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Homologs of sseC gene of AF020808

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE451236_12865
( YP_008265599.1 )

pathogenicity island 2 effector protein SseC

NC_021820
(Salmonella enterica 08-1736)

0.0

100

2) sseC
( YP_005237270.1 )

translocation machinery component

NC_016856
(Salmonella enterica 14028S)

0.0

100

3) sseC
( NP_460365.1 )

translocation machinery component

NC_003197
(Salmonella enterica LT2)

0.0

100

4) sseC
( YP_005181244.1 )

putative pathogenicity island effector protein

NC_016810
(Salmonella enterica SL1344)

0.0

100

5) sseC
( YP_005242301.1 )

translocation machinery component

NC_016857
(Salmonella enterica ST4/74)

0.0

100

6) STMDT12_C14160
( YP_005247112.1 )

translocation machinery component

NC_016860
(Salmonella enterica T000240)

0.0

100

7) STU288_03320
( YP_007901769.1 )

pathogenicity island 2 effector protein SseC

NC_021151
(Salmonella enterica U288)

0.0

100

8) sseC
( YP_005251904.1 )

translocation machinery component

NC_016863
(Salmonella enterica UK-1)

0.0

100

9) CFSAN001921_10145
( YP_008255403.1 )

pathogenicity island 2 effector protein SseC

NC_021814
(Salmonella enterica CFSAN001921)

0.0

10) SBOV13971
( YP_008505267.1 )

translocation machinery component

NC_022241
(Salmonella enterica 3114)

0.0

11) SEEH1578_16235
( YP_008247306.1 )

pathogenicity island 2 effector protein SseC

NC_021810
(Salmonella enterica 41578)

0.0

12) SU5_02017
( YP_006087651.1 )

Secretion system effector SseC

NC_017623
(Salmonella enterica B182)

0.0

13) CFSAN002069_02000
( YP_008249260.1 )

pathogenicity island 2 effector protein SseC

NC_021812
(Salmonella enterica CFSAN002069)

0.0

14) SeHA_C1533
( YP_002045403.1 )

translocation machinery component

NC_011083
(Salmonella enterica SL476)

0.0

15) SeD_A1943
( YP_002215731.1 )

translocation machinery component

NC_011205
(Salmonella enterica CT_02021853)

0.0

16) SEEB0189_12535
( YP_008308822.1 )

pathogenicity island 2 effector protein SseC

NC_021844
(Salmonella enterica CFSAN000189)

0.0

17) SeSA_A1496
( YP_002114413.1 )

translocation machinery component

NC_011094
(Salmonella enterica CVM19633)

0.0

18) sseC
( YP_002243745.1 )

pathogenicity island effector protein

NC_011294
(Salmonella enterica P125109)

0.0

19) SSPA1351
( YP_002142190.1 )

pathogenicity island effector protein

NC_011147
(Salmonella enterica AKU12601)

0.0

20) sseC
( YP_150704.1 )

pathogenicity island effector protein

NC_006511
(Salmonella enterica ATCC 9150)

0.0

21) STMMW_14051
( YP_005232459.1 )

putative pathogenicity island effector protein

NC_016854
(Salmonella enterica D23580)

0.0

22) SNSL254_A1511
( YP_002040652.1 )

translocation machinery component

NC_011080
(Salmonella enterica SL254)

0.0

23) I137_05605
( YP_008380631.1 )

pathogenicity island 2 effector protein SseC

NC_021984
(Salmonella enterica S06004)

0.0

24) sseC
( NP_456128.1 )

putative pathogenicity island effector protein

NC_003198
(Salmonella enterica CT18)

0.0

25) STBHUCCB_13580
( YP_005216916.1 )

Secreted effector protein sseC

NC_016832
(Salmonella enterica P-stx-12)

0.0

26) sseC
( NP_805071.1 )

pathogenicity island effector protein

NC_004631
(Salmonella enterica Ty2)

0.0

27) TY21A_06450
( YP_007925594.1 )

putative pathogenicity island effector protein

NC_021176
(Salmonella enterica Ty21a)

