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Homologs of orf408 gene of NC_003197_P2

141

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE451236_12775
( YP_008265581.1 )

regulatory protein

NC_021820
(Salmonella enterica 08-1736)

7e-165

100

2) orf408
( YP_005237250.1 )

putative regulatory protein

NC_016856
(Salmonella enterica 14028S)

7e-165

100

3) UMN798_1440
( YP_005396782.1 )

ribokinase/regulatory protein

NC_017046
(Salmonella enterica 798)

7e-165

100

4) CFSAN001921_10235
( YP_008255420.1 )

regulatory protein

NC_021814
(Salmonella enterica CFSAN001921)

7e-165

100

5) STMMW_13871
( YP_005232441.1 )

putative ribokinase/regulatory protein

NC_016854
(Salmonella enterica D23580)

7e-165

100

6) orf408
( NP_460347.1 )

regulatory protein

NC_003197
(Salmonella enterica LT2)

7e-165

100

7) SL1344_1316
( YP_005181226.1 )

putative ribokinase/regulatory protein

NC_016810
(Salmonella enterica SL1344)

7e-165

100

8) STM474_1387
( YP_005242282.1 )

putative regulatory protein

NC_016857
(Salmonella enterica ST4/74)

7e-165

100

9) STMDT12_C13980
( YP_005247094.1 )

putative regulatory protein

NC_016860
(Salmonella enterica T000240)

7e-165

100

10) STU288_03230
( YP_007901751.1 )

ribokinase/regulatory protein

NC_021151
(Salmonella enterica U288)

7e-165

100

11) STMUK_1348
( YP_005251886.1 )

putative regulatory protein

NC_016863
(Salmonella enterica UK-1)

7e-165

100

12) SPAB_01946
( YP_001588169.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-164

13) SNSL254_A1495
( YP_002040636.1 )

regulatory protein

NC_011080
(Salmonella enterica SL254)

2e-164

14) SN31241_24540
( YP_008360370.1 )

Regulatory protein, DeoR

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-164

15) orf408
( YP_002226701.1 )

ribokinase/regulatory protein

NC_011274
(Salmonella enterica 287/91)

3e-164

16) SeD_A1960
( YP_002215746.1 )

regulatory protein

NC_011205
(Salmonella enterica CT_02021853)

3e-164

17) orf408
( YP_002243763.1 )

ribokinase/regulatory protein

NC_011294
(Salmonella enterica P125109)

3e-164

18) SBOV13801
( YP_008505248.1 )

putative regulatory protein

NC_022241
(Salmonella enterica 3114)

5e-164

19) SEEH1578_16145
( YP_008247288.1 )

Ribokinase

NC_021810
(Salmonella enterica 41578)

5e-164

20) SU5_01999
( YP_006087633.1 )

Ribokinase

NC_017623
(Salmonella enterica B182)

5e-164

21) SEEB0189_12625
( YP_008308840.1 )

regulatory protein

NC_021844
(Salmonella enterica CFSAN000189)

5e-164

22) CFSAN002069_02090
( YP_008249278.1 )

regulatory protein

NC_021812
(Salmonella enterica CFSAN002069)

5e-164

23) SeHA_C1516
( YP_002045387.1 )

regulatory protein

NC_011083
(Salmonella enterica SL476)

5e-164

24) I137_05520
( YP_008380615.1 )

regulatory protein

NC_021984
(Salmonella enterica S06004)

7e-164

25) SPC_2347
( YP_002637905.1 )

regulatory protein, deoR family

NC_012125
(Salmonella enterica RKS4594)

9e-164

26) rbsk
( YP_216390.1 )

DeoR family transcriptional regulator

NC_006905
(Salmonella enterica SC-B67)

9e-164

27) SeAg_B1789
( YP_002146658.1 )

regulatory protein, DeoR family

NC_011149
(Salmonella enterica SL483)

9e-164

28) SPUCDC_1199
( YP_008480872.1 )

putative ribokinase/regulatory protein

NC_022221
(Salmonella enterica CDC1983-67)

2e-163

29) CFSAN002050_13305
( YP_008260572.1 )

regulatory protein

NC_021818
(Salmonella enterica CFSAN002050)

2e-163

30) SPUL_1199
( YP_005212410.1 )

putative ribokinase/regulatory protein

NC_016831
(Salmonella enterica RKS5078)

2e-163

31) CFSAN001992_04685
( YP_007470695.1 )

putative ribokinase

NC_020307
(Salmonella enterica CFSAN001992)

4e-163

32) SeSA_A1479
( YP_002114397.1 )

regulatory protein DeoR family protein

NC_011094
(Salmonella enterica CVM19633)

7e-163

33) SBG_1221
( YP_004730091.1 )

ribokinase

NC_015761
(Salmonella bongori NCTC 12419)

1e-157

34) SPUL_4032
( YP_005215093.1 )

putative kinase/transcriptional regulatory protein

NC_016831
(Salmonella enterica RKS5078)

1e-71

35) SSPA3172
( YP_002144014.1 )

ribokinase

NC_011147
(Salmonella enterica AKU12601)

2e-71

36) SPA3399
( YP_152522.1 )

ribokinase

NC_006511
(Salmonella enterica ATCC 9150)

2e-71

37) SE451236_03175
( YP_008263706.1 )

regulatory protein

NC_021820
(Salmonella enterica 08-1736)

2e-71

38) STM14_4272
( YP_005239756.1 )

putative transcriptional regulator

NC_016856
(Salmonella enterica 14028S)

2e-71

39) SG3890
( YP_002228635.1 )

kinase/transcriptional regulator

NC_011274
(Salmonella enterica 287/91)

2e-71

40) SBOV36151
( YP_008507424.1 )

ribokinase

NC_022241
(Salmonella enterica 3114)

2e-71

41) SEEH1578_03815
( YP_008244836.1 )

putative ribokinase

NC_021810
(Salmonella enterica 41578)

2e-71

42) UMN798_3851
( YP_005398873.1 )

kinase/transcriptional regulatory protein

NC_017046
(Salmonella enterica 798)

2e-71

43) SU5_04022
( YP_006089620.1 )

Ribokinase

NC_017623
(Salmonella enterica B182)

2e-71

44) SEEB0189_02135
( YP_008306795.1 )

regulatory protein

NC_021844
(Salmonella enterica CFSAN000189)

2e-71

45) CFSAN001921_22710
( YP_008257837.1 )

regulatory protein

NC_021814
(Salmonella enterica CFSAN001921)

2e-71

46) CFSAN002069_14445
( YP_008251667.1 )

regulatory protein

NC_021812
(Salmonella enterica CFSAN002069)

2e-71

47) STY4264
( NP_458372.1 )

putative ribokinase

NC_003198
(Salmonella enterica CT18)

2e-71

48) STMMW_35361
( YP_005234553.1 )

putative kinase/transcriptional regulatory protein

NC_016854
(Salmonella enterica D23580)

2e-71

49) STBHUCCB_42030
( YP_005219637.1 )

Ribokinase

NC_016832
(Salmonella enterica P-stx-12)

2e-71

50) SEN3370
( YP_002245436.1 )

kinase/transcriptional regulatory protein

NC_011294
(Salmonella enterica P125109)

2e-71

51) SPC_3615
( YP_002639138.1 )

ribokinase

NC_012125
(Salmonella enterica RKS4594)

2e-71

52) rbsK
( YP_218464.1 )

sugar metabolism transcriptional regulator

NC_006905
(Salmonella enterica SC-B67)

2e-71

53) SPAB_04408
( YP_001590556.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-71

54) SNSL254_A3816
( YP_002042792.1 )

ribokinase

NC_011080
(Salmonella enterica SL254)

2e-71

55) SeHA_C3859
( YP_002047572.1 )

ribokinase

NC_011083
(Salmonella enterica SL476)

2e-71

56) SeAg_B3749
( YP_002148470.1 )

ribokinase

NC_011149
(Salmonella enterica SL483)

2e-71

57) rbsK
( YP_005244535.1 )

putative transcriptional regulator of sugar metabolism

NC_016857
(Salmonella enterica ST4/74)

2e-71

58) STMDT12_C36020
( YP_005249298.1 )

ribokinase

NC_016860
(Salmonella enterica T000240)

2e-71

59) t3974
( NP_807584.1 )

ribokinase

NC_004631
(Salmonella enterica Ty2)

2e-71

60) TY21A_20210
( YP_007928215.1 )

putative ribokinase

NC_021176
(Salmonella enterica Ty21a)

2e-71

61) STU288_17925
( YP_007904672.1 )

putative ribokinase

NC_021151
(Salmonella enterica U288)

2e-71

62) STMUK_3532
( YP_005254015.1 )

putative transcriptional regulator

NC_016863
(Salmonella enterica UK-1)

2e-71

63) SN31241_3450
( YP_008358264.1 )

Ribokinase

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-71

64) PMI1528
( YP_002151259.1 )

carbohydrate kinase

NC_010554
(Proteus mirabilis HI4320)

3e-71

65) SeD_A3918
( YP_002217505.1 )

ribokinase

NC_011205
(Salmonella enterica CT_02021853)

3e-71

66) I137_19280
( YP_008383169.1 )

regulatory protein

NC_021984
(Salmonella enterica S06004)

3e-71

67) BB2000_1570
( YP_008398116.1 )

carbohydrate kinase/trancriptional regulator

NC_022000
(Proteus mirabilis BB2000)

4e-71

68) CFSAN002050_24690
( YP_008262791.1 )

regulatory protein

NC_021818
(Salmonella enterica CFSAN002050)

4e-71

69) CFSAN001992_15895
( YP_007472899.1 )

ribokinase

NC_020307
(Salmonella enterica CFSAN001992)

1e-70

70) SeSA_A3738
( YP_002116481.1 )

ribokinase

NC_011094
(Salmonella enterica CVM19633)

1e-70

71) A464_3617
( YP_008324211.1 )

Putative ribo kinase

NC_021870
(Salmonella bongori N268-08)

5e-70

72) SBG_3139
( YP_004731951.1 )

ribokinase

NC_015761
(Salmonella bongori NCTC 12419)

5e-70

73) ECABU_c22990
( YP_006106349.1 )

DNA-binding protein/kinase

NC_017631
(Escherichia coli ABU 83972)

2e-68

74) APECO1_1076
( YP_853096.1 )

carbohydrate kinase

NC_008563
(Escherichia coli APEC O1)

2e-68

75) c2492
( NP_754381.1 )

carbohydrate kinase

NC_004431
(Escherichia coli CFT073)

2e-68

76) i14_2300
( YP_006154406.1 )

putative carbohydrate kinase

NC_017652
(Escherichia coli clone D i14)

2e-68

77) i02_2300
( YP_006149487.1 )

putative carbohydrate kinase

NC_017651
(Escherichia coli clone D i2)

2e-68

78) ECIAI39_1040
( YP_002407058.1 )

putative carbohydrate kinase

NC_011750
(Escherichia coli IAI39)

2e-68

79) ECS88_2067
( YP_002391770.1 )

carbohydrate kinase

NC_011742
(Escherichia coli S88)

2e-68

80) ECSF_1860
( YP_003349850.1 )

putative ribokinase

NC_013654
(Escherichia coli SE15)

2e-68

81) EcSMS35_1084
( YP_001743162.1 )

PfkB family DNA-binding protein/kinase

NC_010498
(Escherichia coli SMS-3-5)

2e-68

82) ECP_2004
( YP_669904.1 )

carbohydrate kinase

NC_008253
(Escherichia coli 536)

5e-68

83) O3M_09550
( YP_006769563.1 )

carbohydrate kinase

NC_018650
(Escherichia coli 2009EL-2050)

8e-68

84) O3O_16035
( YP_006783689.1 )

carbohydrate kinase

NC_018661
(Escherichia coli 2009EL-2071)

8e-68

85) O3K_09585
( YP_006778616.1 )

carbohydrate kinase

NC_018658
(Escherichia coli 2011C-3493)

8e-68

86) EC55989_2232
( YP_002403272.1 )

carbohydrate kinase

NC_011748
(Escherichia coli 55989)

8e-68

87) UMNK88_2519
( YP_006134255.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

8e-68

88) PAGR_g3628
( YP_005994340.1 )

ribokinase RbsK

NC_017554
(Pantoea ananatis PA13)

4e-67

89) rbsK
( YP_005936565.1 )

ribokinase RbsK

NC_017531
(Pantoea ananatis AJ13355)

5e-67

90) S70_04250
( YP_006215422.1 )

carbohydrate kinase

NC_017731
(Providencia stuartii MRSN 2154)

5e-67

91) rbsK
( YP_003518838.1 )

RbsK

NC_013956
(Pantoea ananatis LMG 20103)

7e-67

92) rbsK9
( YP_005197181.1 )

ribokinase

NC_016816
(Pantoea ananatis LMG 5342)

4e-66

93) Dd586_3831
( YP_003335367.1 )

ribokinase

NC_013592
(Dickeya dadantii Ech586)

5e-66

94) Q7S_18010
( YP_005403382.1 )

ribokinase

NC_017047
(Rahnella aquatilis HX2)

1e-65

95) Rahaq_3574
( YP_004214293.1 )

ribokinase

NC_015061
(Rahnella sp. Y9602)

1e-65

96) A464_1738
( YP_008322333.1 )

Ribo kinase

NC_021870
(Salmonella bongori N268-08)

4e-64

97) SBG_1519
( YP_004730379.1 )

sugar Kinase

NC_015761
(Salmonella bongori NCTC 12419)

4e-64

98) Pat9b_0005
( YP_004113891.1 )

PfkB domain-containing protein

NC_014837
(Pantoea sp. At-9b)

1e-63

99) Dda3937_00343
( YP_003884940.1 )

ribokinase

NC_014500
(Dickeya dadantii 3937)

2e-63

100) rbsK1
( YP_008140586.1 )

ribokinase RbsK

NC_021591
(Serratia odorifera 4Rx13)

3e-63

101) M621_24175
( YP_008161581.1 )

RbsK

NC_021659
(Serratia plymuthica S13)

3e-63

102) SerAS9_4731
( YP_004508086.1 )

ribokinase

NC_015567
(Serratia plymuthica AS9)

9e-63

103) SerAS12_4732
( YP_004503134.1 )

ribokinase

NC_015566
(Serratia sp. AS12)

9e-63

104) SerAS13_4732
( YP_006027548.1 )

Ribokinase

NC_017573
(Serratia sp. AS13)

9e-63

105) STM3547.Sc
( NP_462448.2 )

transcriptional regulator

NC_003197
(Salmonella enterica LT2)

9e-62

106) SL1344_3513
( YP_005183396.1 )

putative kinase/transcriptional regulatory protein

NC_016810
(Salmonella enterica SL1344)

9e-62

107) W5S_4283
( YP_006285211.1 )

Ribokinase

NC_017845
(Pectobacterium sp. SCC3193)

1e-59

108) Pecwa_4124
( YP_003261459.1 )

ribokinase

NC_013421
(Pectobacterium wasabiae WPP163)

1e-59

109) ECO103_2457
( YP_003222371.1 )

carbohydrate kinase

NC_013353
(Escherichia coli 12009)

4e-58

110) CE10_2296
( YP_006144357.1 )

putative carbohydrate kinase

NC_017646
(Escherichia coli CE10)

4e-58

111) rbsK
( YP_006168053.1 )

DNA-binding protein/kinase, PfkB family

NC_017663
(Escherichia coli P12b)

4e-58

112) Ser39006_0664
( YP_008521046.1 )

Ribokinase

NC_022268
(Serratia sp. ATCC 39006)

5e-58

113) EAE_07450
( YP_004591693.1 )

ribokinase

NC_015663
(Enterobacter aerogenes KCTC 2190)

2e-56

114) ST548_p4542
( YP_007390056.1 )

Ribokinase

NC_020181
(Enterobacter aerogenes EA1509E)

6e-56

115) Ser39006_0840
( YP_008521222.1 )

Ribokinase

NC_022268
(Serratia sp. ATCC 39006)

4e-54

116) EFER_0074
( YP_002381304.1 )

sugar metabolism transcriptional regulator

NC_011740
(Escherichia fergusonii ATCC 35469)

5e-54

117) W5S_3859
( YP_006284794.1 )

Ribokinase

NC_017845
(Pectobacterium sp. SCC3193)

1e-53

118) Pecwa_3718
( YP_003261060.1 )

ribokinase

NC_013421
(Pectobacterium wasabiae WPP163)

2e-53

119) E2348C_0066
( YP_002327658.1 )

ribokinase

NC_011601
(Escherichia coli E2348/69)

5e-52

120) ECNA114_0054
( YP_006137150.1 )

Putative ribokinase

NC_017644
(Escherichia coli NA114)

1e-51

121) ECSF_0071
( YP_003348061.1 )

putative ribokinase

NC_013654
(Escherichia coli SE15)

1e-51

122) Q7S_17560
( YP_005403292.1 )

PfkB domain-containing protein

NC_017047
(Rahnella aquatilis HX2)

2e-51

123) Rahaq_3488
( YP_004214207.1 )

PfkB domain-containing protein

NC_015061
(Rahnella sp. Y9602)

2e-51

124) ENC_28190
( YP_007846364.1 )

Sugar kinases, ribokinase family

NC_021046
(Enterobacter cloacae NCTC 9394)

3e-51

125) Rahaq2_3565
( YP_005201502.1 )

ribokinase

NC_016818
(Rahnella aquatilis CIP 78.65)

6e-51

126) ECIAI39_4374
( YP_002410248.1 )

putative carbohydrate kinase

NC_011750
(Escherichia coli IAI39)

7e-51

127) CE10_4664
( YP_006146625.1 )

putative carbohydrate kinase

NC_017646
(Escherichia coli CE10)

9e-51

128) swp_3807
( YP_002313073.1 )

