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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AY147028

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Psyr_1220
( YP_234312.1 )

type III effector HopX1

NC_007005
(Pseudomonas syringae B728a)

9e-157

2) hopX1
( YP_273555.1 )

type III effector HopX1

NC_005773
(Pseudomonas syringae 1448A)

1e-121

3) HopX1
( NP_808672.1 )

type III effector HopX1

NC_004633
(Pseudomonas syringae DC3000)

2e-120

• Sequence Alignments

1) Psyr_1220 in NC_007005


> AY147028|5|G4|32419359|AAN85190.1|Pseudomonas_syringae_pv._syringae_W4N_15|-|1804..2952|-|-|unknown
Length=382

 Score =  546 bits (2059),  Expect = 9e-157, Method: Compositional matrix adjust.
 Identities = 370/382 (97%), Positives = 376/382 (99%), Gaps = 0/382 (0%)

Query  1    MRIHSSGHGISGPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVK  60
            MRIHSSGHGI +PVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVK
Sbjct  1    MRIHSSGHGICAPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVK  60

Query  61   TRLPPVASAGQSLSETPSSLPGYlllrrldrrpldQDAIKGLIPADEAVGEARRALPFGR  120
            TRLPPVASAGQSLSETPSSLPGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGR
Sbjct  61   TRLPPVASAGQSLSETPSSLPGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGR  120

Query  121  GNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPENEDMNWHVLVAMSGQVFGAGNC  180
            GNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPE+EDMNWHVLVAMSGQVFGAGNC
Sbjct  121  GNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPESEDMNWHVLVAMSGQVFGAGNC  180

Query  181  GEHARIASFAYGASAQEKGRAGDENIHLAAQSGEDHVWAETDDSSAGSSPIVMDPWSNGP  240
            GEHARIASFAYGA AQEKGR+GDENIHL+AQSGEDHVWAETDDSSAGSSPIVMDPWSNGP
Sbjct  181  GEHARIASFAYGALAQEKGRTGDENIHLSAQSGEDHVWAETDDSSAGSSPIVMDPWSNGP  240

Query  241  AVFAEDSRFAKDRRAVERTDSFTLSTAAKAGKITRETAEKALTQATSrlqqrladqqaqV  300
            AVFAEDSRFAKDR AVERTDSFTLSTAA AGKITRETAEKALTQATSRLQQRLADQQAQV
Sbjct  241  AVFAEDSRFAKDRSAVERTDSFTLSTAAEAGKITRETAEKALTQATSRLQQRLADQQAQV  300

Query  301  SPVEGGRYRQENSVLDDAFARRVSDMLNNADPRRALQVEIEASGVAMSLGAQGVKTVVRQ  360
            SPVEG+RYRQENSVLDDAFARRVSD LNNADPRRALQVEIEASGVAMSLGAQGVKTVV+Q
Sbjct  301  SPVEGSRYRQENSVLDDAFARRVSDTLNNADPRRALQVEIEASGVAMSLGAQGVKTVVQQ  360

Query  361  APKVVRQARGVASAKGMSPRAT  382
            APKVVRQARGVASAKGMS RAT
Sbjct  361  APKVVRQARGVASAKGMSQRAT  382

2) hopX1 in NC_005773


> AY147028|5|G4|32419359|AAN85190.1|Pseudomonas_syringae_pv._syringae_W4N_15|-|1804..2952|-|-|unknown
Length=382

 Score =  429 bits (1614),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 289/380 (77%), Positives = 347/380 (92%), Gaps = 1/380 (0%)

Query  1    MRIHSAGHSLPAPGPSVETTEKAVqsssaqnpascssq-TERPEAGSTQVRPNYPYSSVK  59
            MRIHS+GH++ AP +S ET EKAVQSS+  +  +  S  +E+PE+ S Q RPNYPYSSVK
Sbjct  1    MRIHSSGHGICAPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVK  60

Query  60   TRLPPVSSTGQAISDTpsslpgylllrrldrrpldedsIKALVPADealrearralPFGR  119
            TRLPPV+S+GQ++S+TPSSLPGYLLLRRLDRRPLD+D+IK+L+PADEA+ EARRALPFGR
Sbjct  61   TRLPPVASAGQSLSETPSSLPGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGR  120

Query  120  GNIDVDAQRTHLQSGARAVAAKRLRKDAERAGHEPMPENDEMNWHVLVAMSGQVFGAGNC  179
            GNIDVDAQR++L+SGAR++AA+RLRKDAE AGHEPMPE+++MNWHVLVAMSGQVFGAGNC
Sbjct  121  GNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPESEDMNWHVLVAMSGQVFGAGNC  180

