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PAthogenisity Island DataBase (PAI DB)

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Homologs of avrE gene of AY597278

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) avrE1
( NP_791204.1 )

type III effector protein AvrE1

NC_004578
(Pseudomonas syringae DC3000)

0.0

2) avrE1
( YP_273527.1 )

type III effector AvrE1

NC_005773
(Pseudomonas syringae 1448A)

0.0

3) AvrE1
( YP_234280.1 )

type III effector protein AvrE1

NC_007005
(Pseudomonas syringae B728a)

0.0

• Sequence Alignments

1) avrE1 in NC_004578


> AY597278|40|G40|51103072|AAT96218.1|Pseudomonas_viridiflava_PNA3.3a|+|35845..41067|avrE|-|AvrE
Length=1740

 Score = 1835 bits (6971),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1126/1795 (63%), Positives = 1461/1795 (82%), Gaps = 55/1795 (3%)

Query  1     MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLSSVGKRALKSVGKLFqk  60
             MQ+PSI+R T++ +QP     + +ATD++++A    Q++SHSL+S+GKR  K+VGK+F  
Sbjct  1     MQTPSINRTTANAVQPQTHTSSGTATDVRQHARPVSQQASHSLGSIGKRIAKNVGKMF--  58

Query  61    skapqqkaatpptakNVKTPPPASNVATPRNKARESGFSNSSPQNTHSAPKSILRNHPNQ  120
                              + P P+ ++                  + ++ + + LR+ +++
Sbjct  59    -----------------QKPKPPRQIV-----------------ENQPIAGAPLRS-ASK  83

Query  121   ASSSGAQTHEIHPEAAPRKNLRVRFDLPQDRLERSPSYLDSDNPMTDEEAVANATRQFRS  180
              +S ++ T+ +++  + R+   VRFDLP+D +E+S++  ++  P     AV +++   + 
Sbjct  84    KPSDDPLTQAVQSSVPVRN---VRFDLPEDPVEQSSGSTGPKGPKGKGKAVEDTSLT-QE  139

Query  181   PDSHLQGSDGTRISMLATDPDQpsssgskigdsdgpiPPREPMLWRSNGGRFELKDEKLV  240
             ++ HL++ D+ R   L +  +++SSSG+   ++  P++P+   L RS++GRF+   E LV
Sbjct  140   SEDHLKSDDDVRQWPLRSRQNEASSSGTTANETIEPFAPQPGSLSRSKAGRFDGPAEELV  199

Query  241   RNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILATPKQTYLAHQSKDGVHGHQLLQAN  300
             R ++ Q+++ LD+KGKPDFS+F+TPG+APLLD ILA  KQTYLA +S  G + H LL+++
Sbjct  200   RAGQQQSAVTLDTKGKPDFSAFQTPGMAPLLDQILANGKQTYLALHSEPGAENHLLLESS  259

Query  301   GHLLHLAQDDSSLAVIRSSNEALLIEGKKPPAVKMEREDGNIHIDTASGRKTQELPGKAH  360
             GHLLH++Q+D SLAVIRSS+++    ++K + V +E + G+  +   +   T +LPGKAH
Sbjct  260   GHLLHMTQNDVSLAVIRSSQQTPAAGAQKHADVGLETNAGQALVTVNGESATLQLPGKAH  319

Query  361   IAHITNVLLSHDGERMRVHEDRLYQFDPISTRWKIPEGLEDTAFNSLSTGGNGSVYAKSD  420
             +A+IT V  + DGE++RVHEDRLYQFD ++ RWKIPEG ED  FNSL+TGGNGS+YAKSD
Sbjct  320   LAQITGVHRNPDGEQLRVHEDRLYQFDTVALRWKIPEGNEDNVFNSLTTGGNGSIYAKSD  379

Query  421   DAVVDLSSPFMPHVEVEDLQSFSVAPDNRAALLSGKTTQAILLTDMSPVIGGLTPKKTKG  480
             D VVDLSS  MPH+EV +LQSFSVAPDN  A LSGK TQ++L++DMSP IGG  P+  K 
Sbjct  380   DVVVDLSSMEMPHLEVGELQSFSVAPDNTVACLSGKDTQTLLVADMSPGIGG--PRHQKT  437

Query  481   LELDGGKAQAAAVGLSGDKLFIADTQGRLYSADRSAFEGDDPKLKLMPEQANFQLEGVPL  540
             L LDGG+AQAA+VGLS+D LFIADTQGRLY+A R A+ +D P+L L P+Q ++ LEG P 
Sbjct  438   LKLDGGNAQAASVGLSADHLFIADTQGRLYTAPRDALKDDAPQLSLEPDQ-QYLLEGKPP  496

Query  541   GGHNRVTGFINGDDGGVHALIKNRQGETHSHALDEQSSKLQSGWNLTNALVLNNNRGLTM  600
             GGH++VTGFI+GDDG VHAL+KNRQG+ HSHALD Q S+L+SGWNLT+AL L+N  G+  
Sbjct  497   GGHDKVTGFISGDDGRVHALVKNRQGDVHSHALDPQRSRLESGWNLTEALALDNTTGMPT  556

