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Homologs of pivNM-2 gene of NC_003112_P2

14

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) NMBB_2002
( YP_005883316.1 )

putative transposase

NC_017505
(Neisseria meningitidis alpha710)

6e-147

100

2) NMBH4476_1702
( YP_005900330.1 )

IS110 family transposase

NC_017516
(Neisseria meningitidis H44/76)

6e-147

100

3) NMBM01240149_0437
( YP_005895266.1 )

IS110 family transposase

NC_017514
(Neisseria meningitidis M01-240149)

6e-147

100

4) NMBM04240196_1684
( YP_005898355.1 )

IS110 family transposase

NC_017515
(Neisseria meningitidis M04-240196)

6e-147

100

5) pivNM-2
( NP_274751.1 )

pilin gene inverting protein PivNM-2

NC_003112
(Neisseria meningitidis MC58)

6e-147

100

6) NMBNZ0533_1723
( YP_005904287.1 )

putative transposase

NC_017518
(Neisseria meningitidis NZ-05/33)

6e-147

100

7) NLA_6740
( YP_004048298.1 )

transposase

NC_014752
(Neisseria lactamica 020-06)

1e-85

56

8) NGTW08_0166
( YP_005889003.1 )

hypothetical protein

NC_017511
(Neisseria gonorrhoeae TCDC-NG08107)

5e-39

41

9) NGTW08_0841
( YP_005889673.1 )

hypothetical protein

NC_017511
(Neisseria gonorrhoeae TCDC-NG08107)

5e-39

41

10) NGTW08_1156
( YP_005889987.1 )

hypothetical protein

NC_017511
(Neisseria gonorrhoeae TCDC-NG08107)

5e-39

41

11) NGTW08_1545
( YP_005890368.1 )

hypothetical protein

NC_017511
(Neisseria gonorrhoeae TCDC-NG08107)

5e-39

41

12) NGTW08_1581
( YP_005890402.1 )

hypothetical protein

NC_017511
(Neisseria gonorrhoeae TCDC-NG08107)

5e-39

41

13) NGTW08_1606
( YP_005890427.1 )

hypothetical protein

NC_017511
(Neisseria gonorrhoeae TCDC-NG08107)

5e-39

41

14) NGTW08_1667
( YP_005890487.1 )

hypothetical protein

NC_017511
(Neisseria gonorrhoeae TCDC-NG08107)

5e-39

41

• Sequence Alignments

1) NMBB_2002 in NC_017505


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  513 bits (1935),  Expect = 6e-147, Method: Compositional matrix adjust.
 Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%)

Query  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60
            MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY
Sbjct  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60

Query  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120
            YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP
Sbjct  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120

Query  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180
            TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF
Sbjct  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180

Query  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240
            YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV
Sbjct  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240

Query  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300
            NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA
Sbjct  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300

Query  301  FTILQNGQDFQVERYK  316
            FTILQNGQDFQVERYK
Sbjct  301  FTILQNGQDFQVERYK  316

2) NMBH4476_1702 in NC_017516


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  513 bits (1935),  Expect = 6e-147, Method: Compositional matrix adjust.
 Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%)

Query  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60
            MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY
Sbjct  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60

Query  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120
            YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP
Sbjct  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120

Query  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180
            TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF
Sbjct  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180

Query  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240
            YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV
Sbjct  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240

Query  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300
            NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA
Sbjct  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300

Query  301  FTILQNGQDFQVERYK  316
            FTILQNGQDFQVERYK
Sbjct  301  FTILQNGQDFQVERYK  316

3) NMBM01240149_0437 in NC_017514


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  513 bits (1935),  Expect = 6e-147, Method: Compositional matrix adjust.
 Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%)

Query  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60
            MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY
Sbjct  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60

Query  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120
            YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP
Sbjct  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120

Query  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180
            TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF
Sbjct  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180

Query  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240
            YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV
Sbjct  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240

Query  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300
            NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA
Sbjct  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300

Query  301  FTILQNGQDFQVERYK  316
            FTILQNGQDFQVERYK
Sbjct  301  FTILQNGQDFQVERYK  316

4) NMBM04240196_1684 in NC_017515


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  513 bits (1935),  Expect = 6e-147, Method: Compositional matrix adjust.
 Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%)

Query  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60
            MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY
Sbjct  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60

Query  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120
            YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP
Sbjct  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120

Query  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180
            TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF
Sbjct  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180

Query  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240
            YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV
Sbjct  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240

Query  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300
            NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA
Sbjct  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300