Carbohydrate kinase, PfkB

NC_011566
(Shewanella piezotolerans WP3)

3e-49

129) rbsK
( YP_003521087.1 )

RbsK

NC_013956
(Pantoea ananatis LMG 20103)

4e-49

130) PAGR_g1231
( YP_005991977.1 )

ribokinase RbsK

NC_017554
(Pantoea ananatis PA13)

4e-49

131) rbsK3
( YP_005194682.1 )

ribokinase

NC_016816
(Pantoea ananatis LMG 5342)

5e-49

132) rbsK
( YP_005934956.1 )

ribokinase RbsK

NC_017531
(Pantoea ananatis AJ13355)

2e-48

133) Pat9b_4200
( YP_004119320.1 )

PfkB domain-containing protein

NC_014841
(Pantoea sp. At-9b)

9e-48

134) KPHS_26410
( YP_005226941.1 )

ribokinase

NC_016845
(Klebsiella pneumoniae HS11286)

4e-41

135) N559_2605
( YP_008425561.1 )

putative ribokinase

NC_022082
(Klebsiella pneumoniae JM45)

4e-41

136) KOX_01985
( YP_005016379.1 )

ribokinase

NC_016612
(Klebsiella oxytoca KCTC 1686)

1e-36

137) A225_4868
( YP_006500541.1 )

ribokinase

NC_018106
(Klebsiella oxytoca E718)

1e-36

138) A79E_2522
( YP_006636317.1 )

ribokinase

NC_018522
(Klebsiella pneumoniae 1084)

9e-35

139) KP1_2751
( YP_002919478.1 )

ribokinase

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

9e-35

140) KPR_2603
( YP_007991582.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

2e-30

141) UMN179_01523
( YP_004420437.1 )

ribokinase

NC_015460
(Gallibacterium anatis UMN179)

4e-30

• Sequence Alignments

1) SE451236_12775 in NC_021820


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

2) orf408 in NC_016856


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

3) UMN798_1440 in NC_017046


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

4) STMMW_13871 in NC_016854


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

5) orf408 in NC_003197


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

6) SL1344_1316 in NC_016810


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

7) STM474_1387 in NC_016857


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

8) STMDT12_C13980 in NC_016860


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

9) STU288_03230 in NC_021151


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

10) STMUK_1348 in NC_016863


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

11) CFSAN001921_10235 in NC_021814


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

12) SNSL254_A1495 in NC_011080


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  572 bits (2159),  Expect = 2e-164, Method: Compositional matrix adjust.
 Identities = 407/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

13) SN31241_24540 in NC_021902


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  572 bits (2159),  Expect = 2e-164, Method: Compositional matrix adjust.
 Identities = 407/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

14) SPAB_01946 in NC_010102


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  572 bits (2159),  Expect = 2e-164, Method: Compositional matrix adjust.
 Identities = 407/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

15) SeD_A1960 in NC_011205


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  571 bits (2156),  Expect = 3e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

16) orf408 in NC_011294


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  571 bits (2156),  Expect = 3e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

17) orf408 in NC_011274


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  571 bits (2156),  Expect = 3e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

18) SEEB0189_12625 in NC_021844


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  570 bits (2153),  Expect = 5e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVININ  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

19) SBOV13801 in NC_022241


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  570 bits (2153),  Expect = 5e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVININ  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

20) SEEH1578_16145 in NC_021810


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  570 bits (2153),  Expect = 5e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVININ  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

21) SU5_01999 in NC_017623


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  570 bits (2153),  Expect = 5e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVININ  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

22) CFSAN002069_02090 in NC_021812


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  570 bits (2153),  Expect = 5e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVININ  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

23) SeHA_C1516 in NC_011083


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  570 bits (2153),  Expect = 5e-164, Method: Compositional matrix adjust.
 Identities = 406/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVININ  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

24) I137_05520 in NC_021984


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  570 bits (2151),  Expect = 7e-164, Method: Compositional matrix adjust.
 Identities = 405/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYKKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPY KQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

25) SeAg_B1789 in NC_011149


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  569 bits (2150),  Expect = 9e-164, Method: Compositional matrix adjust.
 Identities = 405/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENTKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRREN KKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

26) rbsk in NC_006905


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  569 bits (2150),  Expect = 9e-164, Method: Compositional matrix adjust.
 Identities = 405/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENTKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRREN KKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

27) SPC_2347 in NC_012125


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  569 bits (2150),  Expect = 9e-164, Method: Compositional matrix adjust.
 Identities = 405/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENTKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRREN KKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

28) CFSAN002050_13305 in NC_021818


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  568 bits (2145),  Expect = 2e-163, Method: Compositional matrix adjust.
 Identities = 405/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENTKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRREN KKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVININ  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

29) SPUCDC_1199 in NC_022221


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  568 bits (2145),  Expect = 2e-163, Method: Compositional matrix adjust.
 Identities = 404/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLDSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVL+SFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYKKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPY KQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

30) SPUL_1199 in NC_016831


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  568 bits (2145),  Expect = 2e-163, Method: Compositional matrix adjust.
 Identities = 404/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLDSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVL+SFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGIASYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI+SYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYKKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPY KQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

31) CFSAN001992_04685 in NC_020307


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  567 bits (2141),  Expect = 4e-163, Method: Compositional matrix adjust.
 Identities = 403/408 (99%), Positives = 407/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDIPSTIATPIHQDAKLRRENTKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDI+STIATPIHQDAKLRREN KKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQENKMIMLNPAPYTKQMTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQENKMIMLNPAPYTKQ+THLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVININ  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

32) SeSA_A1479 in NC_011094


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  566 bits (2138),  Expect = 7e-163, Method: Compositional matrix adjust.
 Identities = 403/408 (99%), Positives = 406/408 (99%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPIHQDAKLRRENTKKTGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATPIHQDAKLRREN KK+GKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaaHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  RTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240
            +TDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALTEFIRLGKQGNKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            ALTEFIRLGKQ NKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLLCEHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+CEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadmvaaIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408
            QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

33) SBG_1221 in NC_015761


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  549 bits (2071),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 385/408 (95%), Positives = 399/408 (98%), Gaps = 0/408 (0%)

Query  1    MFKEERRHAIINLLIKNNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60
            MFKEERRHAIINLLIK+NSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   DALSKLITENKIDISSTIATPTHQDAKLRRESSKKAGKVCVLGSFNIDVSATVPWFPQSG  120
            DALSKLITENKIDISSTIATP HQDAKLRRE++KKAGKVCVLGSFNIDVSATVPWFPQSG
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSG  120

Query  121  ESILASQFGFYPggkganqalaannagaaVHFIFKVGTDQFSAFAINHIIQSGITSYSAY  180
            ESILASQFGFYPGGKGANQALAANNAGAA HFIFKVG DQFSAFA+NHIIQSGITSYSAY
Sbjct  121  ESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  181  QTDKAPTGSALIYVSSADGDNIIAIYPGANMMLTPQEINEQHRYITECDVMLMQLETNIE  240
            QTDKAPTGSALIYVS+ DGDNIIAIYPGANMMLT QEINEQHRYI+E DVMLMQLETNIE
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  241  ALIEFIRLGKEKNKTIILNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300
            AL EFIRLGK+ NK I+LNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  301  AGNIILQSGVKKVIITLGARGSLFCDHARTLYIPAWSavvkdaagagdafngalaaalar  360
            AGNIILQSGVKKVIITLGARGSL+C+HARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  361  qadliaaIQYASAFASLAVEHVGASSMPQHLQVLHRMRTQSNKVININ  408
            QAD++AAIQYASAFASLAVE+VGASSMPQHLQVLHRMRTQSNKVI+IN
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKVIHIN  408

34) SPUL_4032 in NC_016831


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  263 bits (984),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 188/400 (47%), Positives = 281/400 (71%), Gaps = 4/400 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITTQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQGSHYKL  399
             +A+ YASAFASLAVE   AS MP++  VLHR++    K+
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNKV  404

35) SSPA3172 in NC_011147


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  263 bits (983),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 280/394 (72%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIINNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++++ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

36) SPA3399 in NC_006511


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  263 bits (983),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 280/394 (72%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIINNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++++ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

37) SE451236_03175 in NC_021820


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

38) SeAg_B3749 in NC_011149


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

39) SEEB0189_02135 in NC_021844


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

40) SBOV36151 in NC_022241


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

41) rbsK in NC_006905


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

42) SEN3370 in NC_011294


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

43) SG3890 in NC_011274


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

44) SEEH1578_03815 in NC_021810


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

45) SU5_04022 in NC_017623


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

46) CFSAN002069_14445 in NC_021812


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

47) SeHA_C3859 in NC_011083


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

48) SNSL254_A3816 in NC_011080


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

49) SN31241_3450 in NC_021902


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

50) SPAB_04408 in NC_010102


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

51) SPC_3615 in NC_012125


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

52) STY4264 in NC_003198


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 186/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALSSGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGAL+++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

53) STM14_4272 in NC_016856


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

54) UMN798_3851 in NC_017046


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

55) STMMW_35361 in NC_016854


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

56) rbsK in NC_016857


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

57) STMDT12_C36020 in NC_016860


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

58) STU288_17925 in NC_021151


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

59) STMUK_3532 in NC_016863


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

60) CFSAN001921_22710 in NC_021814


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

61) STBHUCCB_42030 in NC_016832


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 186/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALSSGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGAL+++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

62) TY21A_20210 in NC_021176


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 186/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALSSGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGAL+++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

63) t3974 in NC_004631


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 186/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALSSGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGAL+++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

64) PMI1528 in NC_010554


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (978),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 193/396 (49%), Positives = 290/396 (74%), Gaps = 4/396 (1%)

Query  2    KAERHKKIVNLIKGHGAVKVSVLAKELSVTKETIRSDLNTLAEKGIIKRCHGGAFIEFET  61
            K ER+  I+NL+  + +V VS L+    V++ETIRSDL  +   G+++RC GG++++ ++
Sbjct  3    KEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDA  62

Query  62   LDKVAKKEIIQFLECN----DQIDKINLAGQPAVNKVCVLGSFNVDMISYLPRLPETGES  117
            L K+   + I++        +Q  K+         KVCVLGSFN+D+ + +P++P++GES
Sbjct  63   LSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGES  122

Query  118  LLANKFIFSPGGKGCNQALAASYADAQVHFITKIGTDQFSDYAVNFISSSRIKTSTIYQT  177
            +LA++F F PGGKG NQALAA+ A+A  HFI K+G DQFS +A+N I  S I + + YQT
Sbjct  123  ILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQT  182

Query  178  ENHQTGTASIFVSEESGENIISIYSGANMDISSDEVkiqkdkiidadiillqlETNIEAL  237
            ++  TG+A I+VS   G+NII+IY+GANM ++++E++ Q   I ++D++L+QLETNIEAL
Sbjct  183  DKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEAL  242

Query  238  KEIISIGNENNIPIILNPAPYNKVIDKLLPMLDILTPNETEASLLSGIEVVDLVSAKNAA  297
             E+I +G+++N  I+LNPAPY K +  LL+ +DI+TPNETEAS+LSG+ + D+  AK+A+
Sbjct  243  TEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAG  302

Query  298  NAIYQKGVNKVVITLGSKGSLAYDGYKYIYSPAYPAVVKNTAGAGDAFNGALAASLAKGK  357
            N I Q GV+KV+ITLG++GSL  +  + +Y PA +AVVK++AGAGDAFNGALAA+LA+  
Sbjct  303  NIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQA  362

Query  358  QFSYALRYASAFASLAVETSNASEMPEDINVMHRIN  393
            +   A++YASAFASLAVE   AS MP++++V+HR+ 
Sbjct  363  DMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

65) SeD_A3918 in NC_011205


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (978),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 186/394 (48%), Positives = 278/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCEAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK  ++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

66) I137_19280 in NC_021984


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  262 bits (980),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

67) BB2000_1570 in NC_022000


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  261 bits (977),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 193/396 (49%), Positives = 290/396 (74%), Gaps = 4/396 (1%)

Query  2    KAERHKKIVNLIKGHGAVKVSVLAKELSVTKETIRSDLNTLAEKGIIKRCHGGAFIEFET  61
            K ER+  I+NL+  + +V VS L+    V++ETIRSDL  +   G+++RC GG++++ ++
Sbjct  3    KEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDA  62

Query  62   LDKVAKKEIIQFLECN----DQIDKINLAGQPAVNKVCVLGSFNVDMISYLPRLPETGES  117
            L K+   + I++        +Q  K+         KVCVLGSFN+D+ + +P++P++GES
Sbjct  63   LSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGES  122

Query  118  LLANKFIFSPGGKGCNQALAASYADAQVHFITKIGTDQFSDYAVNFISSSRIKTSTIYQT  177
            +LA++F F PGGKG NQALAA+ A+A  HFI K+G DQFS +A+N I  S I + + YQT
Sbjct  123  ILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQT  182

Query  178  ENHQTGTASIFVSEESGENIISIYSGANMDISSDEVkiqkdkiidadiillqlETNIEAL  237
            ++  TG+A I+VS   G+NII+IY+GANM ++++E++ Q   I ++D++L+QLETNIEAL
Sbjct  183  DKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEAL  242

Query  238  KEIISIGNENNIPIILNPAPYNKIIDKLLPMLDILTPNETEASLLSGIEVVDLVSAKNAA  297
             E+I +G+++N  I+LNPAPY K +  LL+ +DI+TPNETEAS+LSG+ + D+  AK+A+
Sbjct  243  TEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAG  302

Query  298  NAIYQKGVNKVVITLGSKGSLAYDGYKYIYSPAYPAVVKNTAGAGDAFNGALAASLAKGK  357
            N I Q GV+KV+ITLG++GSL  +  + +Y PA +AVVK++AGAGDAFNGALAA+LA+  
Sbjct  303  NIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQA  362

Query  358  QFSYALRYASAFASLAVETSNASEMPEDINVMHRIN  393
            +   A++YASAFASLAVE   AS MP++++V+HR+ 
Sbjct  363  DMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

68) CFSAN002050_24690 in NC_021818


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  261 bits (977),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 279/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPLTGESLL  119
            ++    K +I+  +    +   K+++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

69) CFSAN001992_15895 in NC_020307


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  260 bits (972),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 278/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKNKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K ++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIIHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

70) SeSA_A3738 in NC_011094


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  260 bits (972),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 187/394 (48%), Positives = 278/394 (71%), Gaps = 4/394 (1%)

Query  4    ERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLD  63
            ER+H I++ L     V VS+L+   KV++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYVLEK-YESAQKNKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLL  119
            ++    K +I+  +    +   K ++  +    +VCV+GSFN+D+ + +P++P +GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYAINFINSSKIHKSVIYQTKE  179
            A +F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N I  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIIHSDIVLVQLETNYEALQQ  239
            + TG+A I V++  GDN+IAIYPGANM ++ +EI  Q   I +SD++L+QLETN EAL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  TIRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKI  299
             IRL+++++  +++NPAPY   V  ++ +ID ITPNETEA++L+ +++ DI+ AK A++I
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I Q GVK+ IITLG++GSL  + ++ +Y PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ASALCYASAFASLAVETPNASDMPENDSVLHRIQ  393
             +A+ YASAFASLAVE   AS MP++  VLHR++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

71) SBG_3139 in NC_015761


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  258 bits (963),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 182/398 (46%), Positives = 280/398 (71%), Gaps = 6/398 (1%)

Query  4    ERHHKILKQISTSGIVKVAVLAKSLNVTKETIRSDLNELASLGYLTRCHGGAFITLDSLD  63
            ER+H I++ +     V V+ L+   +V++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYALEN--YEETRGIKKGRSDMKSHVCVIGSFNVDIISYLPRLPAIGESL  118
            ++    K +I+ ++     ++++ +++  +   + VCV+GSFN+D+ + +P++P  GES+
Sbjct  65   KLITENKIDISSTIATPIHQDAK-LRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESI  123

Query  119  LANKFIFSPGGKGCNQALAASYADSDVHFITKVGADHFSEYAINFMNASKIHKSIIYQTP  178
            LA++F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N +  S I     YQT 
Sbjct  124  LASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTD  183

Query  179  ETQTGTATILVNEDTGDNVIAIYPGANMTITPDEVMIQQEAIINSNIVLLQLETNYSALR  238
             + TG+A I V+   GDN+IAIYPGANM +T +E+  Q+  I +S+++L+QLETN  AL 
Sbjct  184  KAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALT  243

Query  239  QAISLAQKNGVPVIINPAPYNDGVDSLIKDIDYITPNETEAGLLAGIEVTDITSARQAAK  298
            + I L++++   +++NPAPY   V  L+ DID ITPNETEA++L+G+ +TDI  A++A++
Sbjct  244  EFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGN  303

Query  299  IIHQKGVKNTIITLGSKGSLAYDGKKFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKP  358
            II Q GVK+ IITLG++GSL  +  + +Y PA +AVVK++AGAGDAFNGALA++LA+   
Sbjct  304  IILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQAD  363

Query  359  LESALCYASAFASLAVETANASDMPEHESVIHRIQSTP  396
            + +A+ YASAFASLAVE   AS MP+H  V+HR+++ +
Sbjct  364  MVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQS  401

72) A464_3617 in NC_021870


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  258 bits (963),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 182/398 (46%), Positives = 280/398 (71%), Gaps = 6/398 (1%)

Query  4    ERHHKILKQISTSGIVKVAVLAKSLNVTKETIRSDLNELASLGYLTRCHGGAFITLDSLD  63
            ER+H I++ +     V V+ L+   +V++ETIRSDL  +   G L RC GG+++  D+L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  64   NV---AKNEIAYALEN--YEETRGIKKGRSDMKSHVCVIGSFNVDIISYLPRLPAIGESL  118
            ++    K +I+ ++     ++++ +++  +   + VCV+GSFN+D+ + +P++P  GES+
Sbjct  65   KLITENKIDISSTIATPIHQDAK-LRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESI  123

