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Homologs of unnamed gene of AY597275

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PSEBR_a3039
( YP_004354349.1 )

LysR family transcriptional regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

5e-129

2) YSA_04981
( YP_006386579.1 )

LysR family transcriptional regulator

NC_017986
(Pseudomonas putida ND6)

5e-125

3) Pput_5279
( YP_001270581.1 )

LysR family transcriptional regulator

NC_009512
(Pseudomonas putida F1)

8e-125

4) PputUW4_02107
( YP_007029115.1 )

LysR family transcriptional regulator

NC_019670
(Pseudomonas sp. UW4)

5e-122

5) PSPPH_1259
( YP_273521.1 )

transcriptional regulator

NC_005773
(Pseudomonas syringae 1448A)

1e-121

6) Pfl01_2722
( YP_348453.1 )

LysR family transcriptional regulator

NC_007492
(Pseudomonas fluorescens Pf0-1)

2e-121

7) PPUBIRD1_0041
( YP_005927956.1 )

LysR family transcriptional regulator

NC_017530
(Pseudomonas putida BIRD-1)

3e-112

8) B479_17285
( YP_007230292.1 )

LysR family transcriptional regulator

NC_019905
(Pseudomonas putida PC9)

2e-103

9) PPS_3477
( YP_004702904.1 )

LysR family transcriptional regulator

NC_015733
(Pseudomonas putida S16)

2e-103

10) Psefu_3761
( YP_004475812.1 )

LysR family transcriptional regulator

NC_015556
(Pseudomonas fulva 12-X)

5e-101

11) AB57_1043
( YP_002318433.1 )

transcriptional regulatory protein

NC_011586
(Acinetobacter baumannii AB0057)

2e-94

12) ABBFA_002644
( YP_002326542.1 )

HTH-type transcriptional regulator perR (Peroxide resistance proteinperR)

NC_011595
(Acinetobacter baumannii AB307-0294)

2e-94

13) ABAYE2827
( YP_001714630.1 )

LysR family transcriptional regulator

NC_010410
(Acinetobacter baumannii AYE)

2e-94

14) ABD1_09200
( YP_007595471.1 )

transcriptional regulator, LysR family

NC_020547
(Acinetobacter baumannii D1279779)

2e-94

15) ACICU_00928
( YP_001845587.1 )

transcriptional regulator

NC_010611
(Acinetobacter baumannii ACICU)

3e-94

16) BJAB07104_01063
( YP_008208526.1 )

Transcriptional regulator

NC_021726
(Acinetobacter baumannii BJAB07104)

3e-94

17) BJAB0868_01077
( YP_008212402.1 )

Transcriptional regulator

NC_021729
(Acinetobacter baumannii BJAB0868)

3e-94

18) ABTJ_02844
( YP_006290730.1 )

transcriptional regulator

NC_017847
(Acinetobacter baumannii MDR-TJ)

3e-94

19) ABZJ_01069
( YP_005525025.1 )

transcriptional regulator

NC_017171
(Acinetobacter baumannii MDR-ZJ06)

3e-94

20) M3Q_1265
( YP_006847588.1 )

transcriptional regulator

NC_018706
(Acinetobacter baumannii TYTH-1)

3e-94

21) AOLE_14510
( YP_003733162.1 )

HTH-type transcriptional regulator perR (Peroxide resistance proteinperR)

NC_014259
(Acinetobacter oleivorans DR1)

4e-94

22) ABK1_0952
( YP_005513524.1 )

transcriptional regulatory protein

NC_017162
(Acinetobacter baumannii 1656-2)

4e-93

23) ABTW07_1057
( YP_005797953.1 )

transcriptional regulator

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

4e-93

24) gcvA
( YP_004994513.1 )

transcriptional regulator

NC_016603
(Acinetobacter calcoaceticus PHEA-2)

1e-89

25) A1S_0966
( YP_001084000.1 )

transcriptional regulator

NC_009085
(Acinetobacter baumannii ATCC 17978)

2e-78

26) ampR7
( YP_003730265.1 )

HTH-type transcriptional activator AmpR

NC_014258
(Pantoea vagans C9-1)

3e-77

27) lysR
( YP_005043775.1 )

LysR family transcriptional regulator

NC_016626
(Burkholderia sp. YI23)

5e-74

28) BRPE64_DCDS04580
( YP_008040368.1 )

transcriptional regulator LysR family

NC_021289
(Burkholderia sp. RPE64)

7e-74

29) D781_2335
( YP_007344787.1 )

transcriptional regulator

NC_020064
(Serratia marcescens FGI94)

2e-73

30) CNE_BB1p07940
( YP_004688247.1 )

LysR family transcriptional regulator

NC_015727
(Cupriavidus necator N-1)

7e-73

31) NH8B_2714
( YP_004847926.1 )

LysR family transcriptional regulator

NC_016002
(Pseudogulbenkiania sp. NH8B)

1e-71

32) PCC21_021940
( YP_006646850.1 )

LysR family transcriptional regulator

NC_018525
(Pectobacterium carotovorum PCC21)

2e-70

33) Bphy_5874
( YP_001861984.1 )

LysR family transcriptional regulator

NC_010625
(Burkholderia phymatum STM815)

1e-69

34) perR
( YP_004953320.1 )

HTH-type transcriptional regulator perR

NC_016514
(Enterobacter cloacae EcWSU1)

1e-69

35) Dda3937_00377
( YP_003882483.1 )

transcriptional regulator

NC_014500
(Dickeya dadantii 3937)

8e-70

36) ECL_03996
( YP_003614479.1 )

LysR family transcriptional regulator

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-67

37) A3UG_17525
( YP_006478927.1 )

LysR family transcriptional regulator

NC_018079
(Enterobacter cloacae SDM)

4e-67

38) ROD_07971
( YP_003364421.1 )

LysR family transcriptional regulator

NC_013716
(Citrobacter rodentium ICC168)

2e-66

39) KPR_3763
( YP_007992738.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

3e-66

40) KPN2242_06935
( YP_005953870.1 )

putative LysR family regulatory protein

NC_017540
(Klebsiella pneumoniae KCTC 2242)

5e-66

41) A79E_3417
( YP_006637209.1 )

LysR family transcriptional regulator

NC_018522
(Klebsiella pneumoniae 1084)

7e-66

42) KP1_1779
( YP_002918581.1 )

LysR family transcriptional regulator

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

7e-66

43) KPN_00825
( YP_001334491.1 )

transcriptional regulator LysR

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

7e-66

44) Kvar_3556
( YP_003440468.1 )

LysR family transcriptional regulator

NC_013850
(Klebsiella variicola At-22)

1e-65

45) KPK_3746
( YP_002239565.1 )

LysR family transcriptional regulator

NC_011283
(Klebsiella pneumoniae 342)

2e-65

46) KPHS_16530
( YP_005225953.1 )

transcriptional regulator LysR

NC_016845
(Klebsiella pneumoniae HS11286)

3e-65

47) N559_3511
( YP_008426439.1 )

transcriptional regulator LysR

NC_022082
(Klebsiella pneumoniae JM45)

3e-65

48) CFSAN002050_10650
( YP_008260049.1 )

LysR family transcriptional regulator

NC_021818
(Salmonella enterica CFSAN002050)

1e-63

49) SPAB_02694
( YP_001588906.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-63

50) KOX_15045
( YP_005018972.1 )

putative LysR family regulatory protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

3e-63

51) A225_1836
( YP_006497566.1 )

transcriptional regulator

NC_018106
(Klebsiella oxytoca E718)

4e-63

52) Bpro_1453
( YP_548299.1 )

LysR family transcriptional regulator

NC_007948
(Polaromonas sp. JS666)

4e-48

53) Alide_2374
( YP_004126996.1 )

LysR family transcriptional regulator

NC_014910
(Alicycliphilus denitrificans BC)

2e-47

54) Alide2_2568
( YP_004388441.1 )

LysR family transcriptional regulator

NC_015422
(Alicycliphilus denitrificans K601)

2e-47

55) Hsero_0510
( YP_003773937.1 )

LysR family transcription regulator protein

NC_014323
(Herbaspirillum seropedicae SmR1)

2e-46

56) AZKH_p0607
( YP_007598547.1 )

transcriptional regulator, LysR family

NC_020548
(Azoarcus sp. KH32C)

8e-34

• Sequence Alignments

1) PSEBR_a3039 in NC_015379


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  453 bits (1706),  Expect = 5e-129, Method: Compositional matrix adjust.
 Identities = 267/305 (88%), Positives = 291/305 (96%), Gaps = 0/305 (0%)

Query  1    MRQDDIPSSKLPPLRAIQAFEQTARFGNLARAAEVLDLTPSAISHQLAKLEVMIGRQLFV  60
            MR DD P S+LPPL+AIQAFEQTARFGNLARAAEVLDLTPSA+SHQLAKLE MIGRQLFV
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RAARGVTLTPVGEQYLKDISGLLQSLEVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120
            RAARGVTLTPVGEQYLK++SGLL+SL VATERAASDVSLDCLRLHSSPSFGLLWLMPRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFRLTNPDIQINLSCSYESLHFSQDKIDVDIRHGRPNWPSYEVRTVRNESFAVLASPKLI  180
            +FR+++PDIQINLSCSYESLHFS+DKIDVDIRHGRPNWPSYEVRTVR+E+FAVLASPKL+
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ARCAVKSAVDLLVEDLILSEATLLRWPEWFAQHGLARPEKPYALSFDRSYMSLEAASHGL  240
             R +V+SA DLL  +LILSEATLL+WPE FAQHGLARPEKPY+LSFDRSYM+LEAASHGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFALESTLLAQKYLASGSLVEVAPEALSSPVAAHHLVFPKAHSSFPRVRRFLGWMEGELG  300
            GFALESTLLAQKYL SG+L+EVAP+ LSSPVAAHHLVFPKAHSSFPRVRRFL WME+ELG
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

Query  301  HGFVF  305
            HGFVF
Sbjct  301  HGFVF  305

2) YSA_04981 in NC_017986


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  440 bits (1656),  Expect = 5e-125, Method: Compositional matrix adjust.
 Identities = 258/305 (85%), Positives = 285/305 (94%), Gaps = 0/305 (0%)