Query  601   PPPPTAADRLNLDRAGLVGLSEGRIQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGG  660
              +PP +A RLNLDR+GLVGLS GR+QRWD+TP+CWKDAGIKDID+LQRGADSNAY LKGG
Sbjct  557   VAPPEPAARLNLDRSGLVGLSAGRLQRWDSTPQCWKDAGIKDIDQLQRGADSNAYALKGG  616

Query  661   KLHALKIAAEHPNMAFDRNTALAQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKRFVALD  720
             KLH L +++EHPN+ F+ +T+LAQTARSTKVE+G EIEGL++RVI AFAMVS+K+FVALD
Sbjct  617   KLHKLTVSPEHPNIVFGAHTSLAQTARSTKVELGTEIEGLEGRVITAFAMVSDKQFVALD  676

Query  721   DQNKLTAHSKDHKPVTLDIPGLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQSTKLG  780
             D++KLTAH KD  PV++   GL+GDIK+LSLDEKHNL ALTSTGGL+ ++++ WQ+T+L+
Sbjct  677   DEKKLTAHRKDGEPVSFTHEGLQGDIKTLSLDEKHNLYALTSTGGLFRMSRQDWQATRLS  736

Query  781   DQLRARWTPVALPGGQPVKALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQRPVEEN  840
             D ++A+W +V+ P+G+PVKALF+NDDN+LS Q+E+A +++LM+LK+G+W+ F QRPVEEN
Sbjct  737   DLMKAKWNAVPAPDGRPVKALFSNDDNMLSVQVEGAADQSLMRLKGGEWKTFTQRPVEEN  796

Query  841   GLNDVHSRITGSNKTWRIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYKNTAET  900
             GLND H RI  S+K WRIP TGLT++ + N  GR+G+EKS +A++ EFIRANI KNT ET
Sbjct  797   GLNDTHQRIKRSHKNWRIPLTGLTVKHETNIGGRGGMEKSHRAPAREFIRANIWKNTLET  856

Query  901   PRWMKNVGDHIQHRYQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKARITALE  960
             PRWMKNVG+HIQHRY+GR GL E+Y  E ++FKQLELIHE+ G  PA G+DLK+RI  L 
Sbjct  857   PRWMKNVGNHIQHRYHGRDGLMELYKKELIVFKQLELIHEAEGSVPAPGKDLKTRIEQLK  916

Query  961   AKLGPQGATLVKELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGELAKPSV  1020
              +LGP+G  LVK+LE+LR ELE+HS TAL++IGQS+G  KNL QQDG+LNQHGELAK++ 
Sbjct  917   -NLGPRGEKLVKDLESLRKELEDHSHTALIAIGQSFGTVKNLHQQDGVLNQHGELAKSTR  975

Query  1021  RMQFGKKLADLGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGLKLSHQ  1080
             R+++GKKL  LG KLNFKSSGH+L+KEL++AL+++APS+ +PT  LL TLK++G+K+SHQ
Sbjct  976   RLKLGKKLESLGKKLNFKSSGHNLIKELDNALSRIAPSPASPTAELLKTLKDNGVKISHQ  1035

Query  1081  KADIPLGQRRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKKLATLR  1140
             K+D+PLGQRRDA+E++GLSKARLALDLVTL+ LG LLDQ E L PQ+D+ +L++KLATLR
Sbjct  1036  KTDMPLGQRRDAGEEQGLSKARLALDLVTLNELGKLLDQAELLTPQNDLSALEQKLATLR  1095

Query  1141  DVTYGENPVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSKDQAEL  1200
             D TYGENP+KV+TDMGFTDN ALE++Y+SVKTFLK+FKK+DHAVSVNMRAATGSKDQ EL
Sbjct  1096  DTTYGENPIKVMTDMGFTDNAALETSYDSVKTFLKAFKKPDHAVSVNMRAATGSKDQIEL  1155

Query  1201  AGKFKSMLKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYILNAER  1260
             A+KFKSMLKQLEHGDDE+GL RSYG NLT+PF+ILAD+ATG WPTAGATGNRNYILNAER
Sbjct  1156  ADKFKSMLKQLEHGDDEIGLTRSYGGNLTSPFVILADNATGPWPTAGATGNRNYILNAER  1215

Query  1261  CEGGVTLYLISEgagnvsggfgagKDYWPGFFDANNPARSVDVGNNRTLTPNFRLGVDVT  1320
              +GG+TLYLISE+AGNVSGG G+GKDYWP+  D NNPARSVD+GN+R + P FRLG ++T
Sbjct  1216  TDGGITLYLISEAAGNVSGGVGGGKDYWPAWVDENNPARSVDIGNDRRMNPGFRLGGELT  1275

Query  1321  ATVAASQRAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFDLTAGG  1380
             AT A+SQR GV+FNV+DE+IDAFVDDLFEG+LNPLQV+KKAVDHE+Y+ARRFNFD+TAGG
Sbjct  1276  ATAAGSQRNGVIFNVADENIDAFVDDLFEGKLNPLQVMKKAVDHETYQARRFNFDITAGG  1335

