Expect = 4e-133, Method: Compositional matrix adjust.
 Identities = 328/645 (51%), Positives = 471/645 (74%), Gaps = 14/645 (2%)

Query  2    LSDLQVRQAKVTGKAYSLVDFDGLYFYISATGFKAWHFRFTWGGKRERMSFGGYPALSLK  61
            LSDL VRQAK TGK Y+L D D L + +SA+G K+W+FR+ W GK+ R+ +GGYPALSL+
Sbjct  3    LSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALSLR  62

Query  62   DARNLRDEARAMLAKGINPHSERKRKRHAIVLAGEHTFQAIYDKWLAHRSLSLENEGRQS  121
            +AR  RD A+A+LA+GI+P+ ER +KRHA  LAGE TF++++D W+ HR   L +EGRQS
Sbjct  63   EARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKEL-KEGRQS  121

Query  122  TPKQIGRVFAKDVFPVLRHLTIYDVTRAHLLDIIGRVEKRGSLSVAEKLRTWFSQLFTYA  181
            T  QI R+F KDV+P L  ++IYD+ R++LL++++ +EKR +++ AEK+RTWF+Q+F YA
Sbjct  122  TLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYA  181

Query  182  SVVVPNMGDNPAKDLDVVAMPLPPVENNPFLRMPELPAMLQTLRKYSgrl-ntqlglrll  240
             V+   +  NPA DLDVVA P PPV +NP+L++PE+P  LQ LR Y+ R  +TQLG+RLL
Sbjct  182  LVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRLL  241

Query  241  lltgvrtgelrYATPDQFDLERGLWIIPVVrlkqrkqltkkkrqrFADIPPYIVPLSLQA  300
            +LTGVRTGELR A P+QFDL+RGLWIIP   +KQ ++  +K  +R  D+PPYIVPLSLQA
Sbjct  242  FLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQA  301

Query  301  QEVVRHLLGNLKPAQVYLIPGDWCLKNPLSENTLNGALKRMGYEDQLTGHGVRATISTAL  360
             E+VR LLG ++PAQ YL++    LK+ +SENTLN A++ MGYE++LTGHG+R+TISTAL
Sbjct  302  IEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTAL  361

Query  361  NELGYPPKWVDAQLSHADPDRISATYNHAEYVEQRRVMMQDWADRLDLFEQNQVEVASTH  420
            NE+GYP  WVDAQLSH+DP+++S++YNHA YVE RR MMQDWADRLDL+EQ +VE AS+H
Sbjct  362  NEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASAH  421

Query  421  LTITLQGLPTIAGqaaaqppalnpnapqlIva-------papdapavpaSVYRLSAVHLP  473
            LTI ++G+P++A    +  ++L    P                +++   +  RLS V  P
Sbjct  422  LTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPPP  481

Query  474  EYARP--TLSEVQRERLQLLEIFEASHNLSVADYAKLVGKSRRWITYEIQAGNLLSIHLG  531
                P   +S +QRER ++L I+E++ +L+V+ ++KL GKS+  I  E++AG+LLSI LG
Sbjct  482  PTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLG  541

Query  532  HRGQRVPDWQLDPIKRKLIQAVLKLVPRGIDTWHIYHALLRPYDALGKCPVIEAVDPTNL  591
            +RGQRVPDWQL P+K+KL Q +++   ++ D+W++Y+ L +P   LG  + I+AV PTN+
Sbjct  542  NRGQRVPDWQLVPLKHKLAQVLMNQCLHA-DSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  592  HLAARLVAAHTIETDELAEQSEASPVLA--RQTVERLVKTAMLVD  634
                R++ ++  +  +++E   + P+    RQ+V RLV +A+++D
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLD  645

41) NCGM2_1452 in NC_017549


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  463 bits (1743),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 328/647 (51%), Positives = 472/647 (73%), Gaps = 14/647 (2%)

Query  2    LSDLQVRQAKVTGKAYSLVDFDGLYFHISATGFKAWHFRFTWGGKRERMSFGGYPALSLK  61
            LSDL VRQAK TGK Y+L D D L + +SA+G K+W+FR+ W GK+ R+ +GGYPALSL+
Sbjct  3    LSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALSLR  62

