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Homologs of gtrBI gene of AF139596

820

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EcDH1_1307
( YP_006091269.1 )

Ribonuclease III

NC_017625
(Escherichia coli DH1)

3e-133

2) yfdH
( YP_006129689.1 )

CPS-53 (KpLE1) prophage; bactoprenol glucosyltransferase

NC_017638
(Escherichia coli DH1)

3e-133

3) yfdH
( YP_001731286.1 )

CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase

NC_010473
(Escherichia coli K-12)

3e-133

4) yfdH
( YP_002927319.1 )

CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase

NC_012759
(Escherichia coli K-12)

3e-133

5) yfdH
( YP_490592.1 )

bactoprenol glucosyl transferase

NC_007779
(Escherichia coli K-12)

3e-133

6) gtrB
( NP_416852.1 )

CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase

NC_000913
(Escherichia coli K12)

3e-133

7) gtrBI
( NP_836042.1 )

bactoprenol glucosyl transferase

NC_004741
(Shigella flexneri 2457T)

4e-129

8) gtrBI
( NP_706258.1 )

bactoprenol glucosyl transferase

NC_004337
(Shigella flexneri 301)

4e-129

9) gtrB
( YP_687838.1 )

bactoprenol glucosyl transferase

NC_008258
(Shigella flexneri 8401)

2e-128

10) SFxv_0355
( YP_005725988.1 )

Bactoprenol glucosyl transferase

NC_017328
(Shigella flexneri 2002017)

3e-127

11) SEEB0189_16490
( YP_008309593.1 )

bactoprenol glucosyl transferase

NC_021844
(Salmonella enterica CFSAN000189)

1e-121

12) yfdH
( YP_002381813.1 )

bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

NC_011740
(Escherichia fergusonii ATCC 35469)

8e-122

13) SEEB0189_16520
( YP_008309599.1 )

bactoprenol glucosyl transferase

NC_021844
(Salmonella enterica CFSAN000189)

1e-121

14) yfdH
( YP_002636197.1 )

glycosyltransferase

NC_012125
(Salmonella enterica RKS4594)

2e-121

15) SBOV05121
( YP_008504392.1 )

glycosyl transferase

NC_022241
(Salmonella enterica 3114)

2e-121

16) SNSL254_A0608
( YP_002039798.1 )

glycosyl transferase

NC_011080
(Salmonella enterica SL254)

2e-121

17) SN31241_15600
( YP_008359477.1 )

Bactoprenol glucosyl transferase

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-121

18) gtrB
( YP_215356.1 )

bactoprenol glucosyl transferase

NC_006905
(Salmonella enterica SC-B67)

3e-121

19) yfdH
( YP_002636190.1 )

glycosyltransferase

NC_012125
(Salmonella enterica RKS4594)

5e-121

20) yfdH
( YP_215580.1 )

glycosyltransferase

NC_006905
(Salmonella enterica SC-B67)

6e-121

21) yfdH
( YP_215583.1 )

glycosyltransferase

NC_006905
(Salmonella enterica SC-B67)

7e-121

22) CKO_01844
( YP_001453407.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

1e-120

23) CFSAN002050_09405
( YP_008259812.1 )

bactoprenol glucosyl transferase

NC_021818
(Salmonella enterica CFSAN002050)

1e-120

24) Entas_2654
( YP_004829167.1 )

family 2 glycosyl transferase

NC_015968
(Enterobacter asburiae LF7a)

1e-120

25) gtrB
( YP_003537386.1 )

phage-encoded bactoprenol glucosyl transferase

NC_013971
(Erwinia amylovora ATCC 49946)

4e-120

26) gtrB3
( YP_003532664.1 )

bactoprenol glucosyl transferase

NC_013961
(Erwinia amylovora CFBP1430)

4e-120

27) yfdH
( YP_003210831.1 )

bactoprenol glucosyl transferase from prophage CPS-53

NC_013282
(Cronobacter turicensis z3032)

1e-119

28) yfdH
( YP_002411667.1 )

bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

NC_011751
(Escherichia coli UMN026)

4e-119

29) ES15_1693
( YP_006342777.1 )

bactoprenol glucosyl transferase

NC_017933
(Cronobacter sakazakii ES15)

1e-118

30) gtrB
( YP_006095176.1 )

phage-encoded bactoprenol glucosyl transferase

NC_017626
(Escherichia coli 042)

8e-119

31) ESA_03027
( YP_001439092.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

9e-119

32) ECL_03179
( YP_003613663.1 )

bactoprenol glucosyl transferase

NC_014121
(Enterobacter cloacae ATCC 13047)

5e-118

33) ECENHK_05585
( YP_006577628.1 )

family 2 glycosyl transferase

NC_018405
(Enterobacter cloacae ENHKU01)

2e-117

34) SeD_A0659
( YP_002214560.1 )

bactoprenol glucosyl transferase

NC_011205
(Salmonella enterica CT_02021853)

2e-116

35) SeAg_B4458
( YP_002149115.1 )

bactoprenol glucosyl transferase

NC_011149
(Salmonella enterica SL483)

2e-116

36) SEEH1578_07185
( YP_008245508.1 )

Bactoprenol glucosyl transferase GtrB

NC_021810
(Salmonella enterica 41578)

3e-116

37) SU5_0279
( YP_006085930.1 )

Bactoprenol glucosyl transferase GtrB

NC_017623
(Salmonella enterica B182)

3e-116

38) CFSAN002069_11085
( YP_008251029.1 )

bactoprenol glucosyl transferase

NC_021812
(Salmonella enterica CFSAN002069)

3e-116

39) SeHA_C4542
( YP_002048191.1 )

bactoprenol glucosyl transferase

NC_011083
(Salmonella enterica SL476)

3e-116

40) SE451236_04050
( YP_008263877.1 )

bactoprenol glucosyl transferase

NC_021820
(Salmonella enterica 08-1736)

7e-116

41) STM14_5055
( YP_005240491.1 )

putative phage glycosyltransferase

NC_016856
(Salmonella enterica 14028S)

7e-116

42) gtrB
( YP_005399475.1 )

phage glycosyl transferase

NC_017046
(Salmonella enterica 798)

7e-116

43) CFSAN001921_19400
( YP_008257210.1 )

bactoprenol glucosyl transferase

NC_021814
(Salmonella enterica CFSAN001921)

7e-116

44) STMMW_41541
( YP_005235157.1 )

putative phage glycosyl transferase

NC_016854
(Salmonella enterica D23580)

7e-116

45) STM4205
( NP_463070.1 )

phage glycosyltransferase

NC_003197
(Salmonella enterica LT2)

7e-116

46) gtrB
( YP_005184006.1 )

putative phage glycosyl transferase

NC_016810
(Salmonella enterica SL1344)

7e-116

47) STM474_4397
( YP_005245171.1 )

putative phage glycosyltransferase

NC_016857
(Salmonella enterica ST4/74)

7e-116

48) STMDT12_C43380
( YP_005250034.1 )

putative phage glycosyltransferase

NC_016860
(Salmonella enterica T000240)

7e-116

49) STU288_21110
( YP_007905303.1 )

phage glycosyl transferase

NC_021151
(Salmonella enterica U288)

7e-116

50) STMUK_4189
( YP_005254637.1 )

putative phage glycosyltransferase

NC_016863
(Salmonella enterica UK-1)

7e-116

51) CFSAN002050_03845
( YP_008258725.1 )

bactoprenol glucosyl transferase

NC_021818
(Salmonella enterica CFSAN002050)

3e-115

52) SNSL254_A4543
( YP_002043451.1 )

bactoprenol glucosyl transferase

NC_011080
(Salmonella enterica SL254)

3e-115

53) SN31241_5180
( YP_008358436.1 )

Bactoprenol glucosyl transferase

NC_021902
(Salmonella enterica USMARC-S3124.1)

3e-115

54) SPC_4265
( YP_002639769.1 )

phage glycosyltransferase

NC_012125
(Salmonella enterica RKS4594)

4e-115

55) gtrB
( YP_219071.1 )

phage glycosyltransferase

NC_006905
(Salmonella enterica SC-B67)

4e-115

56) SE451236_08810
( YP_008264807.1 )

bactoprenol glucosyl transferase

NC_021820
(Salmonella enterica 08-1736)

4e-114

57) yfdH
( YP_005236262.1 )

putative glycosyltransferase

NC_016856
(Salmonella enterica 14028S)

4e-114

58) SEEH1578_12220
( YP_008246509.1 )

bactoprenol glucosyl transferase

NC_021810
(Salmonella enterica 41578)

4e-114

59) gtrB
( YP_005396049.1 )

bactoprenol glucosyl transferase

NC_017046
(Salmonella enterica 798)

4e-114

60) CFSAN001921_14245
( YP_008256202.1 )

bactoprenol glucosyl transferase

NC_021814
(Salmonella enterica CFSAN001921)

4e-114

61) CFSAN002069_06055
( YP_008250051.1 )

bactoprenol glucosyl transferase

NC_021812
(Salmonella enterica CFSAN002069)

4e-114

62) STMMW_06241
( YP_005231687.1 )

bactoprenol glucosyl transferase

NC_016854
(Salmonella enterica D23580)

4e-114

63) yfdH
( NP_459551.1 )

glycosyltransferase

NC_003197
(Salmonella enterica LT2)

4e-114

64) gtrB
( YP_005180471.1 )

bactoprenol glucosyl transferase

NC_016810
(Salmonella enterica SL1344)

4e-114

65) SeHA_C0668
( YP_002044591.1 )

bactoprenol glucosyl transferase

NC_011083
(Salmonella enterica SL476)

4e-114

66) yfdH
( YP_005241504.1 )

putative glycosyltransferase

NC_016857
(Salmonella enterica ST4/74)

4e-114

67) STMDT12_C06200
( YP_005246316.1 )

bactoprenol glucosyl transferase

NC_016860
(Salmonella enterica T000240)

4e-114

68) STU288_11585
( YP_007903416.1 )

bactoprenol glucosyl transferase

NC_021151
(Salmonella enterica U288)

4e-114

69) yfdH
( YP_005251122.1 )

putative glycosyltransferase

NC_016863
(Salmonella enterica UK-1)

4e-114

70) CFSAN001992_08505
( YP_007471449.1 )

bactoprenol glucosyl transferase

NC_020307
(Salmonella enterica CFSAN001992)

5e-114

71) SSPA2017
( YP_002142855.1 )

bactoprenol glucosyltransferase

NC_011147
(Salmonella enterica AKU12601)

6e-114

72) gtrB
( YP_151372.1 )

bactoprenol glucosyltransferase

NC_006511
(Salmonella enterica ATCC 9150)

6e-114

73) gtrB
( NP_455143.1 )

bactoprenol glucosyl transferase

NC_003198
(Salmonella enterica CT18)

6e-114

74) STBHUCCB_24400
( YP_005217962.1 )

Bactoprenol glucosyl transferase

NC_016832
(Salmonella enterica P-stx-12)

6e-114

75) yfdH
( YP_002242684.1 )

bactoprenol glucosyl transferase

NC_011294
(Salmonella enterica P125109)

6e-114

76) I137_10950
( YP_008381628.1 )

bactoprenol glucosyl transferase

NC_021984
(Salmonella enterica S06004)

6e-114

77) gtrB
( NP_806043.1 )

bactoprenol glucosyltransferase

NC_004631
(Salmonella enterica Ty2)

6e-114

78) TY21A_11690
( YP_007926606.1 )

bactoprenol glucosyltransferase

NC_021176
(Salmonella enterica Ty21a)

6e-114

79) SeSA_A0724
( YP_002113684.1 )

bactoprenol glucosyl transferase

NC_011094
(Salmonella enterica CVM19633)

1e-113

80) SeAg_B0603
( YP_002145538.1 )

bactoprenol glucosyl transferase

NC_011149
(Salmonella enterica SL483)

1e-113

81) yfdH
( YP_005933262.1 )

bactoprenol glucosyl transferase from prophage CPS-53 YfdH

NC_017531
(Pantoea ananatis AJ13355)

1e-113

82) yfdH
( YP_003519362.1 )

hypothetical protein

NC_013956
(Pantoea ananatis LMG 20103)

1e-113

83) SBOV42801
( YP_008508064.1 )

bactoprenol glucosyl transferase

NC_022241
(Salmonella enterica 3114)

1e-113

84) SU5_01248
( YP_006086889.1 )

Polymyxin resistance protein ArnC

NC_017623
(Salmonella enterica B182)

3e-113

85) SSPA2225
( YP_002143063.1 )

O-antigen conversion: bactoprenyl transferase

NC_011147
(Salmonella enterica AKU12601)

7e-113

86) SPA2386
( YP_151579.1 )

O-antigen conversion: bactoprenyl transferase

NC_006511
(Salmonella enterica ATCC 9150)

7e-113

87) SPAB_03003
( YP_001589200.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

8e-113

88) yfdH
( YP_002225657.1 )

bactoprenol glucosyl transferase

NC_011274
(Salmonella enterica 287/91)

9e-113

89) yfdH
( YP_008482001.1 )

bactoprenol glucosyl transferase

NC_022221
(Salmonella enterica CDC1983-67)

9e-113

90) yfdH
( YP_005213544.1 )

bactoprenol glucosyl transferase

NC_016831
(Salmonella enterica RKS5078)

9e-113

91) SeD_A0655
( YP_002214557.1 )

bactoprenol glucosyl transferase

NC_011205
(Salmonella enterica CT_02021853)

2e-112

92) I137_12060
( YP_008381834.1 )

bactoprenol glucosyl transferase

NC_021984
(Salmonella enterica S06004)

2e-112

93) STMDT12_C03860
( YP_005246082.1 )

bactoprenol glucosyl transferase

NC_016860
(Salmonella enterica T000240)

2e-112

94) STU288_12785
( YP_007903650.1 )

bactoprenol glucosyl transferase

NC_021151
(Salmonella enterica U288)

2e-112

95) SEEH1578_11020
( YP_008246271.1 )

Polymyxin resistance protein ArnC

NC_021810
(Salmonella enterica 41578)

3e-112

96) SU5_01018
( YP_006086661.1 )

Polymyxin resistance protein ArnC

NC_017623
(Salmonella enterica B182)

3e-112

97) CFSAN002069_07215
( YP_008250281.1 )

bactoprenol glucosyl transferase

NC_021812
(Salmonella enterica CFSAN002069)

3e-112

98) SeHA_C0415
( YP_002044356.1 )

bactoprenol glucosyl transferase

NC_011083
(Salmonella enterica SL476)

3e-112

99) Pat9b_2559
( YP_004116415.1 )

family 2 glycosyl transferase

NC_014837
(Pantoea sp. At-9b)

1e-107

100) gtrb1
( YP_003931092.1 )

bactoprenol glucosyl transferase

NC_014562
(Pantoea vagans C9-1)

8e-106

101) SG0299
( YP_453979.1 )

bactoprenol glucosyl transferase

NC_007712
(Sodalis glossinidius morsitans)

2e-105

102) Dd703_0125
( YP_002985766.1 )

family 2 glycosyl transferase

NC_012880
(Dickeya dadantii Ech703)

1e-104

103) gtrb3
( YP_003931416.1 )

bactoprenol glucosyl transferase

NC_014562
(Pantoea vagans C9-1)

7e-104

104) EAM_0959
( YP_003538047.1 )

bactoprenol glucosyl transferase

NC_013971
(Erwinia amylovora ATCC 49946)

6e-103

105) gtrB1
( YP_003530309.1 )

bactoprenol glucosyl transferase

NC_013961
(Erwinia amylovora CFBP1430)

6e-103

106) wcaA
( YP_087856.1 )

WcaA protein

NC_006300
(Mannheimia succiniciproducens MBEL55E)

6e-101

107) yfdH
( YP_263935.1 )

glycosyl transferase family protein

NC_007204
(Psychrobacter arcticus 273-4)

1e-97

108) ambt_10495
( YP_004467425.1 )

bactoprenol glucosyl transferase

NC_015554
(Alteromonas sp. SN2)

1e-97

109) ETAC_08880
( YP_007629257.1 )

glycosyltransferase

NC_020796
(Edwardsiella tarda C07-087)

2e-90

110) yfdH
( YP_003295992.1 )

glycosyltransferase

NC_013508
(Edwardsiella tarda EIB202)

2e-90

111) PputW619_0863
( YP_001747737.1 )

ribonuclease III

NC_010501
(Pseudomonas putida W619)

2e-77

112) PputUW4_01006
( YP_007028018.1 )

bactoprenol glucosyl transferase

NC_019670
(Pseudomonas sp. UW4)

6e-77

113) HRM2_29910
( YP_002604238.1 )

putative glycosyltransferase

NC_012108
(Desulfobacterium autotrophicum HRM2)

2e-76

114) Entcl_1659
( YP_003941203.1 )

family 2 glycosyl transferase

NC_014618
(Enterobacter cloacae SCF1)

5e-76

115) L483_06440
( YP_008093112.1 )

bactoprenol glucosyl transferase

NC_021491
(Pseudomonas putida H8234)

6e-75

116) TERTU_0854
( YP_003072463.1 )

glycosyltransferase family 2 domain-containing protein

NC_012997
(Teredinibacter turnerae T7901)

6e-75

117) Ddes_2219
( YP_002480793.1 )

family 2 glycosyl transferase

NC_011883
(Desulfovibrio desulfuricans ATCC 27774)

7e-73

118) Thicy_1418
( YP_004537659.1 )

family 2 glycosyl transferase

NC_015581
(Thioalkalimicrobium cyclicum ALM1)

3e-72

119) gtrB
( YP_003753335.1 )

bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

NC_014311
(Ralstonia solanacearum PSI07)

5e-71

120) gtrB
( YP_003746542.1 )

bactoprenol glucosyl transferase; cps-53 (kple1) prophage

NC_014307
(Ralstonia solanacearum CFBP2957)

1e-69

121) RSPO_c02721
( YP_006030550.1 )

lipid a biosynthesis protein (glycosyltransferase )

NC_017574
(Ralstonia solanacearum Po82)

1e-69

122) Sde_0135
( YP_525611.1 )

b-glycosyltransferase-like protein

NC_007912
(Saccharophagus degradans 2-40)

1e-69

123) Pfl01_1379
( YP_347111.1 )

glycosyl transferase family protein

NC_007492
(Pseudomonas fluorescens Pf0-1)

2e-69

124) Saut_1555
( YP_003892614.1 )

family 2 glycosyl transferase

NC_014506
(Sulfurimonas autotrophica DSM 16294)

3e-69

125) Tola_1122
( YP_002892334.1 )

family 2 glycosyl transferase

NC_012691
(Tolumonas auensis DSM 9187)

1e-68

126) HydHO_1541
( YP_007500890.1 )

glycosyl transferase family 2

NC_020411
(Hydrogenobaculum sp. HO)

2e-68

127) HydSN_1584
( YP_007647947.1 )

glycosyl transferase

NC_020814
(Hydrogenobaculum sp. SN)

2e-68

128) Dret_1173
( YP_003198039.1 )

family 2 glycosyl transferase

NC_013223
(Desulfohalobium retbaense DSM 5692)

4e-68

129) gtrB2
( YP_001353455.1 )

glucosyl transferase

NC_009659
(Janthinobacterium sp. Marseille)

8e-68

130) gtrB
( YP_582811.1 )

bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

NC_007973
(Cupriavidus metallidurans CH34)

3e-67

131) yfdH
( YP_007324303.1 )

bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

NC_020055
(Desulfovibrio hydrothermalis DSM 14728)

7e-67

132) Ple7327_4042
( YP_007082740.1 )

glycosyl transferase family protein

NC_019689
(Pleurocapsa minor PCC 7327)

7e-67

133) PSEBR_a1356
( YP_004352550.1 )

glycosyl transferase

NC_015379
(Pseudomonas brassicacearum NFM421)

9e-67

134) PCC7424_4457
( YP_002379689.1 )

family 2 glycosyl transferase

NC_011729
(Cyanothece sp. PCC 7424)

2e-66

135) NIES39_D06260
( YP_005068581.1 )

putative glycosyl transferase

NC_016640
(Arthrospira platensis NIES-39)

4e-66

136) HEAR1604
( YP_001099892.1 )

CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase

NC_009138
(Herminiimonas arsenicoxydans )

5e-66

137) Syn6312_3505
( YP_007063073.1 )

glycosyl transferase family protein

NC_019680
(Synechococcus sp. PCC 6312)

1e-65

138) Cyan10605_0680
( YP_007160862.1 )

family 2 glycosyl transferase

NC_019776
(Cyanobacterium aponinum PCC 10605)

9e-66

139) wcaA
( YP_001354046.1 )

cell wall biosynthesis glycosyltransferase

NC_009659
(Janthinobacterium sp. Marseille)

2e-65

140) CYB_1435
( YP_477666.1 )

glycosyl transferase family protein

NC_007776
(Synechococcus sp. JA-2-3B'a(2-13))

3e-65

141) Acife_2041
( YP_004784487.1 )

family 2 glycosyl transferase

NC_015942
(Acidithiobacillus ferrivorans SS3)

3e-65

142) HEAR0529
( YP_001098866.1 )

glucosyl transferase

NC_009138
(Herminiimonas arsenicoxydans )

3e-65

143) Mic7113_0490
( YP_007119814.1 )

glycosyl transferase family protein

NC_019738
(Microcoleus sp. PCC 7113)

4e-65

144) GbCGDNIH1_0717
( YP_744538.1 )

polyprenyl-phosphate beta-D-glucosyltransferase

NC_008343
(Granulibacter bethesdensis CGDNIH1)

2e-64

145) gtrB
( YP_004852519.1 )

cell wall biogenesis glycosyltransferase

NC_016010
(Xanthomonas axonopodis F1)

2e-64

146) CC_2889
( NP_421685.1 )

glycosyl transferase

NC_002696
(Caulobacter crescentus CB15)

3e-64

147) CCNA_02983
( YP_002518356.1 )

polyprenyl-phosphate beta-D-glucosyltransferase

NC_011916
(Caulobacter crescentus NA1000)

3e-64

148) gtrB
( YP_364914.1 )

bactoprenol glucosyltransferase

NC_007508
(Xanthomonas campestris 85-10)

3e-64

149) Cyan8802_4500
( YP_003140117.1 )

family 2 glycosyl transferase

NC_013161
(Cyanothece sp. PCC 8802)

7e-64

150) C380_03125
( YP_006852989.1 )

glycosyltransferase family 2 domain-containing protein

NC_018708
(Acidovorax sp. KKS102)

1e-63

151) OOM_0856
( YP_006316810.1 )

glycosyl transferase family protein

NC_017909
(Francisella noatunensis Toba 04)

1e-63

152) Fphi_1285
( YP_001678011.1 )

glycosyl transferase

NC_010336
(Francisella philomiragia ATCC 25017)

1e-63

153) gtrB1
( YP_001353418.1 )

glucosyl transferase

NC_009659
(Janthinobacterium sp. Marseille)

1e-63

154) PCC8801_4438
( YP_002374515.1 )

family 2 glycosyl transferase

NC_011726
(Cyanothece sp. PCC 8801)

2e-63

155) F7308_0918
( YP_004647445.1 )

glycosyl transferase

NC_015696
(Francisella sp. TX077308)

2e-63

156) Cyan7425_2174
( YP_002482896.1 )

family 2 glycosyl transferase

NC_011884
(Cyanothece sp. PCC 7425)

6e-63

157) B565_2988
( YP_004393640.1 )

family 2 glycosyl transferase

NC_015424
(Aeromonas veronii B565)

1e-62

158) AHA_1218
( YP_855759.1 )

bactoprenol glucosyl transferase

NC_008570
(Aeromonas hydrophila ATCC 7966)

