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Homologs of ssaQ gene of NC_006905_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ssaQ
( YP_216426.1 )

type III secretion system protein

NC_006905
(Salmonella enterica SC-B67)

1e-143

100

2) SEEH1578_16325
( YP_008247324.1 )

type III secretion system protein SsaQ

NC_021810
(Salmonella enterica 41578)

2e-143

3) SU5_02034
( YP_006087668.1 )

Type III secretion inner membrane protein

NC_017623
(Salmonella enterica B182)

2e-143

4) SEEB0189_12445
( YP_008308804.1 )

type III secretion system protein SsaQ

NC_021844
(Salmonella enterica CFSAN000189)

2e-143

5) CFSAN002069_01910
( YP_008249242.1 )

type III secretion system protein SsaQ

NC_021812
(Salmonella enterica CFSAN002069)

2e-143

6) ssaQ
( YP_002637869.1 )

type III secretion system protein

NC_012125
(Salmonella enterica RKS4594)

2e-143

7) epaO
( YP_002045421.1 )

type III secretion system protein

NC_011083
(Salmonella enterica SL476)

2e-143

8) ssaQ
( YP_005212443.1 )

putative type III secretion protein

NC_016831
(Salmonella enterica RKS5078)

2e-143

9) epaO
( YP_002215714.1 )

type III secretion system protein

NC_011205
(Salmonella enterica CT_02021853)

3e-143

10) SBOV14151
( YP_008505285.1 )

type III secretion apparatus protein, YscQ/HrcQ family

NC_022241
(Salmonella enterica 3114)

4e-143

11) ssaQ
( NP_456110.1 )

putative type III secretion protein

NC_003198
(Salmonella enterica CT18)

6e-143

12) STBHUCCB_13760
( YP_005216934.1 )

Secretion system apparatus protein SsaQ

NC_016832
(Salmonella enterica P-stx-12)

6e-143

13) ssaQ
( NP_805089.1 )

type III secretion system protein

NC_004631
(Salmonella enterica Ty2)

6e-143

14) TY21A_06535
( YP_007925611.1 )

type III secretion system protein

NC_021176
(Salmonella enterica Ty21a)

6e-143

15) ssaQ
( YP_002226667.1 )

type III secretion system protein

NC_011274
(Salmonella enterica 287/91)

1e-142

16) ssaQ
( YP_002243727.1 )

type III secretion system protein

NC_011294
(Salmonella enterica P125109)

1e-142

17) I137_05695
( YP_008380649.1 )

type III secretion system protein SsaQ

NC_021984
(Salmonella enterica S06004)

1e-142

18) SE451236_12955
( YP_008265617.1 )

type III secretion system protein SsaQ

NC_021820
(Salmonella enterica 08-1736)

9e-143

19) ssaQ
( YP_005237288.1 )

type III secretion system protein

NC_016856
(Salmonella enterica 14028S)

9e-143

20) ssaQ
( YP_005396815.1 )

type III secretion protein

NC_017046
(Salmonella enterica 798)

9e-143

21) SSPA1333
( YP_002142172.1 )

type III secretion system protein

NC_011147
(Salmonella enterica AKU12601)

9e-143

22) ssaQ
( YP_150686.1 )

type III secretion protein

NC_006511
(Salmonella enterica ATCC 9150)

9e-143

23) CFSAN001921_10055
( YP_008255385.1 )

type III secretion system protein SsaQ

NC_021814
(Salmonella enterica CFSAN001921)

9e-143

24) STMMW_14231
( YP_005232477.1 )

putative type III secretion protein

NC_016854
(Salmonella enterica D23580)

9e-143

25) ssaQ
( NP_460383.1 )

type III secretion system protein

NC_003197
(Salmonella enterica LT2)

9e-143

26) ssaQ
( YP_005181262.1 )

putative type III secretion protein

NC_016810
(Salmonella enterica SL1344)

9e-143

27) epaO
( YP_002040670.1 )

type III secretion system protein

NC_011080
(Salmonella enterica SL254)

9e-143

28) ssaQ
( YP_005242319.1 )

type III secretion system protein

NC_016857
(Salmonella enterica ST4/74)

9e-143

29) STMDT12_C14340
( YP_005247130.1 )

type III secretion system protein

NC_016860
(Salmonella enterica T000240)

9e-143

30) STU288_03410
( YP_007901787.1 )

type III secretion system protein SsaQ

NC_021151
(Salmonella enterica U288)

9e-143

31) ssaQ
( YP_005251922.1 )

type III secretion system protein

NC_016863
(Salmonella enterica UK-1)

9e-143

32) SN31241_24880
( YP_008360404.1 )