Query  62   DARNLRDEARAMLAKGINPHSERKRKRHAIVLAGEHTFQAIYDKWLAHRSLSLENEGRQS  121
            +AR  RD A+A+LA+GI+P+ ER +KRHA  LAGE TF++++D W+ HR   L +EGRQS
Sbjct  63   EARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKEL-KEGRQS  121

Query  122  TPKQIGRVFAKDVFPVLRHLTIYDVTRAHLLDIIGRVEKRGSLSVAEKLRTWFSQLFTYA  181
            T  QI R+F KDV+P L  ++IYD+ R++LL++++ +EKR +++ AEK+RTWF+Q+F YA
Sbjct  122  TLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYA  181

Query  182  SVVVPNMGDNPAKDLDVVAMPLPPVENNPFLRMPELPAMLQTLRKYSgrl-ntqlglrll  240
             V+   +  NPA DLDVVA P PPV +NP+L++PE+P  LQ LR Y+ R  +TQLG+RLL
Sbjct  182  LVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRLL  241

Query  241  lltgvrtgelrYATPDQFDLERGLWIIPVVrlkqrkqltkkkrqrFADIPPYIVPLSLQA  300
            +LTGVRTGELR A P+QFDL+RGLWIIP   +KQ ++  +K  +R  D+PPYIVPLSLQA
Sbjct  242  FLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQA  301

Query  301  QEVVRHLLGNLKPAQVYLIPGDWCLKNPLSENTLNGALKRMGYEDQLTGHGVRATISTAL  360
             E+VR LLG ++PAQ YL++    LK+ +SENTLN A++ MGYE++LTGHG+R+TISTAL
Sbjct  302  IEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTAL  361

Query  361  NELGYPPKWVDAQLSHADPDRISATYNHAEYVEQRRVMMQDWADRLDLFEQNQVEVASTH  420
            NE+GYP  WVDAQLSH+DP+++S++YNHA YVE RR MMQDWADRLDL+EQ +VE AS+H
Sbjct  362  NEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASAH  421

Query  421  LTITLQGLPTIAGqaaaqppalnpnapqlIva-------papdapavpaSVYRLSAVHLP  473
            LTI ++G+P++A    +  ++L    P                +++   +  RLS V  P
Sbjct  422  LTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPPP  481

Query  474  EYARP--TLSEVQRERLQLLEMFEAPHNLSVADYAKLVGKSRRWITYEIQAGNLLSIHLG  531
                P   +S +QRER ++L ++E+P +L+V+ ++KL GKS+  I  E++AG+LLSI LG
Sbjct  482  PTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLG  541

Query  532  HRGQRVPDWQLDPIKRKLIQAVLKLVPRGIDTWHIYHALLRPYDALGKCPVIEAVDPTNl  591
            +RGQRVPDWQL P+K+KL Q +++   ++ D+W++Y+ L +P   LG  + I+AV PTN+
Sbjct  542  NRGQRVPDWQLVPLKHKLAQVLMNQCLHA-DSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  592  hlaarlvaahaIETDELAEQSEASPVLA--RQTVERLVKTAMLVDTP  636
                R++ ++  +  +++E   + P+    RQ+V RLV +A+++D +
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLDGA  647

42) PSTAA_1290 in NC_017532


> JN559393|4|G2|382929427|AFG30104.1|Pseudomonas_aeruginosa_U6|+|1369..3312|-|-|Int
Length=647

 Score =  461 bits (1738),  Expect = 5e-131, Method: Compositional matrix adjust.
 Identities = 328/645 (51%), Positives = 471/645 (74%), Gaps = 14/645 (2%)

Query  2    LSDLQVRQAKVTGKAYSLVDFDGLYFYISATGFKAWHFRFTWGGKRERMSFGGYPALSLK  61
            LSDL VRQAK TGK Y+L D D L + +SA+G K+W+FR+ W GK+ R+ +GGYPALSL+
Sbjct  3    LSDLTVRQAKTTGKRYTLSDNDCLGLMVSAAGGKSWQFRYYWLGKQKRLCLGGYPALSLR  62