2e-62

159) Fraau_2799
( YP_005378817.1 )

glycosyl transferase family protein

NC_017033
(Frateuria aurantia DSM 6220)

4e-62

160) AHML_06460
( YP_008042423.1 )

bactoprenol glucosyl transferase

NC_021290
(Aeromonas hydrophila ML09-119)

5e-62

161) SY1_17080
( YP_007827888.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021038
(Synergistetes bacterium SGP1)

5e-62

162) Swit_2876
( YP_001263366.1 )

glycosyl transferase family protein

NC_009511
(Sphingomonas wittichii RW1)

5e-62

163) XCR_3240
( YP_005638222.1 )

SfII prophage-derived bactoprenol glucosyl transferase

NC_017271
(Xanthomonas campestris 756C)

9e-62

164) ASA_1210
( YP_001141066.1 )

glycosyl transferase family protein

NC_009348
(Aeromonas salmonicida A449)

1e-61

165) gtrB
( YP_899027.1 )

glycosyl transferase family protein

NC_008601
(Francisella novicida U112)

2e-61

166) FN3523_1462
( YP_005824516.1 )

glycosyl transferase family protein

NC_017449
(Francisella novicida 3523)

2e-61

167) XC_1245
( YP_242334.1 )

glucosyl transferase

NC_007086
(Xanthomonas campestris 8004)

2e-61

168) gtrB
( NP_638211.1 )

glucosyl transferase

NC_003902
(Xanthomonas campestris ATCC 33913)

2e-61

169) xccb100_1291
( YP_001902697.1 )

bactoprenol glucosyltransferase

NC_010688
(Xanthomonas campestris B100)

2e-61

170) CYA_2466
( YP_475851.1 )

glycosyl transferase family protein

NC_007775
(Synechococcus sp. JA-3-3Ab)

3e-61

171) CPS_1863
( YP_268593.1 )

group 2 family glycosyl transferase

NC_003910
(Colwellia psychrerythraea 34H)

3e-61

172) XF0176
( NP_297469.1 )

sugar transferase

NC_002488
(Xylella fastidiosa 9a5c)

3e-61

173) Xfasm12_0149
( YP_001774816.1 )

glycosyl transferase family protein

NC_010513
(Xylella fastidiosa M12)

3e-61

174) FNFX1_1437
( YP_005826345.1 )

hypothetical protein

NC_017450
(Francisella novicida Fx1)

4e-61

175) GOX2128
( YP_192520.1 )

glycosyltransferase

NC_006677
(Gluconobacter oxydans 621H)

5e-61

176) Acry_0724
( YP_001233864.1 )

glycosyl transferase family protein

NC_009484
(Acidiphilium cryptum JF-5)

6e-61

177) gtrB
( YP_007011608.1 )

glycosyl transferase

NC_019551
(Francisella tularensis FSC200)

6e-61

178) FTL_0625
( YP_513381.1 )

glycosyl transferase family protein

NC_007880
(Francisella tularensis LVS)

6e-61

179) FTH_0628
( YP_763223.1 )

glycosyl transferase family protein

NC_008369
(Francisella tularensis OSU18)

6e-61

180) XfasM23_0132
( YP_001828863.1 )

glycosyl transferase family protein

NC_010577
(Xylella fastidiosa M23)

7e-61

181) ACMV_11480
( YP_004283377.1 )

putative glycosyltransferase

NC_015186
(Acidiphilium multivorum AIU301)

8e-61

182) XFLM_06000
( YP_006000502.1 )

glycosyl transferase family protein

NC_017562
(Xylella fastidiosa GB514)

8e-61

183) Daci_0561
( YP_001561592.1 )

glycosyl transferase family protein

NC_010002
(Delftia acidovorans SPH-1)

1e-60

184) DelCs14_0505
( YP_004485900.1 )

family 2 glycosyl transferase

NC_015563
(Delftia sp. Cs1-4)

1e-60

185) PD0144
( NP_778389.1 )

glycosyl transferase

NC_004556
(Xylella fastidiosa Temecula1)

8e-61

186) gtrB
( YP_001892073.1 )

glycosyl transferase family protein

NC_010677
(Francisella tularensis FSC147)

9e-61

187) gtrB
( YP_667506.1 )

glycosyl transferase family protein

NC_008245
(Francisella tularensis FSC 198)

1e-60

188) NE061598_07990
( YP_005831553.1 )

glycosyl transferase family protein

NC_017453
(Francisella tularensis NE061598)

1e-60

189) gtrB
( YP_170374.1 )

glycosyl transferase family protein

NC_006570
(Francisella tularensis SCHU S4)

1e-60

190) gtrB
( YP_005318499.1 )

glycosyl transferase family 2

NC_016937
(Francisella tularensis TI0902)

1e-60

191) gtrB
( YP_005306045.1 )

Glycosyl transferase family 2

NC_016933
(Francisella tularensis TIGB03)

1e-60

192) F92_03410
( YP_007008786.1 )

glycosyl transferase

NC_019537
(Francisella tularensis F92)

3e-60

193) FTA_0658
( YP_001428090.1 )

glycosyl transferase family protein

NC_009749
(Francisella tularensis FTNF002-00)

3e-60

194) FTW_0435
( YP_001121481.1 )

glycosyl transferase family protein

NC_009257
(Francisella tularensis WY96-3418)

3e-60

195) Csal_1246
( YP_573300.1 )

glycosyl transferase family protein

NC_007963
(Chromohalobacter salexigens DSM 3043)

4e-60

196) AFE_1776
( YP_002426194.1 )

glycosyl transferase family protein

NC_011761
(Acidithiobacillus ferrooxidans ATCC 23270)

5e-60

197) Lferr_1452
( YP_002219890.1 )

family 2 glycosyl transferase

NC_011206
(Acidithiobacillus ferrooxidans ATCC 53993)

1e-59

198) DSC_04930
( YP_004929680.1 )

family 2 glycosyl transferase

NC_016147
(Pseudoxanthomonas spadix BD-a59)

1e-59

199) AZKH_0687
( YP_007550004.1 )

glycosyltransferase family protein

NC_020516
(Azoarcus sp. KH32C)

2e-59

200) G432_09525
( YP_007616226.1 )

glycosyl transferase family protein

NC_020561
(Sphingomonas sp. MM-1)

3e-59

201) Fisuc_0402
( YP_003248496.1 )

family 2 glycosyl transferase

NC_013410
(Fibrobacter succinogenes S85)

3e-59

202) FSU_0817
( YP_005820907.1 )

O-antigen modification glycosyltransferase

NC_017448
(Fibrobacter succinogenes S85)

3e-59

203) yfdH
( YP_003456500.1 )

bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

NC_013861
(Legionella longbeachae NSW150)

4e-59

204) OG1RF_11706
( YP_005708763.1 )

group 2 glycosyl transferase

NC_017316
(Enterococcus faecalis OG1RF)

8e-59

205) gtrB
( YP_001973345.1 )

transmembrane glycosyl transferase

NC_010943
(Stenotrophomonas maltophilia K279a)

9e-59

206) Maqu_0288
( YP_957581.1 )

glycosyl transferase family protein

NC_008740
(Marinobacter aquaeolei VT8)

1e-58

207) EFS1_1765
( YP_007153557.1 )

undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, putative

NC_019770
(Enterococcus faecalis Symbioflor 1)

2e-58

208) mma_2834
( YP_001354524.1 )

hypothetical protein

NC_009659
(Janthinobacterium sp. Marseille)

2e-58

209) SL003B_0458
( YP_004302189.1 )

glycosyl transferase family protein

NC_015259
(Polymorphum gilvum SL003B-26A1)

3e-58

210) gtrB
( YP_006185896.1 )

glycosyltransferase

NC_017671
(Stenotrophomonas maltophilia D457)

3e-58

211) Cyan7822_3621
( YP_003888836.1 )

family 2 glycosyl transferase

NC_014501
(Cyanothece sp. PCC 7822)

4e-58

212) Smal_3057
( YP_002029439.1 )

family 2 glycosyl transferase

NC_011071
(Stenotrophomonas maltophilia R551-3)

5e-58

213) azo0749
( YP_932253.1 )

glycosyl transferase family protein

NC_008702
(Azoarcus sp. BH72)

6e-58

214) Atc_0126
( YP_004747477.1 )

glycosyl transferase family protein

NC_015850
(Acidithiobacillus caldus SM-1)

7e-58

215) Neut_0041
( YP_746296.1 )

glycosyl transferase

NC_008344
(Nitrosomonas eutropha C91)

1e-57

216) Psesu_0749
( YP_004145833.1 )

family 2 glycosyl transferase

NC_014924
(Pseudoxanthomonas suwonensis 11-1)

1e-57

217) DaAHT2_0384
( YP_003689709.1 )

glycosyl transferase family 2

NC_014216
(Desulfurivibrio alkaliphilus AHT2)

2e-57

218) BurJV3_3085
( YP_004793629.1 )

family 2 glycosyl transferase

NC_015947
(Stenotrophomonas maltophilia JV3)

2e-57

219) gtrB1
( YP_581777.1 )

glycosyltransferase

NC_007971
(Cupriavidus metallidurans CH34)

3e-57

220) PT7_2696
( YP_004417860.1 )

glycosyl transferase

NC_015458
(Pusillimonas sp. T7-7)

3e-57

221) gtrB
( YP_200448.1 )

glucosyl transferase

NC_006834
(Xanthomonas oryzae KACC10331)

3e-57

222) XOO_1710
( YP_450739.1 )

glucosyl transferase

NC_007705
(Xanthomonas oryzae MAFF 311018)

3e-57

223) PXO_01670
( YP_001914258.1 )

SfII prophage-derived bactoprenol glucosyl transferase

NC_010717
(Xanthomonas oryzae PXO99A)

3e-57

224) HP15_3970
( YP_005887662.1 )

glycosyl transferase family protein

NC_017506
(Marinobacter adhaerens HP15)

4e-57

225) Snov_4402
( YP_003696278.1 )

family 2 glycosyl transferase

NC_014217
(Starkeya novella DSM 506)

4e-57

226) Marme_1527
( YP_004312628.1 )

family 2 glycosyl transferase

NC_015276
(Marinomonas mediterranea MMB-1)

5e-57

227) gtrB2
( YP_581937.1 )

glycosyltransferase

NC_007971
(Cupriavidus metallidurans CH34)

1e-56

228) lp12_2470
( YP_005186813.1 )

glycosyltransferase, group 2 family protein (glycan biosynthesis)

NC_016811
(Legionella pneumophila ATCC 43290)

1e-56

229) yfdH
( YP_006506539.1 )

bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

NC_018139
(Legionella pneumophila Lorraine)

1e-56

230) lpg2478
( YP_096485.1 )

glycosyltransferase, group 2 family protein (glycan biosynthesis)

NC_002942
(Legionella pneumophila Philadelphia 1)

1e-56

231) LP6_2507
( YP_008064199.1 )

glycosyltransferase, group 2 family protein (glycan biosynthesis)

NC_021350
(Legionella pneumophila Thunder Bay)

1e-56

232) PSTAA_1233
( YP_005937885.1 )

bactoprenol glucosyl transferase

NC_017532
(Pseudomonas stutzeri DSM 4166)

6e-57

233) wcaA
( YP_003619811.1 )

glycosyltransferase, group 2 family protein

NC_014125
(Legionella pneumophila 2300/99 Alcoy)

8e-57

234) LPC_2000
( YP_001251276.1 )

glycosyltransferase

NC_009494
(Legionella pneumophila Corby)

8e-57

235) LPE509_00583
( YP_007567126.1 )

Glycosyl transferase, group 2 family protein

NC_020521
(Legionella pneumophila Philadelphia 1)

9e-57

236) Cseg_0951
( YP_003592074.1 )

family 2 glycosyl transferase

NC_014100
(Caulobacter segnis ATCC 21756)

2e-56

237) CAP2UW1_1386
( YP_003166639.1 )

family 2 glycosyl transferase

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

2e-56

238) MAE_40030
( YP_001659017.1 )

glycosyl transferase family protein

NC_010296
(Microcystis aeruginosa NIES-843)

2e-56

239) lpl2398
( YP_127728.1 )

hypothetical protein

NC_006369
(Legionella pneumophila Lens)

3e-56

240) MRBBS_1961
( YP_006558311.1 )

glycosyl transferases-like protein

NC_018268
(Marinobacter sp. BSs20148)

5e-56

241) gtrB
( YP_005428160.1 )

prophage-derived bactoprenol glucosyl transferase

NC_017067
(Marinobacter hydrocarbonoclasticus ATCC 49840)

5e-56

242) Rcas_0800
( YP_001430935.1 )

glycosyl transferase family protein

NC_009767
(Roseiflexus castenholzii DSM 13941)

8e-56

243) Bind_1650
( YP_001832770.1 )

glycosyl transferase family protein

NC_010581
(Beijerinckia indica ATCC 9039)

9e-56

244) Emin_0341
( YP_001875237.1 )

glycosyl transferase family protein

NC_010644
(Elusimicrobium minutum Pei191)

1e-55

245) yfdH
( YP_006509697.1 )

bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

NC_018140
(Legionella pneumophila HL06041035)

1e-55

246) lpp2543
( YP_124848.1 )

hypothetical protein

NC_006368
(Legionella pneumophila Paris)

1e-55

247) HEAR2596
( YP_001100839.1 )

bactoprenol glycosyl transferase

NC_009138
(Herminiimonas arsenicoxydans )

1e-55

248) Rfer_0771
( YP_522052.1 )

glycosyl transferase family protein

NC_007908
(Rhodoferax ferrireducens T118)

1e-55

249) HMPREF0833_10292
( YP_004621251.1 )

group 2 glycosyl transferase

NC_015678
(Streptococcus parasanguinis ATCC 15912)

2e-55

250) Tmz1t_3637
( YP_002890607.1 )

family 2 glycosyl transferase

NC_011662
(Thauera sp. MZ1T)

2e-55

251) PCC7424_2872
( YP_002378145.1 )

family 2 glycosyl transferase

NC_011729
(Cyanothece sp. PCC 7424)

2e-55

252) Mnod_5901
( YP_002501032.1 )

family 2 glycosyl transferase

NC_011894
(Methylobacterium nodulans ORS 2060)

2e-55

253) Cyan7822_3107
( YP_003888337.1 )

family 2 glycosyl transferase

NC_014501
(Cyanothece sp. PCC 7822)

2e-55

254) ANT_04660
( YP_004173100.1 )

putative glycosyltransferase

NC_014960
(Anaerolinea thermophila UNI-1)

3e-55

255) mnaA1
( YP_004374086.1 )

putative teichoic acid/polysaccharide glycosyl transferase

NC_015391
(Carnobacterium sp. 17-4)

4e-55

256) XAC29_15500
( YP_007637484.1 )

glucosyl transferase

NC_020800
(Xanthomonas axonopodis Xac29-1)

4e-55

257) wcaA
( YP_007651303.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_020815
(Xanthomonas citri Aw12879)

4e-55

258) BVU_1076
( YP_001298389.1 )

glycosyl transferase family protein

NC_009614
(Bacteroides vulgatus ATCC 8482)

4e-55

259) CV_1160
( NP_900830.1 )

glycosyl transferase

NC_005085
(Chromobacterium violaceum ATCC 12472)

4e-55

260) sll0501
( NP_442763.1 )

hypothetical protein

NC_000911
(Synechocystis sp. PCC 6803)

5e-55

261) sll0501
( YP_005384632.1 )

hypothetical protein

NC_017038
(Synechocystis sp. PCC 6803)

5e-55

262) sll0501
( YP_005387801.1 )

hypothetical protein

NC_017039
(Synechocystis sp. PCC 6803)

5e-55

263) sll0501
( YP_005410508.1 )

hypothetical protein

NC_017052
(Synechocystis sp. PCC 6803)

5e-55

264) sll0501
( YP_005652824.1 )

hypothetical protein

NC_017277
(Synechocystis sp. PCC 6803)

5e-55

265) MYO_128970
( YP_007452639.1 )

hypothetical protein

NC_020286
(Synechocystis sp. PCC 6803)

5e-55

266) gtrB
( NP_643355.1 )

glucosyl transferase

NC_003919
(Xanthomonas axonopodis 306)

5e-55

267) ykcC
( YP_003865679.1 )

glycosyltransferase

NC_014479
(Bacillus subtilis W23)

8e-55

268) Cyast_2467
( YP_007166060.1 )

family 2 glycosyl transferase

NC_019778
(Cyanobacterium stanieri PCC 7202)

1e-54

269) ykcC
( NP_389172.2 )

glycosyltransferase YkcC

NC_000964
(Bacillus subtilis 168)

1e-54

270) ykcC
( YP_007533235.1 )

putative glycosyltransferase YkcC

NC_020507
(Bacillus subtilis 6051-HGW)

1e-54

271) ykcC
( YP_006629468.1 )

glycosyltransferase

NC_018520
(Bacillus subtilis QB928)

1e-54

272) SGO_1019
( YP_001450308.1 )

glycosyl transferase family protein

NC_009785
(Streptococcus gordonii Challis)

1e-54

273) I653_06600
( YP_007662084.1 )

putative glycosyltransferase

NC_020832
(subtilis subtilis BAB-1)

1e-54

274) RHOM_12095
( YP_004839459.1 )

glycosyltransferase-like protein

NC_015977
(Roseburia hominis A2-183)

8e-55

275) ykcC
( YP_005560591.1 )

hypothetical protein

NC_017196
(Bacillus subtilis BEST195)

1e-54

276) APA386B_686
( YP_008391515.1 )

glycosyl transferase family 2

NC_021991
(Acetobacter pasteurianus 386B)

2e-54

277) APA01_17550
( YP_003188263.1 )

glycosyl transferase

NC_013209
(Acetobacter pasteurianus IFO 3283)

2e-54

278) APA03_17550
( YP_005478331.1 )

glycosyl transferase family protein

NC_017100
(Acetobacter pasteurianus IFO 3283)

2e-54

279) APA12_17550
( YP_005481495.1 )

glycosyl transferase family protein

NC_017108
(Acetobacter pasteurianus IFO 3283)

2e-54

280) APA32_17550
( YP_005484185.1 )

glycosyl transferase family protein

NC_017111
(Acetobacter pasteurianus IFO 3283)

2e-54

281) APA07_17550
( YP_005487470.1 )

glycosyl transferase family protein

NC_017121
(Acetobacter pasteurianus IFO 3283)

2e-54

282) APA22_17550
( YP_005490277.1 )

glycosyl transferase family protein

NC_017125
(Acetobacter pasteurianus IFO 3283)

2e-54

283) APA26_17550
( YP_005499379.1 )

glycosyl transferase family protein

NC_017146
(Acetobacter pasteurianus IFO 3283)

2e-54

284) APA42C_17550
( YP_005502177.1 )

glycosyl transferase family protein

NC_017150
(Acetobacter pasteurianus IFO 3283)

2e-54

285) MAE_03130
( YP_001655327.1 )

glycosyl transferase family protein

NC_010296
(Microcystis aeruginosa NIES-843)

2e-54

286) Aave_0599
( YP_968977.1 )

glycosyl transferase family protein

NC_008752
(Acidovorax citrulli AAC00-1)

2e-54

287) Spaf_0820
( YP_006309636.1 )

Glycosyltransferase

NC_017905
(Streptococcus parasanguinis FW213)

2e-54

288) AXYL_04675
( YP_003980704.1 )

bactoprenol glucosyl transferase

NC_014640
(Achromobacter xylosoxidans A8)

2e-54

289) Cylst_5009
( YP_007149740.1 )

glycosyl transferase

NC_019757
(Cylindrospermum stagnale PCC 7417)

2e-54

290) MY9_1412
( YP_006231205.1 )

glycosyl transferase family protein

NC_017743
(Bacillus sp. JS)

2e-54

291) BSn5_18465
( YP_004207326.1 )

putative glycosyltransferase

NC_014976
(Bacillus subtilis BSn5)

2e-54

292) A7A1_1432
( YP_007210012.1 )

Glycosyltransferase YkcC

NC_019896
(Bacillus subtilis BSP1)

2e-54

293) I33_1451
( YP_005556394.1 )

glycosyl transferase

NC_017195
(Bacillus subtilis RO-NN-1)

2e-54

294) MELS_1394
( YP_004766442.1 )

glycosyltransferase

NC_015873
(Megasphaera elsdenii DSM 20460)

2e-54

295) Cst_c14220
( YP_007373023.1 )

glycosyl transferase family 2

NC_020134
(Clostridium stercorarium DSM 8532)

2e-54

296) Clst_1372
( YP_007679451.1 )

glycosyltransferase

NC_020887
(Clostridium stercorarium DSM 8532)

2e-54

297) GYO_1607
( YP_004876885.1 )

glycosyl transferase family protein

NC_016047
(Bacillus subtilis TU-B-10)

3e-54

298) Alide_1984
( YP_004126615.1 )

family 2 glycosyl transferase

NC_014910
(Alicycliphilus denitrificans BC)

4e-54

299) Alide2_2237
( YP_004388122.1 )

family 2 glycosyl transferase

NC_015422
(Alicycliphilus denitrificans K601)

4e-54

300) BT_3379
( NP_812291.1 )

glycosyltransferase

NC_004663
(Bacteroides thetaiotaomicron VPI-5482)

5e-54

301) NH44784_014161
( YP_008028512.1 )

Polymyxin resistance protein ArnC, glycosyl transferase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

6e-54

302) NH44784_019181
( YP_008029011.1 )

Polymyxin resistance protein ArnC, glycosyl transferase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

1e-53

303) AZOBR_40343
( YP_005030639.1 )

putative Glycosyl transferase, family 2

NC_016617
(Azospirillum brasilense Sp245)

1e-53

304) ykcC
( YP_003919973.1 )

glycosyltransferase

NC_014551
(Bacillus amyloliquefaciens DSM 7)

1e-53

305) ykcC
( YP_005545159.1 )

glycosyltransferase

NC_017190
(Bacillus amyloliquefaciens LL3)

1e-53

306) ykcC
( YP_005541796.1 )

glycosyltransferase

NC_017188
(Bacillus amyloliquefaciens TA208)

1e-53

307) ykcC
( YP_005550164.1 )

glycosyltransferase

NC_017191
(Bacillus amyloliquefaciens XH7)

1e-53

308) Msil_0373
( YP_002360711.1 )

family 2 glycosyl transferase

NC_011666
(Methylocella silvestris BL2)

1e-53

309) SSP0107
( YP_300197.1 )

glucosyl transferase

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

1e-53

310) lwe2500
( YP_850697.1 )

glycosyl transferase family protein

NC_008555
(Listeria welshimeri SLCC5334)

6e-54

311) Bpet4604
( YP_001633222.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

7e-54

312) Mic7113_2899
( YP_007122083.1 )

glycosyl transferase family protein

NC_019738
(Microcoleus sp. PCC 7113)

7e-54

313) ykcC
( YP_008412246.1 )

putative glycosyltransferase

NC_022075
(Bacillus amyloliquefaciens UCMB-5033)

1e-53

314) ykcC
( YP_008420657.1 )

putative glycosyltransferase

NC_022081
(Bacillus amyloliquefaciens UCMB5113)

1e-53

315) midi_01004
( YP_004679970.1 )

glycosyl transferase, family 2

NC_015722
(Candidatus Midichloria mitochondrii IricVA)

2e-53

316) Syncc9605_0162
( YP_380493.1 )

glycosyl transferase

NC_007516
(Synechococcus sp. CC9605)

2e-53

317) B938_06610
( YP_007186018.1 )

hypothetical protein

NC_019842
(Bacillus amyloliquefaciens AS43.3)