Query  16   MRSVDDTAPALPPLRAIQAFEQTARFGNVARAAEVLDLTPSAVSHQLAKLEAMIGRQLFF  75
            MR+ DD  + LPPL+AIQAFEQTARFGN+ARAAEVLDLTPSAVSHQLAKLEAMIGRQLF 
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  76   RAARGVSLTPVGEQYLKDVSGILHSLSVATERASSDVSLDCLRLHSSPSFGLLWLMPRLE  135
            RAARGV+LTPVGEQYLK+VSG+LHSL+VATERA+SDVSLDCLRLHSSPSFGLLWLMPRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  136  AFRMAHPDIQINLSCSYESLHFSRDKIDVDIRHGEPNWPSYEVRTLGNEAFAVLASPKLL  195
            AFR++HPDIQINLSCSYESLHFSRDKIDVDIRHG PNWPSYEVRT+ +E+FAVLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  196  ARHRIDDASDLLRRDLILSEATLLKWPAWFARHGLARPEKPYALSFDRSYMSLEAASHGL  255
             R  ++ A+DLL  +LILSEATLLKWP  FA+HGLARPEKPY+LSFDRSYM+LEAASHGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  256  GFALESTLLAQKYLASGTLVEVVPHIFSAPVAAHHLVFPKAHSGFERVRRFLAWMERELG  315
            GFALESTLLAQKYL SG+L+EV PH++S+PVAAHHLVFPKAHS+F RVRRFL WME ELG
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

Query  316  HGFVF  320
            HGFVF
Sbjct  301  HGFVF  305

3) Pput_5279 in NC_009512


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  439 bits (1653),  Expect = 8e-125, Method: Compositional matrix adjust.
 Identities = 257/305 (85%), Positives = 285/305 (94%), Gaps = 0/305 (0%)

Query  1    MRSVDDTAPALPPLRAIQAFEQTARFGNVARAAEVLDLTPSAVSHQLAKLEAMIGRQLFF  60
            MR+ DD  + LPPL+AIQAFEQTARFGN+ARAAEVLDLTPSAVSHQLAKLEAMIGRQLF 
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RAARGVSLTPVGEQYLKDVSGILHSLSVATERASSDVSLDCLRLHSSPSFGLLWLMPRLE  120
            RAARGV+LTPVGEQYLK+VSG+LHSL+VATERA+SDVSLDCLRLHSSPSFGLLWLMPRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  AFRMAHPDIQINLSCSYESLHFSRDKIDVDIRHGEPNWPSYEVRTLGNEAFAVLASPKLL  180
            AFR++HPDIQINLSCSYESLHFSRDKIDVDIRHG PNWPSYEVRT+ +E+FAVLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ARHRIDDASDLLRRDLILSEATLLKWPAWFARHGLARPEKPYALSFDRSYMSLEAASHGL  240
             R  ++ A+DLL  +LILSEATLLKWP  FA+HGLARPEKPY+LSFDRSYM+LEAASHGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFALESTLLAQKYLAAGTLVEVVPHIFSAPVAAHHLVFPKAHSGFERVRRFLAWMERELG  300
            GFALESTLLAQKYL +G+L+EV PH++S+PVAAHHLVFPKAHS+F RVRRFL WME ELG
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

Query  301  HGFVF  305
            HGFVF
Sbjct  301  HGFVF  305

4) PputUW4_02107 in NC_019670


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  429 bits (1617),  Expect = 5e-122, Method: Compositional matrix adjust.
 Identities = 251/305 (83%), Positives = 287/305 (95%), Gaps = 1/305 (0%)

Query  1    MSSPGDAPPILPPLKAIQAFEQTARFGNIARAAELLDLTPSAVSHQLAKLEAMIGRQLFL  60
            M + +D+ + LPPLKAIQAFEQTARFGN+ARAAE+LDLTPSAVSHQLAKLEAMIGRQLF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RTARGVTLTPVGEQYLTEVSGILHSLAVATERATSDVSLDCLRLHSSPSFGLLWLMPRLE  120
            R+ARGVTLTPVGEQYL EVSG+LHSLAVATERA+SDVSLDCLRLHSSPSFGLLWLMPRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  QFRQSHPDIQLNLSCSYESLHFSRDKIDVDIRHGMPNWPSYEVRTIRNEKIAVLASPKLL  180
             FR SHPDIQ+NLSCSYESLHFSRDKIDVDIRHG PNWPSYEVRT+R+E +AVLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  EKRPIRAVADLLDCNLILSEATLIKWPQLFAQHGLSRPERPYTLSFDRSYMTLEAASHGL  240
            E+ P+ + ADLL+ +LILSEATL+KWP+LFAQHGL+RPE+PYTLSFDRSYMTLEAASHGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFALESTLLAQDYLARGALVEVAPE-LSAPITAHHLVFPRAHANFPRVRRFLEWMQNELG  299
            GFALESTLLAQ YL  GAL+EVAP+ LS+P++AHHLVFP+AH++FPRVRRFLEWM++ELG
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

Query  300  HDLNY  304
            H++ +
Sbjct  301  HGFVF  305

5) PSPPH_1259 in NC_005773


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  428 bits (1612),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 256/286 (90%), Positives = 276/286 (97%), Gaps = 0/286 (0%)

Query  20   FEQTARFGNLARAAEVLDLTPSAVSHQLARLEALIGRQLFVRAARGVTLTPVGEQYLKDV  79
            FEQTARFGNLARAAEVLDLTPSAVSHQLA+LEA+IGRQLFVRAARGVTLTPVGEQYLK+V
Sbjct  20   FEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTPVGEQYLKEV  79

Query  80   SGVLHSLAVATERAASDVSLDCLRLHSAPSFGLLWLMPRLEAFRVSHPDIQINLSCSYES  139
            SG+LHSLAVATERAASDVSLDCLRLHS+PSFGLLWLMPRLEAFR+SHPDIQINLSCSYES
Sbjct  80   SGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQINLSCSYES  139

Query  140  LHFSRDKIDVDIRHGRPNWPSYEVRTLRDEKFAVLASPQLLARRPVHSAADLLERELILS  199
            LHFSRDKIDVDIRHGRPNWPSYEVRT+R+E FAVLASP+LL R PV+SAADLL+ ELILS
Sbjct  140  LHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAADLLNGELILS  199

Query  200  EATLLKWPEWFARHGLARPEKPYALSFDRSYMTLEAASHGLGFALESTLLAQKYLGTGEL  259
            EATLLKWPE FA+HGLARPEKPY+LSFDRSYMTLEAASHGLGFALESTLLAQKYL +G L
Sbjct  200  EATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLAQKYLQSGAL  259

Query  260  IEVAPQELTAPVAAHHLVFPKAHSGFPRVRRFLEWMEHELGQGFEF  305
            +EVAP+ L++PVAAHHLVFPKAHS+FPRVRRFLEWME ELG+GF F
Sbjct  260  LEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGHGFVF  305

6) Pfl01_2722 in NC_007492


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  428 bits (1610),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 249/305 (82%), Positives = 282/305 (93%), Gaps = 1/305 (0%)

Query  1    MSSSGEAPPILPPLKAIQAFEQTARFGNVARAAEVLDLTPSAVSHQLAKLEAMIGRQLFL  60
            M + +++ + LPPLKAIQAFEQTARFGN+ARAAEVLDLTPSAVSHQLAKLEAMIGRQLF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RTARGVTLTPVGEQYLSEISGILHSLAVATERATSDVSLDCLRLHSSPSFGLLWLMPRLE  120
            R+ARGVTLTPVGEQYL E+SG+LHSLAVATERA+SDVSLDCLRLHSSPSFGLLWLMPRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  QFRESHPDIQLNLSCSYESLHFSRDKIDVDIRHGMPNWPSFEVRTLRNEKIAVLASPKLL  180
             FR SHPDIQ+NLSCSYESLHFSRDKIDVDIRHG PNWPS+EVRT+R+E +AVLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  EKRPIRAVADLLDCNLILSEATLIKWPQLFAQHGLSRPESPYTLSFDRSYMTLEAASHGL  240
            E+ P+ + ADLL+ +LILSEATL+KWP+LFAQHGL+RPE PYTLSFDRSYMTLEAASHGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFALESTLLAQDYLARGELVEVIPG-LSAPITAHHLVFPKAHAGFPRVRRFLEWMQRELG  299
            GFALESTLLAQ YL  G L+EV P  LS+P++AHHLVFPKAH++FPRVRRFLEWM+ ELG
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

Query  300  HDFSY  304
            H+F +
Sbjct  301  HGFVF  305

7) PPUBIRD1_0041 in NC_017530


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  397 bits (1492),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 231/271 (86%), Positives = 255/271 (95%), Gaps = 0/271 (0%)

Query  1    MLDLTPSAVSHQLAKLEAMIGRQLFFRAARGVSLTPVGEQYLKDVSGILHSLSVATERAS  60
            +LDLTPSAVSHQLAKLEAMIGRQLF RAARGV+LTPVGEQYLK+VSG+LHSL+VATERA+
Sbjct  35   VLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTPVGEQYLKEVSGLLHSLAVATERAA  94

Query  61   SDVSLDCLRLHSSPSFGLLWLMPRLEAFRMAHPDIQINLSCSYESLHFSRDKIDVDIRHG  120
            SDVSLDCLRLHSSPSFGLLWLMPRLEAFR++HPDIQINLSCSYESLHFSRDKIDVDIRHG
Sbjct  95   SDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQINLSCSYESLHFSRDKIDVDIRHG  154

Query  121  EPNWPSYEVRTLGNEAFAVLASPKLLARHRIDDASDLLRRDLILSEATLLKWPAWFARHG  180
             PNWPSYEVRT+ +E+FAVLASPKLL R  ++ A+DLL  +LILSEATLLKWP  FA+HG
Sbjct  155  RPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAADLLNGELILSEATLLKWPELFAQHG  214

Query  181  LARPEKPYALSFDRSYMSLEAASHGLGFALESTLLAQKYLASGTLVEVVPHIFSAPVAAH  240
            LARPEKPY+LSFDRSYM+LEAASHGLGFALESTLLAQKYL SG+L+EV PH++S+PVAAH
Sbjct  215  LARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLAQKYLQSGALLEVAPHLLSSPVAAH  274

Query  241  HLVFPKAHSGFERVRRFLAWMERELGHGFVF  271
            HLVFPKAHS+F RVRRFL WME ELGHGFVF
Sbjct  275  HLVFPKAHSSFPRVRRFLEWMESELGHGFVF  305

8) B479_17285 in NC_019905


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  368 bits (1382),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 204/297 (69%), Positives = 266/297 (90%), Gaps = 0/297 (0%)

Query  10   PQIPSLKAIQAFEQVARFANVARAAEQLNLTPSAVSHQIANLEALIGRPLFIREARGVAL  69
            +++P+LKAIQAFEQ ARF+N+ARAAE L+LTPSAVSHQ+A+LEA+IGR LF+R ARGV+L
Sbjct  9    SNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTL  68