Query  301  FTILQNGQDFQVERYK  316
            FTILQNGQDFQVERYK
Sbjct  301  FTILQNGQDFQVERYK  316

5) pivNM-2 in NC_003112


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  513 bits (1935),  Expect = 6e-147, Method: Compositional matrix adjust.
 Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%)

Query  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60
            MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY
Sbjct  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60

Query  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120
            YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP
Sbjct  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120

Query  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180
            TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF
Sbjct  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180

Query  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240
            YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV
Sbjct  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240

Query  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300
            NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA
Sbjct  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300

Query  301  FTILQNGQDFQVERYK  316
            FTILQNGQDFQVERYK
Sbjct  301  FTILQNGQDFQVERYK  316

6) NMBNZ0533_1723 in NC_017518


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  513 bits (1935),  Expect = 6e-147, Method: Compositional matrix adjust.
 Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%)

Query  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60
            MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY
Sbjct  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60

Query  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120
            YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP
Sbjct  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120

Query  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180
            TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF
Sbjct  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180

Query  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240
            YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV
Sbjct  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240

Query  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300
            NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA
Sbjct  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300

Query  301  FTILQNGQDFQVERYK  316
            FTILQNGQDFQVERYK
Sbjct  301  FTILQNGQDFQVERYK  316

7) NLA_6740 in NC_014752


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  309 bits (1159),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 174/316 (56%), Positives = 239/316 (76%), Gaps = 3/316 (0%)

Query  1    MHLGIDVSKNTLDCCLISDGIFYERKFKNDSSGIDKLQTWLQEHGADSNLHCCCEATGTY  60
            M LGIDVSK T+DCCLI DG  Y++KF+N+ +G+++L  WLQ H  + +LHC CEATGTY
Sbjct  1    MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKLHCVCEATGTY  60

Query  61   YEESARALSRRYKMSVVNPRTIKGFGTAVMNRSKTDRQDAKLIARYCQAMKP--EQWQSA  118
            YE  A  L  RY ++V NPR IKG++ A ++RSKTD QDAKLIA+YCQ  K     W+++
Sbjct  61   YEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCQDRKHKLKAWKPP  120

Query  119  TPEHRQLQELVRYIARTKRQRAAEQIKRQTAPDSLKPHIQSTIEHLTELLTRLEQDLKAH  178
            T E++QLQE+ RY+   K+QRA+E+ K++ APD +K+HIQ+TI +LT  +  + ++L   
Sbjct  121  TKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQTTISNLTAQIQIVKKQLLQF  180

Query  179  YRSHPEHDSRRKRLKTIDGIGENAAAV-LCSVITDRFTHAKQLVAYLGLDPKEHQSGTSV  237
            Y+ +P  ++ RKRLKTI GIGE+A+AV L +   + F +A+Q+ AYLGLDP+  QSGTSV
Sbjct  181  YKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSV  240

Query  238  RGRTRISKIGKSDIRAALYMPALVAYRMGAFPDFTARLEAKGKPPKVIIVAIMRKLAVIA  297
             G++RISKIG S+IR +LYMPALVAYR  AFP+F +RL  KGK  K+I++AIMRKLAVIA
Sbjct  241  NGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA  300

Query  298  FNLLKNGEEFDRSRYR  313
            F +L+NG++F+  RY+
Sbjct  301  FTILQNGQDFQVERYK  316

8) NGTW08_0166 in NC_017511


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 110/273 (41%), Positives = 181/273 (67%), Gaps = 7/273 (2%)

Query  7    QNLH-ICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQY  65
            ++LH +C EATG YYE +A+Y+   Y++ V NP KI  YA + ++R+KTD QDAKLIAQY
Sbjct  48   DKLHCVC-EATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQY  106

Query  66   CRSAQESELVKRQKPTDEQYRLLRMTAAYAQ-IKSECAAMKNRHHaakdeeaakayaQII  124
            C+  +   L  ++ PT EQ + L+  A Y + +K + A+ K ++H A D   +   +  I
Sbjct  107  CQD-RKHKLKAWKPPTKEQ-KQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQT-TI  163

Query  125  KAMNEQLEVLKEKIKE-QTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKF  183
              +  Q++++K ++ +   ++P+ ++  KRL TI +IG  ++AVL+       F  + +F
Sbjct  164  SNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQF  223

Query  184  AAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEkkk  243
            +A+ GL P++ +SGTSV GK++++K+G+  +R  L+MPA+VAYR  AFP+F+ RL +K K
Sbjct  224  TAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGK  283