Query  1381  TADIRAGINLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDKTELKE  1440
             TA++R G++++E+       +SD++SAV R G  AN+TVNLM+YTDYSLTQKN+KTEL+E
Sbjct  1336  TAEFRLGFDISEQ-------DSDPLSAVARLGVLANVTVNLMSYTDYSLTQKNEKTELRE  1388

Query  1441  GGKNRPRFLNNVTAGGQLRAQIGGSHtaptgtpasapgptpasqtaaNNLGGALNFSVEN  1500
             GGKNRPR LN++  G Q R+Q++G+HT PT+TPASAPGPTPA+Q+AANN+G     SVE+
Sbjct  1389  GGKNRPRWLNSLMMGLQGRTQLSGTHTNPTSTPASAPGPTPATQSAANNVGINATVSVED  1448

Query  1501  RTVKRIKFRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARYTGKKPDEV  1560
             RTVKR+KFRYNVA P+T+ +L KLS +LG +F DN+TKA LAELA  L    +G  PD  
Sbjct  1449  RTVKRVKFRYNVATPMTAKSLDKLSASLGKTFPDNATKASLAELAK-LTEAASGEAPDAA  1507

Query  1561  IQAQLDGLEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDNARFETSKTNL  1620
             ++A+LDGL  LFAD  +  +ND+QYKALRDLKRA V+H +S +KHSV+DNARFETSKTNL
Sbjct  1508  VKARLDGLKALFADKTS--QNDQQYKALRDLKRAVVQHESSLKKHSVLDNARFETSKTNL  1565

Query  1621  SGLSSESILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGSIGTLARVRLEPK  1680
             SGL SES+LTKIMSSVR ASAPGNA+RVAEFMR+DPKLRAMLKEM++S GTLARVRLEPK
Sbjct  1566  SGLDSESMLTKIMSSVRTASAPGNAARVAEFMRKDPKLRAMLKEMQASDGTLARVRLEPK  1625

Query  1681  DSLVDKIDEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAENFTSPTPLVSYNSG  1740
             DSL+D+IDEGSLNG MTQ +LS++LEDRN+MRIKRLVVFHTATQAENFT PTPL SYNSG
Sbjct  1626  DSLIDRIDEGSLNGDMTQKELSGLLEDRNQMRIKRLVVFHTATQAENFTLPTPLASYNSG  1685

Query  1741  ANVSVTKTLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAGDLKKEGFELKS  1795
             ++++VTK LGR+NF+YG DQD PIGYTFDGELSRPS SL+EAA+ LKK+GFE+K+
Sbjct  1686  TSLNVTKVLGRVNFIYGEDQDTPIGYTFDGELSRPSQSLNEAADLLKKQGFEFKT  1740

2) avrE1 in NC_005773


> AY597278|40|G40|51103072|AAT96218.1|Pseudomonas_viridiflava_PNA3.3a|+|35845..41067|avrE|-|AvrE
Length=1740

 Score = 1813 bits (6888),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1119/1755 (64%), Positives = 1426/1755 (82%), Gaps = 56/1755 (3%)

Query  1     MHSSSIHRNTGCIIQppapantnaatDLQQKIEQPKQRSSHSLSSVGKRALKNVSKLFQK  60
             M+++SI+R T+  +QP + +++ +ATD++Q      Q++SHSL+S+GKR  KNV+K+FQK
Sbjct  1     MQTPSINRTTANAVQPQTHTSSGTATDVRQHARPVSQQASHSLGSIGKRIAKNVGKMFQK  60

Query  61    SKAPQQKAATPP--------------------------TVKNVK---PSQPTPNAKTAK-  90
             +K+P+Q     P                           V+NV+   P +P  ++  +  
Sbjct  61    PKPPRQIVENQPIAGAPLRSASKKPSDDPLTQAVQSSVPVRNVRFDLPEDPVEQSSGSTG  120

Query  91    -----------DKAPVsqlssnslddlddTRQPVTRAGHSGASTCGTKAQDPDEPATLQS  139
                        + ++++Q S + L   DD RQ   R+ ++ AS+ GT A++  EP + Q+
Sbjct  121   PKGPKGKGKAVEDTSLTQESEDHLKSDDDVRQWPLRSRQNEASSSGTTANETIEPFAPQP  180

Query  140   SRQSMMTRSNGGRFELKDEKLVRNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILATP  199
             +    ++RS++GRF+   E LVR ++ Q+++ LD+KGKPDFS+F+TPG+APLLD ILA  
Sbjct  181   GS---LSRSKAGRFDGPAEELVRAGQQQSAVTLDTKGKPDFSAFQTPGMAPLLDQILANG  237

Query  200   RQTYLAHQSKDGVHGHQLLQANGHLLHLAQDDSSLALIRSSKEALHIEGKKPPAVKLERE  259
             +QTYLA +S  G + H LL+++GHLLH++Q+D SLA+IRSS+++    ++K + V LE +
Sbjct  238   KQTYLALHSEPGAENHLLLESSGHLLHMTQNDVSLAVIRSSQQTPAAGAQKHADVGLETN  297