0.0

28) sseC
( YP_008480887.1 )

putative pathogenicity island effector protein

NC_022221
(Salmonella enterica CDC1983-67)

0.0

29) sseC
( YP_005212425.1 )

putative pathogenicity island effector protein

NC_016831
(Salmonella enterica RKS5078)

0.0

30) SPAB_01925
( YP_001588148.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

0.0

31) sseC
( YP_002226685.1 )

pathogenicity island effector protein

NC_011274
(Salmonella enterica 287/91)

0.0

32) CFSAN001992_04590
( YP_007470676.1 )

pathogenicity island 2 effector protein SseC

NC_020307
(Salmonella enterica CFSAN001992)

0.0

33) sseC
( YP_216408.1 )

secretion system effector protein SseC

NC_006905
(Salmonella enterica SC-B67)

0.0

34) sseC
( YP_002637887.1 )

pathogenicity island effector protein

NC_012125
(Salmonella enterica RKS4594)

0.0

35) CFSAN002050_13395
( YP_008260590.1 )

pathogenicity island 2 effector protein SseC

NC_021818
(Salmonella enterica CFSAN002050)

0.0

36) SeAg_B1773
( YP_002146642.1 )

translocation machinery component

NC_011149
(Salmonella enterica SL483)

0.0

37) sseC
( YP_005396798.1 )

pathogenicity island effector protein

NC_017046
(Salmonella enterica 798)

2e-178

38) SN31241_24700
( YP_008360386.1 )

Secreted effector protein SseC

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-177

39) SARI_01581
( YP_001570617.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-148

40) YE105_C0318
( YP_004296519.1 )

hypothetical protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-56

41) Y11_35261
( YP_006007025.1 )

secretion system effector protein SseC

NC_017564
(Yersinia enterocolitica Y11)

1e-56

• Sequence Alignments

1) SE451236_12865 in NC_021820


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

2) sseC in NC_016856


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

3) sseC in NC_003197


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

4) sseC in NC_016810


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

5) sseC in NC_016857


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

6) STMDT12_C14160 in NC_016860


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

7) STU288_03320 in NC_021151


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

8) sseC in NC_016863


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

9) CFSAN001921_10145 in NC_021814


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 483/484 (99%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIDQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKI+QLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

10) SBOV13971 in NC_022241


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2578),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/484 (98%), Positives = 481/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

11) SEEH1578_16235 in NC_021810


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2578),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/484 (98%), Positives = 481/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

12) SU5_02017 in NC_017623


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2578),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/484 (98%), Positives = 481/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

13) CFSAN002069_02000 in NC_021812


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2578),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/484 (98%), Positives = 481/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

14) SeHA_C1533 in NC_011083


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  682 bits (2578),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/484 (98%), Positives = 481/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

15) SeD_A1943 in NC_011205


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  680 bits (2570),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 470/484 (98%), Positives = 481/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFIATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAF+ATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

16) SEEB0189_12535 in NC_021844


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  678 bits (2565),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 479/484 (99%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

17) sseC in NC_011294


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  678 bits (2565),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 479/484 (99%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

18) SeSA_A1496 in NC_011094


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  678 bits (2565),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 479/484 (99%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

19) SSPA1351 in NC_011147


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  678 bits (2565),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 463/484 (96%), Positives = 474/484 (98%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVSPGEMEEESAEFSRNVEKNMTKNAGKSFTkegvkamakeavkealekyaQE  360
            FEPLEREM  + EM EE+AEFSRNVE+NMT++AGKSFTKEGVKAMAKEA KEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

20) sseC in NC_006511


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  678 bits (2565),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 463/484 (96%), Positives = 474/484 (98%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVSPGEMEEESAEFSRNVEKNMTKNAGKSFTkegvkamakeavkealekyaQE  360
            FEPLEREM  + EM EE+AEFSRNVE+NMT++AGKSFTKEGVKAMAKEA KEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

21) SNSL254_A1511 in NC_011080


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  677 bits (2560),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 478/484 (99%), Positives = 483/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAVGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSA GVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

22) STMMW_14051 in NC_016854


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  677 bits (2559),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 483/484 (99%), Positives = 483/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFCNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKF NKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