Query  119  LANKFIFSPGGKGCNQALAASYADSDVHFITKVGADHFSEYAINFMNASKIHKSIIYQTP  178
            LA++F F PGGKG NQALAA+ A++  HFI KVG D+FS +A+N +  S I     YQT 
Sbjct  124  LASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTD  183

Query  179  ETQTGTATILVNEDTGDNVIAIYPGANMTITPDEVMIQQEAIINSNIVLLQLETNYSALR  238
             + TG+A I V+   GDN+IAIYPGANM +T +E+  Q+  I +S+++L+QLETN  AL 
Sbjct  184  KAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALT  243

Query  239  QAISLAQKNGVPVIINPAPYNDGVDSLIKDIDYITPNETEAGLLAGIEVTDITSARQAAK  298
            + I L++++   +++NPAPY   V  L+ DID ITPNETEA++L+G+ +TDI  A++A++
Sbjct  244  EFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGN  303

Query  299  IIHQKGVKNTIITLGSKGSLAYDGKKFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKP  358
            II Q GVK+ IITLG++GSL  +  + +Y PA +AVVK++AGAGDAFNGALA++LA+   
Sbjct  304  IILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQAD  363

Query  359  LESALCYASAFASLAVETANASDMPEHESVIHRIQSTP  396
            + +A+ YASAFASLAVE   AS MP+H  V+HR+++ +
Sbjct  364  MVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQS  401

73) ECABU_c22990 in NC_017631


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

74) APECO1_1076 in NC_008563


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

75) c2492 in NC_004431


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

76) i14_2300 in NC_017652


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

77) i02_2300 in NC_017651


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

78) ECIAI39_1040 in NC_011750


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

79) ECS88_2067 in NC_011742


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

80) ECSF_1860 in NC_013654


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

81) EcSMS35_1084 in NC_010498


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 185/395 (47%), Positives = 279/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

82) ECP_2004 in NC_008253


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  251 bits (939),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 184/395 (47%), Positives = 278/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + TG+A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYIPPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D I PNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNGALA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

83) EC55989_2232 in NC_011748


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  251 bits (936),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 183/395 (47%), Positives = 278/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTETATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + T +A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGSLASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNG+LA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

84) O3M_09550 in NC_018650


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  251 bits (936),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 183/395 (47%), Positives = 278/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTETATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + T +A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGSLASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNG+LA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

85) O3O_16035 in NC_018661


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  251 bits (936),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 183/395 (47%), Positives = 278/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTETATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + T +A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGSLASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNG+LA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

86) O3K_09585 in NC_018658


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  251 bits (936),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 183/395 (47%), Positives = 278/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTETATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + T +A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGSLASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNG+LA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

87) UMNK88_2519 in NC_017641


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  251 bits (936),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 183/395 (47%), Positives = 278/395 (71%), Gaps = 4/395 (1%)

Query  4    ERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFI---VLD  60
            ER+H I++ L K  SV VS LS+  +V++ETIRSDL  + + G L RC GG+++    L 
Sbjct  5    ERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALS  64

Query  61   SLDTIAKNEIAYALEN-YDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLL  119
             L T  K +I+ ++    +    +++ ++   ++VCV+GSFN+D+ + +P++P  GES+L
Sbjct  65   KLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESIL  124

Query  120  ASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKE  179
            AS+F F PGGKG NQALAA+ A++   FI KVG D+FS +A+N +  S I     YQT  
Sbjct  125  ASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAYQTDK  184

Query  180  TQTETATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQ  239
            + T +A I V+   GDN+IAIYPGANM ++++EI  Q   I +SDV+L+QLETN  AL +
Sbjct  185  APTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIEALTE  244

Query  240  AITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEA  299
             I L+++++  +++NPAPY   V +L+ D+D ITPNETEA++LSG+ + D++ AK+A++ 
Sbjct  245  FIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNI  304

Query  300  IHNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGSLASGLAKGKSL  359
            I + GVK+ +ITLG++GSL  +  + +  PA +AVVK++AGAGDAFNG+LA++LA+   +
Sbjct  305  ILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADM  364

Query  360  ESALCYASAFASLAVETSNASDMPEHESVIHRIQS  394
             +A+ YASAFASLAVE   AS MP+H  V+HR+++
Sbjct  365  VAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

88) PAGR_g3628 in NC_017554


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  248 bits (926),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 200/406 (50%), Positives = 292/406 (72%), Gaps = 20/406 (4%)

Query  2    MFLEERRNQILQWLDEHERVTVNGLASQLRVTRETIRTDLRALAEQGLVQRCYGGAIVQR  61
            MF EERR+ I++ L  ++ V+V+ L+   +V++ETIR+DLR +   G++QRCYGG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  62   RNLQEKLISESG-----------HFDVLLKRLQARKTTVKTTSRQGKVCILGAFNVDIVA  110
              L  KLI+E+            H D  L+R +++K+        GKVC+LG+FN+D+ A
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA--------GKVCVLGSFNIDVSA  111

Query  111  RVARFPQSGESLMAQGSTLGPGGKGANQAMAASRAGARVHFVAKVGTDRFSQFAFDHLSS  170
             V++FPQSGES++A    + PGGKGANQA+AA+ AGA  HF+ KVG D+FS FA +H+  
Sbjct  112  TVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQ  171

Query  171  SDIHSFRLYQTDTEPTGSAIIYVSQENGENMIAIYPGANKTLTDAEIAELTHELTDADVL  230
            S+I S+  YQTD  PTGSA+IYVS  +G+N+IAIYPGAN  LT  EI E  + ++++DV+
Sbjct  172  SGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVM  231

Query  231  LLQLENNVEATRSAIRLAHALGVRIIMNPAPFSSEVVNVLPMIDVLTPNETEASRLSGIE  290
            L+QLE N+EA    IRL+      I++NPAP++ +V ++L+ ID++TPNETEAS LSG+ 
Sbjct  232  LMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVT  291

Query  291  ICDMASARKAAQAIVAQGAQRVIITMGARGALLFDAPHCHVIPAFPALSVDTTgagdafn  350
            I D+  A+KA++ I+  G ++VIIT+GARG+L+ + ++   IPA +A+  D++GAGDAFN
Sbjct  292  ITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFN  351

Query  351  galaaalaqgqpllqaatwasafaslaVEREGASNMPKRHQVITRL  396
            GALAAALA+   ++ A   ASAFASLAVE+ GAS+MP++ QV+ R+
Sbjct  352  GALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

89) rbsK in NC_017531


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  248 bits (925),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 200/406 (50%), Positives = 292/406 (72%), Gaps = 20/406 (4%)

Query  2    MFLEERRNQILQWLDEHERVTVNGLASQLRVTRETIRTDLRALAEQGLVQRCYGGAIVQR  61
            MF EERR+ I++ L  ++ V+V+ L+   +V++ETIR+DLR +   G++QRCYGG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  62   RNLQEKLISESG-----------HFDVLLKRLQARKTTVKTTSRQGKVCILGAFNVDIVA  110
              L  KLI+E+            H D  L+R +++K+        GKVC+LG+FN+D+ A
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA--------GKVCVLGSFNIDVSA  111

Query  111  RVARFPQSGESLMAQGSTLGPGGKGANQAMAASRAGARVHFVAKVGTDRFSQFAFDHLSS  170
             V++FPQSGES++A    + PGGKGANQA+AA+ AGA  HF+ KVG D+FS FA +H+  
Sbjct  112  TVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQ  171

Query  171  SDIHSFRLYQTDTEPTGSAIIYVSQENGENMIAIYPGANKTLTDAEIAELTHELTDADVL  230
            S+I S+  YQTD  PTGSA+IYVS  +G+N+IAIYPGAN  LT  EI E  + ++++DV+
Sbjct  172  SGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVM  231

Query  231  LLQLENNVEATRSAIRLAHALGVRIIMNPAPFSSEVVNVLPMIDVLTPNETEASRLSGIE  290
            L+QLE N+EA    IRL+      I++NPAP++ +V ++L+ ID++TPNETEAS LSG+ 
Sbjct  232  LMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVT  291

Query  291  ICDMASARKAAQAIVAQGAQRVIITMGARGALLFDAPHCHVIPAFPALSVDTTgagdafn  350
            I D+  A+KA++ I+  G ++VIIT+GARG+L+ + ++   IPA +A+  D++GAGDAFN
Sbjct  292  ITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFN  351

Query  351  galaaalaqgqpllqaatwasafaslaVEREGASNMPKRHQVITRL  396
            GALAAALA+   ++ A   ASAFASLAVE+ GAS+MP++ QV+ R+
Sbjct  352  GALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

90) S70_04250 in NC_017731


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 161/303 (54%), Positives = 238/303 (79%), Gaps = 0/303 (0%)

Query  2    NGKVCVLGSFNVDMISYLPRLPEAGESLLSNKFIFSPGGKGCNQALAASYSDSQVHFITK  61
             GKVCVLGSFN+D+ + +P++P++GES+L+++F F PGGKG NQALAA+ +++  HFI K
Sbjct  96   AGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFK  155

Query  62   IGTDQFSDYAVNFISSSKIKTSAIYQTEKFQTGTASIFVSENSGENIISIYPGSNMDISA  121
            +G DQFS +A+N I  S I + + YQT+K  TG+A I+VS   G+NII+IYPG+NM +++
Sbjct  156  VGKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTT  215

Query  122  DEVKIQKDKIINSNIILLQLETNIEALREIISIGNEYNIPIILNPAPYSDIAIELLEKVD  181
            +E++ Q   I +S+++L+QLETNIEAL E+I +G++ N  I+LNPAPY+    +LL  +D
Sbjct  216  QEINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDID  275

Query  182  ILTPNETEASLLSGVNVVDMESAKKAADVIYHKGVKKVVITLGSKGSIAYDGNKFIYSPA  241
            I+TPNETEAS+LSGV + D++ AKKA+++I + GVKKV+ITLG++GS+  +  + +Y PA
Sbjct  276  IITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPA  335

Query  242  YTAVVKNTAGAGDAFNGALAASLAKGKQFSYALRYASAFSSLAVETSKASEMPEDINVIY  301
             +AVVK++AGAGDAFNGALAA+LA+  +   A++YASAF+SLAVE   AS MP++++V+ 
Sbjct  336  WSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLH  395

Query  302  RIN  304
            R+ 
Sbjct  396  RMR  398

91) rbsK in NC_013956


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  247 bits (924),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 200/406 (50%), Positives = 292/406 (72%), Gaps = 20/406 (4%)

Query  1    MFLEERRNQILQWLDEHERVTVNGLASQLRVTRETIRTDLRALAEQGLVQRCYGGAIVQR  60
            MF EERR+ I++ L  ++ V+V+ L+   +V++ETIR+DLR +   G++QRCYGG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RNLQEKLISESG-----------HFDVLLKRLQARKTTVKTTSRQGKVCILGAFNVDIVA  109
              L  KLI+E+            H D  L+R +++K+        GKVC+LG+FN+D+ A
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA--------GKVCVLGSFNIDVSA  111

Query  110  RVARFPQSGESLMAQGSTLGPGGKGANQAMAASRAGARVHFVAKVGTDRFSQFAFDHLSS  169
             V++FPQSGES++A    + PGGKGANQA+AA+ AGA  HF+ KVG D+FS FA +H+  
Sbjct  112  TVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQ  171

Query  170  SDIHSFRLYQTDTEPTGSAIIYVSQENGENMIAIYPGANKTLTDGEIAELTHELTDADVL  229
            S+I S+  YQTD  PTGSA+IYVS  +G+N+IAIYPGAN  LT  EI E  + ++++DV+
Sbjct  172  SGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVM  231

Query  230  LLQLENNVEATRSAIRLAHALGVRIIMNPAPFSSEVVNVLPMIDVLTPNETEASRLSGIE  289
            L+QLE N+EA    IRL+      I++NPAP++ +V ++L+ ID++TPNETEAS LSG+ 
Sbjct  232  LMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVT  291

Query  290  ICDMASARKAAQAIVAQGAQRVIITMGARGALLFDAPHCHVIPAFPALSVDTTgagdafn  349
            I D+  A+KA++ I+  G ++VIIT+GARG+L+ + ++   IPA +A+  D++GAGDAFN
Sbjct  292  ITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFN  351

Query  350  galaaalaqgqpllqaatwasafaslaVEREGASNMPKRHQVITRL  395
            GALAAALA+   ++ A   ASAFASLAVE+ GAS+MP++ QV+ R+
Sbjct  352  GALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

92) rbsK9 in NC_016816


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  245 bits (914),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 199/406 (50%), Positives = 292/406 (72%), Gaps = 20/406 (4%)

Query  2    MFLEERRNQILQWLDEHERVTVNGLASQLRVTRETIRTDLRALAEQGLVQRCYGGAIVQR  61
            MF EERR+ I++ L  ++ V+V+ L+   +V++ETIR+DLR +   G++QRCYGG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  62   RNLQEKLISESG-----------HFDVLLKRLQARKTTVKTTSRQGKVCIFGAFNVDIVA  110
              L  KLI+E+            H D  L+R +++K+        GKVC++G+FN+D+ A
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA--------GKVCVLGSFNIDVSA  111

Query  111  RVARFPQSGESLMAQGCTLGPGGKGANQAMAASRAGARVHFVAKVGTDRFSQFAFDHLSS  170
             V++FPQSGES++A    + PGGKGANQA+AA+ AGA  HF+ KVG D+FS FA +H+  
Sbjct  112  TVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQ  171

Query  171  SDIHSFRLYQTDTEPTGSAIIYVSQENGENMIAIYPGANKTLTDAEIAELTHELTDADVL  230
            S+I S+  YQTD  PTGSA+IYVS  +G+N+IAIYPGAN  LT  EI E  + ++++DV+
Sbjct  172  SGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVM  231

Query  231  LLQLENNVEATRSAIRLAHALGVRIIMNPAPFSSEVVNVLPMIDVLTPNETEASRLSGIE  290
            L+QLE N+EA    IRL+      I++NPAP++ +V ++L+ ID++TPNETEAS LSG+ 
Sbjct  232  LMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVT  291

Query  291  ICDMASARKAAQAIVAQGAQRVIITMGARGALLFDAPHCHVIPAFPALSVDTTgagdafn  350
            I D+  A+KA++ I+  G ++VIIT+GARG+L+ + ++   IPA +A+  D++GAGDAFN
Sbjct  292  ITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFN  351

Query  351  galaaalaqgqpllqaatwasafaslaVEREGASNMPKRHQVITRL  396
            GALAAALA+   ++ A   ASAFASLAVE+ GAS+MP++ QV+ R+
Sbjct  352  GALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

93) Dd586_3831 in NC_013592


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  245 bits (913),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 191/400 (48%), Positives = 288/400 (72%), Gaps = 3/400 (0%)

Query  1    MFLEERRNKILDYLDQHDRVSVEYLAEVFSVTRETIRSDLNALARQRLVQRCHGGAIIIR  60
            MF EERR+ I++ L +++ VSV  L++++ V++ETIRSDL  + +  ++QRC GG+I+ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQSQLITETGKDFEVLLKKIKNQVRNRSIRKKDKTMKGKVCILGSFNVDIVARVARFP  120
             +L S+LITE   D+   +    +Q  +  +R+ +    GKVC+LGSFN+D+ A V++FP
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQ--DAKLRRENPKKAGKVCVLGSFNIDVSATVPWFP  117

Query  121  KGGESLLAQGSALGPGGKganqamaasmagaKVHFVSKVGKDQFSHFAYEHLSKSPIHSF  180
            ++GES+LA   ++ PGGKGANQA+AA+ AGA  HF+ KVGKDQFS FA +H+ +S I S+
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  KLYQSETEPTGNAIIYVSQQNGENMIAIYSGANKTLTDEEIAEIMPDLEDADVLLLQMEN  240
              YQ++  PTG+A+IYVS  +G+N+IAIY+GAN  LT +EI E    + ++DV+L+Q+E 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NFPATLSAMKLARALDTRIILNPAPYSDDVVSCLDYVDIITPNETEASLLSGIEISNLES  300
            N+ A    ++L++  +  I+LNPAPY+ +V   L  +DIITPNETEAS+LSG+ I++++ 
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  ARQAAQKIHALGAARVIITMGANGALLFDGQQFQHIPAFPAVSVdttgagdafngafaaa  360
            A++A++ I   G  +VIIT+GA G+L+ +  +   IPA +AV  D++GAGDAFNGA+AAA
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  vaagqsvaqaaTYANAFASLAVEREGAANMPTHQQVTNRL  400
            +A    +  A  YA+AFASLAVE+ GA++MP H QV +R+
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

94) Q7S_18010 in NC_017047


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  244 bits (909),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 184/401 (46%), Positives = 276/401 (69%), Gaps = 4/401 (0%)

Query  1    MFLEERRQQILEYLDKNERVKVEVLASLFAVTRETIRSDLNALAAEKLVQRCHGGAMVIR  60
            MF EERR+ I++ L K++ V V  L+ L+ V++ETIRSDL  +    ++QRC GG+++ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQSKLIADTGGNFEvllqrlqsqkrkqsvqqgkgkNMKGKVCILGSFNVDIVAKVERF  120
             +L SKLI++   ++   +     Q  K   ++    +  GKVC+LGSFN+D+ A V +F
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENP---KKAGKVCVLGSFNIDVSATVPWF  116