Secretion system apparatus protein SsaQ

NC_021902
(Salmonella enterica USMARC-S3124.1)

9e-143

33) CFSAN002050_13485
( YP_008260608.1 )

type III secretion system protein SsaQ

NC_021818
(Salmonella enterica CFSAN002050)

3e-142

34) SPAB_01907
( YP_001588130.1 )

type III secretion system protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

8e-142

35) epaO
( YP_002146624.1 )

type III secretion system protein

NC_011149
(Salmonella enterica SL483)

2e-141

36) CFSAN001992_04500
( YP_007470658.1 )

type III secretion system protein SsaQ

NC_020307
(Salmonella enterica CFSAN001992)

5e-140

37) ssaQ
( YP_008480905.1 )

putative type III secretion protein

NC_022221
(Salmonella enterica CDC1983-67)

9e-139

38) epaO
( YP_002114431.1 )

type III secretion system protein

NC_011094
(Salmonella enterica CVM19633)

5e-138

39) SARI_01564
( YP_001570600.1 )

type III secretion system protein

NC_010067
(Salmonella enterica RSK2980)

6e-125

• Sequence Alignments

1) ssaQ in NC_006905


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  502 bits (1892),  Expect = 1e-143, Method: Compositional matrix adjust.
 Identities = 322/322 (100%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

2) SEEB0189_12445 in NC_021844


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  502 bits (1892),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 321/322 (99%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

3) SEEH1578_16325 in NC_021810


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  502 bits (1892),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 321/322 (99%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

4) SU5_02034 in NC_017623


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  502 bits (1892),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 321/322 (99%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

5) CFSAN002069_01910 in NC_021812


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  502 bits (1892),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 321/322 (99%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

6) epaO in NC_011083


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  502 bits (1892),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 321/322 (99%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

7) ssaQ in NC_012125


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  502 bits (1892),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 321/322 (99%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

8) ssaQ in NC_016831


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  501 bits (1890),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 315/322 (98%), Positives = 320/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEECWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAE+CWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAARQQIYPAPPVALPVYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSA RQQIYPAPPV +PVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

9) epaO in NC_011205


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  501 bits (1888),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 320/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSVIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRS IDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

10) SBOV14151 in NC_022241


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  500 bits (1887),  Expect = 4e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTIHYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTI+YHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  IVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
             VEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

11) ssaQ in NC_003198


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  500 bits (1884),  Expect = 6e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIEPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAI+PELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMLKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPM KSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

12) STBHUCCB_13760 in NC_016832


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  500 bits (1884),  Expect = 6e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIEPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAI+PELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMLKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPM KSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

13) TY21A_06535 in NC_021176


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  500 bits (1884),  Expect = 6e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIEPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAI+PELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMLKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPM KSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

14) ssaQ in NC_004631


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  500 bits (1884),  Expect = 6e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIEPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAI+PELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMLKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPM KSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

15) ssaQ in NC_011294


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1880),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 317/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEECWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAE+CWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAARQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSA RQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

16) ssaQ in NC_011274


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1880),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 317/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEECWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAE+CWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAARQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSA RQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

17) I137_05695 in NC_021984


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1880),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 317/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEECWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAE+CWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAARQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSA RQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

18) SE451236_12955 in NC_021820


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

19) epaO in NC_011080


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 318/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSVIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRS IDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

20) SN31241_24880 in NC_021902


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 318/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSVIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRS IDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

21) SSPA1333 in NC_011147


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 318/322 (99%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGVAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWG+APLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

22) ssaQ in NC_006511


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 318/322 (99%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGVAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWG+APLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYLGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

23) ssaQ in NC_016856


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

24) ssaQ in NC_017046


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

25) STMMW_14231 in NC_016854


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

26) ssaQ in NC_003197


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

27) ssaQ in NC_016810


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

28) ssaQ in NC_016857


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

29) STMDT12_C14340 in NC_016860


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

30) STU288_03410 in NC_021151


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

31) ssaQ in NC_016863


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

32) CFSAN001921_10055 in NC_021814


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  499 bits (1882),  Expect = 9e-143, Method: Compositional matrix adjust.
 Identities = 319/322 (99%), Positives = 321/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

33) CFSAN002050_13485 in NC_021818


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  497 bits (1876),  Expect = 3e-142, Method: Compositional matrix adjust.
 Identities = 316/322 (99%), Positives = 320/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEMLPTQGATIGELTLSMQQYPVQQGTLFTIHYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVE+LPTQGATIGELTLSMQQYPVQQGTLFTI+YHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSVIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRS IDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

34) SPAB_01907 in NC_010102


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  496 bits (1870),  Expect = 8e-142, Method: Compositional matrix adjust.
 Identities = 317/322 (99%), Positives = 319/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTIKYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTI+YHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  IVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
             VEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMLKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPM KSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