2e-53

318) BN69_0375
( YP_006590477.1 )

glycosyl transferase family 2

NC_018485
(Methylocystis sp. SC2)

2e-53

319) ykcC
( YP_005129980.1 )

glycosyl transferase family protein

NC_016784
(Bacillus amyloliquefaciens CAU B946)

2e-53

320) KSO_013020
( YP_007445974.1 )

glycosyl transferase family protein

NC_020272
(Bacillus amyloliquefaciens IT-45)

2e-53

321) ykcC
( YP_006328106.1 )

putative glycosyltransferase

NC_017912
(Bacillus amyloliquefaciens Y2)

2e-53

322) ykcC
( YP_005420546.1 )

family 2 glycosyl transferase

NC_017061
(Bacillus amyloliquefaciens YAU B9601-Y2)

2e-53

323) csbB
( YP_174407.1 )

stress response protein

NC_006582
(Bacillus clausii KSM-K16)

3e-53

324) ykcC
( YP_001420868.1 )

hypothetical protein

NC_009725
(Bacillus amyloliquefaciens FZB42)

3e-53

325) ykcC
( YP_007496920.1 )

putative glycosyltransferase

NC_020410
(Bacillus amyloliquefaciens UCMB5036)

3e-53

326) BATR1942_04125
( YP_003972710.1 )

glycosyltransferase

NC_014639
(Bacillus atrophaeus 1942)

4e-53

327) Acin_0970
( YP_004896338.1 )

glycosyl transferase family protein

NC_016077
(Acidaminococcus intestini RyC-MR95)

5e-53

328) Cthe_3094
( YP_001039482.1 )

glycosyl transferase family protein

NC_009012
(Clostridium thermocellum ATCC 27405)

6e-53

329) Clo1313_0645
( YP_005687176.1 )

family 2 glycosyl transferase

NC_017304
(Clostridium thermocellum DSM 1313)

6e-53

330) CK1_39800
( YP_007785305.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021014
(Ruminococcus sp. SR1/5)

7e-53

331) MASE_03815
( YP_006746868.1 )

hypothetical protein

NC_018632
(Alteromonas macleodii ATCC 27126)

1e-52

332) MASE_19430
( YP_006749924.1 )

hypothetical protein

NC_018632
(Alteromonas macleodii ATCC 27126)

1e-52

333) AMEC673_04050
( YP_006797884.1 )

hypothetical protein

NC_018678
(Alteromonas macleodii English Channel 673)

1e-52

334) Ava_2346
( YP_322859.1 )

glycosyl transferase family protein

NC_007413
(Anabaena variabilis ATCC 29413)

2e-52

335) Selsp_1571
( YP_004413986.1 )

glycosyl transferase family 2

NC_015437
(Selenomonas sputigena ATCC 35185)

2e-52

336) UCYN_05260
( YP_003421613.1 )

glycosyl transferase

NC_013771
(Cyanobacterium sp. UCYN-A)

2e-52

337) SANR_0674
( YP_008500411.1 )

putative glycosyl transferase

NC_022239
(Streptococcus anginosus C238)

2e-52

338) gtrB
( YP_001034832.1 )

glycosyl transferase family protein

NC_009009
(Streptococcus sanguinis SK36)

3e-52

339) Fbal_2836
( YP_003914112.1 )

family 2 glycosyl transferase

NC_014541
(Ferrimonas balearica DSM 9799)

4e-52

340) ykcC
( YP_005957995.1 )

glycosyltransferase

NC_017542
(Paenibacillus polymyxa M1)

4e-52

341) PPSC2_c0378
( YP_003944603.1 )

glycosyltransferase

NC_014622
(Paenibacillus polymyxa SC2)

4e-52

342) I872_01815
( YP_007922630.1 )

glycosyl transferase family protein

NC_021175
(Streptococcus oligofermentans AS 1.3089)

4e-52

343) Mmwyl1_2662
( YP_001341510.1 )

glycosyl transferase family protein

NC_009654
(Marinomonas sp. MWYL1)

5e-52

344) CtCNB1_0426
( YP_003276468.1 )

family 2 glycosyl transferase

NC_013446
(Comamonas testosteroni CNB-1)

6e-52

345) rfaG
( YP_006993486.2 )

glycosyl transferase 2 family protein

NC_019425
(Carnobacterium maltaromaticum LMA28)

6e-52

346) lin2695
( NP_472024.1 )

hypothetical protein

NC_003212
(Listeria innocua Clip11262)

7e-52

347) Caci_8842
( YP_003119496.1 )

family 2 glycosyl transferase

NC_013131
(Catenulispora acidiphila DSM 44928)

8e-52

348) Clo1100_0988
( YP_005147048.1 )

glycosyl transferase family protein

NC_016791
(Clostridium sp. BNL1100)

1e-51

349) PCC8801_0385
( YP_002370639.1 )

family 2 glycosyl transferase

NC_011726
(Cyanothece sp. PCC 8801)

1e-51

350) Cyan8802_0394
( YP_003136189.1 )

family 2 glycosyl transferase

NC_013161
(Cyanothece sp. PCC 8802)

1e-51

351) LKI_08935
( YP_003622295.1 )

glycosyl transferase, family 2

NC_014136
(Leuconostoc kimchii IMSNU 11154)

1e-51

352) LGMK_03180
( YP_004705317.1 )

glycosyl transferase, family 2

NC_015734
(Leuconostoc sp. C2)

1e-51

353) amb0228
( YP_419591.1 )

glycosyltransferase

NC_007626
(Magnetospirillum magneticum AMB-1)

2e-51

354) gtrB
( YP_005978983.1 )

putative glycosyl transferase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

2e-51

355) Caur_0338
( YP_001633978.1 )

glycosyl transferase family protein

NC_010175
(Chloroflexus aurantiacus J-10-fl)

2e-51

356) Chy400_0363
( YP_002568127.1 )

glycosyl transferase family 2 protein

NC_012032
(Chloroflexus sp. Y-400-fl)

2e-51

357) AM1_3099
( YP_001517411.1 )

glycosyl transferase family protein

NC_009925
(Acaryochloris marina MBIC11017)

2e-51

358) Ple7327_1845
( YP_007080749.1 )

glycosyl transferase family protein

NC_019689
(Pleurocapsa minor PCC 7327)

9e-52

359) Cri9333_2706
( YP_007143071.1 )

family 2 glycosyl transferase

NC_019753
(Crinalium epipsammum PCC 9333)

2e-51

360) Lepto7376_2810
( YP_007071901.1 )

family 2 glycosyl transferase

NC_019683
(Leptolyngbya sp. PCC 7376)

2e-51

361) G655_25420
( YP_007711914.1 )

glycosyl transferase family protein

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-51

362) PLES_52041
( YP_002442782.1 )

putative glycosyl transferase

NC_011770
(Pseudomonas aeruginosa LESB58)

2e-51

363) PAM18_4929
( YP_005977511.1 )

putative glycosyl transferase

NC_017548
(Pseudomonas aeruginosa M18)

2e-51

364) PA4819
( NP_253506.1 )

glycosyl transferase family protein

NC_002516
(Pseudomonas aeruginosa PAO1)

2e-51

365) M062_25440
( YP_008135468.1 )

glycosyl transferase family 2

NC_021577
(Pseudomonas aeruginosa RP73)

2e-51

366) gtrB
( YP_793284.1 )

glycosyl transferase family protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

2e-51

367) SYNPCC7002_A0766
( YP_001734027.1 )

glycosyl transferase family protein

NC_010475
(Synechococcus sp. PCC 7002)

3e-51

368) Cagg_3592
( YP_002464866.1 )

glycosyl transferase family 2 protein

NC_011831
(Chloroflexus aggregans DSM 9485)

4e-51

369) Rvan_0770
( YP_004011145.1 )

family 2 glycosyl transferase

NC_014664
(Rhodomicrobium vannielii ATCC 17100)

5e-51

370) Cha6605_0322
( YP_007095149.1 )

glycosyl transferase

NC_019697
(Chamaesiphon minutus PCC 6605)

5e-51

371) swp_0660
( YP_002310065.1 )

Glycosyl transferase, putative

NC_011566
(Shewanella piezotolerans WP3)

1e-50

372) HDN1F_25670
( YP_003811793.1 )

family 2 glycosyl transferase

NC_014366
(gamma proteobacterium HdN1)

1e-50

373) Chro_1880
( YP_007091260.1 )

family 2 glycosyl transferase

NC_019695
(Chroococcidiopsis thermalis PCC 7203)

8e-51

374) PCNPT3_12175
( YP_007641209.1 )

family 2 glycosyl transferase

NC_020802
(Psychromonas sp. CNPT3)

8e-51

375) Ssed_0713
( YP_001472452.1 )

glycosyl transferase family protein

NC_009831
(Shewanella sediminis HAW-EB3)

2e-50

376) Anacy_2498
( YP_007156856.1 )

glycosyl transferase family 2

NC_019771
(Anabaena cylindrica PCC 7122)

2e-50

377) BN112_4147
( YP_006970182.1 )

glycosyl transferase family protein

NC_019382
(Bordetella bronchiseptica 253)

2e-50

378) BB4269
( NP_890804.1 )

glycosyl transferase

NC_002927
(Bordetella bronchiseptica RB50)

2e-50

379) BPP3825
( NP_885977.1 )

glycosyl transferase

NC_002928
(Bordetella parapertussis 12822)

2e-50

380) BN118_3415
( YP_006627863.1 )

glycosyl transferase family protein

NC_018518
(Bordetella pertussis 18323)

2e-50

381) BPTD_0414
( YP_005588669.1 )

putative glycosyl transferase

NC_017223
(Bordetella pertussis CS)

2e-50

382) BP0399
( NP_879268.1 )

glycosyl transferase family protein

NC_002929
(Bordetella pertussis Tohama I)

2e-50

383) Clole_2043
( YP_004308955.1 )

family 2 glycosyl transferase

NC_015275
(Clostridium lentocellum DSM 5427)

2e-50

384) DvMF_1923
( YP_002436334.1 )

family 2 glycosyl transferase

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

3e-50

385) Glo7428_0278
( YP_007126047.1 )

glycosyl transferase family 2

NC_019745
(Gloeocapsa sp. PCC 7428)

3e-50

386) Npun_R5879
( YP_001869118.1 )

glycosyl transferase family protein

NC_010628
(Nostoc punctiforme PCC 73102)

3e-50

387) PSPA7_5538
( YP_001350859.1 )

putative glycosyl transferase

NC_009656
(Pseudomonas aeruginosa PA7)

4e-50

388) Tery_0804
( YP_720694.1 )

glycosyl transferase family protein

NC_008312
(Trichodesmium erythraeum IMS101)

4e-50

389) BPUM_3158
( YP_001488372.1 )

glycosyltransferase

NC_009848
(Bacillus pumilus SAFR-032)

5e-50

390) BN117_3877
( YP_006897633.1 )

glycosyl transferase

NC_018828
(Bordetella parapertussis Bpp5)

5e-50

391) CL3_03630
( YP_007809255.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021024
(butyrate-producing bacterium SM4/1)

1e-49

392) CLS_00400
( YP_007847942.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021047
(Clostridium saccharolyticum K10)

8e-50

393) LDBND_0051
( YP_004033084.1 )

glycosyltransferase related enzyme

NC_014727
(Lactobacillus delbrueckii ND02)

8e-50

394) Syncc9902_0192
( YP_376210.1 )

glycosyl transferase

NC_007513
(Synechococcus sp. CC9902)

9e-50

395) RoseRS_4447
( YP_001278729.1 )

glycosyl transferase family protein

NC_009523
(Roseiflexus sp. RS-1)

1e-49

396) Nos7107_0189
( YP_007048025.1 )

family 2 glycosyl transferase

NC_019676
(Nostoc sp. PCC 7107)

2e-49

397) LCK_01138
( YP_001728409.1 )

cell wall biosynthesis glycosyltransferase

NC_010471
(Leuconostoc citreum KM20)

2e-49

398) C269_03685
( YP_006745066.1 )

glycosyltransferase

NC_018631
(Leuconostoc gelidum JB7)

2e-49

399) SII_0977
( YP_008497149.1 )

putative glycosyl transferase

NC_022237
(Streptococcus intermedius C270)

2e-49

400) AB57_3034
( YP_002320358.1 )

glycosyltransferase

NC_011586
(Acinetobacter baumannii AB0057)

2e-49

401) Spea_3629
( YP_001503475.1 )

glycosyl transferase family protein

NC_009901
(Shewanella pealeana ATCC 700345)

3e-49

402) ABBFA_000857
( YP_002324770.1 )

Bactoprenol glucosyl transferase

NC_011595
(Acinetobacter baumannii AB307-0294)

3e-49

403) ABAYE0870
( YP_001712823.1 )

CPS-53 prophage, bactoprenol glucosyl transferase

NC_010410
(Acinetobacter baumannii AYE)

3e-49

404) AOLE_04210
( YP_003731112.1 )

glycosyltransferase

NC_014259
(Acinetobacter oleivorans DR1)

3e-49

405) SIR_0960
( YP_008512895.1 )

putative glycosyl transferase

NC_022246
(Streptococcus intermedius B196)

3e-49

406) Ccel_1307
( YP_002505641.1 )

family 2 glycosyl transferase

NC_011898
(Clostridium cellulolyticum H10)

3e-49

407) M446_5303
( YP_001772058.1 )

glycosyl transferase family protein

NC_010511
(Methylobacterium sp. 4-46)

3e-49

408) Daro_2759
( YP_285959.1 )

glycosyl transferase

NC_007298
(Dechloromonas aromatica RCB)

3e-49

409) PADK2_25575
( YP_006485080.1 )

glycosyl transferase

NC_018080
(Pseudomonas aeruginosa DK2)

3e-49

410) Swoo_4251
( YP_001762602.1 )

glycosyl transferase family protein

NC_010506
(Shewanella woodyi ATCC 51908)

4e-49

411) Cal7507_2922
( YP_007066170.1 )

family 2 glycosyl transferase

NC_019682
(Calothrix sp. PCC 7507)

4e-49

412) Dtox_4310
( YP_003193597.1 )

family 2 glycosyl transferase

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

4e-49

413) Geob_0317
( YP_002535789.1 )

family 2 glycosyl transferase

NC_011979
(Geobacter daltonii FRC-32)

4e-49

414) CIY_26700
( YP_007820319.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021031
(Butyrivibrio fibrisolvens 16/4)

5e-49

415) Dacsa_3619
( YP_007173456.1 )

glycosyl transferase family protein

NC_019780
(Dactylococcopsis salina PCC 8305)

7e-49

416) BJAB0715_02996
( YP_008218144.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021733
(Acinetobacter baumannii BJAB0715)

1e-48

417) ABD1_25760
( YP_007597121.1 )

glycosyltransferase

NC_020547
(Acinetobacter baumannii D1279779)

1e-48

418) gtrB
( YP_006469555.1 )

glycosyltransferase

NC_018073
(Streptococcus intermedius JTH08)

1e-48

419) AXYL_00712
( YP_003976783.1 )

glycosyl transferase family 2

NC_014640
(Achromobacter xylosoxidans A8)

1e-48

420) Bpet0641
( YP_001629244.1 )

bactoprenol glycosyltransferase

NC_010170
(Bordetella petrii DSM 12804)

1e-48

421) Dtox_4133
( YP_003193424.1 )

family 2 glycosyl transferase

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

1e-48

422) SHJG_3014
( YP_006244161.1 )

sugar transferase

NC_017765
(Streptomyces hygroscopicus 5008)

1e-48

423) SHJGH_2779
( YP_007691779.1 )

sugar transferase

NC_020895
(Streptomyces hygroscopicus TL01)

1e-48

424) gtrB
( YP_787423.1 )

bactoprenol glucosyl transferase

NC_010645
(Bordetella avium 197N)

1e-48

425) Msip34_1281
( YP_003051054.1 )

family 2 glycosyl transferase

NC_012969
(Methylovorus glucosetrophus SIP3-4)

1e-48

426) ABK1_2920
( YP_005515492.1 )

Putative CPS-53 prophage, bactoprenol glucosyl transferase

NC_017162
(Acinetobacter baumannii 1656-2)

2e-48

427) ACICU_02866
( YP_001847525.1 )

glycosyltransferase

NC_010611
(Acinetobacter baumannii ACICU)

2e-48

428) BJAB07104_02957
( YP_008210420.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021726
(Acinetobacter baumannii BJAB07104)

2e-48

429) BJAB0868_02837
( YP_008214161.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021729
(Acinetobacter baumannii BJAB0868)

2e-48

430) ABTJ_00849
( YP_006288767.1 )

glycosyl transferase family protein

NC_017847
(Acinetobacter baumannii MDR-TJ)

2e-48

431) ABZJ_03051
( YP_005527007.1 )

glycosyltransferase

NC_017171
(Acinetobacter baumannii MDR-ZJ06)

2e-48

432) ABTW07_3088
( YP_005799968.1 )

glycosyltransferase

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

2e-48

433) M3Q_3099
( YP_006849417.1 )

glycosyltransferase

NC_018706
(Acinetobacter baumannii TYTH-1)

2e-48

434) csbB
( YP_006178845.1 )

glycosyltransferase CsbB

NC_017668
(Halobacillus halophilus DSM 2266)

2e-48

435) RoseRS_3414
( YP_001277722.1 )

ribonuclease III

NC_009523
(Roseiflexus sp. RS-1)

2e-48

436) Rcas_1513
( YP_001431624.1 )

ribonuclease III

NC_009767
(Roseiflexus castenholzii DSM 13941)

2e-48

437) LEGAS_0760
( YP_003772227.1 )

glycosyltransferase

NC_014319
(Leuconostoc gasicomitatum LMG 18811)

2e-48

438) blr7526
( NP_774166.1 )

glycosyl transferase family protein

NC_004463
(Bradyrhizobium japonicum USDA 110)

2e-48

439) CLJU_c38890
( YP_003782016.1 )

glycosyltransferase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

3e-48

440) ENT_26750
( YP_007808783.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021023
(Enterococcus sp. 7L76)

3e-48

441) PMT1934
( NP_895759.1 )

glycosyl transferase family protein

NC_005071
(Prochlorococcus marinus MIT 9313)

3e-48

442) GEI7407_2686
( YP_007110211.1 )

family 2 glycosyl transferase

NC_019703
(Geitlerinema sp. PCC 7407)

3e-48

443) EFD32_2511
( YP_006538870.1 )

putative glycosyltransferase csbB-like protein

NC_018221
(Enterococcus faecalis D32)

3e-48

444) EFS1_2314
( YP_007154106.1 )

glycosyl transferase, group 2 family protein

NC_019770
(Enterococcus faecalis Symbioflor 1)

3e-48

445) EF2908
( NP_816526.1 )

glycosyl transferase group 2 family protein

NC_004668
(Enterococcus faecalis V583)

3e-48

446) P9303_25741
( YP_001018570.1 )

glycosyl transferase family protein

NC_008820
(Prochlorococcus marinus MIT 9303)

3e-48

447) Mar181_1407
( YP_004481369.1 )

family 2 glycosyl transferase

NC_015559
(Marinomonas posidonica IVIA-Po-181)

4e-48

448) OG1RF_12208
( YP_005709265.1 )

group 2 glycosyl transferase

NC_017316
(Enterococcus faecalis OG1RF)

4e-48

449) Clocel_1542
( YP_003843054.1 )

family 2 glycosyl transferase

NC_014393
(Clostridium cellulovorans 743B)

4e-48

450) wcaA
( YP_004039754.1 )

family 2 glycosyl transferase

NC_014733
(Methylovorus sp. MP688)

4e-48

451) CCU_19750
( YP_007796768.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021018
(Coprococcus sp. ART55/1)

4e-48

452) STHERM_c17660
( YP_003874974.1 )

glycosyltransferase

NC_014484
(Spirochaeta thermophila DSM 6192)

5e-48

453) XOC_3227
( YP_005629490.1 )

SfII prophage-derived bactoprenol glucosyl transferase

NC_017267
(Xanthomonas oryzae BLS256)

5e-48

454) A284_09785
( YP_007385716.1 )

hypothetical protein

NC_020164
(Staphylococcus warneri SG1)

5e-48

455) AZOLI_2370
( YP_005039797.1 )

putative Glycosyl transferase, family 2

NC_016622
(Azospirillum lipoferum 4B)

1e-47

456) RC1_0152
( YP_002296413.1 )

glycosyl transferase family protein

NC_011420
(Rhodospirillum centenum SW)

1e-47

457) Cphy_0299
( YP_001557425.1 )

glycosyl transferase family protein

NC_010001
(Clostridium phytofermentans ISDg)

1e-47

458) CBUD_1485
( YP_001424829.1 )

polyprenyl-phosphate beta-D-glucosyltransferase

NC_009727
(Coxiella burnetii Dugway 5J108-111)

1e-47

459) csbB
( YP_002561870.1 )

glucosyl transferase

NC_012004
(Streptococcus uberis 0140J)

7e-48

460) LRC_01200
( YP_004831387.1 )

glycosyltransferase

NC_015975
(Lactobacillus ruminis ATCC 27782)

8e-48

461) BMD_2071
( YP_003597274.1 )

glycosyl transferase family protein

NC_014103
(Bacillus megaterium DSM 319)

9e-48

462) wcaA
( YP_003376666.1 )

glycosyltransferase

NC_013722
(Xanthomonas albilineans GPE PC73)

9e-48

463) dpm1
( NP_441931.1 )

dolichol phosphate mannose synthase

NC_000911
(Synechocystis sp. PCC 6803)

1e-47

464) dpm1
( YP_007451811.1 )

dolichol phosphate mannose synthase

NC_020286
(Synechocystis sp. PCC 6803)

1e-47

465) BMQ_2115
( YP_003562578.1 )

Glycosyl transferase

NC_014019
(Bacillus megaterium QM B1551)

2e-47

466) Spith_1837
( YP_006045813.1 )

family 2 glycosyl transferase

NC_017583
(Spirochaeta thermophila DSM 6578)

2e-47

467) SCI_1201
( YP_008499128.1 )

putative glycosyl transferase

NC_022238
(Streptococcus constellatus C1050)

2e-47

468) SCRE_1142
( YP_008495538.1 )

putative glycosyl transferase

NC_022236
(Streptococcus constellatus C232)

2e-47

469) SCR2_1142
( YP_008511300.1 )

putative glycosyl transferase

NC_022245
(Streptococcus constellatus C818)

2e-47

470) ykcC
( YP_005495332.1 )

glycosyltransferase ykcC

NC_017138
(Bacillus megaterium WSH-002)

2e-47

471) dpm1
( YP_005383799.1 )

dolichol phosphate mannose synthase

NC_017038
(Synechocystis sp. PCC 6803)

2e-47

472) dpm1
( YP_005386968.1 )

dolichol phosphate mannose synthase

NC_017039
(Synechocystis sp. PCC 6803)

2e-47

473) dpm1
( YP_005409675.1 )

dolichol phosphate mannose synthase

NC_017052
(Synechocystis sp. PCC 6803)

2e-47

474) dpm1
( YP_005651991.1 )

dolichol phosphate mannose synthase

NC_017277
(Synechocystis sp. PCC 6803)

2e-47

475) CbuG_1420
( YP_002303867.1 )

polyprenyl-phosphate beta-D-glucosyltransferase

NC_011527
(Coxiella burnetii CbuG_Q212)

2e-47

476) CbuK_1260
( YP_002305589.1 )

polyprenyl-phosphate beta-D-glucosyltransferase

NC_011528
(Coxiella burnetii CbuK_Q154)

2e-47

477) COXBURSA331_A0692
( YP_001596506.1 )

glycosyl transferase family protein

NC_010117
(Coxiella burnetii RSA 331)