Query  121  PKGGESLLALGSTLGPGGKGANQATAVSRAGARVHFVSKVGKDQFSQFAYDHLTSSEIHS  180
            P++GES+LA    + PGGKGANQA A + AGA  HF+ KVGKDQFS FA +H+  S I S
Sbjct  117  PQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITS  176

Query  181  FTLYQSDTEPTGNAIIYVSQENGENMIAIYSGANKTISEDEVAAIAPELEDSDVLLVQLE  240
            ++ YQ+D  PTG+A+IYVS  +G+N+IAIY+GAN  ++ +E+      + +SDV+L+QLE
Sbjct  177  YSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLE  236

Query  241  NNFAATLSAMKLAKALGVKVILNPAPFSSHALECLEYVDVITPNETEASQLSGIDVKDLA  300
             N+ A    ++L+K     ++LNPAP++ +  + L  +D+ITPNETEAS LSG+ + D+ 
Sbjct  237  TNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIN  296

Query  301  SAKEAAQRIVSQGARRVIITMGSRGALLFDGNQFQHIPAFPALSVDTTGAGDAFNGALAS  360
             AK A++ I+  G ++VIIT+G+RG+L+ +  +   IPA +A+  D++GAGDAFNGALA+
Sbjct  297  DAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAA  356

Query  361  SIANGQSLVQaatyaaafaslaVEREGASNMPDKAQVSARL  401
            ++A    +V A  YA+AFASLAVE+ GAS+MP+  QV  R+
Sbjct  357  ALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

95) Rahaq_3574 in NC_015061


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  244 bits (909),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 184/401 (46%), Positives = 276/401 (69%), Gaps = 4/401 (0%)

Query  1    MFLEERRQQILEYLDKNERVKVEVLASLFAVTRETIRSDLNALAAEKLVQRCHGGAMVIR  60
            MF EERR+ I++ L K++ V V  L+ L+ V++ETIRSDL  +    ++QRC GG+++ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQSKLIADTGGNFEvllqrlqsqkrkqsvqqgkgkNMKGKVCILGSFNVDIVAKVERF  120
             +L SKLI++   ++   +     Q  K   ++    +  GKVC+LGSFN+D+ A V +F
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENP---KKAGKVCVLGSFNIDVSATVPWF  116

Query  121  PKGGESLLALGSTLGPGGKGANQATAVSRAGARVHFVSKVGKDQFSQFAYDHLTSSEIHS  180
            P++GES+LA    + PGGKGANQA A + AGA  HF+ KVGKDQFS FA +H+  S I S
Sbjct  117  PQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITS  176

Query  181  FTLYQSDTEPTGNAIIYVSQENGENMIAIYSGANKTISEDEVAAIAPELEDSDVLLVQLE  240
            ++ YQ+D  PTG+A+IYVS  +G+N+IAIY+GAN  ++ +E+      + +SDV+L+QLE
Sbjct  177  YSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLE  236

Query  241  NNFAATLSAMKLAKALGVKVILNPAPFSSHALECLEYVDVITPNETEASQLSGIDVKDLA  300
             N+ A    ++L+K     ++LNPAP++ +  + L  +D+ITPNETEAS LSG+ + D+ 
Sbjct  237  TNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIN  296

Query  301  SAKEAAQRIVSQGARRVIITMGSRGALLFDGNQFQHIPAFPALSVDTTGAGDAFNGALAS  360
             AK A++ I+  G ++VIIT+G+RG+L+ +  +   IPA +A+  D++GAGDAFNGALA+
Sbjct  297  DAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAA  356

Query  361  SIANGQSLVQaatyaaafaslaVEREGASNMPDKAQVSARL  401
            ++A    +V A  YA+AFASLAVE+ GAS+MP+  QV  R+
Sbjct  357  ALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

96) SBG_1519 in NC_015761


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  238 bits (889),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 179/402 (45%), Positives = 278/402 (70%), Gaps = 8/402 (1%)

Query  1    MLNKERHYAILTWLNRYERATVNHLARLFGVTKETIRSDLNTLSREGCIERCHGGAIIKR  60
            M++ ER+ AI+  L + +  +V+ L+ L+ V++ETIRSDL  + + G ++RC GG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RIFH---TQSVNNLDSNIMHFFDSPPSKKIVKSRHKGRKMKGKVCILGSFNVDIIANVDR  117
              +    T++  ++ S I     + P  +  K R+   K  GKVC+LGSFN+D+ A V +
Sbjct  61   DALSKLITENKIDISSTI-----ATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPW  115

Query  118  FPQSGESIFSENTVIGPGGKGANQALAVSKCHVKTHFVGKVGNDQFSQLAYEHLSSSDID  177
            FPQSGESI++ +  + PGGKGANQALA ++    +HF+ KVG+DQFS +A +H+  S+I 
Sbjct  116  FPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGIT  175

Query  178  SFMLYQDKKAKTGTALIYVCQSDGENMIAISPGANQSITADEVEAITAEVKNSDVFLTQL  237
            S+  YQ  KA TG+ALIYV   DG+N+IAI PGAN  +T++E++     + +SDV L QL
Sbjct  176  SYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQL  235

Query  238  ENNLPATFRAIEIARRCGTKVVLDPAPYSPEVVNCLQNVDFLTPNETEASLLSGIHVTDL  297
            E N+ A    I ++++    ++L+PAPY+ +V + L ++D++TPNETEAS+LSG+ +TD+
Sbjct  236  ETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDI  295

Query  298  asaktaakaikakGVGQVIITMGAKGALIYDGLEFIHVPALKALCVDTTGAGDAFNGAYT  357
              AK A++ I   GV +VIIT+GA+G+LI +    + +PA  A+  D++GAGDAFNGA +
Sbjct  296  NDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALA  355

Query  358  AAMAKGQSILQAVKFACAFASLAVEKEGASNMPEYKDVLTRL  399
            AA+A+   ++ A+++A AFASLAVE+ GAS+MP+  +VL R+
Sbjct  356  AALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

97) A464_1738 in NC_021870


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  238 bits (889),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 179/402 (45%), Positives = 278/402 (70%), Gaps = 8/402 (1%)

Query  1    MLNKERHYAILTWLNRYERATVNHLARLFGVTKETIRSDLNTLSREGCIERCHGGAIIKR  60
            M++ ER+ AI+  L + +  +V+ L+ L+ V++ETIRSDL  + + G ++RC GG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RIFH---TQSVNNLDSNIMHFFDSPPSKKIVKSRHKGRKMKGKVCILGSFNVDIIANVDR  117
              +    T++  ++ S I     + P  +  K R+   K  GKVC+LGSFN+D+ A V +
Sbjct  61   DALSKLITENKIDISSTI-----ATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPW  115

Query  118  FPQSGESIFSENTVIGPGGKGANQALAVSKCHVKTHFVGKVGNDQFSQLAYEHLSSSDID  177
            FPQSGESI++ +  + PGGKGANQALA ++    +HF+ KVG+DQFS +A +H+  S+I 
Sbjct  116  FPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGIT  175

Query  178  SFMLYQDKKAKTGTALIYVCQSDGENMIAISPGANQSITADEVEAITAEVKNSDVFLTQL  237
            S+  YQ  KA TG+ALIYV   DG+N+IAI PGAN  +T++E++     + +SDV L QL
Sbjct  176  SYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQL  235

Query  238  ENNLPATFRAIEIARRCGTKVVLDPAPYSPEVVNCLQNVDFLTPNETEASLLSGIHVTDL  297
            E N+ A    I ++++    ++L+PAPY+ +V + L ++D++TPNETEAS+LSG+ +TD+
Sbjct  236  ETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDI  295

Query  298  asaktaakaikakGVGQVIITMGAKGALIYDGLEFIHVPALKALCVDTTGAGDAFNGAYT  357
              AK A++ I   GV +VIIT+GA+G+LI +    + +PA  A+  D++GAGDAFNGA +
Sbjct  296  NDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALA  355

Query  358  AAMAKGQSILQAVKFACAFASLAVEKEGASNMPEYKDVLTRL  399
            AA+A+   ++ A+++A AFASLAVE+ GAS+MP+  +VL R+
Sbjct  356  AALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

98) Pat9b_0005 in NC_014837


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 189/399 (48%), Positives = 288/399 (73%), Gaps = 3/399 (0%)

Query  1    MFLEERRNQILKWLDEQERVTVNGLASQLGVTRETIRTDLSALARQGLVQRCYGGAIALR  60
            MF EERR+ I++ L  ++ V+V+ L+    V++ETIR+DL  + + G++QRCYGG+I L 
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGI-LN  59

Query  61   RNLQEKLISESGGNFEVLLER--LQARRTTANTAAKSGKVCILGAFNVDIVAKVARFPRG  118
            R+   KLI+E+  ++   +     Q  +   + + K+GKVC+LG+FN+D+ A V++FP++
Sbjct  60   RDALSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQS  119

Query  119  GESLLALGSTLGPGGKGANQAMAASCAGTRVHFVAKVGTDQFSKFAFDHLSASGIHSFRL  178
            GES+LA    + PGGKGANQA+AA+ AG+  HF+ KVG DQFS FA +H+  SGI S+  
Sbjct  120  GESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSA  179

Query  179  YQTDSEPTGSAIIYVSQENGENMIAIYSGANKTFTDDEIAEMTHELSDASVLLLQLENNF  238
            YQTD  PTGSA+IYVS  +G+N+IAIY+GAN  +T +EI E  + ++++ V+L+QLE N+
Sbjct  180  YQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNI  239

Query  239  EATRSAIRLAHTLGVRVIMNPAPFSAEVLSCLAMIDVLTPNETEASLLSGIEIIDLASAR  298
            EA    IRL+      +++NPAP++ +V   L+ ID++TPNETEAS+LSG+ I D+  A+
Sbjct  240  EALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAK  299

Query  299  AAAQAIVGLGARRVIITMGSRGALLLDNQQFHHIPAFPALSVDTTgagdafngalaaala  358
             A++ I+  G ++VIIT+G+RG+L+ ++ +   IPA +A+  D++GAGDAFNGALAAALA
Sbjct  300  KAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALA  359

Query  359  qgqsllqaatwasafaalaVEREGASNMPDRQQVIARLH  397
            +   ++ A   ASAFA+LAVE+ GAS+MP++ QV+ R++
Sbjct  360  RQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMR  398

99) Dda3937_00343 in NC_014500


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  236 bits (881),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 189/400 (48%), Positives = 285/400 (72%), Gaps = 3/400 (0%)

Query  1    MFLEERRNKILEYLDQYDRASVEYLAAIFSVTRETIRSDLNALARQRLVQRCHGGAVIIR  60
            MF EERR+ I++ L + +  SV  L+ ++ V++ETIRSDL  + +  ++QRC GG+++ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQSQLITETGKDFEVLLKKIKNQVRNKSVRKKDKTMKGKVCILGSFNVDIVARVARFP  120
             +L S+LITE   D+   +    +Q  +  +R+ +    GKVC+LGSFN+D+ A V++FP
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQ--DAKLRRENPKKAGKVCVLGSFNIDVSATVPWFP  117

Query  121  KGGESLLAQGSALGPGGKganqamaasmagaKVHFVSKVGKDQFSHFAYEHLSKSAIHSF  180
            ++GES+LA   ++ PGGKGANQA+AA+ AGA  HF+ KVGKDQFS FA +H+ +S+I S+
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  KLYQSDTEPTGNAIIYVSLQNGENMIAIYSGANKTLTDEEIAEIMPELEDADVLLLQMEN  240
              YQ+D  PTG+A+IYVS  +G+N+IAIY+GAN  LT +EI E    + ++DV+L+Q+E 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NFPATLSAMKLARALDTQIILNPAPYSDDVLSCLDYVDIITPNETEASLLSGIEINNLDS  300
            N+ A    ++L++  +  I+LNPAPY+ +V   L  +DIITPNETEAS+LSG+ I +++ 
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  ARQAAQKIHALGAARVIITMGANGALLFDGQQFQHIPAFPAVSVdttgagdafngafaaa  360
            A++A++ I   G  +VIIT+GA G+L+ +  +   IPA +AV  D++GAGDAFNGA+AAA
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  vaggqsvaqaaTYANAFASLAVEREGAANMPTQQQVTNRL  400
            +A    +  A  YA+AFASLAVE+ GA++MP + QV +R+
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

100) rbsK1 in NC_021591


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  235 bits (877),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 196/400 (49%), Positives = 287/400 (72%), Gaps = 3/400 (0%)

Query  1    MFLEERRNNILDYLDKYERVSVAYLATSFAVTKETIRSDLNVLAQLGLVQRCHGGAIVIR  60
            MF EERR+ I++ L K + VSV+ L+  + V++ETIRSDL  + + G++QRC GG+I+ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQAKLITETDGTFEVLLRRLESQKRKVQEPERGKNMRGKVCILGSFNVDIVARVARFP  120
             +L +KLITE    +   +     Q  K++  +  K   GKVC+LGSFN+D+ A V++FP
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA--GKVCVLGSFNIDVSATVPWFP  117

Query  121  KGGESLLALGSTLGPGGKGANQAMAASRAGAQVHFVSKVGKDQFSQFAFDHLSASEIHSF  180
            ++GES+LA    + PGGKGANQA+AA+ AGA  HF+ KVGKDQFS FA +H+  S I S+
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  TLYQSETEPTGNAIIYVSQQDGENMIAIYSGANKTITDEEVAAIAPELAGAEVLLVQLEN  240
            + YQ++  PTG+A+IYVS  DG+N+IAIY+GAN  +T +E+      +A ++V+L+QLE 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NFNATLNAMKLANALGIRVILNPAPYSADALQCLEYVDVITPNETEASLLSGVEVTDLNS  300
            N++A  + ++L++     ++LNPAPY+ +  + L  +D+ITPNETEAS+LSGV +TD+N 
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  AKEAAQRIAALGARRVIITMGARGAMILEGSQFQHIPAFPALSVdttgagdafngafaaa  360
            AK A++ I   G ++VIIT+GARG++I E ++   IPA +A+  D++GAGDAFNGA+AAA
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  iatgqtiaqaatyaaafaSLAVEREGASNMPQHQQVVARL  400
            +A    +  A  YA+AFASLAVE+ GAS+MPQH QV+ R+
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

101) M621_24175 in NC_021659


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  235 bits (877),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 196/400 (49%), Positives = 287/400 (72%), Gaps = 3/400 (0%)

Query  1    MFLEERRNNILDYLDKYERVSVAYLATSFAVTKETIRSDLNVLAQLGLVQRCHGGAIVIR  60
            MF EERR+ I++ L K + VSV+ L+  + V++ETIRSDL  + + G++QRC GG+I+ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQAKLITETDGTFEVLLRRLESQKRKVQEPERGKNMRGKVCILGSFNVDIVARVARFP  120
             +L +KLITE    +   +     Q  K++  +  K   GKVC+LGSFN+D+ A V++FP
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA--GKVCVLGSFNIDVSATVPWFP  117

Query  121  KGGESLLALGSTLGPGGKGANQAMAASRAGAQVHFVSKVGKDQFSQFAFDHLSASEIHSF  180
            ++GES+LA    + PGGKGANQA+AA+ AGA  HF+ KVGKDQFS FA +H+  S I S+
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  TLYQSETEPTGNAIIYVSQQDGENMIAIYSGANKTITDEEVAAIAPELAGAEVLLVQLEN  240
            + YQ++  PTG+A+IYVS  DG+N+IAIY+GAN  +T +E+      +A ++V+L+QLE 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NFNATLNAMKLANALGIRVILNPAPYSADALQCLEYVDVITPNETEASLLSGVEVTDLNS  300
            N++A  + ++L++     ++LNPAPY+ +  + L  +D+ITPNETEAS+LSGV +TD+N 
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  AKEAAQRIAALGARRVIITMGARGAMILEGSQFQHIPAFPALSVdttgagdafngafaaa  360
            AK A++ I   G ++VIIT+GARG++I E ++   IPA +A+  D++GAGDAFNGA+AAA
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  iatgqtiaqaatyaaafaSLAVEREGASNMPQHQQVVARL  400
            +A    +  A  YA+AFASLAVE+ GAS+MPQH QV+ R+
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

102) SerAS12_4732 in NC_015566


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  234 bits (872),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 196/402 (49%), Positives = 290/402 (73%), Gaps = 7/402 (1%)

Query  1    MFLEERRNNILDYLDKYERVSVAYLATSFAVTKETIRSDLNVLAQLGLVQRCHGGAIVIR  60
            MF EERR+ I++ L K + VSV+ L+  + V++ETIRSDL  + + G++QRC GG+I+ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQAKLITET--DGTFEVLLRRLESQKRKAQEPERGKNMRGKVCILGSFNVDIVARVAR  118
             +L +KLITE   D +  +     +  K + ++P ++    GKVC+LGSFN+D+ A V++
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA----GKVCVLGSFNIDVSATVPW  115

Query  119  FPKGGESLLALGSTLGPGGKGANQAMAASRAGALVHFVSKVGKDQFSQFAFDHLSASEIH  178
            FP++GES+LA    + PGGKGANQA+AA+ AGA  HF+ KVGKDQFS FA +H+  S I 
Sbjct  116  FPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGIT  175

Query  179  SFTLYQSETEPTGNAIIYVSQQDGENMIAIYSGANKTITDEEVAAIAPELAGAEVLLVQL  238
            S++ YQ++  PTG+A+IYVS  DG+N+IAIY+GAN  +T +E+      +A ++V+L+QL
Sbjct  176  SYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQL  235

Query  239  ENNFNATLNAMKLANALGIRVILNPAPYSADALQCLEYVDVITPNETEASLLSGVEVTDL  298
            E N++A  + ++L++     ++LNPAPY+ +  + L  +D+ITPNETEAS+LSGV +TD+
Sbjct  236  ETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDI  295