Query  260   DGNIHIDTASGRKTQELPGKAHIAHITGVLLRHDGERMRVHEDRLYQFDPLSARWKAPEG  319
              G+  +   +   T +LPGKAH+A+ITGV    DGE++RVHEDRLYQFD ++ RWK PEG
Sbjct  298   AGQALVTVNGESATLQLPGKAHLAQITGVHRNPDGEQLRVHEDRLYQFDTVALRWKIPEG  357

Query  320   TEDIAFNSLATGGKGSVYAKSDDVVVDLTSPFMPHIEVKDLQSFSVAPDNRAALLSGKET  379
              ED  FNSL+TGG+GS+YAKSDDVVVDL+S  MPH+EV +LQSFSVAPDN  A LSGK+T
Sbjct  358   NEDNVFNSLTTGGNGSIYAKSDDVVVDLSSMEMPHLEVGELQSFSVAPDNTVACLSGKDT  417

Query  380   QAILLTDMSPVIGDLTEKKTKALELDGGKAQAAAVGLSDNKLFIADTQGRLYSADRSAFE  439
             Q++L++DMSP IG+   +  K+L LDGG+AQAA+VGLS + LFIADTQGRLY+A R A+ 
Sbjct  418   QTLLVADMSPGIGG--PRHQKTLKLDGGNAQAASVGLSADHLFIADTQGRLYTAPRDALK  475

Query  440   SNDPQLKLMPDQANFQLAGLPLGGHDSVTGFINGDDGRVHALIKNRQGEIHSHALNEQDS  499
              + PQL L PDQ ++ L G P GGHD VTGFI+GDDGRVHAL+KNRQG++HSHAL+ Q S
Sbjct  476   DDAPQLSLEPDQ-QYLLEGKPPGGHDKVTGFISGDDGRVHALVKNRQGDVHSHALDPQRS  534

Query  500   KLESGWNLTNALVLSNNRGLTMPPAPTAADRLNLDRAGLVGLSEGRIQRWDATPECWKDA  559
             +LESGWNLT+AL L N  G+   ++P +A RLNLDR+GLVGLS GR+QRWD+TP+CWKDA
Sbjct  535   RLESGWNLTEALALDNTTGMPTVAPPEPAARLNLDRSGLVGLSAGRLQRWDSTPQCWKDA  594

Query  560   GIKDIDRLQRGADSNAYVLKGGKLHALKVTPEHPNMAFDHNTALAQTARSTTVEMGKEIE  619
             GIKDID+LQRGADSNAY LKGGKLH L V+PEHPN+ F+ +T+LAQTARST VE+G EIE
Sbjct  595   GIKDIDQLQRGADSNAYALKGGKLHKLTVSPEHPNIVFGAHTSLAQTARSTKVELGTEIE  654

Query  620   GLDDRVITAFAMVSNKRFVALDDQNKLTAHSKDHKPVTLDIPGLEGDIKSLALDEKHNLH  679
             GL++RVITAFAMVS+K+FVALDD++KLTAH KD  PV++   GL+GDIK+L+LDEKHNL 
Sbjct  655   GLEGRVITAFAMVSDKQFVALDDEKKLTAHRKDGEPVSFTHEGLQGDIKTLSLDEKHNLY  714

Query  680   ALTSTGGLYCLPREAWQSTKLGDQMRARWTPVALPGGQPVKALFANDDNVLSAQIEDAEG  739
             ALTSTGGL+ ++R+ WQ+T+L+D M+A+W +V+ P+G+PVKALF+NDDN+LS Q+E+A +
Sbjct  715   ALTSTGGLFRMSRQDWQATRLSDLMKAKWNAVPAPDGRPVKALFSNDDNMLSVQVEGAAD  774

Query  740   QGLMRLSAGKWQAFEQRPVEENGLNDVHSRITGSNKTWRIPKTGLTLRMDINAFGRSGVE  799
             Q+LMRL +G W++F QRPVEENGLND H RI  S+K WRIP TGLT++ + N  GR+G+E
Sbjct  775   QSLMRLKGGEWKTFTQRPVEENGLNDTHQRIKRSHKNWRIPLTGLTVKHETNIGGRGGME  834

Query  800   KSKKASTREFMRANVYKNTAEVPRWMKNVGNNIQHRHHGRLGLNEVYETESMLFKQLELI  859
             KS +A++REF+RAN+ KNT E PRWMKNVGN+IQHR HGR GL E+Y  E ++FKQLELI
Sbjct  835   KSHRAPAREFIRANIWKNTLETPRWMKNVGNHIQHRYHGRDGLMELYKKELIVFKQLELI  894

Query  860   HESGGRPPAPGKDLKARIAALESKLGPQGATLVKELETLREELENHSYTALMSIGQSYGK  919
             HE+ G  PAPGKDLK+RI  L  +LGP+G  LVK+LE+LR ELE+HS TAL++IGQS+G 
Sbjct  895   HEAEGSVPAPGKDLKTRIEQL-KNLGPRGEKLVKDLESLRKELEDHSHTALIAIGQSFGT  953