2e-47

478) CBU_0578
( NP_819608.1 )

polyprenyl-phosphate beta-D-glucosyltransferase

NC_002971
(Coxiella burnetii RSA 493)

2e-47

479) AZL_023000
( YP_003449482.1 )

glycosyltransferase

NC_013854
(Azospirillum sp. B510)

3e-47

480) LMRG_01697
( YP_005963657.1 )

hypothetical protein

NC_017544
(Listeria monocytogenes 10403S)

3e-47

481) M642_10965
( YP_008273002.1 )

bactoprenol glucosyl transferase

NC_021823
(Listeria monocytogenes C1-387)

3e-47

482) lmo2550
( NP_466073.1 )

hypothetical protein

NC_003210
(Listeria monocytogenes EGD-e)

3e-47

483) LMLG_2763
( YP_005972297.1 )

glycosyl transferase family protein

NC_017547
(Listeria monocytogenes Finland 1988)

3e-47

484) LMKG_02479
( YP_005969512.1 )

glycosyl transferase family protein

NC_017546
(Listeria monocytogenes FSL R2-561)

3e-47

485) LMOG_02308
( YP_005966549.1 )

glycosyl transferase family protein

NC_017545
(Listeria monocytogenes J0161)

3e-47

486) M639_04235
( YP_008295464.1 )

bactoprenol glucosyl transferase

NC_021837
(Listeria monocytogenes J2-031)

3e-47

487) M637_00945
( YP_008274010.1 )

bactoprenol glucosyl transferase

NC_021824
(Listeria monocytogenes J2-064)

3e-47

488) BN418_3017
( YP_007605010.1 )

Uncharacterized glycosyltransferase sll0501

NC_020557
(Listeria monocytogenes La111)

3e-47

489) M643_08235
( YP_008281181.1 )

bactoprenol glucosyl transferase

NC_021826
(Listeria monocytogenes N1-011A)

3e-47

490) BN419_3030
( YP_007608153.1 )

Uncharacterized glycosyltransferase sll0501

NC_020558
(Listeria monocytogenes N53-1)

3e-47

491) LMOSLCC2372_2614
( YP_006685941.1 )

glycosyl transferase family protein

NC_018588
(Listeria monocytogenes SLCC2372)

3e-47

492) LMOSLCC2479_2613
( YP_006688876.1 )

glycosyl transferase family protein

NC_018589
(Listeria monocytogenes SLCC2479)

3e-47

493) LMOSLCC2540_2583
( YP_006680126.1 )

glycosyl transferase family protein

NC_018586
(Listeria monocytogenes SLCC2540)

3e-47

494) LMOSLCC2755_2556
( YP_006683006.1 )

glycosyl transferase family protein

NC_018587
(Listeria monocytogenes SLCC2755)

3e-47

495) LMOSLCC5850_2554
( YP_006697381.1 )

glycosyl transferase family protein

NC_018592
(Listeria monocytogenes SLCC5850)

3e-47

496) LMOSLCC7179_2462
( YP_006700155.1 )

glycosyl transferase family protein

NC_018593
(Listeria monocytogenes SLCC7179)

3e-47

497) LM5578_2745
( YP_003414853.1 )

hypothetical protein

NC_013766
(Listeria monocytogenes 08-5578)

3e-47

498) LM5923_2694
( YP_003417897.1 )

hypothetical protein

NC_013768
(Listeria monocytogenes 08-5923)

3e-47

499) Mfla_1377
( YP_545486.1 )

glycosyl transferase family protein

NC_007947
(Methylobacillus flagellatus KT)

3e-47

500) Acear_2145
( YP_003828698.1 )

family 2 glycosyl transferase

NC_014378
(Acetohalobium arabaticum DSM 5501)

3e-47

501) LEUM_1401
( YP_818867.1 )

glycosyltransferase-like protein

NC_008531
(Leuconostoc mesenteroides ATCC 8293)

3e-47

502) MI1_06170
( YP_005174644.1 )

glycosyltransferase-like protein

NC_016805
(Leuconostoc mesenteroides J18)

3e-47

503) MELS_1190
( YP_004766239.1 )

glycosyltransferase

NC_015873
(Megasphaera elsdenii DSM 20460)

3e-47

504) L336_0514
( YP_007985106.1 )

Glycosyltransferase

NC_021219
(Candidatus Saccharimonas aalborgensis )

4e-47

505) SAIN_0665
( YP_008509113.1 )

putative glycosyl transferase

NC_022244
(Streptococcus anginosus C1051)

4e-47

506) S23_61560
( YP_005453456.1 )

putative glycosyltransferase

NC_017082
(Bradyrhizobium sp. S23321)

4e-47

507) BJ6T_17650
( YP_005606634.1 )

hypothetical protein

NC_017249
(Bradyrhizobium japonicum USDA 6)

5e-47

508) Slin_0212
( YP_003385076.1 )

family 2 glycosyl transferase

NC_013730
(Spirosoma linguale DSM 74)

6e-47

509) SDSE_0570
( YP_006904126.1 )

glucosyltransferase

NC_019042
(Streptococcus dysgalactiae AC-2713)

6e-47

510) SDE12394_02720
( YP_006012658.1 )

putative sugar transferase

NC_017567
(Streptococcus dysgalactiae ATCC 12394)

6e-47

511) SDEG_0540
( YP_002996256.1 )

sugar transferase

NC_012891
(Streptococcus dysgalactiae GGS_124)

6e-47

512) rfaG
( YP_005863282.1 )

Glycosyltransferase

NC_017481
(Lactobacillus salivarius CECT 5713)

7e-47

513) rfaG
( YP_535069.1 )

glycosyltransferase

NC_007929
(Lactobacillus salivarius UCC118)

7e-47

514) GGS_0516
( YP_006859169.1 )

putative sugar transferase

NC_018712
(Streptococcus dysgalactiae RE378)

7e-47

515) LBU_0044
( YP_005851253.1 )

glycosyl transferase

NC_017469
(Lactobacillus delbrueckii 2038)

1e-46

516) Ldb0071
( YP_618281.1 )

glycosyl transferase family protein

NC_008054
(Lactobacillus delbrueckii ATCC 11842)

1e-46

517) LBUL_0061
( YP_812187.1 )

glycosyltransferase-like protein

NC_008529
(Lactobacillus delbrueckii ATCC BAA-365)

1e-46

518) Cpha266_0350
( YP_910833.1 )

glycosyl transferase family protein

NC_008639
(Chlorobium phaeobacteroides DSM 266)

1e-46

519) Cyan7425_1943
( YP_002482669.1 )

family 2 glycosyl transferase

NC_011884
(Cyanothece sp. PCC 7425)

1e-46

520) PHZ_c0185
( YP_002129028.1 )

glycosyl transferase family protein

NC_011144
(Phenylobacterium zucineum HLK1)

2e-46

521) Mmol_1244
( YP_003048677.1 )

family 2 glycosyl transferase

NC_012968
(Methylotenera mobilis JLW8)

2e-46

522) N134_07655
( YP_008326799.1 )

bactoprenol glucosyl transferase

NC_021872
(Lactobacillus reuteri TD1)

2e-46

523) LSA1519
( YP_396133.1 )

teichoic acid/polysaccharide glycosyl transferase

NC_007576
(Lactobacillus sakei 23K)

2e-46

524) all5118
( NP_489158.1 )

hypothetical protein

NC_003272
(Nostoc sp. PCC 7120)

2e-46

525) SSUA7_0881
( YP_006084547.1 )

glycosyl transferase family protein

NC_017622
(Streptococcus suis A7)

3e-46

526) LMOSLCC2482_2554
( YP_006694507.1 )

glycosyl transferase

NC_018591
(Listeria monocytogenes SLCC2482)

3e-46

527) ECBG_01921
( YP_007753306.1 )

glycosyl transferase

NC_020995
(Enterococcus casseliflavus EC20)

4e-46

528) MPTP_0516
( YP_004455800.1 )

bactoprenol glucosyl transferase

NC_015516
(Melissococcus plutonius ATCC 35311)

5e-46

529) MPD5_1400
( YP_005320101.1 )

bactoprenol glucosyl transferase

NC_016938
(Melissococcus plutonius DAT561)

5e-46

530) ykcC
( YP_004375493.1 )

putative glycosyltransferase

NC_015391
(Carnobacterium sp. 17-4)

5e-46

531) ACIAD1119
( YP_045823.1 )

CPS-53 prophage, bactoprenol glucosyl transferase

NC_005966
(Acinetobacter sp. ADP1)

6e-46

532) CLDAP_20770
( YP_005442014.1 )

putative glycosyltransferase

NC_017079
(Caldilinea aerophila DSM 14535)

9e-46

533) SSUBM407_0915
( YP_003028659.1 )

glycosyl transferase family protein

NC_012926
(Streptococcus suis BM407)

1e-45

534) SSGZ1_0888
( YP_006074287.1 )

putative glycosyltransferase

NC_017617
(Streptococcus suis GZ1)

1e-45

535) SSUJS14_0990
( YP_006076338.1 )

glycosyl transferase family protein

NC_017618
(Streptococcus suis JS14)

1e-45

536) SSU0863
( YP_003026741.1 )

glycosyl transferase

NC_012925
(Streptococcus suis P1/7)

1e-45

537) YYK_04085
( YP_006649734.1 )

glycosyl transferase family protein

NC_018526
(Streptococcus suis S735)

1e-45

538) NJAUSS_0944
( YP_007570895.1 )

glycosyltransferase

NC_020526
(Streptococcus suis SC070731)

1e-45

539) SSUSC84_0909
( YP_003024917.1 )

glycosyl transferase

NC_012924
(Streptococcus suis SC84)

1e-45

540) SSU12_0930
( YP_006078361.1 )

glycosyl transferase family protein

NC_017619
(Streptococcus suis SS12)

1e-45

541) lse_2456
( YP_003465689.1 )

glycosyl transferase family protein

NC_013891
(Listeria seeligeri SLCC3954)

1e-45

542) Lreu_1376
( YP_001271962.1 )

glycosyl transferase family protein

NC_009513
(Lactobacillus reuteri DSM 20016)

1e-45

543) LAR_1295
( YP_001842291.1 )

glycosyltransferase

NC_010609
(Lactobacillus reuteri JCM 1112)

1e-45

544) NH8B_1027
( YP_004846273.1 )

family 2 glycosyl transferase

NC_016002
(Pseudogulbenkiania sp. NH8B)

1e-45

545) LRI_0603
( YP_008098957.1 )

glycosyl transferase family protein

NC_021494
(Lactobacillus reuteri I5007)

2e-45

546) Msm_1627
( YP_001274200.1 )

glycosyl transferase family protein

NC_009515
(Methanobrevibacter smithii ATCC 35061)

2e-45

547) SSU98_1017
( YP_001200575.1 )

glycosyltransferase

NC_009443
(Streptococcus suis 98HAH33)

2e-45

548) SSUD9_1150
( YP_006080599.1 )

glycosyl transferase family protein

NC_017620
(Streptococcus suis D9)

3e-45

549) SSUST1_0937
( YP_006358830.1 )

glycosyl transferase family protein

NC_017950
(Streptococcus suis ST1)

3e-45

550) SSUST3_1040
( YP_004401659.1 )

glycosyl transferase

NC_015433
(Streptococcus suis ST3)

3e-45

551) Moth_2359
( YP_431185.1 )

glycosyl transferase family protein

NC_007644
(Moorella thermoacetica ATCC 39073)

3e-45

552) SAAG_01127
( YP_008448634.1 )

glycosyl transferase, family 2

NC_022113
(Staphylococcus aureus 55/2053)

4e-45

553) SSUD12_0880
( YP_006082443.1 )

glycosyl transferase family protein

NC_017621
(Streptococcus suis D12)

4e-45

554) TL13_0918
( YP_007975273.1 )

Glycosyl transferase, group 2 family protein

NC_021213
(Streptococcus suis TL13)

4e-45

555) CK5_23930
( YP_007805696.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021022
([Ruminococcus] obeum A2-162)

4e-45

556) csbB
( YP_004841385.1 )

glycosyltransferase csbB

NC_015978
(Lactobacillus sanfranciscensis TMW 1.1304)

5e-45

557) lse_0831
( YP_003464070.1 )

glycosyl transferase group 2

NC_013891
(Listeria seeligeri SLCC3954)

1e-44

558) SACE_0180
( YP_001102458.1 )

glycosyl transferase

NC_009142
(Saccharopolyspora erythraea NRRL 2338)

1e-44

559) Cspa_c27890
( YP_007455806.1 )

glycosyl transferase family 2

NC_020291
(Clostridium saccharoperbutylacetonicum N1-4(HMT))

1e-44

560) PEPE_1610
( YP_805073.1 )

glycosyltransferase-like protein

NC_008525
(Pediococcus pentosaceus ATCC 25745)

1e-44

561) LVISKB_1507
( YP_007654347.1 )

uncharacterized glycosyltransferase sll0501

NC_020819
(Lactobacillus brevis KB290)

7e-45

562) SAMSHR1132_06490
( YP_005325173.1 )

putative glucosyl transferase

NC_016941
(Staphylococcus aureus MSHR1132)

8e-45

563) csbB
( YP_005741430.1 )

CsbB stress response protein

NC_017340
(Staphylococcus aureus 04-02981)

2e-44

564) MS7_0755
( YP_005757202.1 )

glycosyl transferase 2 family protein

NC_017351
(Staphylococcus aureus 11819-97)

2e-44

565) SABB_00753
( YP_008167864.1 )

glycosyl transferase

NC_021670
(Staphylococcus aureus Bmb9393)

2e-44

566) SAKOR_00701
( YP_008490889.1 )

Putative glycosyl transferase family 2 protein

NC_022226
(Staphylococcus aureus CN1)

2e-44

567) SACOL0764
( YP_185641.1 )

glycosyl transferase, group 2 family protein

NC_002951
(Staphylococcus aureus COL)

2e-44

568) ECTR2_655
( YP_005749389.1 )

putative glycosyltransferase csbB

NC_017343
(Staphylococcus aureus ECT-R 2)

2e-44

569) SAUSA300_0689
( YP_493392.1 )

glycosyl transferase, group 2 family protein

NC_007793
(Staphylococcus aureus FPR3757)

2e-44

570) SAEMRSA15_06300
( YP_006237000.1 )

putative glucosyl transferase

NC_017763
(Staphylococcus aureus HO 5096 0412)

2e-44

571) SaurJH1_0744
( YP_001315887.1 )

glycosyl transferase family protein

NC_009632
(Staphylococcus aureus JH1)

2e-44

572) SaurJH9_0728
( YP_001246107.1 )

glycosyl transferase family protein

NC_009487
(Staphylococcus aureus JH9)

2e-44

573) SAA6008_00720
( YP_005744093.1 )

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase

NC_017341
(Staphylococcus aureus JKD6008)

2e-44

574) SAA6159_00659
( YP_005738817.1 )

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase

NC_017338
(Staphylococcus aureus JKD6159)

2e-44

575) BN843_7050
( YP_007867774.1 )

CsbB stress response protein

NC_021059
(Staphylococcus aureus M1)

2e-44

576) SAS0669
( YP_042797.1 )

glucosyl transferase

NC_002953
(Staphylococcus aureus MSSA476)

2e-44

577) MW0666
( NP_645483.1 )

hypothetical protein

NC_003923
(Staphylococcus aureus MW2)

2e-44

578) SAOUHSC_00713
( YP_499272.1 )

hypothetical protein

NC_007795
(Staphylococcus aureus NCTC 8325)

2e-44

579) NWMN_0673
( YP_001331707.1 )

hypothetical protein

NC_009641
(Staphylococcus aureus Newman)

2e-44

580) SAI6T6_1005420
( YP_007583138.1 )

MW0666 protein

NC_020536
(Staphylococcus aureus ST228)

2e-44

581) SAI5S5_1005410
( YP_007620852.1 )

MW0666 protein

NC_020566
(Staphylococcus aureus ST228)

2e-44

582) SAI8T7_1005450
( YP_007622841.1 )

MW0666 protein

NC_020568
(Staphylococcus aureus ST228)

2e-44

583) SAI1T1_2005440
( YP_007577151.1 )

MW0666 protein

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

2e-44

584) SAI2T2_1005460
( YP_007618868.1 )

MW0666 protein

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

2e-44

585) SAI3T3_1005450
( YP_007579160.1 )

MW0666 protein

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

2e-44

586) SAI4T8_1005440
( YP_007581123.1 )

MW0666 protein

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

2e-44

587) SAI7S6_1005450
( YP_007585104.1 )

MW0666 protein

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

2e-44

588) SAT0131_00774
( YP_005752005.1 )

glycosyltransferase

NC_017347
(Staphylococcus aureus T0131)

2e-44

589) USA300HOU_0727
( YP_001574627.1 )

glycosyltransferase

NC_010079
(Staphylococcus aureus TCH1516)

2e-44

590) SATW20_07790
( YP_005730791.1 )

putative glucosyl transferase

NC_017331
(Staphylococcus aureus TW20)

2e-44

591) SAVC_03155
( YP_005290228.1 )

glycosyl transferase family protein

NC_016912
(Staphylococcus aureus VC40)

2e-44

592) BCG9842_B5394
( YP_002448971.1 )

bactoprenol glucosyl transferase

NC_011772
(Bacillus cereus G9842)

2e-44

593) BTG_21225
( YP_006605694.1 )

bactoprenol glucosyl transferase

NC_018500
(Bacillus thuringiensis HD-771)

2e-44

594) R2APBS1_2036
( YP_007590394.1 )

glycosyl transferase

NC_020541
(Rhodanobacter sp. 2APBS1)

2e-44

595) BTF1_25645
( YP_006613212.1 )

bactoprenol glucosyl transferase

NC_018508
(Bacillus thuringiensis HD-789)

2e-44

596) C248_0788
( YP_006709531.1 )

glucosyl transferase

NC_018608
(Staphylococcus aureus 08BA02176)

3e-44

597) ST398NM01_0781
( YP_006194848.1 )

Undecaprenyl-phosphate beta-N-acetylglucosaminyltransferase

NC_017673
(Staphylococcus aureus 71193)

3e-44

598) SAPIG0781
( YP_005733581.1 )

bactoprenol glucosyl transferase

NC_017333
(Staphylococcus aureus ST398)

3e-44

599) EFAU004_00549
( YP_005353752.1 )

glycosyl transferase family protein

NC_017022
(Enterococcus faecium Aus0004)

3e-44

600) EFAU085_00487
( YP_008394011.1 )

glycosyl transferase, group 2 family protein

NC_021994
(Enterococcus faecium AUS0085)

3e-44

601) HMPREF0351_10563
( YP_006375169.1 )

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase

NC_017960
(Enterococcus faecium DO)

3e-44

602) M7W_725
( YP_007393425.1 )

Bactoprenol glucosyl transferase

NC_020207
(Enterococcus faecium NRRL B-2354)

3e-44

603) SAHV_0701
( YP_001441291.1 )

hypothetical protein

NC_009782
(Staphylococcus aureus Mu3)

3e-44

604) SAV0704
( NP_371228.1 )

CsbB stress response protein

NC_002758
(Staphylococcus aureus Mu50)

3e-44

605) SA0659
( NP_373914.1 )

hypothetical protein

NC_002745
(Staphylococcus aureus N315)

3e-44

606) LIV_0875
( YP_004854664.1 )

putative sugar transferase

NC_016011
(Listeria ivanovii PAM 55)

3e-44

607) RSAU_000679
( YP_008484710.1 )

bactoprenol glucosyl transferase, putative

NC_022222
(Staphylococcus aureus 6850)

4e-44

608) SAOV_0738
( YP_005736236.1 )

glycosyl transferase family protein

NC_017337
(Staphylococcus aureus ED133)

4e-44

609) SAAV_0666
( YP_003281593.1 )

glycosyl transferase, group 2 family protein

NC_013450
(Staphylococcus aureus ED98)

4e-44

610) SARLGA251_06370
( YP_005754637.1 )

putative glucosyl transferase

NC_017349
(Staphylococcus aureus LGA251)

4e-44

611) M013TW_0690
( YP_005297137.1 )

CsbB stress response protein

NC_016928
(Staphylococcus aureus M013)

4e-44

612) SA40_0644
( YP_008587289.1 )

putative glucosyl transferase

NC_022443
(Staphylococcus aureus SA40)

4e-44

613) SA957_0659
( YP_008584757.1 )

putative glucosyl transferase

NC_022442
(Staphylococcus aureus SA957)

4e-44

614) ENT_22900
( YP_007808481.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021023
(Enterococcus sp. 7L76)

4e-44

615) CA347_720
( YP_008127583.1 )

glycosyl transferase 2 family protein

NC_021554
(Staphylococcus aureus CA-347)

5e-44

616) SAR0757
( YP_040184.1 )

glucosyl transferase

NC_002952
(Staphylococcus aureus MRSA252)

5e-44

617) HMPREF0772_12483
( YP_005748565.1 )

group 2 glycosyl transferase

NC_017342
(Staphylococcus aureus TCH60)

5e-44

618) LACR_2086
( YP_811676.1 )

glycosyltransferase

NC_008527
(Lactococcus lactis SK11)

1e-43

619) Clocl_2555
( YP_005047049.1 )

glycosyl transferase family protein

NC_016627
(Clostridium clariflavum DSM 19732)

1e-43

620) PRU_2903
( YP_003576137.1 )

group 2 family glycosyltransferase

NC_014033
(Prevotella ruminicola 23)

1e-43

621) SMUGS5_09305
( YP_006491125.1 )

stress response protein

NC_018089
(Streptococcus mutans GS-5)

1e-43

622) BSA_15580
( YP_008085205.1 )

Bactoprenol glucosyl transferase; Glycosyltransferase, group 2 family protein

NC_021485
(Streptococcus agalactiae 09mas018883)

6e-44

623) SAG1479
( NP_688473.1 )

glycosyl transferase family protein

NC_004116
(Streptococcus agalactiae 2603V/R)

6e-44

624) SAK_1509
( YP_330116.1 )

glycosyl transferase

NC_007432
(Streptococcus agalactiae A909)

6e-44

625) rgpI
( YP_006764596.1 )

glycosyl transferase

NC_018646
(Streptococcus agalactiae GD201008-001)

6e-44

626) SAIL_15400
( YP_008118154.1 )

Bactoprenol glucosyl transferase; Glycosyltransferase, group 2 family protein

NC_021507
(Streptococcus agalactiae ILRI112)

6e-44

627) stu1485
( YP_139904.1 )

glycosyl transferase family protein

NC_006448
(Streptococcus thermophilus LMG 18311)

7e-44

628) SOR_0607
( YP_004325610.1 )

Glycosyl transferase

NC_015291
(Streptococcus oralis Uo5)

7e-44

629) gbs1545
( NP_735982.1 )

glycosyl transferase, group 2 family protein

NC_004368
(Streptococcus agalactiae NEM316)

8e-44

630) uc509_1851
( YP_007000131.1 )

Glycosyl transferase, family 2

NC_019435
(Lactococcus lactis UC509.9)

9e-44

631) GTCCBUS3UF5_23250
( YP_004982731.1 )

putative glycosyltransferase ykcC

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

1e-43

632) csbB
( YP_003485727.1 )

stress response protein

NC_013928
(Streptococcus mutans NN2025)

1e-43

633) csbB
( NP_722358.1 )

stress response protein

NC_004350
(Streptococcus mutans UA159)

1e-43

634) MCA2193
( YP_114614.1 )

glycosyl transferase family protein

NC_002977
(Methylococcus capsulatus Bath)

2e-43

635) csbB
( YP_006252087.1 )

putative stress response protein

NC_017768
(Streptococcus mutans LJ23)