Query  70   TPAGEQYLREVSGILQSLATATERAGNSVGFDCLRLHSAPSFGLLWLLPRLDHFRNSHPQ  129
            TP GEQYL+EVSG+L+SLA ATERA++ V++DCLRLHS+PSFGLLWL+PRL+ FR SHP+
Sbjct  69   TPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPD  128

Query  130  IQINLSCSYESLHFGRHQIDLDIRHGYPNWPSLEVRTIRHERATVLASPQLLERTPIKQP  189
            IQINLSCSYESLHF+R++ID+DIRHG PNWPS EVRT+RHE  +VLASP+LLER+P++ +
Sbjct  129  IQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSA  188

Query  190  GDLLGQNLILSEAALVQWPQWFAQQGVALPQTPYALSFDRSYMSLEAASHGYGVALESSL  249
            +DLL  +LILSEA+L++WP+ FAQ+G+A P+ PY+LSFDRSYM+LEAASHG G ALES+L
Sbjct  189  ADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTL  248

Query  250  LAQDYIARGELVPVFAEDLATPVSAHHLVFPRGHAETPRVRQFLEWMQGQLGHDFNY  306
            LAQ Y+  G L+ V ++ L++PV+AHHLVFP++H+  PRVR+FLEWM+++LGH+F +
Sbjct  249  LAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGHGFVF  305

9) PPS_3477 in NC_015733


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  368 bits (1384),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 204/297 (69%), Positives = 266/297 (90%), Gaps = 0/297 (0%)

Query  31   PQIPSLKAIQAFEQVARFANVARAAEQLNLTPSAVSHQLANLEALIGRPLFIREARGVAL  90
            +++P+LKAIQAFEQ ARF+N+ARAAE L+LTPSAVSHQLA+LEA+IGR LF+R ARGV+L
Sbjct  9    SNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTL  68

Query  91   TPAGEQYLREVSGILQSLATATERAGNSVGFDCLRLHSAPSFGLLWLLPRLDHFRNSHPQ  150
            TP GEQYL+EVSG+L+SLA ATERA++ V++DCLRLHS+PSFGLLWL+PRL+ FR SHP+
Sbjct  69   TPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPD  128

Query  151  IQINLSCSYESLHFGRHQIDLDIRHGYPNWPSLEVRTIRHERATVLASPQLLERTPIKQP  210
            IQINLSCSYESLHF+R++ID+DIRHG PNWPS EVRT+RHE  +VLASP+LLER+P++ +
Sbjct  129  IQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSA  188

Query  211  GDLLGQNLILSEAALVQWPQWFAQQGVTLPQTPYALSFDRSYMSLEAASHGYGVALESSL  270
            +DLL  +LILSEA+L++WP+ FAQ+G++ P+ PY+LSFDRSYM+LEAASHG G ALES+L
Sbjct  189  ADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTL  248

Query  271  LAQDYIARGELVPVFAEDLATPVSAHHLVFPRGHAETPRVRQFLEWMQGQLGHDFNY  327
            LAQ Y+  G L+ V ++ L++PV+AHHLVFP++H+  PRVR+FLEWM+++LGH+F +
Sbjct  249  LAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGHGFVF  305

10) Psefu_3761 in NC_015556


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  360 bits (1352),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 200/297 (68%), Positives = 264/297 (89%), Gaps = 0/297 (0%)

Query  10   TSLPPLKAIQSFEQVARFGNVARAAEQLNLTPSAVSHQIANLEALIGRPLFLRNARGVTL  69
            ++LPPLKAIQ+FEQ ARFGN+ARAAE L+LTPSAVSHQ+A+LEA+IGR LF+R ARGVTL
Sbjct  9    SNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTL  68

Query  70   TPAGEQYLRDVTGVLQNLALATQRAGNDISADSLRLHSAPSFGLLWLLPRLERFRESHPD  129
            TP GEQYL++V+G+L++LA+AT+RA++D+S D LRLHS+PSFGLLWL+PRLE FR SHPD
Sbjct  69   TPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPD  128

Query  130  IQINLSCSYESLHFGRSQIDLDIRHGYPNWPSLEVRTIRHEHLAVLASPALLARHPISEP  189
            IQINLSCSYESLHF+R +ID+DIRHG PNWPS EVRT+RHE +AVLASP LL R P++ +
Sbjct  129  IQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSA  188

Query  190  QDLLSQDLILSEAALVQWPQWFAHQGVSLPEAPFALSFDRSYMSLEAASHGFGFALESSL  249
             DLL+ +LILSEA+L++WP+ FA++G++ PE P++LSFDRSYM+LEAASHG+GFALES+L
Sbjct  189  ADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTL  248

Query  250  LSQDYIRQGRLVPVFGEQRSSAVSAHHLVFPRTNANLPRVARFLQWMQQQLGHDLNY  306
            L+Q Y++ G L+ V  +  SS+V+AHHLVFP++++++PRV RFL+WM+ +LGH++ +
Sbjct  249  LAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGHGFVF  305

11) AB57_1043 in NC_011586


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELA  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

12) ABBFA_002644 in NC_011595


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELA  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

13) ABAYE2827 in NC_010410


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELA  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

14) ABD1_09200 in NC_020547


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1268),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 186/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKELILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ ELILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELA  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

15) ACICU_00928 in NC_010611


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

16) BJAB07104_01063 in NC_021726


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

17) BJAB0868_01077 in NC_021729


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

18) ABTJ_02844 in NC_017847


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

19) ABZJ_01069 in NC_017171


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

20) M3Q_1265 in NC_018706


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  338 bits (1267),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 185/300 (62%), Positives = 255/300 (85%), Gaps = 0/300 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPV+ + DLL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

21) AOLE_14510 in NC_014259


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  337 bits (1264),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 187/301 (63%), Positives = 256/301 (86%), Gaps = 0/301 (0%)

Query  1    MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQNLFI  60
            M + ++  +++P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG++LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE  120
            R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL  180
            +F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLL
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  ERSPVNKPQDLLKKELILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL  240
            ERSPVN + DLL+ ELILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFVLESNLLTQNYLDSGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIYDELA  300
            GF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W+  EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

Query  301  D  301
            +
Sbjct  301  H  301

22) ABK1_0952 in NC_017162


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  334 bits (1252),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 184/290 (64%), Positives = 249/290 (86%), Gaps = 0/290 (0%)

Query  1    MPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFIRGARGVTLTP  60
            +P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+R+ARGVTLTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  61   SGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLESFKEKFPMIQ  120
             GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE+F+   P IQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  121  VNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLLERSPVHKPQD  180
            +NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLLERSPV+ + D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  181  LLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGLGFVLESNLLT  240
            LL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGLGF LES LL+
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  241  QNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS  290
            Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

23) ABTW07_1057 in NC_017387


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  334 bits (1252),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 184/290 (64%), Positives = 249/290 (86%), Gaps = 0/290 (0%)

Query  1    MPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFIRGARGVTLTP  60
            +P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+R+ARGVTLTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  61   SGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLESFKEKFPMIQ  120
             GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE+F+   P IQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  121  VNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLLERSPVHKPQD  180
            +NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLLERSPV+ + D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  181  LLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGLGFVLESNLLT  240
            LL+ +LILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+LEAA+HGLGF LES LL+
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  241  QNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS  290
            Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

24) gcvA in NC_016603


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  322 bits (1208),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 180/290 (63%), Positives = 244/290 (85%), Gaps = 4/290 (1%)

Query  1    MPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFIRGARGVTLTP  60
            +P++K++QAFEQTARFGN+A+AAE L+LTPSAVSHQ+AKLE MIG+ LF+R+ARGVTLTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  61   SGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLESFKEKFPMVQ  120
             GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGLLWL+PRLE+F+   P +Q
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  121  VNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLLERSPVYKPQD  180
            +NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + VLASPKLLERSPV  + D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  181  LLKKELILSRSTLVTWPQWFAHQQVV----PYTLSFDRSYMSLEAATHGLGFVLESNLLT  236
            LL+ ELILS +TL+ WP+ FA++ +     PYTLSFDRSYM+LEAA+HGLGF LES LL+
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  237  QNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELA  286
            Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL+W++ EL+
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

25) A1S_0966 in NC_009085


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  284 bits (1063),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 154/248 (63%), Positives = 209/248 (85%), Gaps = 0/248 (0%)

Query  1    MIGQSLFIRGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGL  60
            MIG+ LF+R+ARGVTLTP GE+Y+++V+ +LH+L +ATE+AA   + D L +HSSPSFGL
Sbjct  53   MIGRQLFVRAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGL  112

Query  61   LWLLPRLESFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLE  120
            LWL+PRLE+F+   P IQ+NLSCSYE+LHF+RDKID+DIRHG PNW + E+RT+R+E + 
Sbjct  113  LWLMPRLEAFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFA  172

Query  121  VLASPKLLERSPVHKPQDLLKKELILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMS  180
            VLASPKLLERSPV+ + DLL+ ELILS +TL+ WP+ FA++GL+ PE PYTLSFDRSYM+
Sbjct  173  VLASPKLLERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMT  232

Query  181  LEAATHGLGFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFL  240
            LEAA+HGLGF LES LL+Q+YL+SG L+ V ++ LS P++AHHLV+P++H  +P++  FL
Sbjct  233  LEAASHGLGFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFL  292

Query  241  NWIHDELA  248
            +W++ EL+
Sbjct  293  EWMESELG  300

26) ampR7 in NC_014258


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  281 bits (1051),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 157/295 (54%), Positives = 225/295 (77%), Gaps = 0/295 (0%)

Query  2    EKQSEHLPSIKSLRVFEQVAHFGNVARAAEELSITPSAASHQLAKLERELGCILFNRSAK  61
            +    +LP++K+++ FEQ A+FGN+ARAAE L +TPSA SHQLAKLE  +G  LF R+A+
Sbjct  5    DDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAAR  64

Query  62   GVTLTLSGEHYLREIGPILLCLAQATARISNEKARSNLRIHCAPSFGLLWLLPRIHKFRD  121
            GVTLT  GE+YL+E++ +L  LA AT R +++ +   LR+H +PSFGLLWL+PR++ FR 
Sbjct  65   GVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRI  124

Query  122  SYPEFQLTLSCSYENLSFSRDNIDIAIRHGFPDWNAFEIKTIRHEKMSVLASPDYLKQHP  181
            S P++Q+ LSCSYE+L FSRD+ID+ IRHG P+W ++E++T+RHE  +VLASP  L + P
Sbjct  125  SHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSP  184