Query  920   VKNLRQQDGILNQHGELAKPSVRTQFGKKLAELGTKLNFKSSGHDLVKELQDALTQVAPS  979
             VKNL+QQDG+LNQHGELAK++ R ++GKKL  LG KLNFKSSGH+L+KEL++AL+++APS
Sbjct  954   VKNLHQQDGVLNQHGELAKSTRRLKLGKKLESLGKKLNFKSSGHNLIKELDNALSRIAPS  1013

Query  980   AENPTKKLLGTLKYQGLKLSHQKADVPLGQRRDASEEHGLSKARLALDLVTLKSLGALLD  1039
             + +PT  LL TLK +G+K+SHQK+D+PLGQRRDA+EE+GLSKARLALDLVTL+ LG LLD
Sbjct  1014  PASPTAELLKTLKDNGVKISHQKTDMPLGQRRDAGEEQGLSKARLALDLVTLNELGKLLD  1073

Query  1040  EVEQLPPQADIDPLQNKLARLRDVTYGENPVKVVTDMGFTDNKALESGYEAVKTFLKSFK  1099
             + E L PQ D+ +L++KLA LRD TYGENP+KV+TDMGFTDN ALE++Y++VKTFLK+FK
Sbjct  1074  QAELLTPQNDLSALEQKLATLRDTTYGENPIKVMTDMGFTDNAALETSYDSVKTFLKAFK  1133

Query  1100  KADHAVSVNMRAATGSKDQAELAGKFKSMLKQLEHGDDEIRLQRSYGLNLTTPFIILADN  1159
             K+DHAVSVNMRAATGSKDQ ELA+KFKSMLKQLEHGDDEI L RSYG NLT+PF+ILADN
Sbjct  1134  KPDHAVSVNMRAATGSKDQIELADKFKSMLKQLEHGDDEIGLTRSYGGNLTSPFVILADN  1193

Query  1160  ATGLWPTAGTTGNRNYILNAERCEGGVTLYLISEgagnvsggfgagKDYWPGFFDENHPA  1219
             ATG WPTAG+TGNRNYILNAER +GG+TLYLISE+AGNVSGG G+GKDYWP+  DEN+PA
Sbjct  1194  ATGPWPTAGATGNRNYILNAERTDGGITLYLISEAAGNVSGGVGGGKDYWPAWVDENNPA  1253

Query  1220  RSVDVGNNRTLTPNFRLGVDVTATVAASQRAGVVFNVPDEDIDAFIDDLFEGKLNPLQVL  1279
             RSVD+GN+R + P FRLG ++TAT A+SQR GV+FNV+DE+IDAF+DDLFEGKLNPLQV+
Sbjct  1254  RSVDIGNDRRMNPGFRLGGELTATAAGSQRNGVIFNVADENIDAFVDDLFEGKLNPLQVM  1313

Query  1280  KKAVDHETYQARRFNFDLTAGGTADLRAGINLTEDRDPDADPNSDSFSAVVRGGFAANIT  1339
             KKAVDHETYQARRFNFD+TAGGTA++R G++++E+       +SD++SAV R G  AN+T
Sbjct  1314  KKAVDHETYQARRFNFDITAGGTAEFRLGFDISEQ-------DSDPLSAVARLGVLANVT  1366

Query  1340  VNLMTYTDNSLTQKNDKTKLREGGKNRPRFLNNATLGGQLRGQIggtrtaptgtpasapg  1399
             VNLM+YTD SLTQKN+KT LREGGKNRPR LN+  +G Q R Q++GT+T PT+TPASAPG
Sbjct  1367  VNLMSYTDYSLTQKNEKTELREGGKNRPRWLNSLMMGLQGRTQLSGTHTNPTSTPASAPG  1426

Query  1400  ptlaSQSAANNLGVAVNFSVENRTVKRVKFRYNVAKPITTEGLGKLSKSLGEAFKDSTTK  1459
             PT A+QSAANN+G+    SVE+RTVKRVKFRYNVA P+T+ +L+KLS SLG +F D++TK
Sbjct  1427  PTPATQSAANNVGINATVSVEDRTVKRVKFRYNVATPMTAKSLDKLSASLGKTFPDNATK  1486

Query  1460  AKLAELADPLNARYAGKKPDEVIQAHLDGLEELFADTQWQNDKQYKALRGLKRGAVEHRA  1519
             A LAELA  L    +G  PD  ++A+LDGL  LFAD   QND+QYKALR+LKR+ V+H +
Sbjct  1487  ASLAELAK-LTEAASGEAPDAAVKARLDGLKALFADKTSQNDQQYKALRDLKRAVVQHES  1545

Query  1520  SVNKHSVMDNARFETSKTNLSGLSSESILTKIMGSVREASAPGNAARVAEFMRQDPKLRA  1579
             S++KHSV+DNARFETSKTNLSGL SES+LTKIM+SVR ASAPGNAARVAEFMR+DPKLRA
Sbjct  1546  SLKKHSVLDNARFETSKTNLSGLDSESMLTKIMSSVRTASAPGNAARVAEFMRKDPKLRA  1605