2e-43

636) 2SCK8.01; SCK20.16
( NP_733651.1 )

sugar transferase

NC_003888
(Streptomyces coelicolor A3(2))

2e-43

637) SynWH7803_0218
( YP_001223941.1 )

glycosyl transferase family protein

NC_009481
(Synechococcus sp. WH 7803)

2e-43

638) SAB0653
( YP_416147.1 )

bactoprenol glucosyl transferase or stress response regulator

NC_007622
(Staphylococcus aureus RF122)

2e-43

639) LM5578_1014
( YP_003413129.1 )

hypothetical protein

NC_013766
(Listeria monocytogenes 08-5578)

3e-43

640) LM5923_0968
( YP_003416174.1 )

hypothetical protein

NC_013768
(Listeria monocytogenes 08-5923)

3e-43

641) LMRG_02032
( YP_005962064.1 )

glycosyltransferase

NC_017544
(Listeria monocytogenes 10403S)

3e-43

642) M642_02325
( YP_008271331.1 )

glycosyltransferase

NC_021823
(Listeria monocytogenes C1-387)

3e-43

643) lmo0933
( NP_464458.1 )

hypothetical protein

NC_003210
(Listeria monocytogenes EGD-e)

3e-43

644) LMLG_1421
( YP_005970761.1 )

glycosyl transferase family protein

NC_017547
(Listeria monocytogenes Finland 1988)

3e-43

645) LMKG_02359
( YP_005967852.1 )

glycosyl transferase family protein

NC_017546
(Listeria monocytogenes FSL R2-561)

3e-43

646) LMOG_00796
( YP_005964928.1 )

glycosyltransferase

NC_017545
(Listeria monocytogenes J0161)

3e-43

647) M639_12980
( YP_008297155.1 )

glycosyltransferase

NC_021837
(Listeria monocytogenes J2-031)

3e-43

648) BN418_1135
( YP_007603260.1 )

Uncharacterized glycosyltransferase ykcC

NC_020557
(Listeria monocytogenes La111)

3e-43

649) BN419_1137
( YP_007606392.1 )

Uncharacterized glycosyltransferase ykcC

NC_020558
(Listeria monocytogenes N53-1)

3e-43

650) LMOSLCC2372_0946
( YP_006684273.1 )

glycosyl transferase family protein

NC_018588
(Listeria monocytogenes SLCC2372)

3e-43

651) LMOSLCC2479_0945
( YP_006687208.1 )

glycosyl transferase family protein

NC_018589
(Listeria monocytogenes SLCC2479)

3e-43

652) LMOSLCC5850_0935
( YP_006695762.1 )

glycosyl transferase family protein

NC_018592
(Listeria monocytogenes SLCC5850)

3e-43

653) LMOSLCC7179_0913
( YP_006698606.1 )

glycosyl transferase family protein

NC_018593
(Listeria monocytogenes SLCC7179)

3e-43

654) Acfer_0817
( YP_003398520.1 )

family 2 glycosyl transferase

NC_013740
(Acidaminococcus fermentans DSM 20731)

4e-43

655) TKWG_06770
( YP_006378773.1 )

putative glycosyl transferase

NC_017964
(Advenella kashmirensis WT001)

5e-43

656) SPPN_07880
( YP_004768862.1 )

glycosyl transferase family protein

NC_015875
(Streptococcus pseudopneumoniae IS7493)

6e-43

657) KSE_39670
( YP_004905719.1 )

putative glycosyltransferase

NC_016109
(Kitasatospora setae KM-6054)

7e-43

658) RPE_0870
( YP_779806.1 )

glycosyl transferase family protein

NC_008435
(Rhodopseudomonas palustris BisA53)

9e-43

659) SYNW0167
( NP_896262.1 )

glycosyl transferase

NC_005070
(Synechococcus sp. WH 8102)

1e-42

660) SBI_01024
( YP_004959276.1 )

sugar transferase

NC_016582
(Streptomyces bingchenggensis BCW-1)

2e-42

661) M637_07335
( YP_008275264.1 )

bactoprenol glucosyl transferase

NC_021824
(Listeria monocytogenes J2-064)

2e-42

662) M643_14980
( YP_008282494.1 )

bactoprenol glucosyl transferase

NC_021826
(Listeria monocytogenes N1-011A)

2e-42

663) M641_09160
( YP_008299339.1 )

bactoprenol glucosyl transferase

NC_021838
(Listeria monocytogenes R2-502)

2e-42

664) LMOSLCC2482_0978
( YP_006692931.1 )

glycosyl transferase

NC_018591
(Listeria monocytogenes SLCC2482)

2e-42

665) LMOSLCC2540_0932
( YP_006678475.1 )

glycosyl transferase family protein

NC_018586
(Listeria monocytogenes SLCC2540)

2e-42

666) LMOSLCC2755_0934
( YP_006681384.1 )

glycosyl transferase family protein

NC_018587
(Listeria monocytogenes SLCC2755)

2e-42

667) rfaG3
( YP_004648887.1 )

group 2 glycosyl transferase

NC_015697
(Lactobacillus reuteri SD2112)

9e-43

668) Niako_6502
( YP_005012129.1 )

family 2 glycosyl transferase

NC_016609
(Niastella koreensis GR20-10)

2e-42

669) RSPPHO_01842
( YP_005417438.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_017059
(Rhodospirillum photometricum DSM 122)

3e-42

670) C270_02970
( YP_006795506.1 )

family 2 glycosyl transferase

NC_018673
(Leuconostoc carnosum JB16)

4e-42

671) SPD_1431
( YP_816888.1 )

glycosyl transferase family protein

NC_008533
(Streptococcus pneumoniae D39)

5e-42

672) SPH_1719
( YP_001695004.1 )

bactoprenol glucosyl transferase

NC_010380
(Streptococcus pneumoniae Hungary19A-6)

5e-42

673) SPNOXC_14100
( YP_006064820.1 )

membrane glycosyl transferase

NC_017592
(Streptococcus pneumoniae OXC141)

5e-42

674) SPP_1627
( YP_002738739.1 )

bactoprenol glucosyl transferase

NC_012467
(Streptococcus pneumoniae P1031)

5e-42

675) gtrB
( NP_359052.1 )

glycosil transferase

NC_003098
(Streptococcus pneumoniae R6)

5e-42

676) SPN034156_04970
( YP_007764820.1 )

membrane glycosyl transferase

NC_021006
(Streptococcus pneumoniae SNP034156)

5e-42

677) SPN034183_14080
( YP_007814974.1 )

membrane glycosyl transferase

NC_021028
(Streptococcus pneumoniae SNP034183)

5e-42

678) SPN994038_13970
( YP_007813152.1 )

membrane glycosyl transferase

NC_021026
(Streptococcus pneumoniae SNP994038)

5e-42

679) SPN994039_13980
( YP_007763825.1 )

membrane glycosyl transferase

NC_021005
(Streptococcus pneumoniae SNP994039)

5e-42

680) Geoth_1551
( YP_004587614.1 )

family 2 glycosyl transferase

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

1e-41

681) FI9785_242
( YP_003292394.1 )

putative glycosyl transferase

NC_013504
(Lactobacillus johnsonii FI9785)

6e-42

682) kw2_0087
( YP_008567764.1 )

glycosyl transferase GT2 family

NC_022369
(Lactococcus lactis KW2)

9e-42

683) LJ0168
( NP_964184.1 )

bactoprenol glucosyl transferase

NC_005362
(Lactobacillus johnsonii NCC 533)

1e-41

684) SE0477
( NP_764032.1 )

CsbB stress response protein

NC_004461
(Staphylococcus epidermidis ATCC 12228)

2e-41

685) SERP0363
( YP_187959.1 )

glycosyl transferase, group 2 family protein

NC_002976
(Staphylococcus epidermidis RP62A)

2e-41

686) SynRCC307_0406
( YP_001226662.1 )

glycosyl transferase family protein

NC_009482
(Synechococcus sp. RCC307)

2e-41

687) EHR_01935
( YP_006486262.1 )

glycosyl transferase

NC_018081
(Enterococcus hirae ATCC 9790)

2e-41

688) GY4MC1_1457
( YP_003988861.1 )

family 2 glycosyl transferase

NC_014650
(Geobacillus sp. Y4.1MC1)

2e-41

689) SSP2013
( YP_302103.1 )

glucosyl transferase

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

2e-41

690) SPNA45_00621
( YP_006701098.1 )

membrane glycosyl transferase

NC_018594
(Streptococcus pneumoniae A45)

2e-41

691) SPN23F_16200
( YP_002511514.1 )

membrane glycosyl transferase

NC_011900
(Streptococcus pneumoniae ATCC 700669)

2e-41

692) SPJ_1512
( YP_002736559.1 )

bactoprenol glucosyl transferase

NC_012466
(Streptococcus pneumoniae JJA)

2e-41

693) Vpar_1183
( YP_003312143.1 )

family 2 glycosyl transferase

NC_013520
(Veillonella parvula DSM 2008)

2e-41

694) INV104_13740
( YP_006062999.1 )

membrane glycosyl transferase

NC_017591
(Streptococcus pneumoniae INV104)

3e-41

695) S58_62950
( YP_007515856.1 )

putative glycosyl transferase, family 2

NC_020453
(Bradyrhizobium oligotrophicum S58)

3e-41

696) SP70585_1646
( YP_002740871.1 )

bactoprenol glucosyl transferase

NC_012468
(Streptococcus pneumoniae 70585)

3e-41

697) SPNINV200_14380
( YP_006066706.1 )

membrane glycosyl transferase

NC_017593
(Streptococcus pneumoniae INV200)

3e-41

698) RBR_05740
( YP_007780731.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021013
(Ruminococcus bromii L2-63)

3e-41

699) SP670_1690
( YP_003879846.1 )

bactoprenol glucosyl transferase

NC_014498
(Streptococcus pneumoniae 670-6B)

4e-41

700) gtrB
( YP_001836304.1 )

glycosyl transferase family protein

NC_010582
(Streptococcus pneumoniae CGSP14)

4e-41

701) SPG_1530
( YP_002038235.1 )

group 2 family glycosyl transferase

NC_011072
(Streptococcus pneumoniae G54)

4e-41

702) gtrB
( YP_006743741.1 )

family 2 glycosyl transferase

NC_018630
(Streptococcus pneumoniae gamPNI0373)

4e-41

703) MYY_1536
( YP_006253728.1 )

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase

NC_017769
(Streptococcus pneumoniae ST556)

4e-41

704) SPT_1546
( YP_002742947.1 )

bactoprenol glucosyl transferase

NC_012469
(Streptococcus pneumoniae Taiwan19F-14)

4e-41

705) arnC
( YP_003725284.1 )

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase

NC_014251
(Streptococcus pneumoniae TCH8431/19A)

4e-41

706) GY4MC1_1604
( YP_003988992.1 )

family 2 glycosyl transferase

NC_014650
(Geobacillus sp. Y4.1MC1)

5e-41

707) Geoth_1688
( YP_004587739.1 )

family 2 glycosyl transferase

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

5e-41

708) RPB_1844
( YP_485463.1 )

glycosyl transferase family protein

NC_007778
(Rhodopseudomonas palustris HaA2)

6e-41

709) MSA_13580
( YP_008087096.1 )

Bactoprenol glucosyl transferase

NC_021486
(Streptococcus agalactiae ILRI005)

1e-40

710) llmg_0114
( YP_001031476.1 )

glycosyl transferase family protein

NC_009004
(Lactococcus lactis MG1363)

1e-40

711) LLNZ_00570
( YP_006355556.1 )

glycosyl transferase family protein

NC_017949
(Lactococcus lactis NZ9000)

1e-40

712) K710_1454
( YP_008057152.1 )

putative sugar transferase

NC_021314
(Streptococcus iniae SF1)

1e-40

713) CC1_07560
( YP_007769040.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021009
(Coprococcus catus GD/7)

7e-41

714) ykoT
( YP_004639108.1 )

hypothetical protein

NC_015690
(Paenibacillus mucilaginosus KNP414)

8e-41

715) SP_1606
( NP_346050.1 )

glycosyl transferase family protein

NC_003028
(Streptococcus pneumoniae TIGR4)

1e-40

716) CFF8240_1389
( YP_892530.1 )

glycosyl transferase family protein

NC_008599
(Campylobacter fetus 82-40)

2e-40

717) RPD_4119
( YP_571239.1 )

glycosyl transferase family protein

NC_007958
(Rhodopseudomonas palustris BisB5)

2e-40

718) ybaI
( YP_007507413.1 )

glycosil transferase

NC_020450
(Lactococcus lactis IO-1)

3e-40

719) SPAP_1627
( YP_003877213.1 )

glycosyltransferase

NC_014494
(Streptococcus pneumoniae AP200)

3e-40

720) NIDE0738
( YP_003796432.1 )

glycosyl transferase family 2 protein

NC_014355
(Candidatus Nitrospira defluvii )

6e-40

721) Sca_2101
( YP_002635191.1 )

hypothetical protein

NC_012121
(Staphylococcus carnosus TM300)

1e-39

722) BACI_c54270
( YP_003795110.1 )

glycosyltransferase group 2 family protein

NC_014335
(Bacillus cereus CI)

8e-40

723) LA14_1285
( YP_007938132.1 )

Bactoprenol glucosyl transferase ; Glycosyltransferase, group 2 family protein

NC_021181
(Lactobacillus acidophilus La-14)

8e-40

724) LBA1283
( YP_194144.1 )

glycosyl transferase

NC_006814
(Lactobacillus acidophilus NCFM)

8e-40

725) YBT020_27100
( YP_005569060.1 )

glycosyl transferase family protein

NC_017200
(Bacillus thuringiensis YBT-020)

1e-39

726) llmg_0600
( YP_001031944.1 )

glycosyl transferase family protein

NC_009004
(Lactococcus lactis MG1363)

1e-39

727) LLNZ_03080
( YP_006356029.1 )

glycosyl transferase family protein

NC_017949
(Lactococcus lactis NZ9000)

1e-39

728) Hneap_1526
( YP_003263404.1 )

family 2 glycosyl transferase

NC_013422
(Halothiobacillus neapolitanus c2)

1e-39

729) LJP_0173
( YP_005861462.1 )

bactoprenol glucosyl transferase

NC_017477
(Lactobacillus johnsonii DPC 6026)

2e-39

730) rpoB
( YP_006831488.1 )

DNA-directed RNA polymerase subunit beta

NC_018693
(Bacillus thuringiensis MC28)

2e-39

731) BAA_5713
( YP_002869643.1 )

glycosyl transferase, group 2 family

NC_012659
(Bacillus anthracis A0248)

9e-40

732) BA_5684
( NP_847830.1 )

glycosyl transferase group 2 family protein

NC_003997
(Bacillus anthracis Ames)

9e-40

733) GBAA_5684
( YP_022364.1 )

group 2 family glycosyl transferase

NC_007530
(Bacillus anthracis Ames Ancestor)

9e-40

734) BAMEG_5730
( YP_002818212.1 )

glycosyl transferase family protein

NC_012581
(Bacillus anthracis CDC 684)

9e-40

735) H9401_5427
( YP_006212480.1 )

Glycosyltransferase, group 2 family protein

NC_017729
(Bacillus anthracis H9401)

9e-40

736) BAS5287
( YP_031525.1 )

glycosyl transferase

NC_005945
(Bacillus anthracis Sterne)

9e-40

737) BCA_5585
( YP_002752794.1 )

glycosyl transferase, group 2 family protein

NC_012472
(Bacillus cereus 03BB102)

9e-40

738) BCAH820_5528
( YP_002454448.1 )

glycosyl transferase family protein

NC_011773
(Bacillus cereus AH820)

9e-40

739) bcf_27280
( YP_005122062.1 )

Glycosyltransferase

NC_016779
(Bacillus cereus F837/76)

9e-40

740) BT9727_5112
( YP_039422.1 )

glycosyltransferase, group 2 family protein

NC_005957
(Bacillus thuringiensis 97-27)

9e-40

741) BALH_4936
( YP_897614.1 )

glycosyltransferase, group 2 family protein

NC_008600
(Bacillus thuringiensis Al Hakam)

9e-40

742) TC41_2715
( YP_005519128.1 )

family 2 glycosyl transferase

NC_017167
(Alicyclobacillus acidocaldarius Tc-4-1)

2e-39

743) CLL_A2508
( YP_001886697.1 )

bactoprenol glucosyl transferase

NC_010674
(Clostridium botulinum Eklund 17B)

3e-39

744) lhv_0838
( YP_001577252.1 )

bactoprenol glucosyl transferase

NC_010080
(Lactobacillus helveticus DPC 4571)

3e-39

745) Pjdr2_0086
( YP_003008853.1 )

family 2 glycosyl transferase

NC_012914
(Paenibacillus sp. JDR-2)

4e-39

746) LVIS_1575
( YP_795684.1 )

glycosyltransferase-like protein

NC_008497
(Lactobacillus brevis ATCC 367)

4e-39

747) lhe_0809
( YP_008236246.1 )

glycosyltransferase

NC_021744
(Lactobacillus helveticus CNRZ32)

5e-39

748) WANG_0857
( YP_004562654.1 )

bactoprenol glucosyl transferase

NC_015602
(Lactobacillus kefiranofaciens ZW3)

5e-39

749) LGAS_0170
( YP_814020.1 )

glycosyltransferase-like protein

NC_008530
(Lactobacillus gasseri ATCC 33323)

1e-38

750) BMD_4081
( YP_003599261.1 )

bactoprenol glucosyl transferase

NC_014103
(Bacillus megaterium DSM 319)

1e-38

751) BMWSH_1134
( YP_005493327.1 )

glycosyltransferase ykcC

NC_017138
(Bacillus megaterium WSH-002)

1e-38

752) BCZK5129
( YP_086698.1 )

glycosyltransferase, group 2 family protein

NC_006274
(Bacillus cereus E33L)

7e-39

753) LAF_1409
( YP_001844225.1 )

glycosyltransferase

NC_010610
(Lactobacillus fermentum IFO 3956)

1e-38

754) CLH_2276
( YP_001921657.1 )

bactoprenol glucosyl transferase

NC_010723
(Clostridium botulinum Alaska E43)

2e-38

755) LBHH_1315
( YP_005850496.1 )

Glycosyltransferase related enzyme

NC_017467
(Lactobacillus helveticus H10)

2e-38

756) smi_0669
( YP_003445786.1 )

glycosyl transferase

NC_013853
(Streptococcus mitis B6)

2e-38

757) str1485
( YP_141832.1 )

glycosyl transferase family protein

NC_006449
(Streptococcus thermophilus CNRZ1066)

2e-38

758) STER_1446
( YP_820804.1 )

glycosyl transferase, family 2

NC_008532
(Streptococcus thermophilus LMD-9)

2e-38

759) STND_1417
( YP_006002960.1 )

glycosyltransferase

NC_017563
(Streptococcus thermophilus ND03)

2e-38

760) AZC_1472
( YP_001524388.1 )

glycosyltransferase

NC_009937
(Azorhizobium caulinodans ORS 571)

2e-38

761) Alide_1405
( YP_004126054.1 )

family 2 glycosyl transferase

NC_014910
(Alicycliphilus denitrificans BC)

4e-38

762) Alide2_3511
( YP_004389355.1 )

family 2 glycosyl transferase

NC_015422
(Alicycliphilus denitrificans K601)

4e-38

763) BC5432
( NP_835093.1 )

bactoprenol glucosyl transferase

NC_004722
(Bacillus cereus ATCC 14579 )

4e-38

764) BCB4264_A5555
( YP_002370208.1 )

bactoprenol glucosyl transferase

NC_011725
(Bacillus cereus B4264)

4e-38

765) BMB171_C5027
( YP_003667555.1 )

bactoprenol glucosyl transferase

NC_014171
(Bacillus thuringiensis BMB171)

4e-38

766) csbB
( YP_006930218.1 )

putative glycosyltransferase CsbB

NC_018877
(Bacillus thuringiensis Bt407)

4e-38

767) CT43_CH5472
( YP_005575416.1 )

bactoprenol glucosyl transferase

NC_017208
(Bacillus thuringiensis CT-43)

4e-38

768) H175_ch5565
( YP_007482022.1 )

Glycosyltransferase

NC_020376
(Bacillus thuringiensis IS5056)

4e-38

769) SH2190
( YP_254105.1 )

hypothetical protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

4e-38

770) Isop_3703
( YP_004180808.1 )

family 2 glycosyl transferase

NC_014962
(Isosphaera pallida ATCC 43644)

4e-38

771) LC40_0903
( YP_005848971.1 )

glycosyltransferase

NC_017465
(Lactobacillus fermentum CECT 5716)

4e-38

772) Sinac_3878
( YP_007203802.1 )

glycosyl transferase family protein

NC_019892
(Singulisphaera acidiphila DSM 18658)

6e-38

773) MY9_0949
( YP_006230744.1 )

glycosyl transferase family protein

NC_017743
(Bacillus sp. JS)

1e-37

774) PECL_428
( YP_005004407.1 )

glycosyl transferase 2 family protein

NC_016605
(Pediococcus claussenii ATCC BAA-344)

1e-37

775) RUM_23000
( YP_007830301.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021039
(Ruminococcus champanellensis 18P13)

7e-38

776) csbB
( YP_006712285.1 )

glycosyl transferase CsbB

NC_006322
(Bacillus licheniformis DSM 13)

1e-37

777) csbB
( YP_078105.1 )

stress response protein, glycosyl transferase family 2

NC_006270
(Bacillus licheniformis DSM 13)

1e-37

778) Amet_0306
( YP_001318196.1 )

glycosyl transferase family protein

NC_009633
(Alkaliphilus metalliredigens QYMF)

2e-37

779) CL2_24110
( YP_007790259.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021016
(butyrate-producing bacterium SSC/2)

2e-37

780) GWCH70_1941
( YP_002949940.1 )

ribonuclease III

NC_012793
(Geobacillus sp. WCH70)

2e-37

781) RPC_4719
( YP_534560.1 )

glycosyl transferase family protein

NC_007925
(Rhodopseudomonas palustris BisB18)

2e-37

782) SUB0703
( YP_002562042.1 )

glycosyl transferase

NC_012004
(Streptococcus uberis 0140J)

4e-37

783) SLGD_02126
( YP_003472341.1 )

CsbB stress response protein

NC_013893
(Staphylococcus lugdunensis HKU09-01)

1e-36

784) llh_2610
( YP_005875121.1 )

Bactoprenol glucosyl transferase, Glycosyltransferase, group 2 family protein

NC_017492
(Lactococcus lactis A76)

1e-36

785) GK2052
( YP_147905.1 )

glycosyltransferase

NC_006510
(Geobacillus kaustophilus HTA426)

3e-36

786) SLUG_20980
( YP_005761213.1 )

putative glucosyltransferase

NC_017353
(Staphylococcus lugdunensis N920143)

4e-36

787) LCGT_0521
( YP_004778698.1 )

glucosyltransferase

NC_015930
(Lactococcus garvieae ATCC 49156)

4e-36

788) Bcer98_3950
( YP_001377129.1 )

glycosyl transferase family protein

NC_009674
(Bacillus cytotoxicus NVH 391-98)

6e-36

789) SSU05_1004
( YP_001198370.1 )

glycosyltransferase

NC_009442
(Streptococcus suis 05ZYH33)

2e-35

790) Csac_0268
( YP_001179106.1 )

ribonuclease III

NC_009437
(Caldicellulosiruptor saccharolyticus DSM 8903)

4e-35

791) Desal_3671
( YP_002993256.1 )

family 2 glycosyl transferase

NC_012881
(Desulfovibrio salexigens DSM 2638)

7e-35

792) LBFF_1538
( YP_007995713.1 )