Query  299  NSAKEAAQRIAGLGARRVIITMGARGAMILEGSQFQHIPAFPALSVdttgagdafngafa  358
            N AK A++ I   G ++VIIT+GARG++I E ++   IPA +A+  D++GAGDAFNGA+A
Sbjct  296  NDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALA  355

Query  359  aaiatgqtiaqaatyaaafaSLAVEREGASNMPQHQQVVARL  400
            AA+A    +  A  YA+AFASLAVE+ GAS+MPQH QV+ R+
Sbjct  356  AALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

103) SerAS13_4732 in NC_017573


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  234 bits (872),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 196/402 (49%), Positives = 290/402 (73%), Gaps = 7/402 (1%)

Query  1    MFLEERRNNILDYLDKYERVSVAYLATSFAVTKETIRSDLNVLAQLGLVQRCHGGAIVIR  60
            MF EERR+ I++ L K + VSV+ L+  + V++ETIRSDL  + + G++QRC GG+I+ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQAKLITET--DGTFEVLLRRLESQKRKAQEPERGKNMRGKVCILGSFNVDIVARVAR  118
             +L +KLITE   D +  +     +  K + ++P ++    GKVC+LGSFN+D+ A V++
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA----GKVCVLGSFNIDVSATVPW  115

Query  119  FPKGGESLLALGSTLGPGGKGANQAMAASRAGALVHFVSKVGKDQFSQFAFDHLSASEIH  178
            FP++GES+LA    + PGGKGANQA+AA+ AGA  HF+ KVGKDQFS FA +H+  S I 
Sbjct  116  FPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGIT  175

Query  179  SFTLYQSETEPTGNAIIYVSQQDGENMIAIYSGANKTITDEEVAAIAPELAGAEVLLVQL  238
            S++ YQ++  PTG+A+IYVS  DG+N+IAIY+GAN  +T +E+      +A ++V+L+QL
Sbjct  176  SYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQL  235

Query  239  ENNFNATLNAMKLANALGIRVILNPAPYSADALQCLEYVDVITPNETEASLLSGVEVTDL  298
            E N++A  + ++L++     ++LNPAPY+ +  + L  +D+ITPNETEAS+LSGV +TD+
Sbjct  236  ETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDI  295

Query  299  NSAKEAAQRIAGLGARRVIITMGARGAMILEGSQFQHIPAFPALSVdttgagdafngafa  358
            N AK A++ I   G ++VIIT+GARG++I E ++   IPA +A+  D++GAGDAFNGA+A
Sbjct  296  NDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALA  355

Query  359  aaiatgqtiaqaatyaaafaSLAVEREGASNMPQHQQVVARL  400
            AA+A    +  A  YA+AFASLAVE+ GAS+MPQH QV+ R+
Sbjct  356  AALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

104) SerAS9_4731 in NC_015567


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  234 bits (872),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 196/402 (49%), Positives = 290/402 (73%), Gaps = 7/402 (1%)

Query  1    MFLEERRNNILDYLDKYERVSVAYLATSFAVTKETIRSDLNVLAQLGLVQRCHGGAIVIR  60
            MF EERR+ I++ L K + VSV+ L+  + V++ETIRSDL  + + G++QRC GG+I+ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RSLQAKLITET--DGTFEVLLRRLESQKRKAQEPERGKNMRGKVCILGSFNVDIVARVAR  118
             +L +KLITE   D +  +     +  K + ++P ++    GKVC+LGSFN+D+ A V++
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA----GKVCVLGSFNIDVSATVPW  115

Query  119  FPKGGESLLALGSTLGPGGKGANQAMAASRAGALVHFVSKVGKDQFSQFAFDHLSASEIH  178
            FP++GES+LA    + PGGKGANQA+AA+ AGA  HF+ KVGKDQFS FA +H+  S I 
Sbjct  116  FPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGIT  175

Query  179  SFTLYQSETEPTGNAIIYVSQQDGENMIAIYSGANKTITDEEVAAIAPELAGAEVLLVQL  238
            S++ YQ++  PTG+A+IYVS  DG+N+IAIY+GAN  +T +E+      +A ++V+L+QL
Sbjct  176  SYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQL  235

Query  239  ENNFNATLNAMKLANALGIRVILNPAPYSADALQCLEYVDVITPNETEASLLSGVEVTDL  298
            E N++A  + ++L++     ++LNPAPY+ +  + L  +D+ITPNETEAS+LSGV +TD+
Sbjct  236  ETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDI  295

Query  299  NSAKEAAQRIAGLGARRVIITMGARGAMILEGSQFQHIPAFPALSVdttgagdafngafa  358
            N AK A++ I   G ++VIIT+GARG++I E ++   IPA +A+  D++GAGDAFNGA+A
Sbjct  296  NDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALA  355

Query  359  aaiatgqtiaqaatyaaafaSLAVEREGASNMPQHQQVVARL  400
            AA+A    +  A  YA+AFASLAVE+ GAS+MPQH QV+ R+
Sbjct  356  AALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

105) STM3547.Sc in NC_003197


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  230 bits (857),  Expect = 9e-62, Method: Compositional matrix adjust.
 Identities = 158/302 (53%), Positives = 228/302 (76%), Gaps = 0/302 (0%)

Query  3    NNVCVIGSFNVDIISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITKV  62
             +VCV+GSFN+D+ + +P++P +GES+LA +F F PGGKG NQALAA+ A++  HFI KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GSDHFSDYAINFINSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAIYPGANMTISPD  122
            G D+FS +A+N I  S I     YQT  + TG+A I V++  GDN+IAIYPGANM ++ +
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EITIQKEAIVHSDIVLVQLETNYEALQQTIRLAQKNDIPVIINPAPYNDMVNTIIDNIDY  182
            EI  Q   I +SD++L+QLETN EAL + IRL+++++  +++NPAPY   V  ++ +ID 
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  ITPNETEAGLLANMAVNDIESAKCAAKIIHQKGVKNTIITLGSKGSLAYDGTQFIYSPAF  242
            ITPNETEA++L+ +++ DI+ AK A++II Q GVK+ IITLG++GSL  + ++ +Y PA 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PAVVKNTAGAGDAFNGALASGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHR  302
            +AVVK++AGAGDAFNGALA++LA+   + +A+ YASAFASLAVE   AS MP++  VLHR
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHR  396

Query  303  IQ  304
            ++
Sbjct  397  MR  398

106) SL1344_3513 in NC_016810


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  230 bits (857),  Expect = 9e-62, Method: Compositional matrix adjust.
 Identities = 158/302 (53%), Positives = 228/302 (76%), Gaps = 0/302 (0%)

Query  3    NNVCVIGSFNVDIISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITKV  62
             +VCV+GSFN+D+ + +P++P +GES+LA +F F PGGKG NQALAA+ A++  HFI KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GSDHFSDYAINFINSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAIYPGANMTISPD  122
            G D+FS +A+N I  S I     YQT  + TG+A I V++  GDN+IAIYPGANM ++ +
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EITIQKEAIVHSDIVLVQLETNYEALQQTIRLAQKNDIPVIINPAPYNDMVNTIIDNIDY  182
            EI  Q   I +SD++L+QLETN EAL + IRL+++++  +++NPAPY   V  ++ +ID 
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  ITPNETEAGLLANMAVNDIESAKCAAKIIHQKGVKNTIITLGSKGSLAYDGTQFIYSPAF  242
            ITPNETEA++L+ +++ DI+ AK A++II Q GVK+ IITLG++GSL  + ++ +Y PA 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PAVVKNTAGAGDAFNGALASGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHR  302
            +AVVK++AGAGDAFNGALA++LA+   + +A+ YASAFASLAVE   AS MP++  VLHR
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHR  396

Query  303  IQ  304
            ++
Sbjct  397  MR  398

107) W5S_4283 in NC_017845


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  223 bits (832),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 191/400 (48%), Positives = 276/400 (69%), Gaps = 3/400 (0%)

Query  1    MFLEERRNQILAYLAKHERASVDYLATAFAVSKETIRSDLNELARLHLIQRCYGGAIIVR  60
            MF EERR+ I+  L K++  SV  L+  + VS+ETIRSDL  + +  ++QRCYGG+I+ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RLLQSELIAPSGENFEVLLKRLEKQNRHQTSKQKGNSMNGKVCILGSFNVDIVAKVMRFP  120
              L   +     +    +   ++++ + +  + K     GKVC+LGSFN+D+ A V +FP
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPK---KAGKVCVLGSFNIDVSATVPWFP  117

Query  121  KGGESIMAQGSAIGPGGKGANQAMAASRAGAQVYFIAKVGTDQFSQFAYDHFTASDIHSF  180
            ++GESI+A   ++ PGGKGANQA+AA+ AGA   FI KVG DQFS FA +H+  S+I S+
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  KLYQSDSEPTGNAIIYVSQQNGENMIAIHPGANQTITDDEVAAIASELTTSDVLLVQLEN  240
              YQ+D  PTG+A+IYVS  +G+N+IAI PGAN  +T +E+      ++ SDV+L+QLE 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NFSATLNAIKLAHTLGKKVILNPAPYSSEILPYLDYLDVITPNETEASLLSGIDIHDVDD  300
            N+ A  + I+L+    K ++LNPAPY+ ++   L  +D+ITPNETEAS+LSG+ I D++D
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  AKEAALKIAALGAKRVIITMGSRGALLLDGKQFQHIPAFPALGVdttgagdafngafaaa  360
            AK A+  I   G K+VIIT+G+RG+L+ +  +   IPA +A+  D++GAGDAFNGA+AAA
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  langQSLVQaatyasafaslaVEREGASNMPEHQQVIARL  400
            LA    +V A  YASAFASLAVE+ GAS+MP+H QV+ R+
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

108) Pecwa_4124 in NC_013421


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  223 bits (832),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 191/400 (48%), Positives = 276/400 (69%), Gaps = 3/400 (0%)

Query  1    MFLEERRNQILAYLAKHERASVDYLATAFAVSKETIRSDLNELARLHLIQRCYGGAIIVR  60
            MF EERR+ I+  L K++  SV  L+  + VS+ETIRSDL  + +  ++QRCYGG+I+ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RLLQSELIAPSGENFEVLLKRLEKQNRHQTSKQKGNSMNGKVCILGSFNVDIVAKVMRFP  120
              L   +     +    +   ++++ + +  + K     GKVC+LGSFN+D+ A V +FP
Sbjct  61   DALSKLITENKIDISSTIATPIHQDAKLRRENPK---KAGKVCVLGSFNIDVSATVPWFP  117

Query  121  KGGESIMAQGSAIGPGGKGANQAMAASRAGAQVYFIAKVGTDQFSQFAYDHFTASDIHSF  180
            ++GESI+A   ++ PGGKGANQA+AA+ AGA   FI KVG DQFS FA +H+  S+I S+
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  KLYQSDSEPTGNAIIYVSQQNGENMIAIHPGANQTITDDEVAAIASELTTSDVLLVQLEN  240
              YQ+D  PTG+A+IYVS  +G+N+IAI PGAN  +T +E+      ++ SDV+L+QLE 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NFSATLNAIKLAHTLGKKVILNPAPYSSEILPYLDYLDVITPNETEASLLSGIDIHDVDD  300
            N+ A  + I+L+    K ++LNPAPY+ ++   L  +D+ITPNETEAS+LSG+ I D++D
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  AKEAALKIAALGAKRVIITMGSRGALLLDGKQFQHIPAFPALGVdttgagdafngafaaa  360
            AK A+  I   G K+VIIT+G+RG+L+ +  +   IPA +A+  D++GAGDAFNGA+AAA
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  langQSLVQaatyasafaslaVEREGASNMPEHQQVIARL  400
            LA    +V A  YASAFASLAVE+ GAS+MP+H QV+ R+
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRM  397

109) ECO103_2457 in NC_013353


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  218 bits (811),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 154/303 (51%), Positives = 226/303 (75%), Gaps = 0/303 (0%)

Query  3    SQVCVIGSFNVDIISYLPRLPTIGESLLASNFIFSPGGKGCNQALAASFADTDVYFITKV  62
            ++VCV+GSFN+D+ + +P++P  GES+LAS+F F PGGKG NQALAA+ A++   FI KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GTDHFSDYAINFMNSSKIYKSIIYQTKETQTGTATILVNEGTGDNVIAIYPGANMTMSSD  122
            G D+FS +A+N +  S I     YQT  + TG+A I V+   GDN+IAIYPGANM ++++
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EITIQKEAIINSDVILLQLETNYTALQQAITLAQKNSIPVIINPAPYNDIVNELIQDVDY  182
            EI  Q   I +SDV+L+QLETN  AL + I L+++++  +++NPAPY   V +L+ D+D 
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  ITPNETEAGLLSGIDVHDLESAKRAAEAIHNKGVKNTVITLGSKGSLAFDGKKFIHSPAF  242
            ITPNETEA++LSG+ + D++ AK+A++ I + GVK+ +ITLG++GSL  +  + +  PA 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PAVVKNTAGAGDAFNGALASGLAKGKSLESALCYASAFASLAVETSNASDMPEHESVIHR  302
            +AVVK++AGAGDAFNGALA++LA+   + +A+ YASAFASLAVE   AS MP+H  V+HR
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHR  396

Query  303  IQS  305
            +++
Sbjct  397  MRT  399

110) CE10_2296 in NC_017646


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  218 bits (811),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 154/303 (51%), Positives = 226/303 (75%), Gaps = 0/303 (0%)

Query  3    SQVCVIGSFNVDIISYLPRLPTIGESLLASNFIFSPGGKGCNQALAASFADTDVYFITKV  62
            ++VCV+GSFN+D+ + +P++P  GES+LAS+F F PGGKG NQALAA+ A++   FI KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GTDHFSDYAINFMNSSKIYKSIIYQTKETQTGTATILVNEGTGDNVIAIYPGANMTMSSD  122
            G D+FS +A+N +  S I     YQT  + TG+A I V+   GDN+IAIYPGANM ++++
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EITIQKEAIINSDVILLQLETNYTALQQAITLAQKNSIPVIINPAPYNDIVNELIQDVDY  182
            EI  Q   I +SDV+L+QLETN  AL + I L+++++  +++NPAPY   V +L+ D+D 
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  ITPNETEAGLLSGIDVHDLESAKRAAEAIHNKGVKNTVITLGSKGSLAFDGKKFIHSPAF  242
            ITPNETEA++LSG+ + D++ AK+A++ I + GVK+ +ITLG++GSL  +  + +  PA 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PAVVKNTAGAGDAFNGALASGLAKGKSLESALCYASAFASLAVETSNASDMPEHESVIHR  302
            +AVVK++AGAGDAFNGALA++LA+   + +A+ YASAFASLAVE   AS MP+H  V+HR
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHR  396

Query  303  IQS  305
            +++
Sbjct  397  MRT  399

111) rbsK in NC_017663


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  218 bits (811),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 154/303 (51%), Positives = 226/303 (75%), Gaps = 0/303 (0%)

Query  3    SQVCVIGSFNVDIISYLPRLPTIGESLLASNFIFSPGGKGCNQALAASFADTDVYFITKV  62
            ++VCV+GSFN+D+ + +P++P  GES+LAS+F F PGGKG NQALAA+ A++   FI KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GTDHFSDYAINFMNSSKIYKSIIYQTKETQTGTATILVNEGTGDNVIAIYPGANMTMSSD  122
            G D+FS +A+N +  S I     YQT  + TG+A I V+   GDN+IAIYPGANM ++++
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EITIQKEAIINSDVILLQLETNYTALQQAITLAQKNSIPVIINPAPYNDIVNELIQDVDY  182
            EI  Q   I +SDV+L+QLETN  AL + I L+++++  +++NPAPY   V +L+ D+D 
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  ITPNETEAGLLSGIDVHDLESAKRAAEAIHNKGVKNTVITLGSKGSLAFDGKKFIHSPAF  242
            ITPNETEA++LSG+ + D++ AK+A++ I + GVK+ +ITLG++GSL  +  + +  PA 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PAVVKNTAGAGDAFNGALASGLAKGKSLESALCYASAFASLAVETSNASDMPEHESVIHR  302
            +AVVK++AGAGDAFNGALA++LA+   + +A+ YASAFASLAVE   AS MP+H  V+HR
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHR  396

Query  303  IQS  305
            +++
Sbjct  397  MRT  399

112) Ser39006_0664 in NC_022268


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  218 bits (812),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 164/406 (41%), Positives = 266/406 (66%), Gaps = 3/406 (0%)

Query  1    MFVEERRKKIFNTLRSQGQATVTSLARQYGVTKETIRSDLTQLEASGLVQRCHGGAMIVE  60
            MF EERR  I+N L  +   +V+ L+  Y V++ETIRSDL  ++ SG++QRC GG+++  
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   HVVKPLSWQTMGLNVSALMQELVSKNQDFLYKDKGHPVSGKVCVLGSFSVDIIAVVDHFP  120
            + +  L  +   +++S+ +   + ++  +  +      +GKVCVLGSF++D+ A V  FP
Sbjct  61   DALSKLITENK-IDISSTIATPIHQDAKL--RRENPKKAGKVCVLGSFNIDVSATVPWFP  117