Query  182  VSQAADLIHHALILSESPLIQWPQWFAAQQLPQPDKEWLFRFDRSYMSLEAAMLGHGLIF  241
            V+ AADL++  LILSE+ L++WP+ FA + L++P+K   + FDRSYM+LEAA  G G+ +
Sbjct  185  VNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFAL  244

Query  242  ESELLAEDYLRSGKLVRVLTEQHSLPVSAHHLVFPRGFAQYPRVAHFLSWIQEEL  296
            ES LLA+ YL+SG L+ V  +  S PV+AHHLVFP++ + +PRV +FL W++ EL
Sbjct  245  ESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL  299

27) lysR in NC_016626


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  270 bits (1010),  Expect = 5e-74, Method: Compositional matrix adjust.
 Identities = 152/291 (53%), Positives = 222/291 (77%), Gaps = 0/291 (0%)

Query  3    LPPLKSIIAFESVARTKSVNRAADELGLTPSAVSHQLANLESIVGRPLFTRLGRGLVLTP  62
            LPPLK+I AFE  AR  ++ RAA+ L+LTPSAVSHQLA+LE+++GR LF R +RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGTQYLSDVTGALAELNRATERASSETSIEILRIHSSPSFGLMWLLPRLAAFQEANGDIQ  122
             G QYL +V+G L  L  ATERA+S+ S++ LR+HSSPSFGL+WL+PRL AF+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  MNLACSYEDVSFTSGYYDIDVRHGYAHWTDVEVKTLRHETIAPLASRAYLERYPVSAPED  182
            +NL+CSYE + F+ +  D+D+RHG ++W   EV+T+RHET+A LAS   LER PV+++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLERRLIFSESPLVQWQQWFGKFGVAVKRKAFDFAFDRSYMSLEAAALGHGIALESTMLA  242
            LL+  LI+SE+ L++W + F++ G+A   K++ ++FDRSYM+LEAA+ G G+ALEST+LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVHLERGSLVPVFGKEYAVEVGAHHLVYPSQNAGLPRVAKFLAWMDRQIER  293
               L+ G+L+ V     +  V+AHHLV+P  ++++PRV +FL WM+ ++ +
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH  301

28) BRPE64_DCDS04580 in NC_021289


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  270 bits (1008),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 154/289 (54%), Positives = 221/289 (77%), Gaps = 0/289 (0%)

Query  3    LPPLKSIIAFESVARTKSVNRAADELGLTPSAVSHQLANLESIVGRPLFTRLGRGLVLTP  62
            LPPLK+I AFE  AR  ++ RAA+ L+LTPSAVSHQLA+LE+++GR LF R +RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGTQYLSDVTGALAELNRATERASSETSVEILRIHSSPSFGLMWLLPRLAAFQEANGDIQ  122
             G QYL +V+G L  L  ATERA+S+ S++ LR+HSSPSFGL+WL+PRL AF+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  MNLACSYEDVSFTSGYYDIALRHGYAHWTDVEVKTLRHETIAPLASRAYLERFPVTAPDD  182
            +NL+CSYE + F+ +  D+ +RHG ++W   EV+T+RHET+A LAS   LER PV ++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLERRLILSETPLVQWPQWFGKFGVAFRRKAFDFSFDRSYMSLEAAALGHGIALESTMLA  242
            LL+  LILSE+ L++WP+ F++ G+A   K++ +SFDRSYM+LEAA+ G G+ALEST+LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVHLERGSLVPVFGRDYAVEVGAHHLVYPSQNAGLPRVAKFLAWMDQQI  291
               L+ G+L+ V  +  +  V+AHHLV+P  ++++PRV +FL WM+ ++
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL  299

29) D781_2335 in NC_020064


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  268 bits (1002),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 153/296 (52%), Positives = 226/296 (77%), Gaps = 0/296 (0%)

Query  2    EIQKAAIPSIKALQVFEQVAHFGNVARAAEELNITPSAASHQLAKLEKLVGNSLFNRSAK  61
            +   + +P++KA+Q FEQ A+FGN+ARAAE L++TPSA SHQLAKLE ++G  LF R+A+
Sbjct  5    DDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAAR  64

Query  62   GVSLTLAGETYLREISqlllnlaqataqIRDQKENNALRIHCAPSFGLLWLLPRLKQLHE  121
            GV+LT  GE YL+E+S LL +LA AT +   +   + LR+H +PSFGLLWL+PRL  ++ 
Sbjct  65   GVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRI  124

Query  122  ACPELNVTLSCSYENLSFSRDNIDVAIRHGFPDWSPFDIKTIRDEFITAMASPDYLRRHP  181
            + P++++ LSCSYE+L FSRD+IDV IRHG P+W++++++T+R+E ++ +ASP  L R P
Sbjct  125  SHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSP  184

Query  182  APTPAALAEHRLILSETPLIQWPQWFAAHHLPQPERPWVFSFDRSYMSLQAARLGHGVVL  241
              ++A L +  LILSE+ L++WP+ FA H L++PE+P  +SFDRSYM+L+AA  G G  L
Sbjct  185  VNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFAL  244

Query  242  ESELLAQDYLRDGSLVRLFPPALSLPVSAHHLVYPRGFGQLARVKRFLHWMQQALD  297
            ES LLAQ YL+ G+L+ + P  LS PV+AHHLV+P++ + ++RV+RFL+WM+  L+
Sbjct  245  ESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

30) CNE_BB1p07940 in NC_015727


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  266 bits (996),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 152/292 (53%), Positives = 225/292 (78%), Gaps = 0/292 (0%)

Query  3    IPPVKAIIAFESVARTKSVSRASEELGLTASAVSHQIGNLEEALGQALFFRQGRGLVLTP  62
            +PP+KAI AFE  AR  +++RA+E L+LT+SAVSHQ+++LE  +G+ LF R +RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   VGEQYLRDITGVLADLNRATERASSPANIEILRVHSSPSFGLMWLLPRLESFQADNGDIQ  122
            VGEQYL++++G+L  L  ATERA+S  +++ LR+HSSPSFGL+WL+PRLE+F+  + DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLSCSYEDISFTGGYYDVDIRHGYAHWRDVEVRTLRRETIAPLASPAYLEKHPIATPTD  182
            +NLSCSYE + F+ +  DVDIRHG ++W   EVRT+R+ET+A LASP  LE+ P+ +++D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAQRLIYSETPLVQWQQWLARFGVAGGRKTFDFTFDRSYMSLETAALGLGVALESTLLA  242
            LL   LI SE+ L++W + +A+ G+A   K + ++FDRSYM+LE+A+ GLG ALESTLLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVMIRKGALVPVFDDAHAIEVGSHHLVYPQQNTDLPRVARFLAWMERQLSNS  294
               ++ GAL+ V  +  +  V++HHLV+P+ ++ +PRV RFL WME +L+++
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGHG  302

31) NH8B_2714 in NC_016002


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  262 bits (979),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 154/290 (54%), Positives = 218/290 (76%), Gaps = 0/290 (0%)

Query  3    IPPLKSIIAFESVARTKSVNRAAEELGLTASAVSHQIANLESKIGRPLFTRMGRGLVLTP  62
            +PPLK+I AFE  AR  ++ RAAE L+LT+SAVSHQ+A+LE+ IGR LF R +RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   IGEQYLSEVTGSLADLSRATERAANQSEVDILRVHSSPSFGLMWLLPRLTSFQEMNGDIQ  122
            +GEQYL EV+G L  L+ ATERAA++  +D LR+HSSPSFGL+WL+PRL +F+  + DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYEDVSFTGGYYDVDIRYGYGYWKDVEVRTLRNEYITPLASKDYLAKYPIKTPED  182
            +NL+CSYE + F+ +  DVDIR G   W   EVRT+R+E ++ LAS   L + P++++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLGQRLIFSETPLVKWQQWFGRHGVAAAHTTFDFSFDRSYMSLETAALGIGIALESTLLA  242
            LL   LI+SE+ L+KW + F++HG+A ++  + +SFDRSYM+LE+A+ G+G+ALESTLLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVHLQRGTLVPVFDEHYAVEVGAHHLVCPSQNADLPRVARFIEWIEKQLG  292
               LQ G+L+ V  +  +  V+AHHLV P  ++ +PRV RF+EW+E +LG
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

32) BUPH_05965 in NC_018672


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  261 bits (975),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 149/291 (52%), Positives = 220/291 (76%), Gaps = 0/291 (0%)

Query  3    IPPVKAIIAFESVARTGSVNRASEELGLTASAVSHQISNLESVIGQALFYRSGRGLVLTP  62
            +PP+KAI AFE  AR G++ RA+E L+LT+SAVSHQ+++LE++IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLSDVTGSLADLSRATERASSRTEVEILRVHSSPSFGLMWLLPRLASFQEANGDIQ  122
             GE+YL +V+G L  L+ ATERA+S   ++ LR+HSSPSFGL+WL+PRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYEDVSFTSGYYDIDIRHGYANWRDLEVRTLRNEFIAPLASPAYLRNHPVATPED  182
            +NL+CSYE + F+ +  D+DIRHG +NW   EVRT+R+E +A LASP  L   PV ++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWQQWFGRTGVSAKQKTFDFSFDRSYMSLETAALGLGIALESLMLA  242
            LL   LI SE+ L++W + F++ G++  +K + +SFDRSYM+LE+A+ GLG+ALES +LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVRIREGALVPVFDQSHAVEVGAHHLVYPPQNADLPRVVRFIAWIEREIGH  293
               ++ GAL+ V  +  +  V+AHHLV+P  ++ +PRV RF+ W+E E+GH
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH  301

33) BC1003_4374 in NC_014540


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  260 bits (972),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 150/291 (52%), Positives = 221/291 (76%), Gaps = 0/291 (0%)

Query  3    IPPVKAIIAFESVARTGSVNRASEELGLTASAVSHQISNLESIIGQALFYRSGRGLVLTP  62
            +PP+KAI AFE  AR G++ RA+E L+LT+SAVSHQ+++LE++IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLSDVTGSLADLSRATERASSRTEVQILRVHSSPSFGLMWLLPRLASFQQANGDIQ  122
             GE+YL +V+G L  L+ ATERA+S   ++ LR+HSSPSFGL+WL+PRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYEDVSFTSGYYDIDIRHGYANWRDLEVRTLRNEFIAPLASPSYLRDHPVNAPED  182
            +NL+CSYE + F+ +  D+DIRHG +NW   EVRT+R+E +A LASP  L   PVN++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWKQWFGRTGVSAKHKTFDFSFDRSYMSLETAALGLGIALESLMLA  242
            LL   LI SE+ L++W + F++ G++  +K + +SFDRSYM+LE+A+ GLG+ALES +LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVRIREGALVPVFDHSHAVEVGAHHLVYPPQNAELPRVARFIAWIEREIGQ  293
               ++ GAL+ V  H  +  V+AHHLV+P  ++ +PRV RF+ W+E E+G+
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH  301

