Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of HH0289 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0289
( NP_859820.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

0.0

100

• Sequence Alignments

1) HH0289 in NC_004917


> NC_004917_P1|57|G57|32265788|NP_859820.1|Helicobacter_hepaticus_ATCC_51449|-|57758..59560|-|HH0289|hypothetical 
protein
Length=600

 Score =  930 bits (3523),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 600/600 (100%), Positives = 600/600 (100%), Gaps = 0/600 (0%)

Query  1    MLLADNFRNVITMMLFGNKNKNQEISIPKDSQGKVLGNGYLYTDILESKRDNPTIKPFQK  60
            MLLADNFRNVITMMLFGNKNKNQEISIPKDSQGKVLGNGYLYTDILESKRDNPTIKPFQK
Sbjct  1    MLLADNFRNVITMMLFGNKNKNQEISIPKDSQGKVLGNGYLYTDILESKRDNPTIKPFQK  60

Query  61   DTQYRITSTFGRRTDLKNREPHSGIDICFSQSFSMGEFTYKKPPLFSPIDGQIIFNEKSS  120
            DTQYRITSTFGRRTDLKNREPHSGIDICFSQSFSMGEFTYKKPPLFSPIDGQIIFNEKSS
Sbjct  61   DTQYRITSTFGRRTDLKNREPHSGIDICFSQSFSMGEFTYKKPPLFSPIDGQIIFNEKSS  120

Query  121  LNSVYIIDKDKNKHGLLHMDVVFVQNGQTIKQGDLVgiiggigKSLLSIDNQQVNTIYDN  180
            LNSVYIIDKDKNKHGLLHMDVVFVQNGQTIKQGDLVGIIGGIGKSLLSIDNQQVNTIYDN
Sbjct  121  LNSVYIIDKDKNKHGLLHMDVVFVQNGQTIKQGDLVGIIGGIGKSLLSIDNQQVNTIYDN  180

Query  181  VLKLQEVNYFQAFIDFLKNDFTILENITDNMQMQKAQEFINKKWHESIAKQHKAYIDILD  240
            VLKLQEVNYFQAFIDFLKNDFTILENITDNMQMQKAQEFINKKWHESIAKQHKAYIDILD
Sbjct  181  VLKLQEVNYFQAFIDFLKNDFTILENITDNMQMQKAQEFINKKWHESIAKQHKAYIDILD  240

Query  241  KNGIQAIHLNTLLKLMERKDLekekeriikneiirHLRNKFAIHLHYQIQDSKDKLLNPA  300
            KNGIQAIHLNTLLKLMERKDLEKEKERIIKNEIIRHLRNKFAIHLHYQIQDSKDKLLNPA
Sbjct  241  KNGIQAIHLNTLLKLMERKDLEKEKERIIKNEIIRHLRNKFAIHLHYQIQDSKDKLLNPA  300

Query  301  VFWNTTYKIKETHYDEQDTIIQVNDLHKIYEYSYDKNSNLLEIKTPKGRRFFPYYTSEKY  360
            VFWNTTYKIKETHYDEQDTIIQVNDLHKIYEYSYDKNSNLLEIKTPKGRRFFPYYTSEKY
Sbjct  301  VFWNTTYKIKETHYDEQDTIIQVNDLHKIYEYSYDKNSNLLEIKTPKGRRFFPYYTSEKY  360

Query  361  YTLHNPSTIKENLGLYYNIRAVDSKKFRICEYFLQEKERLKQQILLYRRYKNGKIDSKNK  420
            YTLHNPSTIKENLGLYYNIRAVDSKKFRICEYFLQEKERLKQQILLYRRYKNGKIDSKNK
Sbjct  361  YTLHNPSTIKENLGLYYNIRAVDSKKFRICEYFLQEKERLKQQILLYRRYKNGKIDSKNK  420

Query  421  DQQDSYNNWFQVISGTANFRKIDIELEPLYYQWYKRDGILGTAPEQKTENPNGTVTINLT  480
            DQQDSYNNWFQVISGTANFRKIDIELEPLYYQWYKRDGILGTAPEQKTENPNGTVTINLT
Sbjct  421  DQQDSYNNWFQVISGTANFRKIDIELEPLYYQWYKRDGILGTAPEQKTENPNGTVTINLT  480

Query  481  LSNQQGFLQNTPIYIYSYFHHRLYESKTDEYGILRFCLSFEESNKSFTLALYCHKELFNM  540
            LSNQQGFLQNTPIYIYSYFHHRLYESKTDEYGILRFCLSFEESNKSFTLALYCHKELFNM
Sbjct  481  LSNQQGFLQNTPIYIYSYFHHRLYESKTDEYGILRFCLSFEESNKSFTLALYCHKELFNM  540

Query  541  DTSSMVGNITKITLAPSHIQNKEYIGNKTMQYISKQELQSNIKVEMIQNMPYEYYFKRRK  600
            DTSSMVGNITKITLAPSHIQNKEYIGNKTMQYISKQELQSNIKVEMIQNMPYEYYFKRRK
Sbjct  541  DTSSMVGNITKITLAPSHIQNKEYIGNKTMQYISKQELQSNIKVEMIQNMPYEYYFKRRK  600