Query  62   DARNLRDEARAMLAKGINPHSERKRKRHAIVLAGEHTFQAIYDKWLAHRSLSLENEGRQS  121
            +AR  RD A+A+LA+GI+P+ ER +KRHA  LAGE TF++++D W+ HR   L +EGRQS
Sbjct  63   EARTERDKAQALLARGIDPQVERDQKRHAAKLAGEYTFKTVFDAWVEHRRKEL-KEGRQS  121

Query  122  TPKQIGRVFAKDVFPVLRHLTIYDVTRAHLLDIIGRVEKRGSLSVAEKLRTWFSQLFTYA  181
            T  QI R+F KDV+P L  ++IYD+ R++LL++++ +EKR +++ AEK+RTWF+Q+F YA
Sbjct  122  TLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYA  181

Query  182  SVVVPNMGDNPAKDLDVVAMPLPPVENNPFLRMPELPAMLQTLRKYSgrl-ntqlglrll  240
             V+   +  NPA DLDVVA P PPV +NP+L++PE+P  LQ LR Y+ R  +TQLG+RLL
Sbjct  182  LVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPEMPEFLQKLRLYNPRGWQTQLGVRLL  241

Query  241  lltgvrtgelrYATPDQFDLERGLWIIPVVrlkqrkqltkkkrqrFADIPPYIVPLSLQA  300
            +LTGVRTGELR A P+QFDL+RGLWIIP   +KQ ++  +K  +R  D+PPYIVPLSLQA
Sbjct  242  FLTGVRTGELRLAEPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQA  301

Query  301  QEVVRHLLGNLKPAQVYLIPGDWCLKNPLSENTLNGALKRMGYEDQLTGHGVRATISTAL  360
             E+VR LLG ++PAQ YL++    LK+ +SENTLN A++ MGYE++LTGHG+R+TISTAL
Sbjct  302  IEIVRYLLGVMRPAQRYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTAL  361

Query  361  NELGYPPKWVDAQLSHADPDRISATYNHAEYVEQRRVMMQDWADRLDLFEQNQVEVASTH  420
            NE+GYP  WVDAQLSH+DP+++S++YNHA YVE RR MMQDWADRLDL+EQ +VE AS+H
Sbjct  362  NEIGYPKIWVDAQLSHSDPNKVSSSYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASAH  421

Query  421  LTITLQGLPTIAGqaaaqppalnpnapqlIva-------papdapavpaSVYRLSAVHLP  473
            LTI ++G+P++A    +  ++L    P                +++   +  RLS V  P
Sbjct  422  LTIRIDGVPAMAEVEETMDATLTMAEPTPPGVPPVVATPIVVTPSSGGITFQRLSQVPPP  481

Query  474  EYARP--TLSEVQRERLQLLEIFEASHNLSVADYAKLVGKSRRWITYEIQAGNLLSIHLG  531
                P   +S +QRER ++L I+E++ +L+V+ ++KL GKS+  I  E++AG+LLSI LG
Sbjct  482  PTHAPEPEVSAIQREREEMLTIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLG  541

Query  532  HRGQRVPDWQLDPIKRKLIQAVLKLVPRGIDTWHIYHALLRPYDALGKCPVIEAVDPTNl  591
            +RGQRVPDWQL P+K+KL Q +++   ++ D+W++Y+ L +P   LG  + I+AV PTN+
Sbjct  542  NRGQRVPDWQLVPLKHKLAQVLMNQCLHA-DSWDLYRMLTQPHPDLGDRAAIDAVTPTNV  600

Query  592  hlaarlvaahaIETDELAEQSEASPVLA--RQTVERLVKTAMLVD  634
                R++ ++  +  +++E   + P+    RQ+V RLV +A+++D
Sbjct  601  PAIIRVIMGDYQHHADMPEAIAPYPIPEDVRQSVRRLVDSAVVLD  645