34) Bamb_4415 in NC_008391


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  259 bits (967),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 155/294 (53%), Positives = 224/294 (77%), Gaps = 2/294 (0%)

Query  3    IPPLKAIIAFESVARTKSVNRAAEELGLTASAVSHQLSNLESQIGQPLFQRSGRGLVLTP  62
            +PPLKAI AFE  AR  ++ RAAE L+LT+SAVSHQL++LE+ IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLTDVTGSLADLSRATERASSRTEVDILRVHSSPSFGLMWLLPRLSSFQEANGDIE  122
             GE+YL +V+G L  L+ ATERA+S   +D LR+HSSPSFGL+WL+PRL +F+ ++ DI+
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYENVSFSNGFYDIDVRHGYGNWDNLEVRTVRGEFIAPLASPQYLERHPVKAPED  182
            +NL+CSYE++ FS +  D+D+RHG  NW + EVRTVR E +A LASP+ LER PV+++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWKQWFGRAGVSLAAQKTFDFSFDRSYMSLETAALGLGIALESLML  242
            LL   LI SE+ L++W + F++ G++  ++K + +SFDRSYM+LE+A+ GLG+ALES +L
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLA-RPEKPYTLSFDRSYMTLEAASHGLGFALESTLL  249

Query  243  ASVKIREGLLVPVFDATHAVEVGAHHLVYPRQNAELPRVKRFLAWIEREVAGHG  296
            A   ++ G L+ V     +  V+AHHLV+P+ ++ +PRV+RFL W+E E+ GHG
Sbjct  250  AQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHG  302

35) Bmul_4987 in NC_010086


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  258 bits (964),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 151/288 (53%), Positives = 218/288 (76%), Gaps = 0/288 (0%)

Query  3    IPPLKSIIAFESVARTKSVNRAAEELGLTASAVSHQLSNLEALIGRPLFQRSGRGLVLTP  62
            +PPLK+I AFE  AR  ++ RAAE L+LT+SAVSHQL++LEA+IGR LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLADVTGSLADLSRATERASSRTDVDILRVHSSPSFGLMWLLPRLSSFQEANGDLQ  122
             GE+YL +V+G L  L+ ATERA+S   +D LR+HSSPSFGL+WL+PRL +F+ ++ D+Q
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYENVSFSNGYYDIDIRHGYGNWDNLEVKTVRGEYIAPLASPAYLERHPVRTPED  182
            +NL+CSYE++ FS +  D+DIRHG  NW + EV+TVR E +A LASP  LER PV ++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWKQWFGRTGVSAKQKTFDFSFDRSYMSIETAALGLGIALESLTLA  242
            LL   LI SE+ L++W + F++ G++  +K + +SFDRSYM++E+A+ GLG+ALES  LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVKIRDGLLVPVFDDSYAVEVGAHHLVYPSQNAALPRIQRFLAWIERE  290
               ++ G L+ V  +  +  V+AHHLV+P  ++++PR++RFL W+E E
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESE  298

36) BMULJ_03527 in NC_010805


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  258 bits (964),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 151/288 (53%), Positives = 218/288 (76%), Gaps = 0/288 (0%)

Query  3    IPPLKSIIAFESVARTKSVNRAAEELGLTASAVSHQLSNLEALIGRPLFQRSGRGLVLTP  62
            +PPLK+I AFE  AR  ++ RAAE L+LT+SAVSHQL++LEA+IGR LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLADVTGSLADLSRATERASSRTDVDILRVHSSPSFGLMWLLPRLSSFQEANGDLQ  122
             GE+YL +V+G L  L+ ATERA+S   +D LR+HSSPSFGL+WL+PRL +F+ ++ D+Q
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYENVSFSNGYYDIDIRHGYGNWDNLEVKTVRGEYIAPLASPAYLERHPVRTPED  182
            +NL+CSYE++ FS +  D+DIRHG  NW + EV+TVR E +A LASP  LER PV ++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWKQWFGRTGVSAKQKTFDFSFDRSYMSIETAALGLGIALESLTLA  242
            LL   LI SE+ L++W + F++ G++  +K + +SFDRSYM++E+A+ GLG+ALES  LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVKIRDGLLVPVFDDSYAVEVGAHHLVYPSQNAALPRIQRFLAWIERE  290
               ++ G L+ V  +  +  V+AHHLV+P  ++++PR++RFL W+E E
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESE  298

37) BC1002_6121 in NC_014119


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  258 bits (964),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 149/288 (52%), Positives = 220/288 (77%), Gaps = 0/288 (0%)

Query  3    IPPLKAIIAFESVARTKSVNRAADELGLTASAVSHQLSNLESIIGQALFQRSGRGLVLTP  62
            +PPLKAI AFE  AR  ++ RAA+ L+LT+SAVSHQL++LE++IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLADVTGSLADLSRATERASSRTDVEILRVHSSPSFGLMWLLPRLSSFQEANDDIQ  122
             GE+YL +V+G L  L+ ATERA+S   ++ LR+HSSPSFGL+WL+PRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNVACSYENVSFSNGFYDIDVRHGYGNWTNVEVKTVRGEFIAPLASPKYLARHPVKTPED  182
            +N++CSYE++ FS +  D+D+RHG  NW + EV+TVR E +A LASPK L R PV+++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLSHRLIYSESPLVQWKQWFGRTGVSAAHKTFDFSFDRSYMSLETAALGLGIALESLMLA  242
            LL+  LI SE+ L++W + F++ G++ ++K + +SFDRSYM+LE+A+ GLG+ALES +LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVKIREGLLVPVFDASFAVEVGAHHLVYPAQNADLPRVERFLAWIERE  290
               ++ G L+ V    ++  V+AHHLV+P  ++ +PRV RFL W+E E
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESE  298

38) PCC21_021940 in NC_018525


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  258 bits (965),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 138/304 (46%), Positives = 217/304 (72%), Gaps = 1/304 (0%)

Query  1    MKKENNENLPIPSLRNIQSFLQVANCNSINTAAEQLNITPSAVSHQISTLERFIGKKLFI  60
            M+ +++ +  +P+L+ IQ+F Q A   ++  AAE L++TPSAVSHQ++ LE  IG++LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RNGKGVKLTLTGEKYLRDVSGAISEIGRATDQIINEGGKEILRVHSSPTFGLTWLMRRLG  120
            R ++GV LT  GE+YL++VSG +  ++ AT++  ++ + + LR+HSSP+FGL WLM RL 
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  YFRDQYPDITLNLTCSYENLQFSRDNIDIDIRHGIADWDAYKVLTIKKDTMIVMASPAYL  180
             FR   PDI +NL+CSYE+L+FSRD+ID+DIRHG ++W +Y V T++ +T  V+ASP  L
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  KQHPVINPEDLLTYELISSTSTLINWDKWFSYHNLSKSHINHSLSFDRSFMSFEAAKMGL  240
             + PV ++ DLL  ELI S +TL++W   F+ H L++++   +LSFDRS+M++EAA  GL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFILESKMLGTDFLREGSLVPVLSEDYAIPVNAHHIVMPHVNERTPKIKAFTDWVRKELQ  300
            GF LES +L+  +L+ G+L+ V ++  + PV AHH+V P  +   P+++ F +W+  EL 
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-  299

Query  301  TNGF  304
             +GF
Sbjct  300  GHGF  303

39) BC1001_5113 in NC_015137


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  257 bits (961),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 146/291 (51%), Positives = 220/291 (76%), Gaps = 0/291 (0%)

Query  3    IPPVKAIIAFESVARTGSVNRASEELGLTASAVSHQISNLESVIGQALFYRSGRGLVLTP  62
            +PP+KAI AFE  AR G++ RA+E L+LT+SAVSHQ+++LE++IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLSDVTGSLADLSRATERASSRTEVEILRVHSSPSFGLMWLLPRLASFQEANGDIQ  122
             GE+YL +V+G L  L+ ATERA+S   ++ LR+HSSPSFGL+WL+PRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYEDVSFTSGYYDIDIRHGYANWRDLEVRTLRNEFIAPLASPAYLRNHRVDTPED  182
            +NL+CSYE + F+ +  D+DIRHG +NW   EVRT+R+E +A LASP  L    V+++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWQQWFGRTGVSAKQKTFDFSFDRSYMSLETAALGLGIALESLMLA  242
            LL   LI SE+ L++W + F++ G++  +K + +SFDRSYM+LE+A+ GLG+ALES +LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVRIREGALVPLFDQSHAVEVGAHHLVYPPQNADLPRVARFIAWIEREIGQ  293
               ++ GAL+ +  +  +  V+AHHLV+P  ++ +PRV RF+ W+E E+G+
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH  301

40) BamMC406_4934 in NC_010552


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  257 bits (960),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 156/294 (54%), Positives = 222/294 (76%), Gaps = 2/294 (0%)

Query  3    IPPLKAIIAFESVARTKSVNRAAEELGLTASAVSHQLSNLESQIGQPLFQRSGRGLVLTP  62
            +PPLKAI AFE  AR  ++ RAAE L+LT+SAVSHQL++LE+ IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLTDVTGSLADLSRATERASSRTEVDILRVHSSPSFGLMWLLPRLSSFQEANGDIQ  122
             GE+YL +V+G L  L+ ATERA+S   +D LR+HSSPSFGL+WL+PRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYENVSFSNGFYDIDVRHGYGNWDNLEVRTVRGEFIAPLASPHYLERHPVKAPED  182
            +NL+CSYE++ FS +  D+D+RHG  NW + EVRTVR E +A LASP  LER PV+++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWKQWFGRAGVSLAAQKTFDFSFDRSYMSLETAALGLGIALESLML  242
            LL   LI SE+ L++W + F++ G++  ++K + +SFDRSYM+LE+A+ GLG+ALES +L
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLA-RPEKPYTLSFDRSYMTLEAASHGLGFALESTLL  249

Query  243  ASVKIREGLLVPVFDATHAVEVCAHHLVYPRQNAELPRVKRFLAWIEREVAGHG  296
            A   ++ G L+ V     +  V AHHLV+P+ ++ +PRV+RFL W+E E+ GHG
Sbjct  250  AQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHG  302