Query  244  pkkVIIAALMRKLAVIAYHVHKKGGDYDPSRYK  276
              K+I+ A+MRKLAVIA+ + ++G D++  RYK
Sbjct  284  HIKLILIAIMRKLAVIAFTILQNGQDFQVERYK  316

9) NGTW08_0841 in NC_017511


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 110/273 (41%), Positives = 181/273 (67%), Gaps = 7/273 (2%)

Query  7    QNLH-ICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQY  65
            ++LH +C EATG YYE +A+Y+   Y++ V NP KI  YA + ++R+KTD QDAKLIAQY
Sbjct  48   DKLHCVC-EATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQY  106

Query  66   CRSAQESELVKRQKPTDEQYRLLRMTAAYAQ-IKSECAAMKNRHHaakdeeaakayaQII  124
            C+  +   L  ++ PT EQ + L+  A Y + +K + A+ K ++H A D   +   +  I
Sbjct  107  CQD-RKHKLKAWKPPTKEQ-KQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQT-TI  163

Query  125  KAMNEQLEVLKEKIKE-QTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKF  183
              +  Q++++K ++ +   ++P+ ++  KRL TI +IG  ++AVL+       F  + +F
Sbjct  164  SNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQF  223

Query  184  AAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEkkk  243
            +A+ GL P++ +SGTSV GK++++K+G+  +R  L+MPA+VAYR  AFP+F+ RL +K K
Sbjct  224  TAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGK  283

Query  244  pkkVIIAALMRKLAVIAYHVHKKGGDYDPSRYK  276
              K+I+ A+MRKLAVIA+ + ++G D++  RYK
Sbjct  284  HIKLILIAIMRKLAVIAFTILQNGQDFQVERYK  316

10) NGTW08_1156 in NC_017511


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 110/273 (41%), Positives = 181/273 (67%), Gaps = 7/273 (2%)

Query  7    QNLH-ICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQY  65
            ++LH +C EATG YYE +A+Y+   Y++ V NP KI  YA + ++R+KTD QDAKLIAQY
Sbjct  48   DKLHCVC-EATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQY  106

Query  66   CRSAQESELVKRQKPTDEQYRLLRMTAAYAQ-IKSECAAMKNRHHaakdeeaakayaQII  124
            C+  +   L  ++ PT EQ + L+  A Y + +K + A+ K ++H A D   +   +  I
Sbjct  107  CQD-RKHKLKAWKPPTKEQ-KQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQT-TI  163

Query  125  KAMNEQLEVLKEKIKE-QTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKF  183
              +  Q++++K ++ +   ++P+ ++  KRL TI +IG  ++AVL+       F  + +F
Sbjct  164  SNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQF  223

Query  184  AAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEkkk  243
            +A+ GL P++ +SGTSV GK++++K+G+  +R  L+MPA+VAYR  AFP+F+ RL +K K
Sbjct  224  TAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGK  283

Query  244  pkkVIIAALMRKLAVIAYHVHKKGGDYDPSRYK  276
              K+I+ A+MRKLAVIA+ + ++G D++  RYK
Sbjct  284  HIKLILIAIMRKLAVIAFTILQNGQDFQVERYK  316

11) NGTW08_1545 in NC_017511


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 110/273 (41%), Positives = 181/273 (67%), Gaps = 7/273 (2%)

Query  7    QNLH-ICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQY  65
            ++LH +C EATG YYE +A+Y+   Y++ V NP KI  YA + ++R+KTD QDAKLIAQY
Sbjct  48   DKLHCVC-EATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQY  106

Query  66   CRSAQESELVKRQKPTDEQYRLLRMTAAYAQ-IKSECAAMKNRHHaakdeeaakayaQII  124
            C+  +   L  ++ PT EQ + L+  A Y + +K + A+ K ++H A D   +   +  I
Sbjct  107  CQD-RKHKLKAWKPPTKEQ-KQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQT-TI  163

Query  125  KAMNEQLEVLKEKIKE-QTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKF  183
              +  Q++++K ++ +   ++P+ ++  KRL TI +IG  ++AVL+       F  + +F
Sbjct  164  SNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQF  223

Query  184  AAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEkkk  243
            +A+ GL P++ +SGTSV GK++++K+G+  +R  L+MPA+VAYR  AFP+F+ RL +K K
Sbjct  224  TAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGK  283

Query  244  pkkVIIAALMRKLAVIAYHVHKKGGDYDPSRYK  276
              K+I+ A+MRKLAVIA+ + ++G D++  RYK
Sbjct  284  HIKLILIAIMRKLAVIAFTILQNGQDFQVERYK  316