Query  121  LEGELLMAKENRFGPGGKGANQALAASRAGGNVHFIAKVGCDHFSTYAHDHLVSSGIDSF  180
              GE ++A +  F PGGKGANQALAA+ AG+  HFI KVG D+FS++A +H++ SGI S+
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  TLYQSSTVPTGSAMTYFSQETHSNITAVYLGANITITQEEIDAVLLYLRDTDILLIQGEI  240
            + YQ+   PTGSA+ Y S     NI A+Y GAN+ +T +EI+    Y+ ++D++L+Q E 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NVEAQLKAVKFAHSVGTQIIFNPAPYSNEAKMIYPYVDYIIPNKIEAQKWSGIEISDLAS  300
            N+EA    ++++      I++NPAPY+++   + + +D I PN  EA   SG+ I+D+  
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  AKKAMKNIAGPEKKKVILNLGKKGCLVFDGSIFQHLPALPSVMVDAMGAGDAFNGSLAAE  360
            AKKA + I  +  KKVI+ LG +G L+ + +    +PA ++V+ DA GAGDAFNG+LAA 
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  LAKGSQLIDAVNYALAFTAVFVEHEGVSNMPTHEKVTRRLEMHHGN  406
            LA+ ++++ A++YA AF+++ VE+ G S+MP H +V +R+  +  +
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQSNK  403

113) EAE_07450 in NC_015663


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  213 bits (792),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 190/402 (48%), Positives = 286/402 (72%), Gaps = 3/402 (0%)

Query  1    MFLEERRKHILKYLNDHERGFVNYFAAYFSVSKETIRSDLNILAEMGLVQRCYGGAIISR  60
            MF EERR  I++ L  ++   V+ ++  + VS+ETIRSDL  +   G++QRCYGG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   HNLKAELISETGDSFGVLLQPINHRKPTASGQQKGKSMNGKVCVFGSFNVDIVARVERFP  120
            + L + LI+E    ++  +    H+ +    ++  K+  GKVCV+GSFN+D+ A V +FP
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA--GKVCVLGSFNIDVSATVPWFP  117

Query  121  RggesllalasslgpggkgaNQATAASKAGAQVHFVAKVGKDQFSHLAADHLTRSEIHSY  180
            ++GES+LA   ++ PGGKGANQA AA++AGA  HF+ KVGKDQFS +A +H+ +S I SY
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  TLYQSESEPTGNAIIYVSQENGENMIAIYSGANTTITHNEIEAIIPELSASDVLLVQLEN  240
            + YQ++  PTG+A+IYVS  +G+N+IAIY+GAN  +T +EI+     ++ SDV+L+QLE 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NFDATHSLIKIARELGKTVILNPAPYSAEIIKSIPYIDVITPNETEASLLSGIDIHDVDT  300
            N++A   +I+++++  K ++LNPAPY+ ++   ++ ID+ITPNETEAS+LSG+ I D++ 
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  AKEAALRIAELGAKKVLITMGSRGALLLDNRQFSQIRVFPAVTVDTTGAGDafngalaas  360
            AK A+  I + G KKV+IT+G+RG+L+ ++ +   I   +AV  D++GAGDAFNGALAA+
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  laagnTLVQaatwasafaslaVELEGASNMPDFAQANARLRT  402
            LA    +V A   ASAFASLAVE  GAS+MP+  Q   R+RT
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

114) ST548_p4542 in NC_020181


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  211 bits (786),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 190/402 (48%), Positives = 286/402 (72%), Gaps = 3/402 (0%)

Query  1    MFLEERRKHILKYLNDHERGFVNYFAAYFSVSKETIRSDLNILAEMGLVHRCYGGAIISR  60
            MF EERR  I++ L  ++   V+ ++  + VS+ETIRSDL  +   G+++RCYGG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   HNLKAELISETGDSFGVLLQPINHRKPTASGQQKGKSMNGKVCVFGSFNVDIVARVERFP  120
            + L + LI+E    ++  +    H+ +    ++  K+  GKVCV+GSFN+D+ A V +FP
Sbjct  61   DAL-SKLITENKIDISSTIATPIHQDAKLRRENPKKA--GKVCVLGSFNIDVSATVPWFP  117

Query  121  RggesllalasslgpggkgaNQATAASKAGAQVHFVAKVGKDQFSHLAADHLTRSEIHSY  180
            ++GES+LA   ++ PGGKGANQA AA++AGA  HF+ KVGKDQFS +A +H+ +S I SY
Sbjct  118  QSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSY  177

Query  181  TLYQSESEPTGNAIIYVSQENGENMIAIYSGANTTITHNEIEAIIPELSASDVLLVQLEN  240
            + YQ++  PTG+A+IYVS  +G+N+IAIY+GAN  +T +EI+     ++ SDV+L+QLE 
Sbjct  178  SAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLET  237

Query  241  NFDATHSLIKKARELGKTVILNPAPYSAEIIKSIPYIDVITPNETEASLLSGIDIHDVDT  300
            N++A   +I+ +++  K ++LNPAPY+ ++   ++ ID+ITPNETEAS+LSG+ I D++ 
Sbjct  238  NIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIND  297

Query  301  AKEAALRIAELGAKKVLITMGSRGALLLDNRQFSQIRAFPAVTVDTTGAGDafngalaas  360
            AK A+  I + G KKV+IT+G+RG+L+ ++ +   I A +AV  D++GAGDAFNGALAA+
Sbjct  298  AKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAA  357

Query  361  laagnTLVQaatwasafaslaVELEGASNMPDFAQANARLRT  402
            LA    +V A   ASAFASLAVE  GAS+MP+  Q   R+RT
Sbjct  358  LARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRT  399

115) Ser39006_0840 in NC_022268


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  205 bits (763),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 149/323 (47%), Positives = 218/323 (68%), Gaps = 11/323 (3%)

Query  1    MFLEERRNKILEYLDKYDRASMKYLAHLFDVTKETIRSDLNVLASRNLIQRCHGGAMVIR  60
            MF EERR+ I++ L K +  S+  L++L+ V++ETIRSDL  +    ++QRC GG+++ R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RHLQSELITETGKDFEVLLKSIKKP-ERNIAIKNKGNTMNGKVCILGSFNVDIIARVERF  119
              L S LITE   D+     +I  P +++  ++       GKVC+LGSFN+D+ A V +F
Sbjct  61   DAL-SKLITENKIDIS---STIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWF  116

Query  120  PKGGESLLAQGSALGPGGKGANQAMAASRAGAKVHFVSKVGKDQFSHFAYEHLSKSEIHS  179
            P++GES+LA   ++ PGGKGANQA+AA+ AGA  HF+ KVGKDQFS FA +H+ +S I S
Sbjct  117  PQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITS  176

Query  180  FKLYQSDTEPTGNAIIYVSQQNGENMITIYPGANKTITDEEIAEIMPELENSDVLLLQLE  239
            +  YQ+D  PTG+A+IYVS  +G+N+I+IYPGAN  +T +EI E    + +SDV+L+QLE
Sbjct  177  YSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLE  236

Query  240  NNFSSLLRVMKLAKALNTKIILNPAPYSSDVLSCLDYVDVITPNETEASLLSNIEVNDLS  299
             N+ +L   ++L+K  N  I+LNPAPY+ +V   L  +D+ITPNETEAS+LS + + D++
Sbjct  237  TNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIN  296

Query  300  SAISA------ITSRKIPIVLGA  316
             A  A         +K+ I LGA
Sbjct  297  DAKKAGNIILQSGVKKVIITLGA  319

116) EFER_0074 in NC_011740


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  205 bits (761),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 148/348 (43%), Positives = 239/348 (69%), Gaps = 5/348 (1%)

Query  1    MYRDTRREHIVRLLRNKEECTVSDLAHYFSVTKETIRTDLAWLQKRGMVIRHHGGVSLKK  60
            M+++ RR+ I+ LL + +  +VS L++ + V++ETIR+DL  +QK GM+ R  GG  L++
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   HLMQNALSQQEYVDMSLLIKQQQQGIGFLTSLDDKGHRMAGKVCVLGSFNVDIVAKVYRF  120
            + + + ++++     S +    +Q+    + L     + AGKVCVLGSFN+D+ A V +F
Sbjct  61   DALSKLITENKIDISSTIATPIHQD----AKLRRENPKKAGKVCVLGSFNIDVSATVPWF  116

Query  121  PHEGETLVAKETTMGPGGKGANQALAAHRAGAQIHFACKIGRDQFNHFARNHIESIGIGS  180
            P+ GE+++A +    PGGKGANQALAA+ AGA  HF  K+G+DQF+ FA NHI   GI S
Sbjct  117  PQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITS  176

Query  181  FTFYESERSTTGCAVIYVNN-EGENMIAMSPGANHELSDNDIIQLSHFIAESNVFIVQME  239
            ++ Y+++++ TG A+IYV+  +G+N+IA+ PGAN  L+ ++I +  ++IAES+V ++Q+E
Sbjct  177  YSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLE  236

Query  240  NNLAATHLALKCAKQMQVTTILNPAPWSIDVATLLPYVDIVTPNETEASAMSGMVINDIS  299
             N+ A    ++ +KQ +   +LNPAP + +V+ LL+ +DI+TPNETEAS +SG+ I DI+
Sbjct  237  TNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIN  296

Query  300  DAMKAAKHIHNAGQCSVIITMGKQGALIYDGQQCAHIPAFSAVAVDTT  347
            DA KA++ I ++G   VIIT+G +G+LI +  +   IPA SAV  D++
Sbjct  297  DAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAA  344

117) W5S_3859 in NC_017845


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  203 bits (755),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 139/307 (46%), Positives = 225/307 (74%), Gaps = 1/307 (0%)

Query  3    GKVCVFGSFNLDIVAGMSRFPQPGESLIAHRSMMGPGGKGANQATAALRAGARVHYIGKI  62
            GKVCV+GSFN+D+ A +++FPQ+GES++A +    PGGKGANQA AA  AGA  H+I K+
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GNDDFGLFARRHLEKTGFDAITLFTCKEKPTGNALIYVAGNDAENMISVYPGANLMVTAA  122
            G+D+F+ FA  H+ ++G+ + + +     PTG+ALIYV++ D++N+I++YPGAN+M+T+ 
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EIARCQPTVAEADILLIQLENNLSAIQRIVDSAQAANTFVIMNPAPWQKVSDALLSKIDL  182
            EI   +  +AE+D++L+QLE N+ A+  ++  ++  N  +++NPAP  K    LLS ID+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  LTPNSTEATLLTGISVTDIDSAQRAAAVLHQKGVRQLVITLGMQGALLSTGDTQSHIPAF  242
            +TPN TEA++L+G+++TDI+ A++A+ ++ Q GV++++ITLG +G+L+        IPA 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PAQPKDTTGAGDAFNgalaarlaagDSLEQAALFSSAYASLCVEREGAAHAMPRYEEALE  302
            +A  KD++GAGDAFNGALAA LA    +  A  ++SA+ASL VE+ GA+ +MP+  + L+
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGAS-SMPQHLQVLH  395

Query  303  RMQQHAE  309
            RM+ +++
Sbjct  396  RMRTQSN  402

118) Pecwa_3718 in NC_013421


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  203 bits (753),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 141/311 (46%), Positives = 226/311 (73%), Gaps = 2/311 (0%)

Query  3    GKVCVFGSFNLDIVAGMSRFPQPGESLIAHRSMMGPGGKGANQATAALRAGARVHYIGKI  62
            GKVCV+GSFN+D+ A +++FPQ+GES++A +    PGGKGANQA AA  AGA  H+I K+
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GNDDFGLFARRHLEKTGFDAITLFTCKEKPTGNALIYVAGNDAENMISVYPGANLMVTAA  122
            G+D+F+ FA  H+ ++G+ + + +     PTG+ALIYV++ D++N+I++YPGAN+M+T+ 
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EIARCQPTVAAADILLIQLENNLSAIQRIVDSAQAANTFVIMNPAPWQKVSDALLSKIDL  182
            EI   +  +A +D++L+QLE N+ A+  ++  ++  N  +++NPAP  K    LLS ID+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  LTPNSTEATLLTGISVTDIDSAQRAAAVLHQKGVRQLVITLGMQGALLSTGDTQSHIPAF  242
            +TPN TEA++L+G+++TDI+ A++A+ ++ Q GV++++ITLG +G+L+        IPA 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PAQPKDTTGAGDAFNgalaarlaagDSLEQAALFSSAYASLCVEREGAAHAMPRYEEALE  302
            +A  KD++GAGDAFNGALAA LA    +  A  ++SA+ASL VE+ GA+ +MP+  + L+
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGAS-SMPQHLQVLH  395

Query  303  RMQ-QHAKLLH  312
            RM+ Q  K++H
Sbjct  396  RMRTQSNKVIH  406

119) E2348C_0066 in NC_011601


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  198 bits (736),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 146/348 (42%), Positives = 237/348 (69%), Gaps = 5/348 (1%)

Query  1    MYRDTRREHIVRLLRNKDECSVSDLANYFSVTKETIRTDLAWLQKRGVVSRHHGGVSLKK  60
            M+++ RR+ I+ LL + +  SVS L++ + V++ETIR+DL  +QK G++ R  GG  L++
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   HLMQNALSQQEYVDMSLLIKQQQQGIGYLTSLDDKGRRMVGKVCVLGSFNVDIVAKVYRF  120
            + + + ++++     S +    +Q+    + L     +  GKVCVLGSFN+D+ A V +F
Sbjct  61   DALSKLITENKIDISSTIATPIHQD----AKLRRENPKKAGKVCVLGSFNIDVSATVPWF  116

Query  121  PNEGETLVARETTMGPGGKGANQALAAHRAGAQIHFACKIGRDQFNHFARNHIESIGIDS  180
            P+ GE+++A +    PGGKGANQALAA+ AGA  HF  K+G+DQF+ FA NHI   GI S
Sbjct  117  PQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITS  176

Query  181  FTFYESELSTTGCAVIYVND-EGENMIAMSPGANHELSDNDIIQLSHFIAESDVFIVQME  239
            ++ Y+++ + TG A+IYV+  +G+N+IA+ PGAN  L+ ++I +  ++IAESDV ++Q+E
Sbjct  177  YSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLE  236

Query  240  NNLAATQLALKCAQKMQVTTILNPAPWSSDVATLLPFVDIVTPNETEASAMSGMVIDNIS  299
             N+ A    ++ +++ +   +LNPAP + +V+ LL+ +DI+TPNETEAS +SG+ I +I+
Sbjct  237  TNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIN  296

Query  300  DAVKAAKHIYNAGQCSVIITMGKRGALIYDGQQCAHIPAFSAVAVDTT  347
            DA KA++ I ++G   VIIT+G RG+LI +  +   IPA SAV  D++
Sbjct  297  DAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAA  344

120) ECNA114_0054 in NC_017644


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  197 bits (730),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 146/348 (42%), Positives = 237/348 (69%), Gaps = 5/348 (1%)

Query  1    MYRDTRREYIVRLLRNKDECSVSDLANYFSVTKETIRTDLAWLQKRGVVSRHHGGVSLKK  60
            M+++ RR+ I+ LL + +  SVS L++ + V++ETIR+DL  +QK G++ R  GG  L++
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   HLMQNALSQQEYVDMSLLIKQQQQGIGYLTSLDDKGRRMVGKVCVLGSFNVDIVAKVYRF  120
            + + + ++++     S +    +Q+    + L     +  GKVCVLGSFN+D+ A V +F
Sbjct  61   DALSKLITENKIDISSTIATPIHQD----AKLRRENPKKAGKVCVLGSFNIDVSATVPWF  116

Query  121  PNEGETLVARETTMGPGGKGANQALAAHRAGAQIHFACKIGRDQFNHFARNHIESIGIGS  180
            P+ GE+++A +    PGGKGANQALAA+ AGA  HF  K+G+DQF+ FA NHI   GI S
Sbjct  117  PQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITS  176

Query  181  FTFYESELSTTGCAVIYVND-EGENMIAMSPGANHELSDNDIIQLSHFIAESDVFIVQME  239
            ++ Y+++ + TG A+IYV+  +G+N+IA+ PGAN  L+ ++I +  ++IAESDV ++Q+E
Sbjct  177  YSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLE  236

Query  240  NNLAATQLALKCAQKMQVTTILNPAPWSSDVATLLPFVDIVTPNETEASAMSGMVIDNIS  299
             N+ A    ++ +++ +   +LNPAP + +V+ LL+ +DI+TPNETEAS +SG+ I +I+
Sbjct  237  TNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIN  296

Query  300  DAVKAAKHIYNAGQCSVIITMGKRGALIYDGQQCAHIPAFSAVAVDTT  347
            DA KA++ I ++G   VIIT+G RG+LI +  +   IPA SAV  D++
Sbjct  297  DAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAA  344

121) ECSF_0071 in NC_013654


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  197 bits (730),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 146/348 (42%), Positives = 237/348 (69%), Gaps = 5/348 (1%)

Query  1    MYRDTRREYIVRLLRNKDECSVSDLANYFSVTKETIRTDLAWLQKRGVVSRHHGGVSLKK  60
            M+++ RR+ I+ LL + +  SVS L++ + V++ETIR+DL  +QK G++ R  GG  L++
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   HLMQNALSQQEYVDMSLLIKQQQQGIGYLTSLDDKGRRMVGKVCVLGSFNVDIVAKVYRF  120
            + + + ++++     S +    +Q+    + L     +  GKVCVLGSFN+D+ A V +F
Sbjct  61   DALSKLITENKIDISSTIATPIHQD----AKLRRENPKKAGKVCVLGSFNIDVSATVPWF  116

Query  121  PNEGETLVARETTMGPGGKGANQALAAHRAGAQIHFACKIGRDQFNHFARNHIESIGIGS  180
            P+ GE+++A +    PGGKGANQALAA+ AGA  HF  K+G+DQF+ FA NHI   GI S
Sbjct  117  PQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITS  176

Query  181  FTFYESELSTTGCAVIYVND-EGENMIAMSPGANHELSDNDIIQLSHFIAESDVFIVQME  239
            ++ Y+++ + TG A+IYV+  +G+N+IA+ PGAN  L+ ++I +  ++IAESDV ++Q+E
Sbjct  177  YSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLE  236