41) Bcenmc03_6259 in NC_010512


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 152/291 (53%), Positives = 222/291 (77%), Gaps = 1/291 (0%)

Query  3    IPPLKAIIAFESVARTKSVNRAAEELGLTASAVSHQLSNLEAQIGQPLFQRSGRGLVLTP  62
            +PPLKAI AFE  AR  ++ RAAE L+LT+SAVSHQL++LEA IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLADVTGSLADLSRATERASSRTEVDILRVHSSPSFGLMWLLPRLSSFQEANGDIQ  122
             GE+YL +V+G L  L+ ATERA+S   +D LR+HSSPSFGL+WL+PRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYENVSFSNGFYDIDVRHGYGNWDNLEVKTVRGEFIAPLASPRYLEQHPVRAPED  182
            +NL+CSYE++ FS +  D+D+RHG  NW + EV+TVR E +A LASP+ LE+ PV ++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWKQWFGRTGVPLAAQKTFDFSFDRSYMSLETAALGLGIALESLML  242
            LL   LI SE+ L++W + F++ G++  ++K + +SFDRSYM+LE+A+ GLG+ALES +L
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLA-RPEKPYTLSFDRSYMTLEAASHGLGFALESTLL  249

Query  243  ASVKIRQGLLVPVFGERHAVEVGAHHLVYPRQNAELPRVKRFLAWIEREVA  293
            A   ++ G L+ V  +  +  V+AHHLV+P+ ++ +PRV+RFL W+E E++
Sbjct  250  AQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

42) Bphy_5874 in NC_010625


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 152/291 (53%), Positives = 222/291 (77%), Gaps = 0/291 (0%)

Query  3    IPPVKAIVAFECIARTRSVNRAAEELGLTASAVSHQLSNLESIIGQPLFQRTGRGLVLTP  62
            +PP+KAI AFE  AR  ++ RAAE L+LT+SAVSHQL++LE++IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLADVTGSLADLSRATERASSRKEVDILRVHSSPSFGLMWLMPRLASFQEANGDIQ  122
             GE+YL +V+G L  L+ ATERA+S   +D LR+HSSPSFGL+WLMPRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYENVSFSNGYYDIDIRHGYGEWTHVEVKTLRGECIAPLASPKYLKQYPVKSPDD  182
            +NL+CSYE++ FS +  D+DIRHG  +W   EV+T+R E +A LASPK L + PV+S+ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIFSETPLVQWRQWFGRVGVAGAQKTFDFSFDRSYMSIETAALGLGIALESLMLA  242
            LL   LI+SE+ L++W + F++ G+A ++K + +SFDRSYM++E+A+ GLG+ALES +LA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVKIREGALVPVFDDAHSVEVGAHHLVYPSQNADLPRVARFIAWIEQEIER  293
               ++ GAL+ V  +  S  V+AHHLV+P  ++ +PRV RF+ W+E E+ +
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH  301

43) Reut_B4774 in NC_007348


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 150/289 (52%), Positives = 216/289 (75%), Gaps = 0/289 (0%)

Query  3    IPPMKAVIAFESVARTKSVSRAAEELGLTASAVSHQISNLESVIGRPLFFRQGRGLVLTP  62
            +PP+KA+ AFE  AR  +++RAAE L+LT+SAVSHQ+++LE++IGR LF R +RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   VGEQYLREVTGALADLNRATERASSQPDVEILRVHSSPSFGLMWLLPRLASFQAEHGDIR  122
            VGEQYL+EV+G L  L  ATERA+S+  ++ LR+HSSPSFGL+WL+PRL +F+  H DI+
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLSCSYEDISFTSGFYDVDIRHGYAHWRDLQVKTLRKEFIAPLASADYLRQHGIQTPQD  182
            +NLSCSYE + F+ +  DVDIRHG ++W   +V+T+R E +A LAS+  L +  ++++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLGQRLICSETPLVQWQQWFARFGINHVRKTFDFSFDRSYMSLETAALGLGVALESTLLA  242
            LL   LI SE+ L++W + FA+ G+ +  K + +SFDRSYM+LE+A+ GLG ALESTLLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  243  SVLLRSGRLVPVLDPTHAVEVGAHHVVYPAQNGDLPRVARFLAWIDREL  291
               L+SG L+ V     +  V+AHH+V+P  ++ +PRV RFL W++ EL
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL  299

44) perR in NC_016514


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  256 bits (956),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 142/299 (48%), Positives = 217/299 (73%), Gaps = 0/299 (0%)

Query  1    MPAQDRQTLPIPSLRNIQSFIAVANSLSIHLAAEQLNVTASAVSHQIASLESWMGKKLFI  60
            M A+D     +P+L+ IQ+F   A   ++  AAE L++T+SAVSHQ+A LE+ +G++LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RSGKGVTLTPTGEKYLRDVSAAMSAIGRATEQVMKEADNPVLRVHSSPTFGLTWLLRRLG  120
            R+++GVTLTP GE+YL++VS+ + +++ ATE+   +     LR+HSSP+FGL WL+ RL 
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  KFRSEYPDITVNLSCSYENLQFARDNIDIDIRHGIPDWDAYRVMTIKNDALVVLASPAYL  180
             FR   PDI +NLSCSYE+L+F+RD+ID+DIRHG P+W +Y V T++++++ VLASP  L
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  HAHPVNTPQDLLSQALISSTSTLVNWEKWFAWHNIDRPWLNFSLSFDRSYMSFEAARMGL  240
            +  PVN++ DLL+  LI S +TL++W   FA H + RP   ++LSFDRSYM++EAA  GL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFILESKMMATDHLNDGALVQVLPDETGIAINAHHLVMPHMNERTWKIQQFVEWIDREL  299
            GF LES ++A   L+ GAL++V P+  + ++ AHHLV P  +    ++++F+EW++ EL
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL  299

45) Bcen_6426 in NC_008062


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  256 bits (957),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 153/291 (53%), Positives = 222/291 (77%), Gaps = 1/291 (0%)

Query  3    IPPLKAIIAFESVARTKSVNRAAEELGLTASAVSHQLSNLEAQIGQPLFQRSGRGLVLTP  62
            +PPLKAI AFE  AR  ++ RAAE L+LT+SAVSHQL++LEA IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLADVTGSLADLSRATERASSRTEVDILRVHSSPSFGLMWLLPRLSSFQEANGDIQ  122
             GE+YL +V+G L  L+ ATERA+S   +D LR+HSSPSFGL+WL+PRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYENVSFSNGFYDIDVRHGYGNWDNLEVKTVRGEFIAPLASPQYLERHPVRAPED  182
            +NL+CSYE++ FS +  D+D+RHG  NW + EV+TVR E +A LASP+ LER PV ++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWKQWFGRTGVPLAAQKTFDFSFDRSYMSLETAALGLGIALESLML  242
            LL   LI SE+ L++W + F++ G++  ++K + +SFDRSYM+LE+A+ GLG+ALES +L
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLA-RPEKPYTLSFDRSYMTLEAASHGLGFALESTLL  249

Query  243  ASVKIRQGLLVPVFGERHAVEVGAHHLVYPRQNAELPRVKRFLAWIEREVA  293
            A   ++ G L+ V  +  +  V+AHHLV+P+ ++ +PRV+RFL W+E E++
Sbjct  250  AQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

46) Bcen2424_6661 in NC_008544


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  256 bits (957),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 153/291 (53%), Positives = 222/291 (77%), Gaps = 1/291 (0%)

Query  3    IPPLKAIIAFESVARTKSVNRAAEELGLTASAVSHQLSNLEAQIGQPLFQRSGRGLVLTP  62
            +PPLKAI AFE  AR  ++ RAAE L+LT+SAVSHQL++LEA IG+ LF R++RG+ LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  63   TGERYLADVTGSLADLSRATERASSRTEVDILRVHSSPSFGLMWLLPRLSSFQEANGDIQ  122
             GE+YL +V+G L  L+ ATERA+S   +D LR+HSSPSFGL+WL+PRL +F+ ++ DIQ
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  123  LNLACSYENVSFSNGFYDIDVRHGYGNWDNLEVKTVRGEFIAPLASPQYLERHPVRAPED  182
            +NL+CSYE++ FS +  D+D+RHG  NW + EV+TVR E +A LASP+ LER PV ++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  183  LLAHRLIYSETPLVQWKQWFGRTGVPLAAQKTFDFSFDRSYMSLETAALGLGIALESLML  242
            LL   LI SE+ L++W + F++ G++  ++K + +SFDRSYM+LE+A+ GLG+ALES +L
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLA-RPEKPYTLSFDRSYMTLEAASHGLGFALESTLL  249

Query  243  ASVKIRQGLLVPVFGERHAVEVGAHHLVYPRQNAELPRVKRFLAWIEREVA  293
            A   ++ G L+ V  +  +  V+AHHLV+P+ ++ +PRV+RFL W+E E++
Sbjct  250  AQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

47) Dda3937_00377 in NC_014500


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  256 bits (957),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 140/305 (46%), Positives = 222/305 (73%), Gaps = 1/305 (0%)

Query  1    MSSHEASKLPLPSLRNIQAFLEVANTQSINVAAEKLNITASAVSHQIATLEKFLNKKLFI  60
            M +++ +   LP+L+ IQAF + A   ++  AAE L++T+SAVSHQ+A LE  + ++LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RNGKGVTLTEHGEIYLREVSGAISIIGRATDKMINESSNEILRVHSSPSFGMIWLMRRLG  120
            R ++GVTLT  GE YL+EVSG +  ++ AT++  ++ S + LR+HSSPSFG++WLM RL 
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  KFRTLHPDITINLTCSYENLQFARDNIDIDIRHGIPDWDAYRVMTIKNERLKVMASPEYI  180
             FR  HPDI INL+CSYE+L+F+RD+ID+DIRHG P+W +Y V T+++E + V+ASP  +
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  SKNPINHPEEILNHNLIYSSTTLANWDKWFSYCDIKYARPGFNLSFDRSYMSFEAARMGL  240
             ++P+N + ++LN +LI S +TL +W   F+  ++  +   + LSFDRSYM++EAA  GL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GLILESSMMGEEFLKSGSLVQVFPREFEYPVNAHHIVMPHINERTHKVKVFIEWMRHELA  300
            G+ LES+++++ +L+SG+L++V P+ +  PV AHH+V P  +    +V+ F+EWM  EL+
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELG  300