35) epaO in NC_011149


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  494 bits (1864),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 314/322 (98%), Positives = 319/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTIHYHNELGRVWIAEQCWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTI+YHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSVIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRS IDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYpappvvvpvYSGWCQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFE+GRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLSKNTA  322
            LIACGNEFMVRITRWYL KNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

36) CFSAN001992_04500 in NC_020307


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  490 bits (1848),  Expect = 5e-140, Method: Compositional matrix adjust.
 Identities = 317/322 (99%), Positives = 320/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWVEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60
            MLRIANEERPWVE+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAGWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIA WGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  IVEEHEFHSIIFTWPTGFLRNIVGELSAERQQiypappivvpvyLGWCQLTLIELESIEI  180
             VEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPP+VVPVYLGWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

37) ssaQ in NC_022221


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  486 bits (1831),  Expect = 9e-139, Method: Compositional matrix adjust.
 Identities = 313/322 (98%), Positives = 318/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEECWQR  60
            MLRIANEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAE+CWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAARQQIypappvalpaylGWRQLTLIELESIEI  180
            TVEEHEFHSIIFTWPTGFLRNIVGELSA RQQIYPAPPV +P YLGW QLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

38) epaO in NC_011094


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  483 bits (1822),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 311/322 (97%), Positives = 317/322 (99%), Gaps = 0/322 (0%)

Query  1    MLRIVNEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTIHYHNEQGRVWIAEQCWQR  60
            MLRI NEERPW+E+LPTQGATIGELTLSMQQYPVQQGTLFTI+YHNE GRVWIAEQCWQR
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSVIDPELLYGIAEWGLAPLLQASNATLCQNEPPTSCSNLPHQLALHIKW  120
            WCEGLIGTANRS IDPELLYGIAEWGLAPLLQAS+ATLCQNEPPTSCSNLPHQLALHIKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  IVEEHEFHSIIFTWPTGFLRNIVGELSAERQQiypappivvpvySGWCQLTLIELESIEI  180
             VEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPP+VVPVY GWCQLTLIELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240
            GMGVRIHCFGDIRLGFFAIQLPGGIY+RVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300
            GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLCKNTA  322
            LIACGNEFMVRITRWYLCKNTA
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322

39) SARI_01564 in NC_010067


> NC_006905_P3|43|G41|62180009|YP_216426.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|37727..38695|ssaQ|SC1439|type 
III secretion system protein
Length=322

 Score =  440 bits (1657),  Expect = 6e-125, Method: Compositional matrix adjust.
 Identities = 276/322 (86%), Positives = 303/322 (95%), Gaps = 0/322 (0%)

Query  1    MLTIANEERPWMDILPTEGATIGELTLRMQEYPVQEGILFTINYNNELGRVWIAEQCWLR  60
            ML IANEERPW++ILPT+GATIGELTL MQ+YPVQ+G LFTINY+NELGRVWIAEQCW R
Sbjct  1    MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQR  60

Query  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQKEPPTFCSNVPHQLTLNIKW  120
            WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQ+EPPT CSN+PHQL+L+IKW
Sbjct  61   WCEGLIGTANRSAIDPELLYGIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKW  120

Query  121  IVEEHEFHSIIFKWPTAFLQNIVGELSAERQQiypappivvpvyLGWCHLTLTELESIEI  180
             VEEHEFHSIIF WPT+FL+NIVGELSAERQQIYPAPP+VVPVYLGWC+LTL ELESIEI
Sbjct  121  TVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVVVPVYLGWCQLTLIELESIEI  180

Query  181  GMGIRIHCFGDVRIGCFVIQLPGRIYARVLLTEDNMMKFDELVQDIETLLAQEGPILKSD  240
            GMG+RIHCFGD+R+G F IQLPG IY+RVLLTEDN MKFDELVQDIETLLA  +P+ KSD
Sbjct  181  GMGVRIHCFGDIRLGFFAIQLPGGIYSRVLLTEDNTMKFDELVQDIETLLASGSPMSKSD  240

Query  241  IASSVELEQLPQSVLFEIGRASVEIGQLRQLKAGDVLPVGGCFAPEVTIRLNGRVIGQGE  300
             +SSVELEQ+PQ VLFEIGRAS+EIGQLRQLK+GDVLPVGGCFAPEVTIR+N+R+IGQGE
Sbjct  241  GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGE  300

Query  301  LIACGNEFMVRITRWYLSKNTV  322
            LIACGNEFMVRITRWYL KNT 
Sbjct  301  LIACGNEFMVRITRWYLCKNTA  322