Query  240  NNLAATQLALKCAQKMQVTTILNPAPWSSDVATLLPFVDIVTPNETEASAMSGMVIDNIS  299
             N+ A    ++ +++ +   +LNPAP + +V+ LL+ +DI+TPNETEAS +SG+ I +I+
Sbjct  237  TNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDIN  296

Query  300  DAVKAAKHIYNAGQCSVIITMGKRGALIYDGQQCAHIPAFSAVAVDTT  347
            DA KA++ I ++G   VIIT+G RG+LI +  +   IPA SAV  D++
Sbjct  297  DAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAA  344

122) Q7S_17560 in NC_017047


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  195 bits (725),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 135/302 (45%), Positives = 222/302 (74%), Gaps = 1/302 (0%)

Query  4    GKVCVFGSFNLDIVAGMARFPKPGESLIARNSMMGAGGKGANQAVAALRAGARVHYIGKV  63
            GKVCV+GSFN+D+ A +++FP++GES++A +    +GGKGANQA+AA  AGA  H+I KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  64   GRDDFGMFARRHLDSAGFDAVTLFSTSECPTGNALIYVAGADAENMIAVDPGANLTVTDE  123
            G+D+F+ FA  H+  +G+ + + + T   PTG+ALIYV++ D++N+IA+ PGAN+ +T +
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  124  EVEQCRPAVAAADILLTQLENNLPAIEKLIGIAKENDTYIILNPAPFQPVSDHLLSQVDL  183
            E+++ +  +A +D++L QLE N+ A+  +I ++K+++  I+LNPAP+     HLLS++D+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  184  LTPNATECTLLTGIEVRDIPSAQRAAHALHAKGIQALIITLGTQGALLSVNGETQIIHAC  243
            +TPN TE ++L+G+ + DI  A++A++ +   G++ +IITLG++G+L+  ++ T  I A 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  244  PAIPVDTTGAGDAFNGALASQLAAGATLREAAQFASAYASVCVERAGAAASMPTYEEAHE  303
            +A+  D++GAGDAFNGALA+ LA  A +  A Q+ASA+AS+ VE+ G A+SMP   +  +
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVG-ASSMPQHLQVLH  395

Query  304  RM  305
            RM
Sbjct  396  RM  397

123) Rahaq_3488 in NC_015061


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  195 bits (725),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 135/302 (45%), Positives = 222/302 (74%), Gaps = 1/302 (0%)

Query  4    GKVCVFGSFNLDIVAGMARFPKPGESLIARNSMMGAGGKGANQAVAALRAGARVHYIGKV  63
            GKVCV+GSFN+D+ A +++FP++GES++A +    +GGKGANQA+AA  AGA  H+I KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  64   GRDDFGMFARRHLDSAGFDAVTLFSTSECPTGNALIYVAGADAENMIAVDPGANLTVTDE  123
            G+D+F+ FA  H+  +G+ + + + T   PTG+ALIYV++ D++N+IA+ PGAN+ +T +
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  124  EVEQCRPAVAAADILLTQLENNLPAIEKLIGIAKENDTYIILNPAPFQPVSDHLLSQVDL  183
            E+++ +  +A +D++L QLE N+ A+  +I ++K+++  I+LNPAP+     HLLS++D+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  184  LTPNATECTLLTGIEVRDIPSAQRAAHALHAKGIQALIITLGTQGALLSVNGETQIIHAC  243
            +TPN TE ++L+G+ + DI  A++A++ +   G++ +IITLG++G+L+  ++ T  I A 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  244  PAIPVDTTGAGDAFNGALASQLAAGATLREAAQFASAYASVCVERAGAAASMPTYEEAHE  303
            +A+  D++GAGDAFNGALA+ LA  A +  A Q+ASA+AS+ VE+ G A+SMP   +  +
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVG-ASSMPQHLQVLH  395

Query  304  RM  305
            RM
Sbjct  396  RM  397

124) ENC_28190 in NC_021046


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  195 bits (725),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 142/340 (42%), Positives = 228/340 (68%), Gaps = 8/340 (2%)

Query  1    MLNKERHYAILTWLNRYERATVNQLAKVFNVTRETIRSDLNLLAQEGGIERCHGGAIIKR  60
            M++ ER+ AI+  L + +  +V++L+ +++V++ETIRSDL  + + G ++RC GG+I++R
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  61   RIFH---TQSVNNLDSNIIHFFDSAQSRKTIKSRHKGRKMKGKVCILGSFNVDIIANVDR  117
              +    T++  ++ S I     ++  ++  K R+   K  GKVC+LGSFN+D+ A V +
Sbjct  61   DALSKLITENKIDISSTI-----ATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPW  115

Query  118  FPQSGESIFSENTIIGPGGKGANQALAVSKCNVKTHFVGKVGNDQFSQMAFEHLSSSAID  177
            FPQSGESI++ +  + PGGKGANQALA ++    +HF+ KVG+DQFS  A +H+  S+I 
Sbjct  116  FPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGIT  175

Query  178  SFTLYQDKDQKTGTALIYVCQSDGENMIAISPGANRSITADEVEAITPEVKNADIFLTQL  237
            S++ YQ     TG+ALIYV   DG+N+IAI PGAN  +T++E++     + ++D+ L QL
Sbjct  176  SYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQL  235

Query  238  ENNLPATFRAIEIARRNGIKVVLNPAPWSSDVVSCLKNVDFLTPNETEASLLSGIHIVDL  297
            E N+ A    I +++++   ++LNPAP + +V   L ++D++TPNETEAS+LSG+ I D+
Sbjct  236  ETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDI  295

Query  298  asakeaaraikakGVGHVIITMGAKGALIYDGEQFIHIPA  337
              AK A+  I   GV  VIIT+GA+G+LI +  + + IPA
Sbjct  296  NDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPA  335

125) Rahaq2_3565 in NC_016818


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  194 bits (720),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 134/302 (45%), Positives = 221/302 (74%), Gaps = 1/302 (0%)

Query  4    GKVCVFGSFNLDIVAGMARFPKPGESLIARNSMMGAGGKGANQAVAALRAGARVHYIGKV  63
            GKVCV+GSFN+D+ A +++FP++GES++A +    +GGKGANQA+AA  AGA  H+I KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  64   GRDDFGMFARRHLDGAGFDAVTLFSTSECPTGNALIYVAGADAENMIAVDPGANLTVTDE  123
            G+D+F+ FA  H+  +G+ + + + T   PTG+ALIYV++ D++N+IA+ PGAN+ +T +
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  124  EVEQCRPAVAAADILLTQLENNLPAIEKLIGIAKDNDTYIILNPAPFQPVSDHLLAQVDL  183
            E+++ +  +A +D++L QLE N+ A+  +I ++K+++  I+LNPAP+     HLL+++D+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  184  LTPNATECTLLTGIEVCDIPSAQRAAHALHAKGIQALIITLGTQGALLSVNGETQIIHAC  243
            +TPN TE ++L+G+ + DI  A++A++ +   G++ +IITLG++G+L+  ++ T  I A 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  244  PATPVDTTGAGDAFNGALASQLAAGATLPEAAQFASAYASVCVERAGAAASMPTYEEARE  303
            +A   D++GAGDAFNGALA+ LA  A +  A Q+ASA+AS+ VE+ G A+SMP   +  +
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVG-ASSMPQHLQVLH  395

Query  304  RM  305
            RM
Sbjct  396  RM  397

126) ECIAI39_4374 in NC_011750


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  194 bits (722),  Expect = 7e-51, Method: Compositional matrix adjust.
 Identities = 140/345 (41%), Positives = 227/345 (66%), Gaps = 10/345 (2%)

Query  1    MFGKERQRQILAYLNKHERATVNQLAILFSVSKETIRNDLNLLAEQGGVERCHGGAII--  58
            MF  ER++ I+  L K++  +V++L+ L+ VS+ETIR+DL  +   G ++RC GG+I+  
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  59   --LRRIFHSQPVNNVGTSIEKFLNQVNWRKNSMTNKKGKIMISKVCILGSFNVDIIAKVD  116
              L +++  + ++ ++++I   ++Q     ++   +      +KVC+LGSFN+D+ A V 
Sbjct  61   DALSKLITENKID-ISSTIATPIHQ-----DAKLRRENPKKAGKVCVLGSFNIDVSATVP  114

Query  117  RFPKSGESILASNTIIGPGGKGANQAMAASKCPVQVHFVGKVGNDHFGQMAHDHLSSSDI  176
            +FP+SGESILAS+  + PGGKGANQA+AA++     HF+ KVG+D+F+  A +H+  S+I
Sbjct  115  WFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI  174

Query  177  RSFTLYQDEEHKTGSAIIYVSEPAGENKIAIYSGANQYITEAEVASIAGELTDAKIFLTQ  236
             S++ YQ +   TGSA+IYVS   G+N IAIY+GAN  +T  E+      ++++ + L Q
Sbjct  175  TSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQ  234

Query  237  LENNFEATTLALNMAHRSGVKTILNPAPYSDQAKECLQYVDYLTPNETEASLMSGVEIND  296
            LE N+EA T  + ++ +     +LNPAPY+ Q  + L  +D +TPNETEAS++SGV I D
Sbjct  235  LETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITD  294

Query  297  IESAKEAAQTIKSLGAKNIIITMGSQGALVYDGEQFTHIPALKAV  341
            I+ AK A++ I   G K++IIT+G++G+L+ +  +   IPA  AV
Sbjct  295  INDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAV  339

127) CE10_4664 in NC_017646


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  194 bits (720),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 140/345 (41%), Positives = 227/345 (66%), Gaps = 10/345 (2%)

Query  1    MFGKERQRQILAYLNKHERATVNQLAILFSVSKETIRNDLNLLAEQGGVERCHGGAII--  58
            MF  ER++ I+  L K++  +V++L+ L+ VS+ETIR+DL  +   G ++RC GG+I+  
Sbjct  1    MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNR  60

Query  59   --LRRIFHSQPVNNVGTSIEKFLNQVNWRKNSMTNKKGKIMISKVCILGSFNVDIIAKVD  116
              L +++  + ++ ++++I   ++Q     ++   +      +KVC+LGSFN+D+ A V 
Sbjct  61   DALSKLITENKID-ISSTIATPIHQ-----DAKLRRENPKKAGKVCVLGSFNIDVSATVP  114

Query  117  RFPKSGESILASNTIIGPGGKGANQAMAASKCPVLVHFVGKVGNDHFGQMAHDHLSSSDI  176
            +FP+SGESILAS+  + PGGKGANQA+AA++     HF+ KVG+D+F+  A +H+  S+I
Sbjct  115  WFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGI  174

Query  177  RSFTLYQDEEHKTGSAIIYVSEPAGENKIAIYSGANQYITEAEVASIAGELTDAKIFLTQ  236
             S++ YQ +   TGSA+IYVS   G+N IAIY+GAN  +T  E+      ++++ + L Q
Sbjct  175  TSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQ  234

Query  237  LENNFEATTLALNMAHRSGVKTILNPAPYSDQAKECLQYVDYLTPNETEASLMSGVEIND  296
            LE N+EA T  + ++ +     +LNPAPY+ Q  + L  +D +TPNETEAS++SGV I D
Sbjct  235  LETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITD  294

Query  297  IESAKEAAQTIKSLGAKNIIITMGSQGALVYDGEQFTHIPALKAV  341
            I+ AK A++ I   G K++IIT+G++G+L+ +  +   IPA  AV
Sbjct  295  INDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAV  339

128) swp_3807 in NC_011566


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  189 bits (701),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 142/329 (44%), Positives = 238/329 (73%), Gaps = 7/329 (2%)

Query  21   LDNLLSQ--LTSNASLSSPSAQTPSKRRGNEMNN-KVFILGSFNVDIVSTLERFPQPGET  77
            L +L+++  +  ++++++P  Q +  RR N  +  KV +LGSFN+D+ +T+ +FPQ+GE+
Sbjct  63   LSKLITENKIDISSTIATPIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGES  122

Query  78   LHALSNNIG--AGGKGANQAYATAKAGANVTFMTKIGKDQFSHFAKEHLATTGINNTIIA  135
            +  L++++G  +GGKGANQA A+ +AGA   F+ K+GKDQFS FA +H+  +GI +    
Sbjct  123  I--LASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQFSAFAMNHIIQSGITSYSAY  180

Query  136  ESDNSPTGNALIYVCQQTGENMIAVHSGANTeitqqeiiqaeqhiVGADLLLTQLENNID  195
            ++D++PTG+ALIYV    G+N+IA+ +GAN  +T QEI + ++ I  +D++L QLE NI+
Sbjct  181  QTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE  240

Query  196  AVKRAMQIAHAHGVSVVLNPAPYHNETPSLLEYVDMVTPNETEASLMTGIEVTDLDSAKQ  255
            A+   ++++  +   ++LNPAPY ++   LL  +D++TPNETEAS+++G+ +TD++ AK+
Sbjct  241  ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKK  300

Query  256  AAIKISQMGVNKVVITRGAQGVLLYENGRFSEVAAVKCVVTDTTGAGDAFNGALVAQIVK  315
            A+  I Q GV+KV+IT GA+G L+ E++R   ++A   VV D++GAGDAFNGAL A + +
Sbjct  301  AGNIILQSGVKKVIITLGARGSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALAR  360

Query  316  GDSLLDAARFANAYASLAVEREGAANMPD  344
               ++ A ++A+A+ASLAVE+ GA++MP+
Sbjct  361  QADMVAAIQYASAFASLAVEQVGASSMPQ  389

129) rbsK in NC_013956


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  188 bits (697),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 134/307 (44%), Positives = 218/307 (72%), Gaps = 1/307 (0%)

Query  3    GKVCVFGSFNLDIVAGMARFPLPGESLIAQHSMMGPGGKGANQATAALRAGARVHYIGKV  62
            GKVCV+GSFN+D+ A +++FP +GES++A +    PGGKGANQA AA  AGA  H+I KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GNDDFGIFARRHLEKTGFDAITLFTCKEKPTGNALIYVAGNDAENMISVYPGANLTVSAA  122
            G+D+F+ FA  H+ ++G+ + + +     PTG+ALIYV++ D++N+I++YPGAN+ +++ 
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EVTRCRPTVAAADILLVQLENNLSAIQRMIDHARAANTFVILNPAPFQKISDALLAKVDL  182
            E+   +  +A +D++L+QLE N+ A+   I  ++  N  ++LNPAP+ K    LL+ +D+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  LTPNSTEAMLLTGVKVTDLASARQAALVLHRKGARQVIITLGTAGALLSDGQQLLHIPVF  242
            +TPN TEA +L+GV +TD+  A++A+ ++ + G ++VIITLG+ G+L+ +  + L IP  
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PATPLDTTGAGDAFNgalaarlaagVSLEQaalfaaafaSLCVERQGAAHAMPAYADALA  302
            +A   D++GAGDAFNGALAA LA    +  A  +A+AFASL VE+ GA+ +MP   + L 
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGAS-SMPQHLQVLH  395

Query  303  RLQSHPE  309
            R++++++
Sbjct  396  RMRTQSN  402

130) PAGR_g1231 in NC_017554


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  188 bits (697),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 134/307 (44%), Positives = 218/307 (72%), Gaps = 1/307 (0%)

Query  3    GKVCVFGSFNLDIVAGMARFPLPGESLIAQHSMMGPGGKGANQATAALRAGARVHYIGKV  62
            GKVCV+GSFN+D+ A +++FP +GES++A +    PGGKGANQA AA  AGA  H+I KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GNDDFGIFARRHLEKTGFDAITLFTCKEKPTGNALIYVAGNDAENMISVYPGANLTVSAA  122
            G+D+F+ FA  H+ ++G+ + + +     PTG+ALIYV++ D++N+I++YPGAN+ +++ 
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EVTRCRPTVAAADILLVQLENNLSAIQRMIDHARAANTFVILNPAPFQKISDALLAKVDL  182
            E+   +  +A +D++L+QLE N+ A+   I  ++  N  ++LNPAP+ K    LL+ +D+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  LTPNSTEAMLLTGVKVTDLASARQAALVLHRKGARQVIITLGTAGALLSDGQQLLHIPVF  242
            +TPN TEA +L+GV +TD+  A++A+ ++ + G ++VIITLG+ G+L+ +  + L IP  
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PATPLDTTGAGDAFNgalaarlaagVSLEQaalfaaafaSLCVERQGAAHAMPAYADALA  302
            +A   D++GAGDAFNGALAA LA    +  A  +A+AFASL VE+ GA+ +MP   + L 
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGAS-SMPQHLQVLH  395

Query  303  RLQSHPE  309
            R++++++
Sbjct  396  RMRTQSN  402

131) rbsK3 in NC_016816


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  188 bits (696),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 134/307 (44%), Positives = 218/307 (72%), Gaps = 1/307 (0%)

Query  3    GKVCVFGSFNLDIVAGMARFPLPGESLIAQHSMMGPGGKGANQATAALRAGARVHYIGKV  62
            GKVCV+GSFN+D+ A +++FP +GES++A +    PGGKGANQA AA  AGA  H+I KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GNDDFGIFARRHLEKTGFDAITLFTCKEKPTGNALIYVAGNDAENMISVYPGANLTVSAA  122
            G+D+F+ FA  H+ ++G+ + + +     PTG+ALIYV++ D++N+I++YPGAN+ +++ 
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EVTRCRPTVAAADILLVQLENNLSAIQRMIDHARAANTFVILNPAPFQKISDALLAKVDL  182
            E+   +  +A +D++L+QLE N+ A+   I  ++  N  ++LNPAP+ K    LL+ +D+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  LTPNSTEAMLLTGVKVTDLASARQAALVLHRKGARQVIITLGTAGALLSDGQQLLHIPVF  242
            +TPN TEA +L+GV +TD+  A++A+ ++ + G ++VIITLG+ G+L+ +  + L IP  
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PATPLDTTGAGDAFNgalaarlaagVSLEQaalfaaafaSLCVERQGAAHAMPAYADALA  302
            +A   D++GAGDAFNGALAA LA    +  A  +A+AFASL VE+ GA+ +MP   + L 
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGAS-SMPQHLQVLH  395