23) I137_05605 in NC_021984


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 477/484 (99%), Positives = 484/484 (100%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLLNMFKKILYALLRDCSFKGLQAIRCATEGSSQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVL+NMFKKILYALLRDCSFKGLQAIRCATEG+SQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

24) sseC in NC_003198


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  675 bits (2553),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 461/484 (96%), Positives = 473/484 (98%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVSPGEMEEESAEFSRNVEKNMTKNAGKSFTkegvkamakeavkealekyaQE  360
            FEPLEREM  + EM EE+AEFSRNVE+NMT++AGKSFTKEGVKAMAKEA KEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEGLYKGSGAALRGVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLE LYKGSGAALR+VLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

25) STBHUCCB_13580 in NC_016832


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  675 bits (2553),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 461/484 (96%), Positives = 473/484 (98%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVSPGEMEEESAEFSRNVEKNMTKNAGKSFTkegvkamakeavkealekyaQE  360
            FEPLEREM  + EM EE+AEFSRNVE+NMT++AGKSFTKEGVKAMAKEA KEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEGLYKGSGAALRGVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLE LYKGSGAALR+VLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

26) TY21A_06450 in NC_021176


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  675 bits (2553),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 461/484 (96%), Positives = 473/484 (98%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVSPGEMEEESAEFSRNVEKNMTKNAGKSFTkegvkamakeavkealekyaQE  360
            FEPLEREM  + EM EE+AEFSRNVE+NMT++AGKSFTKEGVKAMAKEA KEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEGLYKGSGAALRGVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLE LYKGSGAALR+VLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

27) sseC in NC_004631


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  675 bits (2553),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 461/484 (96%), Positives = 473/484 (98%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVgageaeiealaeKFGEEVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEE+VERMVGAGEAEIE LAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVSPGEMEEESAEFSRNVEKNMTKNAGKSFTkegvkamakeavkealekyaQE  360
            FEPLEREM  + EM EE+AEFSRNVE+NMT++AGKSFTKEGVKAMAKEA KEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGANQMNTGMVNTEKAKLE  420
            G KFLLK+FRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGA+QMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEGLYKGSGAALRGVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQT++QKKIEQKRLE LYKGSGAALR+VLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GWRA  484
            G RA
Sbjct  481  GYRA  484

28) sseC in NC_022221


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 476/484 (99%), Positives = 483/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  VNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
             NPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLLNMFKKILYALLRDCSFKGLQAIRCATEGSSQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVL+NMFKKILYALLRDCSFKGLQAIRCATEG+SQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

29) sseC in NC_016831


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 476/484 (99%), Positives = 483/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  VNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
             NPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLLNMFKKILYALLRDCSFKGLQAIRCATEGSSQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVL+NMFKKILYALLRDCSFKGLQAIRCATEG+SQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

30) SPAB_01925 in NC_010102


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  673 bits (2543),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 464/484 (96%), Positives = 479/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGLGEEMVERMVgagegeieelaekfgeeVSENFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSG+GEE+VERMVGAGE+EIEELAEKFGEEVSE+FSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FETIEREMVSPGEMEEESAEFSRKVENNMTKNAGKSFTkegvkamakeaakealekCVQE  360
            FE +EREM  + EM EE+AEFSR+VENNMT++AGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

31) sseC in NC_011274


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  670 bits (2533),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 473/484 (98%), Positives = 481/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSTAGVTALTHHHLSNVSCVSSGSLGKRRHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDS+AGVTALTHHHLSNVSCVSSGSLGKR+HRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRLSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKR SLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGSLKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIG+LKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAVGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+A GCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTkegvkamakeaakealekCVQE  360
            FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEKLYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLE LYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

32) sseC in NC_006905


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  657 bits (2482),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 464/484 (96%), Positives = 477/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFLKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESF KQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVIANEMAEESAEFSREVENNMTRSAGKSFTkegvkamakeaakealekyaqe  360
            FEPLEREM +ANEMAEE+AEFSR+VENNMTRSAGKSFTKEGVKAMAKEAAKEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRKKVLWNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKLE  420
            G KFLLK+FR+KVL NMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTEDQKKIEQKRLEELYKSSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTE+QKKIEQKRLEELYK+SGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GCRA  484
            G RA
Sbjct  481  GYRA  484