Query  301  IDGYV  305
             +G+V
Sbjct  301  -HGFV  304

48) ECL_03996 in NC_014121


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  249 bits (929),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 141/299 (48%), Positives = 220/299 (74%), Gaps = 0/299 (0%)

Query  1    MSAQDRQTLSLPSLRNLQAFIAVANALSIHQAAEQLNVTPSAVSHQIASLESWMGKKLFI  60
            M A+D    +LP+L+ +QAF   A   ++ +AAE L++TPSAVSHQ+A LE+ +G++LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RSGKGVQLTPTGEKYLREVSAAMSAIGRATDQIVKEKDNAVLRVHSSPTFGLSWLLRRLG  120
            R+++GV LTP GE+YL+EVS+ + +++ AT++   +     LR+HSSP+FGL WL+ RL 
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  KFRAEYPDITINLTCSYENLQFARDNIDIDIRHGIPDWDAYRVMTIKNDTLVVLASPEYA  180
             FR   PDI INL+CSYE+L+F+RD+ID+DIRHG P+W +Y V T++++T+ VLASP   
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  QKHPISTPTDllqqslisststlVNWEKWFAWHNIDRPWLNFSLSFDRSYMSFEAARMGL  240
            ++ P+++++DLL+  LI S +TL++W   FA H + RP   ++LSFDRSYM++EAA  GL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFILESKMMATDHLKDGSLVQVLPDEMGIAINAHHLVMPHMHERAWKIQQFVEWIDREL  299
            GF LES ++A   L+ G+L++V P+ ++ ++ AHHLV P  H    ++++F+EW++ EL
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL  299

49) A3UG_17525 in NC_018079


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  247 bits (923),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 140/299 (47%), Positives = 220/299 (74%), Gaps = 0/299 (0%)

Query  1    MSAQDRQTLSLPSLRNLQAFIAVANALSIHQAAEQLNVTPSAVSHQIASLESWMGKKLFI  60
            M A+D    +LP+L+ +QAF   A   ++ +AAE L++TPSAVSHQ+A LE+ +G++LF+
Sbjct  1    MRADDDPHSNLPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFV  60

Query  61   RSGKGVQLTPTGEKYLREVSAAMSAIGRATDQIVKEKDNAVLRVHSSPTFGLSWLLRRLG  120
            R+++GV LTP GE+YL+EVS+ + +++ AT++   +     LR+HSSP+FGL WL+ RL 
Sbjct  61   RAARGVTLTPVGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLE  120

Query  121  KFRAEYPDITINLTCSYENLQFARDNIDIDIRHGIPDWDAYRVMTIKNDTLVVLASPEYA  180
             FR   PDI INL+CSYE+L+F+RD+ID+DIRHG P+W +Y V T++++T+ VLASP   
Sbjct  121  AFRISHPDIQINLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLL  180

Query  181  QKHPISTPTDllqqslisststlVNWEKWFAWHNIDRPWLNFSLSFDRSYMSFEAARMGL  240
            ++ P+++++DLL+  LI S +TL++W   FA H + RP   ++LSFDRSYM++EAA  GL
Sbjct  181  ERSPVNSAADLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGL  240

Query  241  GFILESKMMATDHLKDGSLVQVLPDEMGIAINAHHLVMPHMNERAWKIQQFVEWIDREL  299
            GF LES ++A   L+ G+L++V P+ ++ ++ AHHLV P  +    ++++F+EW++ EL
Sbjct  241  GFALESTLLAQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL  299

50) ROD_07971 in NC_013716


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  245 bits (916),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 140/294 (48%), Positives = 214/294 (73%), Gaps = 1/294 (0%)

Query  12   VPSLRNIQAFIEVADTGSLNTAAENLNITASAVSHQIASLENFLGKKLFSRSSKGVKLTT  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GV LT 
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   IGERYLKEVSGALNMIGQATNQVIHDIHQDYLRIHSAPSFGLLWLMPRLDRFRQAWPELK  131
            +GE+YLKEVSG L+ ++ AT++   D+  D LR+HS+PSFGLLWLMPRL+ FR + P+++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLAQWPTLVVKTIRNERMLPYTSQAWLESHPLQTPED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  V+T+R+E     +S   LE  P++++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLSCDLIHSDSTLINWNNWFSWHKVRGFNKNFIFNFDRSYMSIEAARMGLGVILESNLLA  251
            LL+ +LI S++TL++W + F+ H +   +K + ++FDRSYM++EAA  GLG  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GESLRKQHLRPVFADDVSMSVNAHHLVMPHTSEQKAKVKAFIAWISEELDAAGF  305
               L+   L  V ++ +S +V AHHLV P +    ++V+ F+ W+  EL + GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

51) KPR_3763 in NC_021232


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  244 bits (912),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 141/294 (48%), Positives = 218/294 (75%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVTLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GVTLT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPALK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P ++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNERVQPYSAASYLASHPVQAVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSNWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFADERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V ++  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

52) KPN2242_06935 in NC_017540


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  244 bits (909),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 141/294 (48%), Positives = 218/294 (75%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVTLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GVTLT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPALK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P ++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNERVLPYSAASYLASQPVQAVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSNWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFADERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V ++  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

53) A79E_3417 in NC_018522


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  243 bits (907),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 141/294 (48%), Positives = 218/294 (75%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVTLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GVTLT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPALK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P ++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNERVLPYSAASYLASHPVQAVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSNWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFADERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V ++  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

54) KPN_00825 in NC_009648


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  243 bits (907),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 141/294 (48%), Positives = 218/294 (75%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVTLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GVTLT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPALK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P ++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNERVLPYSAASYLASHPVQAVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSNWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFADERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V ++  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

55) KP1_1779 in NC_012731


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  243 bits (907),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 141/294 (48%), Positives = 218/294 (75%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVTLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GVTLT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPALK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P ++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNERVLPYSAASYLASHPVQAVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSNWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFADERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V ++  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

56) Kvar_3556 in NC_013850


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  242 bits (903),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 140/294 (48%), Positives = 216/294 (74%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVMLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GV LT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNKIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPELK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P+++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNECVLPYSAASYLASHPVHAVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSSWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W+  ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFDDERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V  +  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

57) KPK_3746 in NC_011283


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  241 bits (901),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 140/294 (48%), Positives = 216/294 (74%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVMLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GV LT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPELK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P+++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNECVLPYSAASYLASHPVHAVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSSWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W+  ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFDDERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V  +  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

58) KPHS_16530 in NC_016845


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  241 bits (900),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 141/294 (48%), Positives = 217/294 (74%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVTLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GVTLT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPALK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P ++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNERVLPYSAASYLACHPVQVVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV+   D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSNWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFADERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V ++  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

59) N559_3511 in NC_022082


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  241 bits (900),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 141/294 (48%), Positives = 217/294 (74%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLFSRSSKGVTLTA  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GVTLT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   VGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPALK  131
            VGE+YLKEVSG L+ ++ AT +  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P ++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNERVLPYSAASYLACHPVQVVED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  VRT+++E     +++  L   PV+   D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLINWSNWLSWHKVRGWHKNFIFNFDRSYMSIEAARMGMGVILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G  LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GGHVRQGQLTPVFADERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGELKEEGF  305
               ++ G L  V ++  S PV+AHH+V+P A+    +V+RF+ W+ +EL  +GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESEL-GHGF  303

60) CFSAN002050_10650 in NC_021818


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  236 bits (879),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 134/294 (46%), Positives = 215/294 (74%), Gaps = 1/294 (0%)

Query  12   VPSLRNIQAFIEVADTNSLNLAAENLNVTASAVSHQIASLEQYLGKKLFSRSSKGVVLTA  71
            +P+L+ IQAF + A   +L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GV LT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   IGEKYLKEVSGALNIIGQATNQVINDIHQDYLRIHSAPSFGLLWLMPRLNKFRQAWPELK  131
            +GE+YLKEVSG L+ ++ AT++  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P+++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLVVKTIKNERMLPYTSSTYLASHSIQNIED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  V+T+++E     +S+  L   ++++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLGCDLIHSDSTLINWSNWLSWHKVRGWNKNFIFNFDRSYMSIEAARMGMGIILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G+ LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GQSVSQRHLAPVFTTDVSMPVNAHHFVLPHHNEQKEKVRIFFNWVSKELSREGF  305
             + +    L  V    +S PV AHH+V+P  +    +VR F++W+  EL++ GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH-GF  303

61) SPAB_02694 in NC_010102


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  236 bits (879),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 134/294 (46%), Positives = 215/294 (74%), Gaps = 1/294 (0%)

Query  12   VPSLRNIQAFIEVADTNSLNLAAENLNVTASAVSHQIASLEQYLGKKLFSRSSKGVVLTA  71
            +P+L+ IQAF + A   +L  AAE L++T+SAVSHQ+A LE  +G++LF R+++GV LT+
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   IGEKYLKEVSGALNIIGQATNQVINDIHQDYLRIHSAPSFGLLWLMPRLNKFRQAWPELK  131
            +GE+YLKEVSG L+ ++ AT++  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P+++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLVVKTIKNERMLPYTSSTYLASHSIQNIED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  V+T+++E     +S+  L   ++++  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLGCDLIHSDSTLINWSNWLSWHKVRGWNKNFIFNFDRSYMSIEAARMGMGIILESNLLA  251
            LL  +LI S++TL++W++ ++ H +   +K + ++FDRSYM++EAA  G+G+ LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GQSVSQRHLAPVFTTDVSMPVNAHHFVLPHHNEQKEKVRIFFNWVSKELSREGF  305
             + +    L  V    +S PV AHH+V+P  +    +VR F++W+  EL++ GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH-GF  303

62) KOX_15045 in NC_016612


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  235 bits (875),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 134/294 (46%), Positives = 215/294 (74%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVADTGSLNLAAENLNITASAVSHQIASLEQYLGKKIFSRSSKGMVLTT  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G+++F R+++G+ LT 
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   IGEKYLKEVSGALNIIGQATNQVINDIHQDYLRIHSAPSFGLLWLMPRLDKFRQAWPELK  131
            +GE+YLKEVSG L+ ++ AT++  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P+++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLVVKTIKNERVLPFSSSTYLAGRDVQSIED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  V+T+++E    ++S+  L    V+S  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLIGWSNWLSWHKVRGWNKNFIFNFDRSYMSIEAARMGMGIILESNLLA  251
            LL  +LI S++TL+ W++ ++ H +   +K + ++FDRSYM++EAA  G+G+ LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GQSVSQRHLEPVFTRDVSMPVNAHHFVLPHPNEQKEKVKIFFAWVAEELSREGF  305
             + +    L  V  + +S PV AHH+V+P ++    +V+ F+ W+  EL++ GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH-GF  303

