Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of STY0328 gene of NC_003198_P1

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) STMMW_03061
( - )

NC_016854
(Salmonella enterica D23580)

e-131

92.4

2) SL1344_0292
( - )

NC_016810
(Salmonella enterica SL1344)

e-131

92.4

3) SBOV02401
( - )

hypothetical protein, pseudogene

NC_022241
(Salmonella enterica 3114)

e-116

92.4

• Sequence Alignments

1) STMMW_03061 in NC_016854


>NC_003198_P1|40|G37|16759287|NP_454904.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|37760..38065|STY0328|-|hypothetical 
          Length = 306

 Score = 465 bits (1200), Expect = e-131
 Identities = 256/278 (92%)
 Strand = Plus / Plus

Query: 1   atggctcgattatgcgggatacttacatactcacgcgttgagagactttcagttcgtttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggctcgattatgcgggatacttacatactcacgcgttgagagactttcagttcgtttg 60

Query: 61  tacggtgaatggatgccgcaggcggggtttattaacgggatgcccgtcaaggtgcgggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacggtgaatggatgccgcaggcggggtttattaacgggatgcccgtcaaggtgcgggta 120

Query: 121 atgagggattgcatcgtgatcacgccgcagcatacccacggactctttggctgtattgaa 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 121 atgagggattgcatcgtgatcacgccgcagcatacccgcggactctttgtctgtattgaa 180

Query: 181 gggatgggcgtaacccgcattaataaacggagtgcagaacagtggttaaaaacatttcc- 239
           ||||||||||| ||    |||||| ||  ||  |   ||  |||| ||||||| ||||| 
Sbjct: 181 gggatgggcgtgacttttattaatcaaaagaaggtgaaagcgtggctaaaaacctttccg 240

Query: 240 ggggcgctgaacaataccggagatattccggtgattaa 277
           |||||||||||| ||||||| |||||||||||||||||
Sbjct: 241 ggggcgctgaacgataccggggatattccggtgattaa 278

2) SL1344_0292 in NC_016810


>NC_003198_P1|40|G37|16759287|NP_454904.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|37760..38065|STY0328|-|hypothetical 
          Length = 306

 Score = 465 bits (1200), Expect = e-131
 Identities = 256/278 (92%)
 Strand = Plus / Plus

Query: 1   atggctcgattatgcgggatacttacatactcacgcgttgagagactttcagttcgtttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggctcgattatgcgggatacttacatactcacgcgttgagagactttcagttcgtttg 60

Query: 61  tacggtgaatggatgccgcaggcggggtttattaacgggatgcccgtcaaggtgcgggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacggtgaatggatgccgcaggcggggtttattaacgggatgcccgtcaaggtgcgggta 120

Query: 121 atgagggattgcatcgtgatcacgccgcagcatacccacggactctttggctgtattgaa 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 121 atgagggattgcatcgtgatcacgccgcagcatacccgcggactctttgtctgtattgaa 180

Query: 181 gggatgggcgtaacccgcattaataaacggagtgcagaacagtggttaaaaacatttcc- 239
           ||||||||||| ||    |||||| ||  ||  |   ||  |||| ||||||| ||||| 
Sbjct: 181 gggatgggcgtgacttttattaatcaaaagaaggtgaaagcgtggctaaaaacctttccg 240

Query: 240 ggggcgctgaacaataccggagatattccggtgattaa 277
           |||||||||||| ||||||| |||||||||||||||||
Sbjct: 241 ggggcgctgaacgataccggggatattccggtgattaa 278

3) SBOV02401 in NC_022241


>NC_003198_P1|40|G37|16759287|NP_454904.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|37760..38065|STY0328|-|hypothetical 
          Length = 306

 Score = 416 bits (1073), Expect = e-116
 Identities = 230/250 (92%)
 Strand = Plus / Plus

Query: 1   atggctcgattatgcgggatacttacatactcacgcattgagagactttcagttcgtttg 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1   atggctcgattatgcgggatacttacatactcacgcgttgagagactttcagttcgtttg 60

Query: 61  tacggtgaatggatgccgcaggcggggtttattaacgggatgcccgtcaaggtgcgggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacggtgaatggatgccgcaggcggggtttattaacgggatgcccgtcaaggtgcgggta 120

Query: 121 atgagggattgcatcgtgatcacgccgcagcatacccgcggactctttggctgtattgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 atgagggattgcatcgtgatcacgccgcagcatacccgcggactctttgtctgtattgaa 180

Query: 181 gggatgggcgtaacccgcattaataaacggaatgcagaacaatggttaaaaacatttccg 240
           ||||||||||| ||    |||||| ||  ||| |   ||   ||| ||||||| ||||||
Sbjct: 181 gggatgggcgtgacttttattaatcaaaagaaggtgaaagcgtggctaaaaacctttccg 240

Query: 241 ggg-cgctga 249
           ||| ||||||
Sbjct: 241 ggggcgctga 250