33) CFSAN001992_04590 in NC_020307


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  657 bits (2484),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 464/484 (96%), Positives = 477/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNNDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSN+DSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFLKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESF KQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVMANEMAEESAEFSREVENNMTRSAGKSFTkegvkamakaaakealekyaqe  360
            FEPLEREM MANEMAEE+AEFSR+VENNMTRSAGKSFTKEGVKAMAK AAKEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKNFRKKVLWNMFQKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKLE  420
            GGKFLLK+FR+KVL NMF+KILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTEDQKKIEQKRLEELYKSSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTE+QKKIEQKRLEELYK+SGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GCRA  484
            G RA
Sbjct  481  GYRA  484

34) sseC in NC_012125


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  654 bits (2471),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 461/484 (96%), Positives = 475/484 (99%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+LIL+VFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNVLRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQN LR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgageaeieelaekfgeeVSESFLKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESF KQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEPLEREMVIANEMAEESAEFSREVENNMTRSAGKSFTkegvkamakeaakealekyaqe  360
            FEPLEREM +ANEMAEE+AEFSR+VENNMTRSAGKSFTKEGVKAMAKEAAKEALEK  QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GEKFLLKNFRKKVLWNMFKKILYALLRDCSFKGLQTIRCATEGASQMNTGMVNTEKAKLE  420
            G KFLLK+FR+KVL NMFKKILYALLRDCSFKGLQ+IRCATEGASQMNTGMVNTEKAK+E
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTEDQKKIEQKRLEELYKSSGAALRDVLDTIDHYSSAQARIA  480
            KKIEQLITQQRFLDFIMQQTE+QKKIEQKRLEELYK+SGAALRDVLDTIDHYSS QARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GCRA  484
            G RA
Sbjct  481  GYRA  484

35) CFSAN002050_13395 in NC_021818


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  651 bits (2459),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 456/484 (95%), Positives = 472/484 (98%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNATSLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNA+ LLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGNHKRPSLPDFLHINPTVLSMMMTTLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPGNHKRPSLPDFL+ NP+VLSMMMT+LILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIVVASKIQVGCEVVAMALD  240
            GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAII V+SKIQ GCE VA+ALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMATRGLSGAAAKVLDSGLGEEMVERMVgagegeieelaekfgeeVSENFSKQ  300
            VFQIGRAFMATRGLSGAAAKVLDSG+GEE+VERMVGAGE+EIEELAEKFGEEVSE+FSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEAIEREMVSPGEMEEESAEFSRKVENNMTRSAGKSFTkegvkamakeaakealekcaqe  360
            FE++EREM  + EM EE+AEFSR+VENNMTRSAGKSFTKEGVKAMAKEAAKEALEKC QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKNFRNKVLWNMFKKILYALLSDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420
            GGKFLLK+FRNKVL NMFKKILYALL DCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GYRA  484
            GYRA
Sbjct  481  GYRA  484

36) SeAg_B1773 in NC_011149


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  648 bits (2451),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 456/484 (95%), Positives = 473/484 (98%), Gaps = 0/484 (0%)

Query  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60
            MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ
Sbjct  1    MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQ  60

Query  61   EASNALKQLLDAVPGDHKRPSLPDFLQTNPAVLSMMMTTLILNVFGNNAQSLCQQLERAT  120
            EASNALKQLLDAVPG+HKRPSLPDFLQTNPAVLSMMMT+LILNVFGNNAQSLCQQLERAT
Sbjct  61   EASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERAT  120

Query  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWLTGIFETVIGALKVVEGFLS  180
            EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDW+TGIFETVIGALKVVEGFLS
Sbjct  121  EVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLS  180

Query  181  GNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVASKIQVGCEVVAMALD  240
            GNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQAIIDV+SKIQ GCE VA+ALD
Sbjct  181  GNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD  240