Query  1580  MLKDMEGSIGTLARVRLEPKDSLVDKIDEGSLDGTMTQSDLSALLRDRNQMRIKRLVVFH  1639
             MLK+M++S GTLARVRLEPKDSL+D+IDEGSL+G MTQ +LS+LL DRNQMRIKRLVVFH
Sbjct  1606  MLKEMQASDGTLARVRLEPKDSLIDRIDEGSLNGDMTQKELSGLLEDRNQMRIKRLVVFH  1665

Query  1640  TATQAENFTSPTPLVSYNSGANMSVTKTLGRINFIYGADQDKPIGYTFDGELSRPSASLK  1699
             TATQAENFT PTPL SYNSG++++VTK LGR+NFIYG DQD PIGYTFDGELSRPS SL+
Sbjct  1666  TATQAENFTLPTPLASYNSGTSLNVTKVLGRVNFIYGEDQDTPIGYTFDGELSRPSQSLN  1725

Query  1700  EAASKLKQEGFELKS  1714
             EAA  LK++GFE+K+
Sbjct  1726  EAADLLKKQGFEFKT  1740

3) AvrE1 in NC_007005


> AY597278|40|G40|51103072|AAT96218.1|Pseudomonas_viridiflava_PNA3.3a|+|35845..41067|avrE|-|AvrE
Length=1740

 Score = 1786 bits (6784),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1089/1787 (61%), Positives = 1435/1787 (81%), Gaps = 48/1787 (2%)

Query  1     MQAPTVNRNTGNVIAPEATARADNPSNIRQQTEQPTQRSSHSLGSMGKRLLKSVGKVFQK  60
             MQ+P++NR T+N + P++ + ++ ++++RQ++   +Q++SHSLGS+GKR+ K+VGK+FQK
Sbjct  1     MQTPSINRTTANAVQPQTHTSSGTATDVRQHARPVSQQASHSLGSIGKRIAKNVGKMFQK  60

Query  61    SRAPRqsaarppstqppssspprssREAGRNTSRDTRLpdnppprndpppKSILRTRANT  120
             +++PR             + +  + R A+++ S D             + +S +  R   
Sbjct  61    PKPPR-------QIVENQPIAGAPLRSASKKPSDDP---------LTQAVQSSVPVRNVR  104

Query  121   SGTTKHEIEQGSTRADTAPRNNRRVTFNLPQDQLTRSASEQLAAEPMTDEEAVASAMRER  180
              +   + +EQ+S  + T+P+  +     + +  LT+ + ++L     +D++    ++R R
Sbjct  105   FDLPEDPVEQSS--GSTGPKGPKGKGKAVEDTSLTQESEDHL----KSDDDVRQWPLRSR  158

Query  181   RNPGGRLQGPDGTRQSMQPVDPNTASSSGTQADDPDGPLARRNtglesstggsselrseQ  240
             +N ++   +   + ++++P  P+ +S S ++A+  DGP                   +E+
Sbjct  159   QNEASS--SGTTANETIEPFAPQPGSLSRSKAGRFDGP-------------------AEE  197

Query  241   LIRDTRPQATIRLSADGKPDFSSFKTPGMAALLNDILAKPGQTYLAQQSEQGVQDHQLLQ  300
             L+R  + Q+++ L + GKPDFS+F+TPGMA+LL++ILA+  QTYLA +SE G ++H LL+
Sbjct  198   LVRAGQQQSAVTLDTKGKPDFSAFQTPGMAPLLDQILANGKQTYLALHSEPGAENHLLLE  257

Query  301   ANGHLLHLAQGDSSLAVIRSSEPTLPVAGGKPPPVNMQREENHIHLDTLDGRRSQELPGK  360
             ++GHLLH++Q D SLAVIRSS+ T + ++ K + V ++ +  +  +   +   + +LPGK
Sbjct  258   SSGHLLHMTQNDVSLAVIRSSQQTPAAGAQKHADVGLETNAGQALVTVNGESATLQLPGK  317

Query  361   AHIAHLTDVHQTTNGDRLRVHEDRLYQFEPLAARWKPVDEIEDIAFNRLITGGNGSVYAK  420
             AH+A++T+VH+  +G++LRVHEDRLYQF+ +A RWK  +  ED  FN L TGGNGS+YAK
Sbjct  318   AHLAQITGVHRNPDGEQLRVHEDRLYQFDTVALRWKIPEGNEDNVFNSLTTGGNGSIYAK  377

Query  421   SDDVVVDLSSPFMPHADFNDLKSFSVAPDDTAALLSGSDVQTVLLTDMSPVIGGLTPKKT  480
             SDDVVVDLSS  MPH +  +L+SFSVAPD+T A LSG D QT+L++DMSP IGG  P+  
Sbjct  378   SDDVVVDLSSMEMPHLEVGELQSFSVAPDNTVACLSGKDTQTLLVADMSPGIGG--PRHQ  435