12) NGTW08_1581 in NC_017511


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 110/273 (41%), Positives = 181/273 (67%), Gaps = 7/273 (2%)

Query  7    QNLH-ICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQY  65
            ++LH +C EATG YYE +A+Y+   Y++ V NP KI  YA + ++R+KTD QDAKLIAQY
Sbjct  48   DKLHCVC-EATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQY  106

Query  66   CRSAQESELVKRQKPTDEQYRLLRMTAAYAQ-IKSECAAMKNRHHaakdeeaakayaQII  124
            C+  +   L  ++ PT EQ + L+  A Y + +K + A+ K ++H A D   +   +  I
Sbjct  107  CQD-RKHKLKAWKPPTKEQ-KQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQT-TI  163

Query  125  KAMNEQLEVLKEKIKE-QTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKF  183
              +  Q++++K ++ +   ++P+ ++  KRL TI +IG  ++AVL+       F  + +F
Sbjct  164  SNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQF  223

Query  184  AAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEkkk  243
            +A+ GL P++ +SGTSV GK++++K+G+  +R  L+MPA+VAYR  AFP+F+ RL +K K
Sbjct  224  TAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGK  283

Query  244  pkkVIIAALMRKLAVIAYHVHKKGGDYDPSRYK  276
              K+I+ A+MRKLAVIA+ + ++G D++  RYK
Sbjct  284  HIKLILIAIMRKLAVIAFTILQNGQDFQVERYK  316

13) NGTW08_1606 in NC_017511


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 110/273 (41%), Positives = 181/273 (67%), Gaps = 7/273 (2%)

Query  7    QNLH-ICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQY  65
            ++LH +C EATG YYE +A+Y+   Y++ V NP KI  YA + ++R+KTD QDAKLIAQY
Sbjct  48   DKLHCVC-EATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQY  106

Query  66   CRSAQESELVKRQKPTDEQYRLLRMTAAYAQ-IKSECAAMKNRHHaakdeeaakayaQII  124
            C+  +   L  ++ PT EQ + L+  A Y + +K + A+ K ++H A D   +   +  I
Sbjct  107  CQD-RKHKLKAWKPPTKEQ-KQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQT-TI  163

Query  125  KAMNEQLEVLKEKIKE-QTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKF  183
              +  Q++++K ++ +   ++P+ ++  KRL TI +IG  ++AVL+       F  + +F
Sbjct  164  SNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQF  223

Query  184  AAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEkkk  243
            +A+ GL P++ +SGTSV GK++++K+G+  +R  L+MPA+VAYR  AFP+F+ RL +K K
Sbjct  224  TAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGK  283

Query  244  pkkVIIAALMRKLAVIAYHVHKKGGDYDPSRYK  276
              K+I+ A+MRKLAVIA+ + ++G D++  RYK
Sbjct  284  HIKLILIAIMRKLAVIAFTILQNGQDFQVERYK  316

14) NGTW08_1667 in NC_017511


> NC_003112_P2|5|G5|15677594|NP_274751.1|Neisseria_meningitidis_MC58|+|3849..4799|pivNM-2|NMB1750|pilin 
gene inverting protein 
PivNM-2
Length=316

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 110/273 (41%), Positives = 181/273 (67%), Gaps = 7/273 (2%)

Query  7    QNLH-ICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQY  65
            ++LH +C EATG YYE +A+Y+   Y++ V NP KI  YA + ++R+KTD QDAKLIAQY
Sbjct  48   DKLHCVC-EATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQY  106

Query  66   CRSAQESELVKRQKPTDEQYRLLRMTAAYAQ-IKSECAAMKNRHHaakdeeaakayaQII  124
            C+  +   L  ++ PT EQ + L+  A Y + +K + A+ K ++H A D   +   +  I
Sbjct  107  CQD-RKHKLKAWKPPTKEQ-KQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQT-TI  163

Query  125  KAMNEQLEVLKEKIKE-QTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKF  183
              +  Q++++K ++ +   ++P+ ++  KRL TI +IG  ++AVL+       F  + +F
Sbjct  164  SNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNARQF  223

Query  184  AAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEkkk  243
            +A+ GL P++ +SGTSV GK++++K+G+  +R  L+MPA+VAYR  AFP+F+ RL +K K
Sbjct  224  TAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGK  283

Query  244  pkkVIIAALMRKLAVIAYHVHKKGGDYDPSRYK  276
              K+I+ A+MRKLAVIA+ + ++G D++  RYK
Sbjct  284  HIKLILIAIMRKLAVIAFTILQNGQDFQVERYK  316