Query  241  VFQIGRAFMETRGLSGAAAKVLDSGLGEEMVERMVgagegeieelaekfgeeVSENFSKQ  300
            VFQIGRAFM TRGLSGAAAKVLDSG+GEE+VERMVGAGE+EIEELAEKFGEEVSE+FSKQ
Sbjct  241  VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ  300

Query  301  FEAIEREMVSPGEMEEESAEFSRKVENNMTRSAGKSFTkegvkamakeaakealekcaqe  360
            FE++EREM  + EM EE+AEFSR+VENNMTRSAGKSFTKEGVKAMAKEAAKEALEKC QE
Sbjct  301  FEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQE  360

Query  361  GGKFLLKNFRNKVLWNMFKKILYALLSDCSFKGLQAIRCATEGANQMNTGMVNTEKAKIE  420
            GGKFLLK+FRNKVL NMFKKILYALL DCSFKGLQAIRCATEGA+QMNTGMVNTEKAKIE
Sbjct  361  GGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIE  420

Query  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480
            KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA
Sbjct  421  KKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA  480

Query  481  GCRA  484
            G RA
Sbjct  481  GYRA  484

37) sseC in NC_017046


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  618 bits (2334),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 444/445 (99%), Positives = 445/445 (100%), Gaps = 0/445 (0%)

Query  1    MNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTS  60
            +NSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTS
Sbjct  40   VNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTS  99

Query  61   LILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFD  120
            LILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFD
Sbjct  100  LILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFD  159

Query  121  WITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQ  180
            WITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQ
Sbjct  160  WITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQ  219

Query  181  AIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgage  240
            AIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGE
Sbjct  220  AIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGE  279

Query  241  aeieelaekfgeeVSESFSKQFEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTk  300
            AEIEELAEKFGEEVSESFSKQFEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTK
Sbjct  280  AEIEELAEKFGEEVSESFSKQFEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTK  339

Query  301  egvkamakeaakealekCVQEGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRC  360
            EGVKAMAKEAAKEALEKCVQEGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRC
Sbjct  340  EGVKAMAKEAAKEALEKCVQEGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRC  399

Query  361  ATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSG  420
            ATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSG
Sbjct  400  ATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSG  459

Query  421  AALRDVLDTIDHYSSVQARIAGYRA  445
            AALRDVLDTIDHYSSVQARIAGYRA
Sbjct  460  AALRDVLDTIDHYSSVQARIAGYRA  484

38) SN31241_24700 in NC_021902


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  614 bits (2321),  Expect = 2e-177, Method: Compositional matrix adjust.
 Identities = 439/445 (99%), Positives = 445/445 (100%), Gaps = 0/445 (0%)

Query  1    MNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTT  60
            +NSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSM+MT+
Sbjct  40   VNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTS  99

Query  61   LILSVFGNNAQSLCQQLERATEVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFD  120
            LIL+VFGNNAQSLCQQLERATEVQNALR+KQVKEYQEQIQKAIEQEDKARKAGIFGAIFD
Sbjct  100  LILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFD  159

Query  121  WITGIFETVIGALKVVEGFLSGNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQ  180
            WITGIFETVIGALKVVEGFLSGNPAEMASGVAY+AAGCAGMVKAGAETAMMCGADHDTCQ
Sbjct  160  WITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQ  219

Query  181  AIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVgage  240
            AIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGE
Sbjct  220  AIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGE  279

Query  241  aeieelaekfgeeVSESFSKQFEPLERemamanemaeeaaeFSRNVENNMTRSAGKSFTk  300
            AEIEELAEKFGEEVSESFSKQFEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTK
Sbjct  280  AEIEELAEKFGEEVSESFSKQFEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTK  339

Query  301  egvkamakeaakealekCVQEGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRC  360
            EGVKAMAKEAAKEALEKCVQEGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRC
Sbjct  340  EGVKAMAKEAAKEALEKCVQEGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRC  399

Query  361  ATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSG  420
            ATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSG
Sbjct  400  ATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSG  459