Query  180  GEHARIASFAYGALAQESGRSPREKIHLAEQPGKDHVWAETDNSSAGSSPIVMDPWSNGA  239
            GEHARIASFAYGALAQE GR+  E+IHL+ Q+G DHVWAETD+SSAGSSPIVMDPWSNG+
Sbjct  181  GEHARIASFAYGALAQEKGRTGDENIHLSAQSGEDHVWAETDDSSAGSSPIVMDPWSNGP  240

Query  240  AILAEDSRFAKDRSAVERTYSFTLAMAAEAGKVARETAENVLTHTTSRLQKRLADQLPNV  299
            A++AEDSRFAKDRSAVERT SFTL+ AAEAGK++RETAE+ LT++TSRLQ+RLADQ ++V
Sbjct  241  AVFAEDSRFAKDRSAVERTDSFTLSTAAEAGKITRETAEKALTQATSRLQQRLADQQAQV  300

Query  300  SPLEGGRYQPKKSVLDEAFARRVSDKLNSDDPRRALQMEIEAVGVAMSLGAEGVKTVARQ  359
            SP+EG+RY+  +SVLD+AFARRVSD LN+ DPRRALQ+EIEA GVAMSLGA+GVKTV +Q
Sbjct  301  SPVEGSRYRQENSVLDDAFARRVSDTLNNADPRRALQVEIEASGVAMSLGAQGVKTVVQQ  360

Query  360  APKVVRQARSVASSKGMPPR  379
            APKVVRQAR+VAS+KGM+ R
Sbjct  361  APKVVRQARGVASAKGMSQR  380

3) HopX1 in NC_004633


> AY147028|5|G4|32419359|AAN85190.1|Pseudomonas_syringae_pv._syringae_W4N_15|-|1804..2952|-|-|unknown
Length=382

 Score =  424 bits (1598),  Expect = 2e-120, Method: Compositional matrix adjust.
 Identities = 274/382 (72%), Positives = 331/382 (87%), Gaps = 2/382 (0%)

Query  1    MKIHNAGLTPPLPGISNGNVGKAAQSSITQPQSQQGSYGLPPESSETRPDRARANYPYSS  60
            M+IH++G     P  S   V KA QSS +Q+Q++ +  G P+E +E+R+ +AR+NYPYSS
Sbjct  1    MRIHSSGHGICAPVSSAETVEKAVQSS-AQAQNEASHSG-PSEHPESRSCQARPNYPYSS  58

Query  61   VQTRLPPVASAGKPLPDTPSSLPGYLLLRRLDHRPVDQEGTKSLIPADKAVAEARRALPF  120
            V+TRLPPVASAG++L++TPSSLPGYLLLRRLD+RP+DQ++ K+LIPAD AV+EARRALPF
Sbjct  59   VKTRLPPVASAGQSLSETPSSLPGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPF  118

Query  121  GRGNIDVDAQLSNLESGARTLAARCLRKDAEAAGHEPMPANEPMNWHVLVAMSGQVFGAG  180
            GRGNIDVDAQ SNLESGARTLAAR LRKDAE+AGHEPMP +E MNWHVLVAMSGQVFGAG
Sbjct  119  GRGNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPESEDMNWHVLVAMSGQVFGAG  178

Query  181  NCGEHARIASFAYGALAQENGRSEYENIYLAASTEEDHVWAETDESQSGTSTIVMDPWSN  240
            NCGEHARIASFAYGALAQE+GR+  ENI L+A + EDHVWAETD+S +G+S IVMDPWSN
Sbjct  179  NCGEHARIASFAYGALAQEKGRTGDENIHLSAQSGEDHVWAETDDSSAGSSPIVMDPWSN  238

Query  241  GSAIFAEDSRFAKNRNAVERTDTFNLSTAAEAGKITRETAEKALTQVTTRLQKRLADQQE  300
            G+A+FAEDSRFAK+R+AVERTD+F LSTAAEAGKITRETAEKALTQ T+RLQ+RLADQQ 
Sbjct  239  GPAVFAEDSRFAKDRSAVERTDSFTLSTAAEAGKITRETAEKALTQATSRLQQRLADQQA  298

Query  301  QVSPIKSGRYRPEKSVLDDAFVRRVSDKLTSPDLRRALQVDIEAVGVAMSLGTKGVKDAT  360
            QVSP+ ++RYR E+SVLDDAF RRVSD L ++D RRALQV+IEA GVAMSLG++GVK   
Sbjct  299  QVSPVEGSRYRQENSVLDDAFARRVSDTLNNADPRRALQVEIEASGVAMSLGAQGVKTVV  358

Query  361  RQARPLVELAVKVASPQGLARR  382
            +QA  +V  A  VAS++G+++R
Sbjct  359  QQAPKVVRQARGVASAKGMSQR  380