Query  303  RLQAHPE  309
            R++++++
Sbjct  396  RMRTQSN  402

132) rbsK in NC_017531


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  186 bits (689),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/307 (44%), Positives = 218/307 (72%), Gaps = 1/307 (0%)

Query  3    GKVCVFGSFNLDIVAGMARFPLPGESLIAQHSMMGPGGKGANQATAALRAGARVHYIGKV  62
            GKVCV+GSFN+D+ A +++FP +GES++A +    PGGKGANQA AA  AGA  H+I KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GNDDFGIFARRHLEKTGFDAITLFTCKEKPTGNALIYVAGNDAENMISVYPGANLTVSAA  122
            G+D+F+ FA  H+ ++G+ + + +     PTG+ALIYV++ D++N+I++YPGAN+ +++ 
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EVTRCRPTVAAADILLVQLENNLSAIQRMIDHARAANTFVILNPAPFQKISDALLAKVDL  182
            E+   +  +A +D++L+QLE N+ A+   I  ++  N  ++LNPAP+ K    LL+ +D+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  LTPNSTEAMLLTDVKVTDLASARQAALVLHRKGARQVIITLGTAGALLSDGQQLLHIPVF  242
            +TPN TEA +L++V +TD+  A++A+ ++ + G ++VIITLG+ G+L+ +  + L IP  
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PATPLDTTGAGDAFNgalaarlaagVSLEQaalfaaafaSLCVERQGAAHAMPAYADALA  302
            +A   D++GAGDAFNGALAA LA    +  A  +A+AFASL VE+ GA+ +MP   + L 
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGAS-SMPQHLQVLH  395

Query  303  RLQAHPE  309
            R++++++
Sbjct  396  RMRTQSN  402

133) Pat9b_4200 in NC_014841


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  183 bits (680),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 213/303 (71%), Gaps = 1/303 (0%)

Query  3    GKVCVFGSFNLDIVTKMSRFPQPGESLVAHSSMMGPGGKGSNQATAALRAGARVHYIGKV  62
            GKVCV+GSFN+D+ + +++FPQ+GES++A      PGGKG+NQA AA  AGA  H+I KV
Sbjct  97   GKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKV  156

Query  63   GNDDFGLFARRHLEKTGFDAITLFTCKEKPTGNAMIYVAGDDAENMISVYPGANLMVTAA  122
            G+D+F+ FA  H+ ++G+ + + +     PTG+A+IYV++ D++N+I++YPGAN+M+T+ 
Sbjct  157  GKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  123  EVNRCQPTVAAADILLVQLENNLSAIQRMVDNARQAGTYVIVNPAPWQKVSDAFLRHVDL  182
            E+N  +  +A +D++L+QLE N+ A+   +  ++Q    +++NPAP  K    +L ++D+
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  183  LTPNSTEAGQLTNTNVTDLASAQVAAQILHGKGVRQLIITLGIQGALLSTGERMLLVPVF  242
            +TPN TEA+ L+   +TD+  A+ A++I+   GV+++IITLG +G+L+    R L +P  
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  243  PAQPVDSTGAGDSFNGALAARLAAGEPLEQAALFASAYASVCVERAGAANSMPRYDDAVK  302
            +A   D++GAGD+FNGALAA LA    +  A  +ASA+AS+ VE+ GA+ SMP+  + + 
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGAS-SMPQHLQVLH  395

Query  303  RMQ  305
            RM+
Sbjct  396  RMR  398

134) KPHS_26410 in NC_016845


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  161 bits (596),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 132/295 (45%), Positives = 205/295 (70%), Gaps = 0/295 (0%)

Query  1    MSGKVCVFGSFNFDMVARVDRFPVPGESLVACGSMTSAGGKGANQATAALKAGANVHYIG  60
             +GKVCV+GSFN+D+ A V +FP +GES++A      +GGKGANQA AA +AGA  H+I 
Sbjct  95   KAGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIF  154

Query  61   KIGNDTFGHFARRHLKGVGFNAVTLLVAEEIPTGNALIYVAGNDAENMIAVDPGANMTVT  120
            K+G+D F+ FA  H+   G+ + +   ++  PTG+ALIYV++ D++N+IA+ PGANM +T
Sbjct  155  KVGKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLT  214

Query  121  DDEIAGCIPAIGCADVVLVQLENNLSAIEQVIDAGKQAGALVILNPAPWQPVEHALLRKV  180
             +EI      I+ +DV+L+QLE N+ A+ + I  GKQ   +++LNPAP       LL  +
Sbjct  215  TQEINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDI  274

Query  181  DLLTPNATEAGLMTGRRVDSLTAAAEAADVLHAQGARNVIITLGASGALLSEHGVKSPIP  240
            D++TPN TEA++++G  +  +  A  A++++   G ++VIITLGA G+L+ EH+    IP
Sbjct  275  DIITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIP  334

Query  241  CFPSHPRDTTGAGDAFNGALAARLACGEPLQaaarfaaayaaVSVEKQGASSLPE  295
              ++  +D++GAGDAFNGALAA LA    + AA ++A+A+A+++VE+ GASS+P+
Sbjct  335  AWSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQ  389

135) N559_2605 in NC_022082


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  161 bits (596),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 132/296 (45%), Positives = 205/296 (70%), Gaps = 0/296 (0%)

Query  1    MMSGKVCVFGSFNFDMVARVDRFPVPGESLVACGSMTSAGGKGANQATAALKAGANVHYI  60
              +GKVCV+GSFN+D+ A V +FP +GES++A      +GGKGANQA AA +AGA  H+I
Sbjct  94   KKAGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFI  153

Query  61   GKIGNDTFGHFARRHLKGVGFNAVTLLVAEEIPTGNALIYVAGNDAENMIAVDPGANMTV  120
             K+G+D F+ FA  H+   G+ + +   ++  PTG+ALIYV++ D++N+IA+ PGANM +
Sbjct  154  FKVGKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMML  213

Query  121  TDDEIAGCIPAIGCADVVLVQLENNLSAIEQVIDAGKQAGALVILNPAPWQPVEHALLRK  180
            T +EI      I+ +DV+L+QLE N+ A+ + I  GKQ   +++LNPAP       LL  
Sbjct  214  TTQEINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSD  273

Query  181  VDLLTPNATEAGLMTGRRVDSLTAAAEAADVLHAQGARNVIITLGASGALLSEHGVKSPI  240
            +D++TPN TEA++++G  +  +  A  A++++   G ++VIITLGA G+L+ EH+    I
Sbjct  274  IDIITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYI  333

Query  241  PCFPSHPRDTTGAGDAFNGALAARLACGEPLQaaarfaaayaaVSVEKQGASSLPE  296
            P  ++  +D++GAGDAFNGALAA LA    + AA ++A+A+A+++VE+ GASS+P+
Sbjct  334  PAWSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQ  389

136) KOX_01985 in NC_016612


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  146 bits (539),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 130/308 (43%), Positives = 212/308 (69%), Gaps = 1/308 (0%)

Query  2    SGKVCVFGSFNFDMVARVERFPVPGESLVACGSMTSAGGKGANQATAALKAGANVHYIGK  61
            +GKVCV+GSFN+D+ A V +FP +GES++A      +GGKGANQA AA +AGA  H+I K
Sbjct  96   AGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFK  155

Query  62   IGNDTFGHFARRHLKGVGFNAVTLLVAEEVPTGNALIYVAGNDAENMIAVDPGANMTVTD  121
            +G+D F+ FA  H+   G+ + +   ++  PTG+ALIYV++ D++N+IA+ PGANM +T 
Sbjct  156  VGKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTT  215

Query  122  DEIAGCIPAIGCADVVLVQLENNLSAIEQVVDAAKAAGAFVVLNPAPWQPVEHAFLSKVD  181
            +EI      I+ +DV+L+QLE N+ A+ + +  +K     ++LNPAP       +LS +D
Sbjct  216  QEINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDID  275

Query  182  LLTPNATEAGLMTGRRVDSLaaaaeaadalhaqgaRNVIITLGAKGALLSEQGVKSPIPC  241
            ++TPN TEA++++G  +  +  A  A++ +   G ++VIITLGA+G+L+ E++    IP 
Sbjct  276  IITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPA  335

Query  242  FPSHPRDTTGAGDAFNGALAARLACGEPLHSaarfaaayaaVSVEKQGASSLPDYQEARE  301
             ++  +D++GAGDAFNGALAA LA    + +A ++A+A+A+++VE+ GASS+P+  +  +
Sbjct  336  WSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLH  395

Query  302  RLLRAASD  309
            R +R+ S+
Sbjct  396  R-MRTQSN  402

137) A225_4868 in NC_018106


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  146 bits (538),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 129/308 (42%), Positives = 212/308 (69%), Gaps = 1/308 (0%)

Query  2    SGKVCVFGSFNFDMVARVERFPVPGESLVACGSMTSAGGKGANQATAALKAGANVHYIGK  61
            +GKVCV+GSFN+D+ A V +FP +GES++A      +GGKGANQA AA +AGA  H+I K
Sbjct  96   AGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFK  155

Query  62   IGNDTFGHFARRHLKGVGFNAVTLLVAEDVPTGNALIYVAGNDAENMIAVDPGANMTVTD  121
            +G+D F+ FA  H+   G+ + +   ++  PTG+ALIYV++ D++N+IA+ PGANM +T 
Sbjct  156  VGKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTT  215

Query  122  DEIAGCIPAIGCADVVLVQLENNLSAIEQVVDAAKAAGAFVVLNPAPWQPVEHAFLSKVD  181
            +EI      I+ +DV+L+QLE N+ A+ + +  +K     ++LNPAP       +LS +D
Sbjct  216  QEINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDID  275

Query  182  LLTPNATEAGLMTGRRVDSLaaaaeaadalhaqgaRNVIITLGAKGALLSEQGVKSPVPC  241
            ++TPN TEA++++G  +  +  A  A++ +   G ++VIITLGA+G+L+ E++    +P 
Sbjct  276  IITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPA  335

Query  242  FPSHPRDTTGAGDAFNGALAARLACGEPLHSaarfaaayaaVSVEKQGASSLPDYQEARE  301
             ++  +D++GAGDAFNGALAA LA    + +A ++A+A+A+++VE+ GASS+P+  +  +
Sbjct  336  WSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLH  395

Query  302  RLLRAASD  309
            R +R+ S+
Sbjct  396  R-MRTQSN  402

138) A79E_2522 in NC_018522


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  140 bits (515),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 130/294 (45%), Positives = 205/294 (70%), Gaps = 0/294 (0%)

Query  2    SGKVCVFGSFNFDMVARVDRFPVPGESLVACGSMTSAGGKGANQATAALKAGANVHYIGK  61
            +GKVCV+GSFN+D+ A V +FP +GES++A      +GGKGANQA AA +AGA  H+I K
Sbjct  96   AGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFK  155

Query  62   IGNDTFGHFARRHLKGVGFNAVTLLVAEEIPTGNALIYVAGNDAENMIAVDPGANMTVTD  121
            +G+D F+ FA  H+   G+ + +   ++  PTG+ALIYV++ D++N+IA+ PGANM +T 
Sbjct  156  VGKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTT  215

Query  122  DEIAGCIPAIGCADVVLVQLENNLSAIEQVIDAGKQAGALVILNPAPWQPVEHAVLSKVD  181
            +EI      I+ +DV+L+QLE N+ A+ + I  GKQ   +++LNPAP       +LS +D
Sbjct  216  QEINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDID  275

Query  182  LLTPNATEAGLMTGRRVDSLTAAAEAADVLHAQGARNVIITlgasgallselgVKSRVPC  241
            ++TPN TEA++++G  +  +  A  A++++   G ++VIITLGA G+L+ E +    +P 
Sbjct  276  IITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPA  335

Query  242  FPSHPRDTTGAGDAFNGALAARLACGEPLQaaarfaaayaaVSVEKQGASSLPE  295
             ++  +D++GAGDAFNGALAA LA    + AA ++A+A+A+++VE+ GASS+P+
Sbjct  336  WSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQ  389

139) KP1_2751 in NC_012731


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  140 bits (516),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 130/294 (45%), Positives = 205/294 (70%), Gaps = 0/294 (0%)

Query  3    SGKVCVFGSFNFDMVARVDRFPVPGESLVACGSMTSAGGKGANQATAALKAGANVHYIGK  62
            +GKVCV+GSFN+D+ A V +FP +GES++A      +GGKGANQA AA +AGA  H+I K
Sbjct  96   AGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFK  155

Query  63   IGNDTFGHFARRHLKGVGFNAVTLLVAEEIPTGNALIYVAGNDAENMIAVDPGANMTVTD  122
            +G+D F+ FA  H+   G+ + +   ++  PTG+ALIYV++ D++N+IA+ PGANM +T 
Sbjct  156  VGKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTT  215

Query  123  DEIAGCIPAIGCADVVLVQLENNLSAIEQVIDAGKQAGALVILNPAPWQPVEHAVLSKVD  182
            +EI      I+ +DV+L+QLE N+ A+ + I  GKQ   +++LNPAP       +LS +D
Sbjct  216  QEINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDID  275

Query  183  LLTPNATEAGLMTGRRVDSLTAAAEAADVLHAQGARNVIITlgasgallselgVKSRVPC  242
            ++TPN TEA++++G  +  +  A  A++++   G ++VIITLGA G+L+ E +    +P 
Sbjct  276  IITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPA  335

Query  243  FPSHPRDTTGAGDAFNGALAARLACGEPLQaaarfaaayaaVSVEKQGASSLPE  296
             ++  +D++GAGDAFNGALAA LA    + AA ++A+A+A+++VE+ GASS+P+
Sbjct  336  WSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQ  389

140) KPR_2603 in NC_021232


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 190/299 (64%), Gaps = 28/299 (9%)

Query  1    MMSGKVCVFGSFNFDMVARVDRFPVPGESLVACGSMTSAGGKGANQATAALKAGANVHYI  60
              +GKVCV+GSFN+D+ A V +FP +GES++A      +GGKGANQA AA +AGA  H+I
Sbjct  94   KKAGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFI  153

Query  61   GKIGNDTFGHFARRHLKGVGFNAVTLLVAEEIPTGNALIYVAA-----------------  103
             K+G+D F+ FA  H+   G+ + +   ++  PTG+ALIYV+A                 
Sbjct  154  FKVGKDQFSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMML  213

Query  104  -----------IGCADVVLVQLENNLSAIEQVIDAGKQAGALVILNPAPWQPVEHAVLSK  152
                       I+ +DV+L+QLE N+ A+ + I  GKQ   +++LNPAP       +LS 
Sbjct  214  TTQEINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSD  273

Query  153  VDLLTPNATEAGLMTGRWVDSLTAAAEAADVLHAQDARNVIITLGASGALLSEHGVKSPI  212
            +D++TPN TEA++++G  +  +  A  A++++   + ++VIITLGA G+L+ EH+    I
Sbjct  274  IDIITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYI  333

Query  213  PCFPSHPRDTTGAGDAFNGALAARLACGEPLQaaarfaaayaaVSVEKQGASSLPEYLE  271
            P  ++  +D++GAGDAFNGALAA LA    + AA ++A+A+A+++VE+ GASS+P+ L+
Sbjct  334  PAWSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQ  392

141) UMN179_01523 in NC_015460


> NC_003197_P2|4|G4|16764732|NP_460347.1|Salmonella_typhimurium_LT2|-|3067..4293|orf408|STM1382|regulatory 
protein
Length=408

 Score =  125 bits (457),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 122/300 (41%), Positives = 196/300 (66%), Gaps = 4/300 (1%)

Query  3    KLTVLGSINADHVIQVPHFPQPGETLSGQNYHIVYGGKGANQAVAAARLGAKVDFIACIG  62
            K+ VLGS+N D    VP FPQ+GE++ + ++ +  GGKGANQA+AA   GA  +FI  +G
Sbjct  98   KVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVG  157

Query  63   EDKIG-LEMKQAFQKDGINTESIATIQGETTGIAMIQVTD-SGENSIVISAGANAHLTTD  120
             D+++ + M++ +Q  GI + S    +   TG A+I V+   G+N I I +GAN  LTT+
Sbjct  158  KDQFSAFAMNHIIQ-SGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQ  216

Query  121  IVDKFKQKILDADALLMQLETPLDAIIYATKIAKQAGKHTVLNPAPAKALPDELLAQLTM  180
             ++   + I ++D +LMQLET ++A+    +++KQ  K  +LNPAP      +LL+++ +
Sbjct  217  EINEQHRYIAESDVMLMQLETNIEALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDI  276

Query  181  ITPNETEAELLTGVKVVDEQSAAQAAAVFHQKGVAIVLITLGAKGVFISHNALQKIIPGF  240
            ITPNETEA +L+GV + D + A +A+ ++ Q GV  V+ITLGA+G +I ++A    IP+ 
Sbjct  277  ITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGARGSLICEHARTLYIPAW  336

Query  241  RVQAKDTTAAGDTFNGALVTALLEQKSLEEAIQFahaaaaISVTRFGAQTSIPSRQETLD  300
                KD+++AGD+FNGAL +AL  Q  +  AIQ+A A A+++V + GA +S+P + + L+
Sbjct  337  SAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGA-SSMPQHLQVLH  395