63) A225_1836 in NC_018106


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  234 bits (872),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 134/294 (46%), Positives = 215/294 (74%), Gaps = 1/294 (0%)

Query  12   MPSLRNIQAFIEVADTGSLNLAAENLNITASAVSHQIASLEQYLGKKIFSRSSKGMVLTT  71
            +P+L+ IQAF + A  G+L  AAE L++T+SAVSHQ+A LE  +G+++F R+++G+ LT 
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  72   IGEKYLKEVSGALNIIGQATNQVINDIHQDYLRIHSAPSFGLLWLMPRLNKFRQAWPELK  131
            +GE+YLKEVSG L+ ++ AT++  +D+  D LR+HS+PSFGLLWLMPRL+ FR + P+++
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  132  ISLTCSYESIQFSRDNIDIDIRHGLSQWPTLVVKTIKNERVLPFSSSTYLAGRDVQSIED  191
            I+L+CSYES++FSRD+ID+DIRHG ++WP+  V+T+++E    ++S+  L    V+S  D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  192  LLACDLIHSDSTLIGWSNWLSWHKVRGWNKNFIFNFDRSYMSIEAARMGMGIILESNLLA  251
            LL  +LI S++TL+ W++ ++ H +   +K + ++FDRSYM++EAA  G+G+ LES LLA
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  252  GQSVSQRHLEPVFTRDVSMPVNAHHFVLPHPNEQKEKVKIFFAWVAEELSREGF  305
             + +    L  V  + +S PV AHH+V+P ++    +V+ F+ W+  EL++ GF
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH-GF  303

64) Bpro_1453 in NC_007948


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  184 bits (682),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 119/291 (41%), Positives = 191/291 (66%), Gaps = 1/291 (0%)

Query  2    LPPLPSLVAFEAIARRRSFALAASELHLTPSAVSHQVARLEDFLGVKLFERSSRGVKLSP  61
            LPPL ++ AFE  AR  ++A AA  L+LTPSAVSHQ+A+LE  +G +LF R++RGV L+P
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  62   AGEAYLLRVGGALGALSAATDDVRQGVR-NSLYVHASPSFASLWLMPRIGQFAQAYPGVS  120
             GE YL  V+G L +L+ AT+    +V  + L +H+SPSF+ LWLMPR+  F  + P++ 
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  121  LFLSASHVHSDFELGQVDLDIRYGLPAWPQLVVKPIFREPIMPLASAAFIERHQIRTPAD  180
            + LS S    +F  +++D+DIR G P WP   V+ + +E +  LAS+ ++ER  + ++AD
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  181  LLQVPLIQSTVGVVQWADWFALYHPAKKPERFALRFDRALMALDAAVQGLGVALESAVIG  240
            LL+  LI S   +++W++ FA    A+    ++L FDR+ M+L+AA +GLG ALES++++
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  241  GGHIEAGRLQPVFDPAWAIPVQAHFVVYPERHGYRSEVAQFLEWLGTQVNE  291
               +++G L  V     + PV AH +V+P  H+  + V +FLEW+ +++ +
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGH  301

65) Alide_2374 in NC_014910


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 128/288 (45%), Positives = 186/288 (65%), Gaps = 1/288 (0%)

Query  2    IPPLSALQAFEAVARRRSFSLAATELHLTPSAISHQLAKLENLLGVRLFERSSRGVDLTP  61
            +PPL A+QAFE  AR  +++ AA  L+LTPSA+SHQLAKLE ++G +LF R++RGV LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  62   AGHSYLQRVGNALGAISTATDALRHGVQ-DSLYLHCSPSFASLWLMPRIARFAQRNPGIS  120
             G+ YL+ V+  L +++ AT+    +V  D L LH SPSF+ LWLMPR+  F   +P+I 
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  121  LVLSASHVHSDFQLGLVDLDIRYGLPTWPHLEVEPIFSEKVLPLASPEFIRRHALHTPQD  180
            + LS S    +F  + +D+DIR G P WP  EV  +  E    LASP ++ R +++++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  181  LLQVPLIQSMINVAQWPEWFARFEPAHRPERIALKFDRAMMSLDAAVQSLGVALESACLG  240
            LL+  LI S   + +WPE FA+   A+     +L FDR+ M+L+AA ++LG ALES+ L+
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  241  QAHIASGRLQPVFGDEMSLEVQAHFLVYPARHAARPEVRMFLDWIREE  288
            Q  + SG L  V  + +S  V AH LV+P  H++ P VR FL+W+  E
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESE  298

66) Alide2_2568 in NC_015422


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  182 bits (673),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 128/288 (45%), Positives = 186/288 (65%), Gaps = 1/288 (0%)

Query  2    IPPLSALQAFEAVARRRSFSLAATELHLTPSAISHQLAKLENLLGVRLFERSSRGVDLTP  61
            +PPL A+QAFE  AR  +++ AA  L+LTPSA+SHQLAKLE ++G +LF R++RGV LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  62   AGHSYLQRVGNALGAISTATDALRHGVQ-DSLYLHCSPSFASLWLMPRIARFAQRNPGIS  120
             G+ YL+ V+  L +++ AT+    +V  D L LH SPSF+ LWLMPR+  F   +P+I 
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  121  LVLSASHVHSDFQLGLVDLDIRYGLPTWPHLEVEPIFSEKVLPLASPEFIRRHALHTPQD  180
            + LS S    +F  + +D+DIR G P WP  EV  +  E    LASP ++ R +++++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  181  LLQVPLIQSMINVAQWPEWFARFEPAHRPERIALKFDRAMMSLDAAVQSLGVALESACLG  240
            LL+  LI S   + +WPE FA+   A+     +L FDR+ M+L+AA ++LG ALES+ L+
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLLA  250

Query  241  QAHIASGRLQPVFGDEMSLEVQAHFLVYPARHAARPEVRMFLDWIREE  288
            Q  + SG L  V  + +S  V AH LV+P  H++ P VR FL+W+  E
Sbjct  251  QKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESE  298

67) Hsero_0510 in NC_014323


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 124/295 (43%), Positives = 192/295 (66%), Gaps = 3/295 (1%)

Query  2    IPPLTSLMAFEAIARRKSFNLAAAELHLTPSAISHQVARLEKLLGLRLFERSTKGVELTP  61
            +PPL ++ AFE  AR  ++  AA  L+LTPSA+SHQ+A+LE ++G +LF R+++GV LTP
Sbjct  11   LPPLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTP  70

Query  62   AGQSYLNRVAGALGAINSATDDLRHGVE-NSLQIHSSPSFASLWLMPRIGRFTQRHPDIA  120
             G+ YL+ V+G L ++  AT+    +V  + L++HSSPSF+ LWLMPR+  F   HPDI 
Sbjct  71   VGEQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQ  130

Query  121  LGLSASPEISDFEIGQVDLDIRCGVPHWPDLEIEAVLSERVIPMASPDFLARHRIDTPDD  180
            + LS S E  +F  +++D+DIR G P+WP  E+ +V  E    +ASP +L R  ++++ D
Sbjct  131  INLSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTVRHETFAVLASPKLLERSPVNSAAD  190

Query  181  LVLAPLIQSRGSLLQWPEWFARYAPDLRPER-IALRFDRAMMSIEAAVQGLGVVFESDAF  239
            L+ + LI S ++LL+WPE FA+ +   RPE+  +L FDR+ M++EAA +GLG  +ES  +
Sbjct  191  LLNGELILSEATLLKWPELFAQHGLA-RPEKPYTLSFDRSYMTLEAASHGLGFALESTLL  249

Query  240  GAVALASGRLQPVFADGLALEITQHYAVCPARNKSRPEVMLFLQWLREESGAALA  294
            +   L SG L  V ++ L+  ++ H  V P  + S P V  FL+W+  E G ++ 
Sbjct  250  AQKYLQSGALLEVAPHLLSSPVAAHHLVFPKAHSSFPRVRRFLEWMESELGHGFV  304

68) AZKH_p0607 in NC_020548


> AY597275|40|G40|51102948|AAT96097.1|Pseudomonas_viridiflava_ME3.1b|-|35052..35969|-|-|lysR 
family transcriptional regulator
Length=305

 Score =  137 bits (502),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 119/294 (41%), Positives = 181/294 (62%), Gaps = 6/294 (2%)

Query  10   PLKAVQafeaaarlssfalaaDELFVTPSAVSHQIKLLEDQFGVQLFHRVHRAVVLTDSG  69
            PLKA+QAFE +AR++++A AA+ L +TPSAVSHQ+  LE  +G QLF R  R+V LT  G
Sbjct  13   PLKAIQAFEQTARFGNLARAAEVLDLTPSAVSHQLAKLEAMIGRQLFVRAARGVTLTPVG  72

Query  70   RRYAEEVSAAFARIDMATRELGRTAKSDILTVHSTPSFATQWLMPRLARFSSLNPDVDVR  129
             +Y  EVS+ +  + +AT   +     D L +HS+PSF+  WLMPRL  F   +PD+++ 
Sbjct  73   EQYLKEVSGLLHSLAVATERAASDVSLDCLRLHSSPSFGLLWLMPRLEAFRISHPDIQIN  132

Query  130  LNASTEVADLVAQAVDIDIRYGLRRLPPAGTMVLTFPPETIVPLCAPALLEGDNPICSPE  189
            L+ S E  ++  + +D+DIR G    P+     +    ET+  L +P LLE  +P+ S+ 
Sbjct  133  LSCSYESLHFSRDKIDVDIRHGRPNWPSYEVRTV--RHETFAVLASPKLLE-RSPVNSAA  189

Query  190  DLAHHTLIHSEVCLVSWRDWMRQHRKVKLDIARGLRFDRSFMAISAAVDGLGVCLESLLL  249
            DL +  LI SE  L+ W +   QH   + + +  L FDRS+M++ AA +GLG  LES LL
Sbjct  190  DLLNGELILSEATLLKWPELFAQHGLARPEKPYTLSFDRSYMTLEAASHGLGFALESTLL  249

Query  250  AQRELDSGRL--VAPFGLDGPKVQGYTFNLLKSRAELPKIRSFQDWLFDELERE  301
            AQ+ L+SG L  VAP  L +P V +  + + K+++ +P++R F +W+  EL + 
Sbjct  250  AQKYLQSGALLEVAPHLLSSP-VAAHHLVFPKAHSSFPRVRRFLEWMESELGHG  302