Glycosyl transferase family 2

NC_021235
(Lactobacillus fermentum F-6)

5e-34

793) ybaI
( YP_007507396.1 )

glycosil transferase

NC_020450
(Lactococcus lactis IO-1)

2e-33

794) Ssal_00592
( YP_006067825.1 )

glycosyl transferase family protein

NC_017594
(Streptococcus salivarius 57.I)

2e-33

795) LCRIS_00804
( YP_003601276.1 )

bactoprenol glucosyl transferase

NC_014106
(Lactobacillus crispatus ST1)

4e-33

796) csbB
( YP_004727370.1 )

putative glycosyltransferase csbB

NC_015760
(Streptococcus salivarius CCHSS3)

5e-33

797) ybaI
( YP_005867495.1 )

glycosyl transferase

NC_017486
(Lactococcus lactis CV56)

9e-33

798) ybaI
( NP_266263.1 )

glycosyl transferase

NC_002662
(Lactococcus lactis IL1403)

9e-33

799) ybaI
( YP_003352550.1 )

family 2 glycosyltransferase

NC_013656
(Lactococcus lactis KF147)

2e-32

800) EHR_10040
( YP_006487795.1 )

glycosyl transferase

NC_018081
(Enterococcus hirae ATCC 9790)

5e-32

801) csbB
( YP_006070683.1 )

putative glycosyltransferase csbB

NC_017595
(Streptococcus salivarius JIM8777)

7e-32

802) SGGB_1365
( YP_006034184.1 )

serotype determinant, glycosyltransferase

NC_017576
(Streptococcus gallolyticus ATCC 43143)

3e-31

803) SGGBAA2069_c13610
( YP_004288277.1 )

glucosyltransferase

NC_015215
(Streptococcus gallolyticus ATCC BAA-2069)

3e-31

804) GALLO_1371
( YP_003430790.1 )

glycosyltransferase

NC_013798
(Streptococcus gallolyticus UCN34)

3e-31

805) SGPB_1292
( YP_004559426.1 )

serotype determinant, glycosyltransferase

NC_015600
(Streptococcus pasteurianus ATCC 43144)

3e-31

806) TEH_16060
( YP_004887097.1 )

glucosyltransferase

NC_016052
(Tetragenococcus halophilus NBRC 12172)

8e-31

807) Micau_1952
( YP_003835076.1 )

family 2 glycosyl transferase protein

NC_014391
(Micromonospora aurantiaca ATCC 27029)

3e-29

808) ML5_2059
( YP_004081736.1 )

family 2 glycosyl transferase

NC_014815
(Micromonospora sp. L5)

3e-29

809) RO1_20700
( YP_007778379.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021012
(Roseburia intestinalis XB6B4)

1e-28

810) Clopa_3035
( YP_007941540.1 )

glycosyl transferase

NC_021182
(Clostridium pasteurianum BC1)

6e-29

811) BLLJ_1809
( YP_004221566.1 )

hypothetical protein

NC_015067
(Bifidobacterium longum JCM 1217)

8e-29

812) ROI_08020
( YP_007831079.1 )

Glycosyltransferases involved in cell wall biogenesis

NC_021040
(Roseburia intestinalis M50/1)

2e-28

813) csbB
( YP_005094927.1 )

Bactoprenol glucosyl transferase

NC_016749
(Streptococcus macedonicus ACA-DC 198)

4e-28

814) SMUGS5_03690
( YP_006490055.1 )

glycosyltransferase

NC_018089
(Streptococcus mutans GS-5)

3e-27

815) SmuNN2025_1181
( YP_003485099.1 )

glycosyltransferase

NC_013928
(Streptococcus mutans NN2025)

3e-27

816) SMU_833
( NP_721243.1 )

glycosyltransferase

NC_004350
(Streptococcus mutans UA159)

3e-27

817) STP_0618
( YP_004478738.1 )

glycosyl transferase family protein

NC_015558
(Streptococcus parauberis KCTC 11537)

3e-27

818) HCN_1803
( YP_006236082.1 )

hypothetical protein

NC_017761
(Helicobacter cinaedi PAGU611)

2e-25

819) Y1U_C1378
( YP_006340492.1 )

glycosyl transferase family protein

NC_017927
(Streptococcus thermophilus MN-ZLW-002)

3e-24

820) HD73_5847
( YP_007424945.1 )

Stress response protein

NC_020238
(Bacillus cereus HD73)

3e-23

• Sequence Alignments

1) yfdH in NC_012759


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  467 bits (1759),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 274/306 (90%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF+ELK+YEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDA+IPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIKL+PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVA  240
            LSWVGG+TD+VEYVRAER+AG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYI  300
            F+YGAWMI+DT++FGN+VRGYPSLLVSILFLGG+Q+IGIGVLGEYIGR Y+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKRVKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

2) EcDH1_1307 in NC_017625


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  467 bits (1759),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 274/306 (90%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF+ELK+YEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDA+IPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIKL+PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVA  240
            LSWVGG+TD+VEYVRAER+AG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYI  300
            F+YGAWMI+DT++FGN+VRGYPSLLVSILFLGG+Q+IGIGVLGEYIGR Y+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKRVKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

3) yfdH in NC_017638


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  467 bits (1759),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 274/306 (90%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF+ELK+YEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDA+IPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIKL+PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVA  240
            LSWVGG+TD+VEYVRAER+AG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYI  300
            F+YGAWMI+DT++FGN+VRGYPSLLVSILFLGG+Q+IGIGVLGEYIGR Y+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKRVKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

4) yfdH in NC_010473


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  467 bits (1759),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 274/306 (90%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF+ELK+YEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDA+IPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIKL+PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVA  240
            LSWVGG+TD+VEYVRAER+AG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYI  300
            F+YGAWMI+DT++FGN+VRGYPSLLVSILFLGG+Q+IGIGVLGEYIGR Y+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKRVKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

5) gtrB in NC_000913


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  467 bits (1759),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 274/306 (90%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF+ELK+YEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDA+IPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIKL+PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVA  240
            LSWVGG+TD+VEYVRAER+AG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYI  300
            F+YGAWMI+DT++FGN+VRGYPSLLVSILFLGG+Q+IGIGVLGEYIGR Y+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKRVKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

6) yfdH in NC_007779


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  467 bits (1759),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 274/306 (90%), Positives = 300/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF+ELK+YEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDA+IPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIKL+PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVA  240
            LSWVGG+TD+VEYVRAER+AG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYI  300
            F+YGAWMI+DT++FGN+VRGYPSLLVSILFLGG+Q+IGIGVLGEYIGR Y+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKRVKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

7) gtrBI in NC_004741


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  453 bits (1707),  Expect = 4e-129, Method: Compositional matrix adjust.
 Identities = 298/306 (98%), Positives = 305/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240
            LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSilflggvqligigvlgEYIGRIYIEVKNRPKYI  300
            FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+E K+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKKSHR  306
            +KK+++
Sbjct  301  LKKGRK  306

8) gtrBI in NC_004337


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  453 bits (1707),  Expect = 4e-129, Method: Compositional matrix adjust.
 Identities = 298/306 (98%), Positives = 305/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240
            LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSilflggvqligigvlgEYIGRIYIEVKNRPKYI  300
            FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+E K+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKKSHR  306
            +KK+++
Sbjct  301  LKKGRK  306

9) gtrB in NC_008258


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  451 bits (1699),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 297/306 (98%), Positives = 304/306 (99%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240
            LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSilflggvqligigvlgEYIGRIYIESKHRPKYI  300
            FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+E+K RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKQ  306
            +K+ ++
Sbjct  301  LKKGRK  306

10) SFxv_0355 in NC_017328


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  447 bits (1684),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 291/305 (96%), Positives = 303/305 (99%), Gaps = 0/305 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHTTGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDH++GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180
            SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYVRTERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240
            LSWVGGQTDVVEYVR+ERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDTIVFGNPVRGYPSMLVSilflggvqligigvlgEYIGRIYLETKSRPRYL  300
            FLYGAWMIIDT+VFGNPVRGYPS+LVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKSRK  305
            +K  +
Sbjct  301  LKKGR  305

11) SEEB0189_16490 in NC_021844


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  429 bits (1614),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 273/303 (91%), Positives = 294/303 (98%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIFDTLAFGNAVRGYPSLLVSilflggiqligigvlgEYIGRIYIETKARPKYI  300
            FLYGAWMI+DTL FGN+VRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+ETK+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKK  303
            +KK
Sbjct  301  LKK  303

12) yfdH in NC_011740


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  429 bits (1615),  Expect = 8e-122, Method: Compositional matrix adjust.
 Identities = 273/304 (90%), Positives = 296/304 (98%), Gaps = 0/304 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINDLAISDPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN LA+SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDSRLKRKSAEWFYKLHNKISNPKIEENVGDFRLMSRNVVENIKLMPERNLFMKGV  180
            SDRSTD+RLKRK+AEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLLVAGLS  240
            LSWVGG+TDVVEY RAERVAG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL+VA++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMIADKLLFGNNVPGYPSLLVSilflggvqligigvlgEYIGRIYIESKGRPRYL  300
            F+YGAWMI D L+FGN V GYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+E+K+RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKKG  304
            LKKG
Sbjct  301  LKKG  304

13) SEEB0189_16520 in NC_021844


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  428 bits (1613),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 272/302 (91%), Positives = 293/302 (98%), Gaps = 0/302 (0%)

Query  1    MKVSLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MK+SLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIFDTLAFGNAVRGYPSLLVSilflggiqligigvlgEYIGRIYIETKARPKYI  300
            FLYGAWMI+DTL FGN+VRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+ETK+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LK  302
            LK
Sbjct  301  LK  302

14) yfdH in NC_012125


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  428 bits (1611),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 271/303 (90%), Positives = 293/303 (97%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSNDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVIENIKLMPERNLFMKGV  180
            SDRS DGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREV+ENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIFDTLAFGNAVRGYPSLLVSilflggiqligigvlgEYIGRIYIETKARPKYI  300
            FLYGAWMI+DTL FGN+VRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+ETK+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKK  303
            +KK
Sbjct  301  LKK  303

15) SBOV05121 in NC_022241


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  428 bits (1611),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 295/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGHSDVVEYARAQRVAGNTKFNGWKLWNLAIEGITSFSTFPLRMWTYIGLVVAGMA  240
            LSWVGG++DVVEY RA+RVAG +KFNGWKLWNLA+EGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTLAFGNPVRGYPSLLVSilflggvqligigvlgEYIGRIYIETKKRPKYL  300
            F+YGAWMI+DTL FGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+ETK RPKY+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKDIKK  306
            LK  +K
Sbjct  301  LKKGRK  306

16) SNSL254_A0608 in NC_011080


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  428 bits (1611),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 295/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGHSDVVEYARAQRVAGNTKFNGWKLWNLAIEGITSFSTFPLRMWTYIGLVVAGMA  240
            LSWVGG++DVVEY RA+RVAG +KFNGWKLWNLA+EGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTLAFGNPVRGYPSLLVSilflggvqligigvlgEYIGRIYIETKKRPKYL  300
            F+YGAWMI+DTL FGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+ETK RPKY+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKDIKK  306
            LK  +K
Sbjct  301  LKKGRK  306

17) SN31241_15600 in NC_021902


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  428 bits (1611),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 295/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGHSDVVEYARAQRVAGNTKFNGWKLWNLAIEGITSFSTFPLRMWTYIGLVVAGMA  240
            LSWVGG++DVVEY RA+RVAG +KFNGWKLWNLA+EGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAWMILDTLAFGNPVRGYPSLLVSilflggvqligigvlgEYIGRIYIETKKRPKYL  300
            F+YGAWMI+DTL FGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+ETK RPKY+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKDIKK  306
            LK  +K
Sbjct  301  LKKGRK  306

18) gtrB in NC_006905


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  427 bits (1608),  Expect = 3e-121, Method: Compositional matrix adjust.
 Identities = 272/302 (91%), Positives = 295/302 (98%), Gaps = 0/302 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESLINALAVSDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATES+INALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPRLIDKWQSGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIP+LI+KWQ+GA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVIENIKLMPERNLFMKGV  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSREV+ENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWIIFDTLAFGNAVRGYPSLLVSilflggiqligigvlgEYIGRIYIETKARPKYI  300
            FLYGAW+I+DTL FGN+VRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+ETK+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LK  302
            LK
Sbjct  301  LK  302

19) yfdH in NC_012125


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  427 bits (1606),  Expect = 5e-121, Method: Compositional matrix adjust.
 Identities = 270/302 (90%), Positives = 293/302 (98%), Gaps = 0/302 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPRLIDKWQSGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIP+LI+KWQ+GA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVIENIKLMPERNLFMKGV  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSREV+ENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIFDTLAFGNAVRGYPSLLVSilflggiqligigvlgEYIGRIYIETKARPKYI  300
            FLYGAWMI+DTL FGN+VRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+ETK+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LK  302
            LK
Sbjct  301  LK  302

20) yfdH in NC_006905


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  426 bits (1604),  Expect = 6e-121, Method: Compositional matrix adjust.
 Identities = 270/303 (90%), Positives = 293/303 (97%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSNDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVIENIKLMPERNLFMKGV  180
            SDRS DGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREV+ENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWIIFDTLAFGNAVRGYPSLLVSilflggiqligigvlgEYIGRIYIETKARPKYI  300
            FLYGAW+I+DTL FGN+VRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+ETK+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKK  303
            +KK
Sbjct  301  LKK  303

21) yfdH in NC_006905


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  426 bits (1604),  Expect = 7e-121, Method: Compositional matrix adjust.
 Identities = 270/302 (90%), Positives = 292/302 (97%), Gaps = 0/302 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSNDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVIENIKLMPERNLFMKGV  180
            SDRS DGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREV+ENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWIIFDTLAFGNAVRGYPSLLVSilflggiqligigvlgEYIGRIYIETKARPKYI  300
            FLYGAW+I+DTL FGN+VRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+ETK+RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LK  302
            LK
Sbjct  301  LK  302

22) CKO_01844 in NC_009792


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  425 bits (1601),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLIVPVFNEEATIPIFYKTVREFDELKQHEVEIVFINDGSKDTTESIINALAVSDPL  60
            MKISL+VPVFNEE +IP+FYKTVREF+ELK  EVEIVFINDGSKD+TESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VMPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  TDRSTDGRLKRKTAEWFYKLHNKISNPQIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            +DRSTDGRLKRKTAEWFYKLHNKIS P+IEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARGERVAGDSKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFVAGLS  240
            LSWVGG+TDVVEY R+ERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLFVA++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIVDKLFFGNSVPGYPSLLVSilflggiqligigvlgEYIGRIYIETKKRPKYI  300
            FLYGAWMI+D L FGN+V GYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LGKRKK  306
            L K +K
Sbjct  301  LKKGRK  306

23) CFSAN002050_09405 in NC_021818


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  425 bits (1601),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 271/305 (89%), Positives = 293/305 (97%), Gaps = 0/305 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIFDTLAFGNAVRGYPSLLVSilflggvqligigvlgEYIGRIYVETKKRPRFL  300
            FLYGAWMI+DTL FGN+VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+ETK RP+++
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKDKK  305
            LK  +
Sbjct  301  LKKGR  305

24) Entas_2654 in NC_015968


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  425 bits (1601),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 266/305 (88%), Positives = 292/305 (96%), Gaps = 0/305 (0%)

Query  1    MKISLVVPVFNEEDAIPLFYKAVREFEALKQYAIEIVFINDGSKDATESIIRTLAVADPL  60
            MKISLVVPVFNEE+AIP+FYK+VREF+ LK Y +EIVFINDGSKDATESII +LAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  TDRSTDGRLKRKTAEWFYKLHNKISNPQIEENVGDFRLMSREVVDNIKKMPERNLFMKGV  180
            +DRSTDGRLKRKTAEWFYKLHNKIS P+IEENVGDFRLMSREVV+NIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGTTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLLVAGIA  240
            LSWVGG TDVVEY RAERVAG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL+VA+I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIVDTLAFGNPVRGYPSMLVSilflggvqligigvlgEYIGRIYVEVKNRPRYI  300
            FLYGAWMI+DTL FGNPVRGYPS+LVSILFLGGVQLIGIGVLGEYIGRIY+E K+RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LSRKK  305
            L + +
Sbjct  301  LKKGR  305

25) gtrB in NC_013971


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  423 bits (1593),  Expect = 4e-120, Method: Compositional matrix adjust.
 Identities = 248/306 (82%), Positives = 284/306 (93%), Gaps = 0/306 (0%)

Query  1    MKISLIVPVFNEEDTIPIFYKTVRELTELKKHDIEIVFINDGSKDATESIINALAVADKL  60
            MKISL+VPVFNEE++IP+FYKTVRE+ ELK  ++EIVFINDGSKDATESIINALAV+D L
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPAICAGLKYSTGEAVIPIDVDLQDPIEVIPLMIDKWLSGADIVLAKR  120
            VVP+SFTRNFGKEPA+ AGL  ++G+AVIPIDVDLQDPIEVIP +I+KW +GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGKLKRKTAEWFYKFHNKISDPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTDG+LKRKTAEWFYK+HNKIS PKIEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGCTDVIEYTRAGRIAGKSKFNGWKLWNLALEGITSFSTFPLRIWTYIGFFAAALS  240
            LSWVGG TDV+EY RA R+AG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+F A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMITDKIVWGNPVAGYPSIIVSILFLGGVQLTGIGVLGEYIGRIYIETKQRPRYV  300
            FLYGAWMI D +V GNPV GYPS++VSILFLGGVQL GIGVLGEYIGRIY+ETK RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKKEKK  306
            +KK +K
Sbjct  301  LKKGRK  306

26) gtrB3 in NC_013961


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  423 bits (1593),  Expect = 4e-120, Method: Compositional matrix adjust.
 Identities = 248/306 (82%), Positives = 284/306 (93%), Gaps = 0/306 (0%)

Query  1    MKISLIVPVFNEEDTIPIFYKTVRELTELKKHDIEIVFINDGSKDATESIINALAVADKL  60
            MKISL+VPVFNEE++IP+FYKTVRE+ ELK  ++EIVFINDGSKDATESIINALAV+D L
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPAICAGLKYSTGEAVIPIDVDLQDPIEVIPLMIDKWLSGADIVLAKR  120
            VVP+SFTRNFGKEPA+ AGL  ++G+AVIPIDVDLQDPIEVIP +I+KW +GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGKLKRKTAEWFYKFHNKISDPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTDG+LKRKTAEWFYK+HNKIS PKIEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGCTDVIEYTRAGRIAGKSKFNGWKLWNLALEGITSFSTFPLRIWTYIGFFAAALS  240
            LSWVGG TDV+EY RA R+AG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+F A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMITDKIVWGNPVAGYPSIIVSILFLGGVQLTGIGVLGEYIGRIYIETKQRPRYV  300
            FLYGAWMI D +V GNPV GYPS++VSILFLGGVQL GIGVLGEYIGRIY+ETK RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKKEKK  306
            +KK +K
Sbjct  301  LKKGRK  306

27) yfdH in NC_013282


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  422 bits (1587),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 265/306 (87%), Positives = 297/306 (98%), Gaps = 0/306 (0%)

Query  23   MKISLVVPVFNEEDTIPIFYKTVREYEPLKSFEVEIVFINDGSKDATESIINALAVSDPL  82
            MKISLVVPVFNEE++IP+FYKTVRE++ LK++EVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  83   VVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPQLIERWQAGADVVLAKR  142
            VVPLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIP+LIE+WQAGA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  143  TDRSTDGRLKRKSAEMFYKLHNKISNPRIEENVGDFRLMSREIVDNIRLLPERNLFMKGV  202
            +DRSTDGRLKRK+AE FYKLHNKIS P+IEENVGDFRLMSRE+V+NI+LLPERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  203  LSWVGGRTDVVEYSRAERVAGSTKFNGWKLWNLALEGITSFSTFPLRVWTYIGLIVAGVA  262
            LSWVGG+TDVVEY RAERVAG +KFNGWKLWNLALEGITSFSTFPLRVWTYIGL+VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  263  FVYGAWMIIDTLAFGNAVRGYPSLLVSilflggvqligigvlgEYIGRIYVESKQRPRFI  322
            F+YGAWMIIDTL FGN+VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+E+K RP++I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  323  LRKRNK  328
            L+K  K
Sbjct  301  LKKGRK  306

28) yfdH in NC_011751


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  420 bits (1582),  Expect = 4e-119, Method: Compositional matrix adjust.
 Identities = 262/306 (86%), Positives = 289/306 (95%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEGLQQHEVEIVFINDGSKDATESIINELAVADPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ L+  EVEIVFINDGSKDATESIIN LAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVSLSFTRNFGKEPALFAGLDHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VV+LSFTRNFGKEPALFAGLDHA+G+A+IPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTD+RLKRK+AEWFYKLHNKIS P+IEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFIACIS  240
            LSWVGG+TDVVEY RAERVAG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FTYGSWMIIDKLIFGNNVPGYPSILVSilflggvqligigvlgEYIGRIYIEVKQRPRYV  300
            F YG+WMIID L+FGN V GYPS+LVSILFLGGVQLIGIGVLGEYIGRIY+E K RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKDQKN  306
            LK  ++
Sbjct  301  LKKGRK  306

29) ES15_1693 in NC_017933


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  419 bits (1576),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 262/303 (87%), Positives = 295/303 (98%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREYEPLKSFDVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEE++IP+FYKTVRE++ LK+++VEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPQLIERWQAGADVVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIP+LIE+WQAGA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  TDRSTDGRLKRKSAEMFYKLHNKISNPKIEENVGDFRLMSREVVENIKLLPERNLFMKGV  180
            +DRSTDGRLKRK+AE FYKLHNKIS PKIEENVGDFRLMSREVVENIKLLPERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGRTDIVEYTRAERIAGNTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLVVAGFA  240
            LSWVGG+TD+VEY RAER+AG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FMYGAWMIVDTLAFGNPVRGYPSLLVSilflggiqligigvlgEYIGRIYIEVKNRPRFI  300
            F+YGAWMI+DTL FGNPVRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+E K+RP++I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKR  303
            +K+
Sbjct  301  LKK  303

30) gtrB in NC_017626


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  419 bits (1577),  Expect = 8e-119, Method: Compositional matrix adjust.
 Identities = 264/306 (87%), Positives = 290/306 (95%), Gaps = 1/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEGLQQHEVEIVFINDGSKDATESIINELAVADPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ L+  EVEIVFINDGSKDATESIIN LAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVSLSFTRNFGKEPALFAGLDHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VV+LSFTRNFGKEPALFAGLDHA+G+A+IPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTD+RLKRK+AEWFYKLHNKIS P+IEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFIACIS  240
            LSWVGG+TDVVEY RAERVAG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FTYGSWMIIDKLIFGNNVPGYPSILVSilflggiqligigvlgEYIGRIYIEVKQRPKYV  300
            F YG+WMIID L+FGN V GYPS+LVSILFLGG+QLIGIGVLGEYIGRIY+E K RPKY+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  L-KGKK  305
            L KG+K
Sbjct  301  LKKGRK  306

31) ESA_03027 in NC_009778


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  419 bits (1576),  Expect = 9e-119, Method: Compositional matrix adjust.
 Identities = 262/303 (87%), Positives = 295/303 (98%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREYEPLKSFEVEIVFINDGSKDATESIINALAVSDPL  60
            MKISLVVPVFNEE++IP+FYKTVRE++ LK++EVEIVFINDGSKDATESIINALAVSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPQLIERWQAGADVVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIP+LIE+WQAGA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  TDRSTDGRLKRKSAEMFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLLPERNLFMKGV  180
            +DRSTDGRLKRK+AE FYKLHNKIS PKIEENVGDFRLMSR+VVENIKLLPERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGRTDIVEYTRAERIAGNTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLVVAGFA  240
            LSWVGG+TD+VEY RAER+AG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGL VA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FMYGAWMIVDTLAFGNPVRGYPSLLVSilflggiqligigvlgEYIGRIYIEVKNRPRFI  300
            F+YGAWMI+DTL FGNPVRGYPSLLVSILFLGG+QLIGIGVLGEYIGRIY+E K+RP++I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKR  303
            +K+
Sbjct  301  LKK  303