Query  421  AALRDVLDTIDHYSSVQARIAGYRA  445
            AALRDVLDTIDHYSSVQARIAGYRA
Sbjct  460  AALRDVLDTIDHYSSVQARIAGYRA  484

39) SARI_01581 in NC_010067


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  519 bits (1959),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 347/442 (79%), Positives = 402/442 (91%), Gaps = 0/442 (0%)

Query  4    AFGNGNAMCAVTRKISLQEANNALKKLLDAVPGNHKSPPLPDFLRINPTVLSMMMTILIL  63
            +FG+GNA C ++ KISLQEA+NALK+LLDAVPGNHK P+LPDFL+ NP+VLSMMMT LIL
Sbjct  43   TFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMMMTSLIL  102

Query  64   NVFGSSAQSLCQQLERATEVQNTLRDKQVKEYQEQIQKAIEQADKARKAGIFGAIFDWIT  123
            NVFG++AQSLCQQLERATEVQN+LR+KQVKEYQEQIQKAIEQ DKARKAGIFGAIFDWIT
Sbjct  103  NVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWIT  162

Query  124  GIFETVIGAFKVVEGFLSDNPVEMASGVAYMAAGCAGMVKAGAETAMLFGADPDTCKAII  183
            GIFETVIGA+KVVEGFLS+NP EMASGVAYMAAGCAGMVKAGAETAM+ GAD DTC+AII
Sbjct  163  GIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAII  222

Query  184  NVTSKIQLGCEIVALALDVIQIGRAFMATRALSGAAEKVLDSGFGEELAERMAGAGEEEI  243
            +VTSKIQ+GCE VALALDV+QIGRAFMATR+LSGAA KVLDSGFGEE+ ERM GAGE EI
Sbjct  223  DVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEI  282

Query  244  DALAEEFGRQVSENFSRQFESFDRemvelgemeeesaeFSRTAEKNMTRRAGKSFTkegv  303
            + LAE FG +VSE+FS+QFE+++REM    EM EE+AEFSR  E+NMTR AGKSFTKEGV
Sbjct  283  EELAEKFGEEVSESFSKQFEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGV  342

Query  304  kamvkeaakealekcaqeGEKFLLKNIRKQILVNVFKKIMSALLRDCSCKSLQAIRCATE  363
            KAM KEAAKEALEKC QEG KFLLK++R+++L N+FKKI+ ALLRDCS K+LQAIRCATE
Sbjct  343  KAMAKEAAKEALEKCVQEGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATE  402

Query  364  GGNQTNAGVIKTEKAKLEKKIEQLIARQQFQDFIMEQMEGQKKMEQKRLQALYKGSGAAL  423
            G++Q N+G+++TEKAK+EKKIEQLI++Q+F DFIM+Q E QKK+EQKRL+ LYKGSGAAL
Sbjct  403  GASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAAL  462

Query  424  KDTLDIIDDYSSVQAKIAGWRA  445
            +D LD ID+YSSVQA+IAG RA
Sbjct  463  RDVLDTIDHYSSVQARIAGYRA  484

40) YE105_C0318 in NC_015224


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  214 bits (795),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 165/406 (41%), Positives = 274/406 (68%), Gaps = 4/406 (0%)

Query  79   RLSLDNPGETDIQLIMSMVSSLNLGLFSNLCKSISQQMERATDVQTFLRDKRVAEYQQQI  138
            R SL +  +T+  ++  M++SL L +F+N  +S+ QQ+ERAT+VQ  LR+K+V EYQ+QI
Sbjct  79   RPSLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQI  138

Query  139  DKAVEQADKAKKAGIFTAVFDWIVGAVEVVYGALKVAEGVLTGDPLAIASGVAYlaagta  198
            +KA+EQ DKA+KAGIF A+FDWI G  E V GALKV EG L+G+P  +ASGVAY+AAG A
Sbjct  139  QKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCA  198

Query  199  glvkaaaETAMLLGASKEKCQEVIDVAGKVQLGCECFAMAIDIFQAARAINAARTVTKGA  258
            G+VKA+AETAM+ GA  + CQ +IDV++K+Q+GCE  A+A+D+FQ +RA+ A+R ++ +A
Sbjct  199  GMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAA  258