Query  481   KTLELDGGQAQAAEVALSNDRLFIADTQGRLYSTDRSAFESNEPTLRLMPERAGYRLDDQ  540
             KTL LDGG+AQAA V+LS D+LFIADTQGRLY++ R A+  + P L L P++  Y L+++
Sbjct  436   KTLKLDGGNAQAASVGLSADHLFIADTQGRLYTAPRDALKDDAPQLSLEPDQQ-YLLEGK  494

Query  541   PMGGHNSVSGFISGDDGRVHALIRNRQGEVHSHALDEQGAKLESGWNLTNALVLDNTRGL  600
             P GGH+ V+GFISGDDGRVHAL++NRQG+VHSHALD Q ++LESGWNLT+AL LDNT G+
Sbjct  495   PPGGHDKVTGFISGDDGRVHALVKNRQGDVHSHALDPQRSRLESGWNLTEALALDNTTGM  554

Query  601   TVMPAPVGADRLHLDRAGLVGLNAGRIQRWDATPQCWKDAGIKDVDRLQRGADSNAYVLK  660
               +++P  A RL+LDR+GLVGL+AGR+QRWD+TPQCWKDAGIKD+D+LQRGADSNAY LK
Sbjct  555   PTVAPPEPAARLNLDRSGLVGLSAGRLQRWDSTPQCWKDAGIKDIDQLQRGADSNAYALK  614

Query  661   GGKLLRLDVAPKHPNVAFDHNTALAQIARSTKVAMGKEIAGLENRVVTAFAMVSDKRFVA  720
             GGKL +L V+P HPN+ F+ +T+LAQ ARSTKV +G EI GLE RV+TAFAMVSDK+FVA
Sbjct  615   GGKLHKLTVSPEHPNIVFGAHTSLAQTARSTKVELGTEIEGLEGRVITAFAMVSDKQFVA  674

Query  721   LDDQNRLTAHSKDHKPIDLDTSAIDGDIKDLALDEKHNLYTLSSTGKLYCMPREAWQATR  780
             LDD+++LTAH KD  P+ +   +++GDIK L+LDEKHNLY+L+STG L+ M+R+ WQATR
Sbjct  675   LDDEKKLTAHRKDGEPVSFTHEGLQGDIKTLSLDEKHNLYALTSTGGLFRMSRQDWQATR  734

Query  781   FGGQLAAKWTPLAAPDGQPVKALYSNDDNRLSVQVEDAAGQGLMQLKEGQWQAFEQRPVE  840
             +++ + AKW +++APDG+PVKAL+SNDDN LSVQVE+AA+Q+LM+LK G+W++F QRPVE
Sbjct  735   LSDLMKAKWNAVPAPDGRPVKALFSNDDNMLSVQVEGAADQSLMRLKGGEWKTFTQRPVE  794

Query  841   KNGLNDVYNRITRAHKTWRIPGTGLTANLDINAFGRSGMEKSNRPTASEAIRANVYKHTL  900
              NGLND  +RI R+HK WRIP TGLT + + N  GR+GMEKS+R+ A E IRAN+ K+TL
Sbjct  795   ENGLNDTHQRIKRSHKNWRIPLTGLTVKHETNIGGRGGMEKSHRAPAREFIRANIWKNTL  854

Query  901   EPPRWMKNVGNNIQHRYHGREGLKELYKKELIAFKQLELVHEAAGAPPTPGNDLKARIAR  960
             E PRWMKNVGN+IQHRYHGR+GL ELYKKELI FKQLEL+HEA G+ P+PG+DLK+RI +
Sbjct  855   ETPRWMKNVGNHIQHRYHGRDGLMELYKKELIVFKQLELIHEAEGSVPAPGKDLKTRIEQ  914

Query  961   L-QLGPEGAELAKELEVFRDELEKHARTALENIGKDYGKLKNLKQNDGVLNQHSALAKPS  1019
             L +LGP G  L K+LE +R ELE H++TAL  IG+ +G +KNL Q+DGVLNQH+ LAK++
Sbjct  915   LKNLGPRGEKLVKDLESLRKELEDHSHTALIAIGQSFGTVKNLHQQDGVLNQHGELAKST  974

Query  1020  KRTQLGKKLAELGSILNFKSSGHDFVKELDDALTRIAPSAENPTARTLKLLKDNGVKLSH  1079
             +R +LGKKL  LG  LNFKSSGH+++KELD+AL+RIAPS+ +PTA  LK LKDNGVK+SH
Sbjct  975   RRLKLGKKLESLGKKLNFKSSGHNLIKELDNALSRIAPSPASPTAELLKTLKDNGVKISH  1034

Query  1080  TKTDIGLGQRRDANEDHGLSKARLALDLVTLNDLGALIGKVELLARSSDLPRLQAELTSL  1139
              KTD+ LGQRRDA E++GLSKARLALDLVTLN+LG L+++ ELL+  +DL+ L+  L++L
Sbjct  1035  QKTDMPLGQRRDAGEEQGLSKARLALDLVTLNELGKLLDQAELLTPQNDLSALEQKLATL  1094