32) ECL_03179 in NC_014121


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  416 bits (1567),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 262/306 (86%), Positives = 292/306 (96%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEDLKQHEVEIVFINDGSKDATESIINAIAIADPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF++LK  EVEIVFINDGSKDATESIINA+A++DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSFTRNFGKEPALFAGLDHATGEAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            VVPLSFTRNFGKEPALFAGLDHA+G+AVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMSREVVENIKLMPERNLFMKGV  180
            SDRSTD+RLKRK+AEWFYKLHNKIS P+IEENVGDFRLMSREVVENIKL+PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRVWTYIGLGVSMFA  240
            LSWVGG+TDVVEY RAERVAG +KFNGWKLWNLALEGITSFSTFPLRVWTYIGL V+ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYAAWMVVDKLIWGNPVPGYPSLMTAilflggvqligigvlgEYIGRIYVEVKNRPKYL  300
            F+Y+AWM++D L+ GNPV GYPSL+ +ILFLGGVQLIGIGVLGEYIGRIY+E K+RPKY+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKRKTK  306
            LK+  K
Sbjct  301  LKKGRK  306

33) ECENHK_05585 in NC_018405


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  415 bits (1561),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 264/306 (87%), Positives = 293/306 (96%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEEAIPIFYKTVREFEDLQQHEVEIVFINDGSKDATESIINALAVADPL  60
            MKISLVVPVFNEEEAIP+FYKTVREF++L+  EVEIVFINDGSKDATESIINALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPYLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDA+IPIDVDLQDPIEVIP LIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  TDRSADGRLKRKTAEWFYKLHNKISNPQIEENVGDYRLMSRDVVENIKQMQERNLFMKGI  180
            +DRS+DGRLKRKTAEWFYKLHNKIS P+IEENVGD+RLMSR+VVENIK + ERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGRTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFVAGMA  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLFVA+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGACMIVDTLAFGNPVRGYPSMLVSilflggiqligigvlgEYIGRIYVEVKGRPRYI  300
            F+YGA MI+DTL FGNPVRGYPS+LVSILFLGG+QLIGIGVLGEYIGRIY+E K+RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNELK  306
            +K+  K
Sbjct  301  LKKGRK  306

34) SeD_A0659 in NC_011205


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  411 bits (1546),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 271/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDTVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GD+VIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TD+VEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPSLLVSilflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVSILFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

35) SeAg_B4458 in NC_011149


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  411 bits (1548),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 254/306 (84%), Positives = 288/306 (95%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYDVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGSSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

36) SEEH1578_07185 in NC_021810


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  411 bits (1546),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 254/306 (84%), Positives = 288/306 (95%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

37) SU5_0279 in NC_017623


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  411 bits (1546),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 254/306 (84%), Positives = 288/306 (95%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

38) CFSAN002069_11085 in NC_021812


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  411 bits (1546),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 254/306 (84%), Positives = 288/306 (95%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

39) SeHA_C4542 in NC_011083


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  411 bits (1546),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 254/306 (84%), Positives = 288/306 (95%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

40) SE451236_04050 in NC_021820


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

41) STM14_5055 in NC_016856


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

42) gtrB in NC_017046


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

43) STMMW_41541 in NC_016854


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

44) STM4205 in NC_003197


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

45) gtrB in NC_016810


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

46) STM474_4397 in NC_016857


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

47) STMDT12_C43380 in NC_016860


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

48) STU288_21110 in NC_021151


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

49) STMUK_4189 in NC_016863


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

50) CFSAN001921_19400 in NC_021814


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+W YIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

51) CFSAN002050_03845 in NC_021818


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  407 bits (1532),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDYATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLD A+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGSSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

52) SNSL254_A4543 in NC_011080


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  407 bits (1532),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDYATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLD A+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGSSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

53) SN31241_5180 in NC_021902


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  407 bits (1532),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 253/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDYATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLD A+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGSSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

54) gtrB in NC_006905


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  407 bits (1531),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 252/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDYATGDVVIPIDVDLQDPIEVIPHLINKWQAGTEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLD A+GD VIPIDVDLQDPIEVIPHLI+KWQAG+EMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

55) SPC_4265 in NC_012125


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  407 bits (1531),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 252/306 (83%), Positives = 287/306 (94%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDYATGDVVIPIDVDLQDPIEVIPHLINKWQAGTEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLD A+GD VIPIDVDLQDPIEVIPHLI+KWQAG+EMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigimgEYIGRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

56) SE451236_08810 in NC_021820


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

57) SEEH1578_12220 in NC_021810


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

58) CFSAN002069_06055 in NC_021812


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

59) SeHA_C0668 in NC_011083


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

60) yfdH in NC_016856


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

61) gtrB in NC_017046


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

62) STMMW_06241 in NC_016854


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

63) yfdH in NC_003197


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

64) gtrB in NC_016810


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

65) yfdH in NC_016857


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

66) STMDT12_C06200 in NC_016860


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

67) STU288_11585 in NC_021151


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

68) yfdH in NC_016863


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

69) CFSAN001921_14245 in NC_021814


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 272/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

70) CFSAN001992_08505 in NC_020307


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1517),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 271/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERIAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAER+AG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

71) yfdH in NC_011294


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1516),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDTVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GD+VIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TD+VEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

72) SSPA2017 in NC_011147


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1516),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVGYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGTWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYG+WMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNGKK  306
            +K+G+K
Sbjct  301  LKKGRK  306

73) gtrB in NC_006511


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1516),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVGYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGTWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYG+WMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNGKK  306
            +K+G+K
Sbjct  301  LKKGRK  306

74) I137_10950 in NC_021984


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1516),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDTVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GD+VIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TD+VEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

75) gtrB in NC_003198


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1516),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVGYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGTWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYG+WMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNGKK  306
            +K+G+K
Sbjct  301  LKKGRK  306

76) STBHUCCB_24400 in NC_016832


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1516),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVGYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGTWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYG+WMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNGKK  306
            +K+G+K
Sbjct  301  LKKGRK  306

77) TY21A_11690 in NC_021176


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1516),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVGYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGTWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYG+WMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNGKK  306
            +K+G+K
Sbjct  301  LKKGRK  306

78) gtrB in NC_004631


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  403 bits (1516),  Expect = 6e-114, Method: Compositional matrix adjust.
 Identities = 270/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR+VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVGYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGTWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYG+WMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNGKK  306
            +K+G+K
Sbjct  301  LKKGRK  306

79) SeSA_A0724 in NC_011094


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  402 bits (1511),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 272/303 (90%), Positives = 292/303 (97%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERIAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAER+AG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKK  303
            LKK
Sbjct  301  LKK  303

80) SeAg_B0603 in NC_011149


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  402 bits (1512),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 271/306 (89%), Positives = 294/306 (97%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

81) yfdH in NC_017531


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  402 bits (1511),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 257/303 (85%), Positives = 289/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLIVPVLNEEDAIPVFYKTVREFEALKQHTIEIVFINDGSKDATESIIDALSVSDPL  60
            MKISL+VPV+NEE+AIPVFYKTVREF+ LK   +EIVFINDGSKDATESII+AL+VSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSLTRNFGKEPALFAGLEHATGDAVIPIDVDLQDPINVIPLLIEKWQAGADIVLAKR  120
            VVPLS+TRNFGKEPALFAGL+HA+GDAVIPIDVDLQDPI+VIP LIEKWQAGA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKTAEWFYTLHNKISNPKIEENVGDFRLMSRDVVENIKKMPERNLFMKGI  180
             DRSTDG+LKRKTAEWFY LHNKIS PKIEENVGDFRLMSR+VVENIK +PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTEVIEYARAERVAGDSKFNSWKLWNLALEGITSFSTFPLRMWTYIGLLVASFA  240
            LSWVGG+T+V+EY RAERVAG SKFN+WKLWNLALEGITSFSTFPLR+WTYIGL+VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIVDKIWFGNSVPGYPSLLVSilflggvqligigvlgEYIGRIYIESKNRPRYI  300
            FLYGAWMI+D + FGN+V GYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+E+K+RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKK  303
            +KK
Sbjct  301  LKK  303

82) yfdH in NC_013956


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  402 bits (1511),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 257/303 (85%), Positives = 289/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLIVPVLNEEDAIPVFYKTVREFEALKQHTIEIVFINDGSKDATESIINALSVSDPL  60
            MKISL+VPV+NEE+AIPVFYKTVREF+ LK   +EIVFINDGSKDATESIINAL+VSDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPLSLTRNFGKEPALFAGLEHATGDAVIPIDVDLQDPINVIPLLIEKWQAGADIVLAKR  120
            VVPLS+TRNFGKEPALFAGL+HA+GDAVIPIDVDLQDPI+VIP LIEKWQAGA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKTAEWFYTLHNKISNPKIEENVGDFRLMSRDVVENIKKMPERNLFMKGI  180
             DRSTDG+LKRKTAEWFY LHNKIS PKIEENVGDFRLMSR+VVENIK +PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTEVIEYARAERIAGDSKFNSWKLWNLALEGITSFSTFPLRMWTYIGLLVASFA  240
            LSWVGG+T+V+EY RAER+AG SKFN+WKLWNLALEGITSFSTFPLR+WTYIGL+VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIVDKIWFGNSVPGYPSLLVSilflggvqligigvlgEYIGRIYIESKNRPRYI  300
            FLYGAWMI+D + FGN+V GYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+E+K+RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKK  303
            +KK
Sbjct  301  LKK  303

83) SBOV42801 in NC_022241


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  402 bits (1511),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 254/306 (84%), Positives = 288/306 (95%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPL  60
            MKISLVVPVFNEE+AIP+FYKTVRE+  LKPY+VEI+F+NDGS DATESII+ALAV+DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKR  120
            VVP+SFTRNFGKEPALFAGLDHA+GD VIPIDVDLQDPIEVIPHLI+KWQAGAEMVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGI  180
             DRSTDG+LKRK+AEWFY+LHNKISTPKIEENVGDFRLMSRE+VENIKLLPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALS  240
            LSWVGGQTDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIG+ V+++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LIYAMWMIIDKLMWGNPVPGYPSLMTAilflggiqligigiigeyigRVYTEVKQRPRYI  300
            ++Y+ WMIID L+ GNPV GYPSL+ +ILFLGG+QLIGIG++GEYIGR+Y E K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKNKKT  306
            +K+ + 
Sbjct  301  LKKGRK  306

84) SU5_01248 in NC_017623


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  400 bits (1506),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 271/306 (89%), Positives = 293/306 (96%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKKGPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK  PKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKNEKK  306
            +K+ +K
Sbjct  301  LKKGRK  306

85) SSPA2225 in NC_011147


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  399 bits (1502),  Expect = 7e-113, Method: Compositional matrix adjust.
 Identities = 270/303 (90%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

86) SPA2386 in NC_006511


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  399 bits (1502),  Expect = 7e-113, Method: Compositional matrix adjust.
 Identities = 270/303 (90%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

87) SPAB_03003 in NC_010102


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  399 bits (1501),  Expect = 8e-113, Method: Compositional matrix adjust.
 Identities = 235/262 (90%), Positives = 252/262 (97%), Gaps = 0/262 (0%)

Query  1    MKVSLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MK+SLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVVEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYP  262
            FLYGAWMIID L+FGN V GYP
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYP  262

88) yfdH in NC_011274


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  399 bits (1500),  Expect = 9e-113, Method: Compositional matrix adjust.
 Identities = 234/262 (90%), Positives = 252/262 (97%), Gaps = 0/262 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDTVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GD+VIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TD+VEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYP  262
            FLYGAWMIID L+FGN V GYP
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYP  262

89) yfdH in NC_022221


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  399 bits (1500),  Expect = 9e-113, Method: Compositional matrix adjust.
 Identities = 234/262 (90%), Positives = 252/262 (97%), Gaps = 0/262 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDTVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GD+VIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TD+VEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYP  262
            FLYGAWMIID L+FGN V GYP
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYP  262

90) yfdH in NC_016831


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  399 bits (1500),  Expect = 9e-113, Method: Compositional matrix adjust.
 Identities = 234/262 (90%), Positives = 252/262 (97%), Gaps = 0/262 (0%)

Query  1    MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE +IP+FYKTVREF+ELKPYEVEIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDTVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GD+VIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSREVVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDIVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TD+VEY RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYP  262
            FLYGAWMIID L+FGN V GYP
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYP  262

91) SeD_A0655 in NC_011205


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  398 bits (1497),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 269/303 (89%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YE+EIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

92) I137_12060 in NC_021984


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  398 bits (1497),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 269/303 (89%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YE+EIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

93) STMDT12_C03860 in NC_016860


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  398 bits (1497),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 269/303 (89%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YE+EIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

94) STU288_12785 in NC_021151


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  398 bits (1497),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 269/303 (89%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YE+EIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGRLKRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

95) SEEH1578_11020 in NC_021810


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  397 bits (1495),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 268/303 (89%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YE+EIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

96) SU5_01018 in NC_017623


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  397 bits (1495),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 268/303 (89%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YE+EIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

97) CFSAN002069_07215 in NC_021812


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  397 bits (1495),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 268/303 (89%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YE+EIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

98) SeHA_C0415 in NC_011083


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  397 bits (1495),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 268/303 (89%), Positives = 290/303 (96%), Gaps = 0/303 (0%)

Query  1    MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPL  60
            MKISLVVPVFNEE++IP+FYKTVREF+ELK YE+EIVFINDGSKDATESIIN +A SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR  120
            V+PLSFTRNFGKEPALFAGLDHA+GDAVIPIDVDLQDPIEVIPHLIEKWQAGA+MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  SDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGV  180
            SDRSTDGR+KRKTAEWFYKLHNKIS PKIEENVGDFRLMSR VVENIK +PERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS  240
            LSWVGG+TDVV Y RAERVAG SKFNGWKLWNLALEGITSFSTFPLR+WTYIGLF+A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGAWMIIDKLIFGNNVPGYPsllvsvlflggvqligigilgeyigriyieTKQRPKYI  300
            FLYGAWMIID L+FGN V GYPSLLVS+LFLGGVQLIGIG+LGEYIGRIY+ETK RPKYI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKR  303
            LK+
Sbjct  301  LKK  303

99) Pat9b_2559 in NC_014837


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  382 bits (1435),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 233/306 (77%), Positives = 280/306 (92%), Gaps = 0/306 (0%)

Query  1    MKISLIVPVLNEEEALPVFYAAIRNFNGFGDDDVEIVFIDDGSSDGTAQILQNIEHSDPL  60
            MKISL+VPV+NEEEA+PVFY ++R+F+ +   +VEIVFI+DGS D+T  I++ +  SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VKHVCFTRNFGKEPALFAGLEAATGDVVIPIDVDLQDPIDIIPQLIEKWRNGADVVLAKR  120
            V  + FTRNFGKEPALFAGL+ A+GD VIPIDVDLQDPI++IP+LIEKW+ GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRSSDSHLKRKSAEWFYHLHNKISKPQIEENVGDFRLMSREVVENIKLLPERNLFMKGV  180
             DRS+D++LKRK+AEWFY LHNKIS P+IEENVGDFRLMSREVVENIKLLPERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKTEVIEYTRAERVAGTTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFVAGLS  240
            LSWVGG+T+V+EY RAERVAG +KFNGWKLWNLALEGITSFSTFPLR+WTYIGLFVA++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FIYGAYMVLDTLIFGNPVRGYPSIFVSilflggiqligigvlgEYIGRIYLETKKRPRYI  300
            F+YGA M++DTL+FGNPVRGYPS++VSILFLGG+QLIGIGVLGEYIGRIYLETK RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKRTQD  306
            +K+ + 
Sbjct  301  LKKGRK  306

100) gtrb1 in NC_014562


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  376 bits (1413),  Expect = 8e-106, Method: Compositional matrix adjust.
 Identities = 233/304 (77%), Positives = 276/304 (91%), Gaps = 0/304 (0%)

Query  1    MKISLVVPVFNEEEVIPLFYDAVRKYEALAEWQVEIVFIDDGSTDATYKLISQLSQRDPL  60
            MKISLVVPVFNEEE IP+FY +VR ++ L   +VEIVFI+DGS DAT  +I+ L+  DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VRSLSFIRNFGKEPALFAGLEAATGDAVIPIDVDLQDPITIIPDMIRKWQAGADVVLARR  120
            V +LSF RNFGKEPALFAGL+ A+GDAVIPIDVDLQDPI +IP++I KWQAGA++VLA+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRRADGHLKRKTAHWFYKLHNSISDPQIEENVGDFRLMSREVVENIKLLPEKNLFMKGI  180
             DR +DG+LKRKTA+WFYKLHN IS P+IEENVGDFRLMSREVVENIKLLPE+NLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGQTDIVEYVRTERIAGRSKFGGWKLWNLALEGLTSFSTVPLRIWSYLGFLVASLA  240
            LSWVGGQTD+VEYVR+ER+AG SKF GWKLWNLALEG+TSFST PLR+W+Y+G++VAS++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGLWMIVDKLLFGNPVPGYPSILVSvlflggvqligigvlgEYIGRIYIETKNRPRYI  300
            FLYG WMI+D L+FGNPV GYPS+LVS+LFLGGVQLIGIGVLGEYIGRIY+ETK+RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LRKS  304
            L+K+
Sbjct  301  LKKG  304

101) SG0299 in NC_007712


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  375 bits (1409),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 229/306 (75%), Positives = 279/306 (92%), Gaps = 0/306 (0%)

Query  1    MKISLVVPVFNEEKSIPIFYKSVREFPELNQYNIEVVFINDGSTDNTESLINVLEISDPM  60
            MKISLVVPVFNEE +IP+FYK+VREF EL+ Y++E+VFINDGS D TES+IN L +SDP+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VKAISFTRNFGKEPALFAGLEHATGDAIISIDVDLQDPLNIIPQMIEKWRAGADVVLAKR  120
            V ++SFTRNFGKEPALFAGL+HA+GDA+I+IDVDLQDP+++IP++IEKW+AGA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRTTDGKLKRKTAEWFYRLHNKISTQKIEEHVGDFRLISREVVENITCLPERNLFMKGL  180
             DR+TDG+LKRKTAEWFY+LHNKIST KIEE+VGDFRL+SREVVENI  LPERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWMSGKVEMVTYTRAERSAGSSKFSWWKLWNLALEGITSFSTIPLRMWTYIGFGVASLS  240
            LSW++G+ ++V Y RAER AG SKF+ WKLWNLALEGITSFST+PLR+WTYIG+ VAS+S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGLWMTVDKLLFGNPVPGYPSLMVAilfiggvqligigvlgEYIERIYIETKNRPRYV  300
            FLYG WM +D L+FGNPV GYPSL+V+ILF+GGVQLIGIGVLGEYI RIY+ETK+RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IAKKRH  306
            + K R 
Sbjct  301  LKKGRK  306

102) Dd703_0125 in NC_012880


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  372 bits (1399),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 215/302 (72%), Positives = 265/302 (88%), Gaps = 0/302 (0%)

Query  1    MKISLVVPVYNEEDTIEIFYHAVREADFLEKIDVEIIFINDGSIDKTERIVNRIAQNDRL  60
            MKISLVVPV+NEE++I +FY +VRE + L   +VEI+FINDGS D TE I+N +A +D L
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VTAINFTRNFGKEPAIFAGLEYATGDAVIPIDVDLQDPLEVIPLLIEKWRDGADVVLAKR  120
            V +++FTRNFGKEPA+FAGL+ A+GDAVIPIDVDLQDP+EVIP LIEKW+ GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  ADRQTDSFFKRKSAEVFYKIHNKISHPKIEENVGDFRLMSRDTIEHIKILPEKNLFMKGI  180
            +DR TD+ +KRK+AE FYK+HNKIS PKIEENVGDFRLMSR+ +E+IK+LPE+NLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWIGGNVDIVEYTRHERSAGKSKFNAWKLWNLALEGITSFSTVPLRLWTYIGLGIATMS  240
            LSW+GG+ D+VEY R ER AG SKFN+WKLWNLALEGITSFST PLR+WTYIGL +A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  IAYAIWMVIDKLIWGNPVPGYPSIMTAILFLGGVQLIGIGTLGEYIGRIYIESKQRPRYI  300
            + Y+ WM+ID L+ GNPV GYPS++ +ILFLGGVQLIGIG LGEYIGRIY+E+K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VK  302
            +K
Sbjct  301  LK  302

103) gtrb3 in NC_014562


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  369 bits (1388),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 235/303 (78%), Positives = 275/303 (91%), Gaps = 2/303 (0%)

Query  1    MKISLVVPVFNEEDAIRYFYSDVR-YKEFLKPYEIEIVFVDDGSTDFTAQLMKDMQQNDP  59
            MKISLVVPVFNEE+AI  FY  VR ++E LKPYE+EIVF++DGS D T  +++ +  +DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQE-LKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   LVRNVFFTRNFGKEAALFAGIECATGDAIIPIDVDLQDPLEVIPQLIERWQSGADMVLAK  119
            LV  + FTRNFGKE+ALFAG++ A+GDA+IPIDVDLQDP+EVIP+LIE+WQ+GA+MVLAK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RIDRSSDGHMKRKTAEWFYRLHNKISSPMIEENVGDFRLMSRDVVENIKLLPERNLFMKG  179
            R DRS+DG++KRKTAEWFY+LHNKIS+P IEENVGDFRLMSR+VVENIKLLPERNLFMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  180  ILSWVGGKTEIVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGFFVAGL  239
            ILSWVGG+T++VEY RAERVAG +KFNGWKLWNLALEGITSFSTFPLR+WTYIG+FVA++
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  240  SFLYGIWMMIDKIFWGNPVAGYPSLLVSilflggvqligigvlgEYIGRIYIETKKRPRY  299
            SFLYG WM+ID +  GNPV GYPSLLVSILFLGGVQLIGIGVLGEYIGRIY+ETK RP+Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  300  IAK  302
            I K
Sbjct  300  ILK  302

104) EAM_0959 in NC_013971


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  366 bits (1376),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 227/302 (76%), Positives = 276/302 (92%), Gaps = 2/302 (0%)

Query  1    MKISLVVPVFNEEDTINIFYNAVR--QHLNDYEIEIVFINDGSHDNTESIIKKLADSDRL  58
            MKISLVVPVFNEE++I +FY++VR  Q+L+ YE+EIVFINDGS D TESII+ LA SD L
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   VKAISFSRNFGKEPALFAGLENATGDAVIPIDVDLQDPIEVIPQLITKWLSGADVVLAKR  118
            V ++SF+RNFGKEPALFAGL++A+GDAVIPIDVDLQDPIEVIP+LI KW +GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  119  ADRSTDSRFKRKTAEWFYKIHNKISSPKIEENVGDFRLLSRATVDIIRQLPERNLFMKGI  178
            +DRSTD+R+KRKTAEWFYK+HNKIS+PKIEENVGDFRL+SR  V+ I+ LPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  179  LSWVGGRVEIVEYTRAERIAGSSKFIGWKLWNLAVEGITSFSTLPLRIWTYLGLIVASVS  238
            LSWVGG+ ++VEY RAER+AG SKF GWKLWNLA+EGITSFST+PLR+WTY+GL+VAS+S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  239  FVYAIFMIVDKLLFGNPVPGYPSIMTAilflggiqligigvlgEYVGRIYVETKQRPRYI  298
            F+Y+  MI+D L+FGNPV GYPS++ +ILFLGG+QLIGIGVLGEY+GRIY+ETK RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  299  IK  300
            +K
Sbjct  301  LK  302