Query  259  SEVLKSGASEALSDAIKRGASGEIEQLAEKFGKDVSQQVSRNISLNVMETEMVEVGNMTS  318
            + VL SG +E + + +  ++ +EIE+LAEKFG +VS+  S++  ++ +E EM    +M+ 
Sbjct  259  AKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQ--FEPLEREMAMANEMAE  316

Query  319  aaakqaakaEIALVRNITKSFTHEGIEKLVGGVAKKLAQDAIKKGITLTAEQFSQQCVKA  378
             AA  + + E  + R+  KSFT EG+  +    AK   +  ++ G  +   +F ++ +  
Sbjct  317  EAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQEGGKFLLKKFRNKVLFN  376

Query  379  IMKKSVTTILKDIATSPLLIMQKC-TAAAGQVNSGQLAIQSANLRKEIEKLILDQDFTQF  437
            + KK + ++L+D +   L  + +C T +A+Q+N+G +  + A++ K IE+LI +Q F +F
Sbjct  377  MFKKILYALLRDCSFKGLQAI-RCATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDF  435

Query  438  MDEWVERNKQHQLKQLKDTSEAAQDTVTKLSDNIKQNSMLQTQIAG  483
            + +  E +K+ + K+L +   ++  ++  + D I + S +Q++IAG
Sbjct  436  IMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIAG  481

41) Y11_35261 in NC_017564


> AF020808|6|G6|3377864|AAC28881.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344|+|2154..3608|sseC|-|SseC
Length=484

 Score =  213 bits (794),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 161/389 (42%), Positives = 265/389 (69%), Gaps = 4/389 (1%)

Query  96   MVSSLNLGLFSNLCKSISQQMERATDVQTFLRDKRVAEYQQQIDKAVEQADKAKKAGIFT  155
            M++SL L +F+N  +S+ QQ+ERAT+VQ  LR+K+V EYQ+QI+KA+EQ DKA+KAGIF 
Sbjct  96   MMTSLILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFG  155

Query  156  AVFDWIVGAVEVVYGALKVAEGVLTGDPLAIASGVAYlaagtaglvkaaaETAMLLGASK  215
            A+FDWI G  E V GALKV EG L+G+P  +ASGVAY+AAG AG+VKA+AETAM+ GA  
Sbjct  156  AIFDWITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADH  215

Query  216  EKCQEVIDVAGKVQLGCECFAMAIDIFQAARAINAARTVTKGASEVLKSGASEALTDAIK  275
            + CQ +IDV++K+Q+GCE  A+A+D+FQ +RA+ A+R ++ +A+ VL SG +E + + + 
Sbjct  216  DTCQAIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMV  275

Query  276  RGASGEIEQLAEKFGKDVSQQVSRNISLNVMETEMVEVGNMTSaaakqaakaEIALVRNI  335
             ++ +EIE+LAEKFG +VS+  S++  ++ +E EM    +M+  AA  + + E  + R+ 
Sbjct  276  GAGEAEIEELAEKFGEEVSESFSKQ--FEPLEREMAMANEMAEEAAEFSRNVENNMTRSA  333

Query  336  TKSFTHEGIEKLVGGVAKKLAQDAIKKGITLTAEQFSQQCVKAIMKKSVTTILKDIATSP  395
             KSFT EG+  +    AK   +  ++ G  +   +F ++ +  + KK + ++L+D +   
Sbjct  334  GKSFTKEGVKAMAKEAAKEALEKCVQEGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKG  393

Query  396  LLIMQKC-TAAAGQVNSGQLAIQSANLRKEIEKLILDQDFTQFMDEWVERNKQHQLKQLK  454
            L  + +C T +A+Q+N+G +  + A++ K IE+LI +Q F +F+ +  E +K+ + K+L 
Sbjct  394  LQAI-RCATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLE  452

Query  455  DTSEAAQDTVTKLSDNIKQNSMLQTQIAG  483
            +   ++  ++  + D I + S +Q++IAG
Sbjct  453  ELYKGSGAALRDVLDTIDHYSSVQARIAG  481