Query  1140  RDVTYGENPVKQVTDMGFTDNAALEGAYDAVKAFSNALKKSDHAVSVNMRAATGSQNQSE  1199
             RD TYGENP+K +TDMGFTDNAALE +YD+VK+F +A+KK+DHAVSVNMRAATGS++Q E
Sbjct  1095  RDTTYGENPIKVMTDMGFTDNAALETSYDSVKTFLKAFKKPDHAVSVNMRAATGSKDQIE  1154

Query  1200  LADTLKAMLKNLEHGDDEIGVQRSYGLNLTSPWVVLADKSTGPWPNAGATGNRNYLFSAE  1259
             LAD +K+MLK+LEHGDDEIG+ RSYG NLTSP V+LAD++TGPWP AGATGNRNY+++AE
Sbjct  1155  LADKFKSMLKQLEHGDDEIGLTRSYGGNLTSPFVILADNATGPWPTAGATGNRNYILNAE  1214

Query  1260  RCEGGVTLYLTREaagnvnggvgggKDYWPGFFDENHPARSVDIGNNRKMTPNFRLGADV  1319
             R +GG+TLYL  EAAGNV+GGVGGGKDYWP+  DEN+PARSVDIGN+R+M P FRLG+++
Sbjct  1215  RTDGGITLYLISEAAGNVSGGVGGGKDYWPAWVDENNPARSVDIGNDRRMNPGFRLGGEL  1274

Query  1320  TATAAASQRAGVIFNVADDEIDGFVDDLFEGKLNPLQLLNKVKDHETYEARRFNFDITTG  1379
             TATAA+SQR GVIFNVAD++ID+FVDDLFEGKLNPLQ+++K  DHETY+ARRFNFDIT+G
Sbjct  1275  TATAAGSQRNGVIFNVADENIDAFVDDLFEGKLNPLQVMKKAVDHETYQARRFNFDITAG  1334

Query  1380  FSADMRVGFGLSEADSAPLSAVARLGVAANVTVNLLSYTDYSLTQKNDKTELRDGGKNRP  1439
              +A+ R+GF++SE DS PLSAVARLGV ANVTVNL+SYTDYSLTQKN+KTELR+GGKNRP
Sbjct  1335  GTAEFRLGFDISEQDSDPLSAVARLGVLANVTVNLMSYTDYSLTQKNEKTELREGGKNRP  1394

Query  1440  RFFNSLIFGGQARGQISGthsnstatptsaagptpatqsaaNNLGVAANVTIDDKTVKRV  1499
             R +NSL+ G Q+R Q+SGTH+N+T+TP+SA+GPTPATQSAANN+G+ A V+++D+TVKRV
Sbjct  1395  RWLNSLMMGLQGRTQLSGTHTNPTSTPASAPGPTPATQSAANNVGINATVSVEDRTVKRV  1454

Query  1500  KFRFNVATPMTTESLDKLSKSLGAAFKDKATTARLAELQNPLNALYVDMNPEQAIQARLD  1559
             KFR+NVATPMT+ SLDKLS SLG +F D+AT A LAEL + L     +  P+ A++ARLD
Sbjct  1455  KFRYNVATPMTAKSLDKLSASLGKTFPDNATKASLAELAK-LTEAASGEAPDAAVKARLD  1513

Query  1560  GLKALFAERPSQNDTQYKALRDLKRAGVQHEASINNHSVLDNARFETSKTSLSGLSKESI  1619
             GLKALFA++ SQND QYKALRDLKRA VQHE+S+++HSVLDNARFETSKT+LSGL  ES+
Sbjct  1514  GLKALFADKTSQNDQQYKALRDLKRAVVQHESSLKKHSVLDNARFETSKTNLSGLDSESM  1573

Query  1620  LTRIMGSLRDASAPGNAARVAEYMRQDPTLSAMVKQLENSQGTLARIRLEPKDSLIDEID  1679
             LT+IM+S+R ASAPGNAARVAE+MR+DP L AM+K+++ S+GTLAR+RLEPKDSLID ID
Sbjct  1574  LTKIMSSVRTASAPGNAARVAEFMRKDPKLRAMLKEMQASDGTLARVRLEPKDSLIDRID  1633

Query  1680  EGSRRGTLTQTELSGLLENRNNMRIKRLVVFHTPRQTENFTSPTPLISYNSGASLSVNKP  1739
             EGS  G +TQ ELSGLLE+RN+MRIKRLVVFHT+ Q+ENFT PTPL SYNSG+SL+V K 
Sbjct  1634  EGSLNGDMTQKELSGLLEDRNQMRIKRLVVFHTATQAENFTLPTPLASYNSGTSLNVTKV  1693

Query  1740  LGRINFIYGEDQDKPIGYTFDGELSRPSASLKEAAGELKLSGFEVKS  1786
             LGR+NFIYGEDQD PIGYTFDGELSRPS SL+EAA+ LK  GFE K+
Sbjct  1694  LGRVNFIYGEDQDTPIGYTFDGELSRPSQSLNEAADLLKKQGFEFKT  1740