105) gtrB1 in NC_013961


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  366 bits (1376),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 227/302 (76%), Positives = 276/302 (92%), Gaps = 2/302 (0%)

Query  1    MKISLVVPVFNEEDTINIFYNAVR--QHLNDYEIEIVFINDGSHDNTESIIKKLADSDRL  58
            MKISLVVPVFNEE++I +FY++VR  Q+L+ YE+EIVFINDGS D TESII+ LA SD L
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   VKAISFSRNFGKEPALFAGLENATGDAVIPIDVDLQDPIEVIPQLITKWLSGADVVLAKR  118
            V ++SF+RNFGKEPALFAGL++A+GDAVIPIDVDLQDPIEVIP+LI KW +GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  119  ADRSTDSRFKRKTAEWFYKIHNKISSPKIEENVGDFRLLSRATVDIIRQLPERNLFMKGI  178
            +DRSTD+R+KRKTAEWFYK+HNKIS+PKIEENVGDFRL+SR  V+ I+ LPERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  179  LSWVGGRVEIVEYTRAERIAGSSKFIGWKLWNLAVEGITSFSTLPLRIWTYLGLIVASVS  238
            LSWVGG+ ++VEY RAER+AG SKF GWKLWNLA+EGITSFST+PLR+WTY+GL+VAS+S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  239  FVYAIFMIVDKLLFGNPVPGYPSIMTAilflggiqligigvlgEYVGRIYVETKQRPRYI  298
            F+Y+  MI+D L+FGNPV GYPS++ +ILFLGG+QLIGIGVLGEY+GRIY+ETK RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  299  IK  300
            +K
Sbjct  301  LK  302

106) wcaA in NC_006300


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  360 bits (1351),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 222/305 (73%), Positives = 267/305 (88%), Gaps = 0/305 (0%)

Query  1    MKVSLAVPVFNEEDTIPLFYQKVRNYEELQAYDVEIVFINDGSSDKTEEIITALSAQDPL  60
            MK+SL VPVFNEE++IP+FY+ VR+++EL++Y+VEIVFINDGS D TE II AL+  DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VQAVQFSRNFGKEPALFAGLEYSTGDVVIPIDVDLQDPIEVIPELIKEHQKGFDVVLAKR  120
            V ++ F+RNFGKEPALFAGL+ ++GD VIPIDVDLQDPIEVIP+LI   Q G ++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  VDRQTDSWFKRKTALWFYKLHNQISKPKIEENVGDFRLMSRRVVEAIKQLPERQLFMKGI  180
             DR TD+++KRKTA WFYKLHN+IS PKIEENVGDFRLMSR VVE IK LPER+LFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGFDTAVVEYNRAERVAGTTKFNGWKLWNFALEGITSFSTFPLRLWTYIGLFISACS  240
            LSWVG +T VVEY RAERVAG +KFNGWKLWN+ALEGITSFSTFPLR+WTYIGLF+++ S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGSILILGKLIWGNTVPGYPSLMVAILFlggvqligvgvlgEYIGRIYSESKQRPRYI  300
            FLYG+ +I++ L+ GN V GYPSL+V+ILFLGGVQLIG+GVLGEYIGRIY E+K RP+YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKTQK  305
            +K  +
Sbjct  301  LKKGR  305

107) yfdH in NC_007204


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  349 bits (1309),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 225/303 (75%), Positives = 275/303 (91%), Gaps = 0/303 (0%)

Query  1    MKVSLVVPVFNEEEAIPLFYDSVRSYPDFQKYDIEIIFINDGSTDDTEIIINNLMASDPL  60
            MK+SLVVPVFNEEEAIP+FY +VR + +++ Y++EI+FINDGS D TE IIN L  SDPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VTSLSFTRNFGKEPALIAGIEHATGDAVIPMDVDLQDPIEVIPKLIEKWLVGADIVLAKR  120
            V +LSFTRNFGKEPAL+AG++HA+GDAVIP+DVDLQDPIEVIP LIEKW  GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  VDRSSDSFLKRSTSSSFYKLHNKISNPKIEDNVGDFRLMSRDVIENIKSMPERNLFMKGI  180
             DRS+D+ LKR T+  FYKLHNKIS PKIE+NVGDFRLMSR+V+ENIK +PERNLFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGGKVDIVEYKRPVRIAGITKFNSWKLWNLALEGVTSFSTVPLKIWTYLGILIASLS  240
            LSWVGG+ D+VEY R+ R+AGI+KFN+WKLWNLALEG+TSFST PL++WTY+G+++AS+S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FFYGSWMIINTLLWGSAVAGYPSLLVSilflggiqligigilgeyigriyiETKQRPRYV  300
            F+YG+WMII+TL+ G++V GYPSLLVSILFLGG+QLIGIG+LGEYIGRIY+ETK RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  LKK  303
            LKK
Sbjct  301  LKK  303

108) ambt_10495 in NC_015554


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  349 bits (1309),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 214/304 (71%), Positives = 262/304 (87%), Gaps = 2/304 (0%)

Query  3    KITLVVPVLNEQEVIEIFYNKVKA--ELSQYQTEIVFVDDGSTDSTLSIIEKLASEDALV  60
            KI+LVVPV+NE+E I +FY+ V+   EL  Y+ EIVF++DGS D+T SII+ LA  D+LV
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  61   VPLSLSRNFGKEAALFAGLEHATGDAIIPIDVDLQDPIEVVHELIEKWKEGFEVVLAKRV  120
            VPLS++RNFGKE+ALFAGL+HA+GDA+IPIDVDLQDPIEV+ +LIEKW+ G E+VLAKR 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  121  SRNSDTYLKKKTAQWFYSLHNKISYTKIEENVGDFRLMDKSIVENIIMLDERNLFMKAVL  180
             R++D  LK+KTA+WFY LHNKIS  KIEENVGDFRLM + +VENI +L ERNLFMK++L
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  181  SWVGGNTAIVTYSREERAAGETKFNGWKLWNLALEGITSFSTVPLRVWTYVGLFIAFMSF  240
            SWVGG+T +V Y R ER AG +KFNGWKLWNLALEGITSFST PLRVWTY+GLF+A +SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  241  LYGGFMIIDKLIWGNEVQGYPSLIVSVLFlggiqligigvlgEYIGRIYVETKRRPRYLL  300
            LYG+ MIID L+ GN V+GYPSL+VS+LFLGG+QLIGIGVLGEYIGRIY+ETK RP+Y+L
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  301  RNKR  304
            ++ R
Sbjct  302  KKGR  305

109) ETAC_08880 in NC_020796


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  324 bits (1217),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 205/308 (67%), Positives = 262/308 (86%), Gaps = 2/308 (0%)

Query  1    MKISLVVPVFNEESAIPLFHDAVRQCDDLAPYRIEIVFVNDGSSDRTEEVISGIIDDDPL  60
            MKISLVVPVFNEE AIP+F  +VR+ ++L PY +EIVF+NDGS D TE +I+++   DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIMVNFSRNFGKEAALFAGLKYATGEAIIPIDVDLQDPIELIPQLIARWRNGADVVLAKR  120
            V+ ++F+RNFGKE+ALFAGL  A+G+A+IPIDVDLQDPIE+IP+LI +W+ GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRTSDTLMKRLTASLFYRVHNQIANPKIEMNVGDYRLMSRQVVDAVLMLHERNLFMKGL  180
             DR++D  +KR TA  FY++HN+I+ PKIE NVGD+RLMSR+VV+ + +L ERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGFKTAVVTYARHERVAGSSKFNFWKLWNLALEGITSFSTIPLRLWTYIGTSIAAFS  240
            LSWVG +T VV Y R ERVAG SKFN WKLWNLALEGITSFST+PLR+WTYIG  +A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LFYALYVIIKTLIFDNPVPGYPSIMAVilflggiqligigvlgEYIGRIYVETKQRPRFI  300
            ++Y+  +II TL+F+NPV GYPS++  ILFLGG+QLIGIGVLGEYIGRIY+ETK RP++I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKELKGRK  308
            +K  KGRK
Sbjct  301  LK--KGRK  306

110) yfdH in NC_013508


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  324 bits (1217),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 205/308 (67%), Positives = 262/308 (86%), Gaps = 2/308 (0%)

Query  1    MKISLVVPVFNEESAIPLFHDAVRQCDDLAPYRIEIVFVNDGSSDRTEEVISGIIDDDPL  60
            MKISLVVPVFNEE AIP+F  +VR+ ++L PY +EIVF+NDGS D TE +I+++   DPL
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VIMVNFSRNFGKEAALFAGLKYATGEAIIPIDVDLQDPIELIPQLIARWRNGADVVLAKR  120
            V+ ++F+RNFGKE+ALFAGL  A+G+A+IPIDVDLQDPIE+IP+LI +W+ GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  IDRTSDTLMKRLTASLFYRVHNQIANPKIEMNVGDYRLMSRQVVDAVLMLHERNLFMKGL  180
             DR++D  +KR TA  FY++HN+I+ PKIE NVGD+RLMSR+VV+ + +L ERNLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGFKTAVVTYARHERVAGSSKFNFWKLWNLALEGITSFSTIPLRLWTYIGTSIAAFS  240
            LSWVG +T VV Y R ERVAG SKFN WKLWNLALEGITSFST+PLR+WTYIG  +A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  LFYALYVIIKTLIFDNPVPGYPSIMAVilflggiqligigvlgEYIGRIYVETKQRPRFI  300
            ++Y+  +II TL+F+NPV GYPS++  ILFLGG+QLIGIGVLGEYIGRIY+ETK RP++I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKELKGRK  308
            +K  KGRK
Sbjct  301  LK--KGRK  306

111) M636_20860 in NC_021848


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  303 bits (1134),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 178/301 (60%), Positives = 234/301 (78%), Gaps = 0/301 (0%)

Query  1    MLISLVVPVFNEQETIETFYHAARNDCFLKTKNVEIIFVNDGSADKTAQLIEELVAQDTN  60
            M ISLVVPVFNE+E+I  FY + R+   LK  +VEI+F+NDGS D T  +I+ L   D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VRLINFSRNFGKEPALFCGLVHSRGDIVIPMDVDLQDPIELIETMYHKWEAGAKMVLAKR  120
            V  ++F+RNFGKEPALF GL H+ GD VIP+DVDLQDPIE+I  + +KW+AGA MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  GDRSRDHWLKRVTANYFYKVHNALSHSKIEENVGDFRLMDRCIVDIITSLQEKNLFMKGL  180
            +DRS D +LKR TA+ FYK+HN +S +KIEENVGDFRLM R +V+ I  L E+NLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWPGFDPVIVEYKRPERSAGTTKFNTFKLLNLAIEGITNFSTSPLKLASYVGFGISFLS  240
            LSW G +  +VEY R+ER AG +KFN  KL NLA+EGIT+FST PL++ +Y+G+ ++ +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGISIIIQKLLFSLDVPGYASLITVMVFLGGVQLITIGILGEYVGRIYTEVKARPQYV  300
            FLYG  +II+ L+F+  V GY+SL+  ++FLGGVQLI IG+LGEY+GRIY E K+RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  I  301
            +
Sbjct  301  L  301

112) M634_02900 in NC_021847


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  303 bits (1134),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 178/301 (60%), Positives = 234/301 (78%), Gaps = 0/301 (0%)

Query  1    MLISLVVPVFNEQETIETFYHAARNDCFLKTKNVEIIFVNDGSADKTAQLIEELVAQDTN  60
            M ISLVVPVFNE+E+I  FY + R+   LK  +VEI+F+NDGS D T  +I+ L   D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VRLINFSRNFGKEPALFCGLVHSRGDIVIPMDVDLQDPIELIETMYHKWEAGAKMVLAKR  120
            V  ++F+RNFGKEPALF GL H+ GD VIP+DVDLQDPIE+I  + +KW+AGA MVLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  GDRSRDHWLKRVTANYFYKVHNALSHSKIEENVGDFRLMDRCIVDIITSLQEKNLFMKGL  180
            +DRS D +LKR TA+ FYK+HN +S +KIEENVGDFRLM R +V+ I  L E+NLFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWPGFDPVIVEYKRPERSAGTTKFNTFKLLNLAIEGITNFSTSPLKLASYVGFGISFLS  240
            LSW G +  +VEY R+ER AG +KFN  KL NLA+EGIT+FST PL++ +Y+G+ ++ +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYGISIIIQKLLFSLDVPGYASLITVMVFLGGVQLITIGILGEYVGRIYTEVKARPQYV  300
            FLYG  +II+ L+F+  V GY+SL+  ++FLGGVQLI IG+LGEY+GRIY E K+RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  I  301
            +
Sbjct  301  L  301

113) PputW619_0863 in NC_010501


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  281 bits (1053),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 155/270 (58%), Positives = 220/270 (82%), Gaps = 0/270 (0%)

Query  1    MNITLVVPLYNEQDTLERFYHTVRNEPSLQGLAVEILLVNDGSNDASEAICAELAARDEW  60
            M+I+LVVP++NE++++  FY TVR+   L+   VEI+++NDGS+DA+E+I   LA  D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VTVVNFSRNFGKESALFAGLEYADGDAVVPIDVDLQDPVELIAQMIDVWQQGAEVVLAKR  120
            V  ++F+RNFGKE+ALFAGL+ A GDAV+PIDVDLQDP+E+I+++I+ WQ GAE+VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  RSRAADTRFKRWSARLYYRLHNRIASTRIEENVGDFRLLDRKVVAAIRQLPEQQLFMKGV  180
              R++D R+KR +A  +Y+LHN+I++ +IEENVGDFRL+ R VV  I+ LPE++LFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWVGFRTEIVEYDRPERTAGNSKFSFWRLWNLALDGITSFSTVPLRLWSYVGGGVSLSA  240
            LSWVG +T++VEY R+ER AG SKF+ W+LWNLAL+GITSFST PLR+W+Y+G  V+  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FVFAMYMVIDKILFGNDVPGYPSLMTAVLF  270
            F+++  M+ID ++FGN V GYPSL+ ++LF
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILF  270

114) PputUW4_01006 in NC_019670


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  280 bits (1048),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 195/303 (65%), Positives = 246/303 (82%), Gaps = 0/303 (0%)

Query  1    MKISLIVPVFNEEQSINLFYQAVRRELKLGDTEVEIVFINDGSSDRTAEQATALAEADEQ  60
            MKISL+VPVFNEE++I +FY++VR    L   EVEIVFINDGS D T     ALA +D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VLLINFSRNFGKEPALFAGLEHASGDAVIPMDVDLQDPISVIPLLVEQWQKGADVVLAKR  120
            V+ ++F+RNFGKEPALFAGL+HASGDAVIP+DVDLQDPI VIP L+E+WQ GA++VLAKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  RNRDVDGYLRRHSASIFYHVLNRIAYTRIEENVGDFRLMDRKVVDVIRSLPEHQLFMKGV  180
             +R  DG L+R +A  FY + N+I+  +IEENVGDFRLM R VV+ I+ LPE++LFMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  LSWAGFNSVVVEYERAGRVAGNSKFNGWKLWNLALEGVTSFSTVPLRLWTYVGGGISIFA  240
            LSW G ++ VVEY RA RVAG SKFNGWKLWNLALEG+TSFST PLR+WTY+G  ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  VFYAVYMVLDKIFFGNNVPGYPSLMTAilflggvqligigilgeyigriyieAKHRPRYV  300
             +Y+  M++D + FGN V GYPSL+ +ILFLGGVQLIGIG+LGEYIGRIY+E+K RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IKD  303
            +K 
Sbjct  301  LKK  303

115) HRM2_29910 in NC_012108


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  278 bits (1042),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 177/302 (59%), Positives = 227/302 (76%), Gaps = 0/302 (0%)

Query  8    LSVVCPFFNEEEVVDFFMEKIHQVLNTLDLTYEIVCVNDGSLDRTLEKLILAKKSYPNLR  67
            +S+V P FNEEE +  F   +++  +      EIV +NDGS D T   +     S P + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  68   ILDFSRNFGKEAALTAGLDHARGKVIVPIDADLQDPPELIIDFIEKWREGYEVVVGKRVD  127
             L F+RNFGKE+AL AGLDHA G  ++PID DLQDP E+I ++IEKW+ G E+V++KR D
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  128  RSTDGLLKRMTAQLYYRFHNKISNQKIPENVGDFRLITRRVVEAIQQMPENQRFMKGIFA  187
            RSTDG LKR TA+ +Y++HNKIS  KI ENVGDFRL++R VVE I+ +PE + FMKGI++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  188  WVGFNTCVVAYKRQKRRAGKTSFHGWGLWNFALDGITSFSTVPLRVWLYIGSLIALISLV  247
            WVG +T VV Y R  R AG + F+GW LWN+AL+GITSFST PLRVW YIG ++A IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  248  YGSYIILRTLVFGVDLPGYASLLVSILFLGGVQLMGIGVLGEYLGRIYLETKHRPQYIVD  307
            YG+ +I+ TLVFG  + GY+SLLVSILFLGGVQL+GIGVLGEY+GRIYLETK RP+YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  308  KE  309
            K 
Sbjct  303  KG  304

116) Entcl_1659 in NC_014618


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  277 bits (1036),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 179/303 (60%), Positives = 245/303 (81%), Gaps = 1/303 (0%)

Query  3    KTSLIVPVFNEEDAIPLFYQAIRSDEFLSKMNIEIMFVNDGSTDATEDIARQIISNDNRI  62
            K SL+VPVFNEE+AIP+FY+++R  + L   ++EI+F+NDGS DATE I   +  +D  +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   VLVNLSRNFGKEKALFAGLCTVDADFIVPIDVDLQDPIELIEVMFDMLLDGSFDIILAKR  122
            V ++++RNFGKE ALFAGL    +D ++PIDVDLQDPIE+I  +++    G+ +++LAKR
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKR  120

Query  123  SDRSSDSFLKRKTAELFYKTHNKLSDVKLEANVGDFRIMRKQVVQSITKMSESQLFMKGI  182
            SDRS+D+ LKRKTAE FYK HNK+S  K+E NVGDFR+M ++VV++I  ++E +LFMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  183  FSWVGFRAGIVEYKRCSRVAGNSKFNSWKLWNLAVEGITSFSIAPLKVWIYLGAAISLFS  242
            +SWVG ++++VEY R  RVAG SKFN+WKLWNLA+EGITSFS  PL+VW Y+G  ++ +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  243  FLYAANLIISKLFFGNPVAGYPSIMVAilflggiqligigvlgEYLGRCYMESKQRPKFI  302
            FLY+A +II  L FGNPV GYPS++V+ILFLGG+QLIGIGVLGEY+GR Y+E+K RPK+I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  303  IRN  305
            +++
Sbjct  301  LKK  303

117) L483_06440 in NC_021491


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  273 bits (1022),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 165/308 (54%), Positives = 233/308 (76%), Gaps = 4/308 (1%)

Query  8    TISLVSPFYNEEKGVHAFFQRINEVFASLADRYELEVIAVNDGSRDHTYDQLVKAKADYA  67
             ISLV P +NEE ++  F++ + E F  L   YE+E++ +NDGS+D T + +++A A   
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQEL-KPYEVEIVFINDGSKDAT-ESIINALAVSD  58

Query  68   YLTV-VDLSRNFGKEAAISAGLDFATGDAIVPIDSDLQHPPEVILELVEKWEQGAEVVLA  126
             L V + ++RNFGKE+A+ AGLD A+GDA++PID DLQ+P EVI +L+EKW+ GAE+VLA
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  127  KRVDRETDRPIQKFTANYFYKVHNRISDIDIPADVGDFRLMDRKVVDALKTLPESRRFMK  186
            KR DR TD  +++ TA+ FYK+HN+IS   I  +VGDFRLM R VV+ +K LPE   FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  187  GLFAWVGFRTTTVEYKVAAREHGSSSFNTWKLWNFAIEGITSFSSVPLRIWTYLGCLVSA  246
            G+++WVG +T  VEY  A R  G S FN WKLWN+A+EGITSFS+ PLR+WTY+G +V++
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  247  VSFVYAAYLLIKTLFFGVDLPGYASIMITVLFASGVQLIGIGVLGEYVGRIFTESKNRPV  306
            +SF+Y+A ++I TL FG  + GY+S+++++LF +GVQLIGIGVLGEY+GRI+ E+K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  307  YIVRDVIK  314
            YI++   K
Sbjct  299  YILKKGRK  306

118) TERTU_0854 in NC_012997


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  273 bits (1022),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 154/300 (52%), Positives = 226/300 (76%), Gaps = 0/300 (0%)

Query  10   KLSLLVPMYNESSVIPIFFETVFNVLENIAYDVEFVCVNDGSRDNTLELLKEYSAKDSRI  69
            K+SL+VP++NE   IP+F+ TV +  E  +Y+VE+V +NDGS+D T  +++  +  D+ +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   KIVSFSRNFGKEPAMTAALDFATGDALIPIDADLQDPPELIHEMIAKWEEGYDVVYAKRS  129
              +SF+RNFGKEPA+ A+LD A+GDA+IPID DLQDP E+I ++I KW+ G ++V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRETDGVLKRNTARWFYSLFNRMSDTDIPANVGDYRLMDRKVVDVIRQLPEKDRFMKGLF  189
             R TDG LKR+TA WFY L N++S   I  NVGD+RLM R VV+ I+ LPE++ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  CWPGFKDTTVEFKRPLRAEGETKFNMWKLWNFAISGIASFSTMPIRVGIYLGLLISAASF  249
             W G +   VE+ R+ R  G +KFN WKLWN+A+ GI+SFST P+RV  Y+GL++++ SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  IYALFIVSKTILFGVDVPGYASIMVVVLFLGGIQMFFLGLMGEYIGRIYKEVKNRPLYVV  309
            +Y+  ++  T++FG  V GY+S++V +LFLGG+Q++ +G++GEYIGRIY E K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

119) Ddes_2219 in NC_011883


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  266 bits (996),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 159/304 (53%), Positives = 240/304 (79%), Gaps = 1/304 (0%)

Query  14   ISLSLVVPVYNEADVIDIFVNKINEVFKTRTDIDLEMVFVDDGSTDGTAAVLECLCHDDP  73
            + +SLVVPV+NE + I +F + + E F+     ++E+VF++DGS D+T ++++ L   DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  74   RVRVLELSRNFGKEAALTAGLDFAAGQAVVPMDVDLQDPPELILDMVEKWQEGFDVVLGR  133
             V  L ++RNFGKE+AL AGLD A+G+AV+P+DVDLQDP E+I +++EKWQ G ++VL++
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  134  RANRSSDTWAKRTSAYLFYSLHNKIAKPKLPVNVGDFRLMDRRVVEALRLLPESRRFMKG  193
            R++RS+D + KR +A  FY LHNKI+ PK+  NVGDFRLM R VVE ++LLPE   FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  194  LFAWLGFRTCNLDYVRPARAAGQTKFNSWRLWNFALEGLTSFSTAPLRIWTYVGMAISAL  253
            +++W+G +T  ++YVR+ R AG +KFN+W+LWN+ALEG+TSFST PLR+WTY+G+ ++++
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  254  SFIYATIIALKVILGGVDVPGYASLMVAITFlgglqligigmigEYLGRAYMESKRRPVY  313
            SF+Y++ + +  ++ G  V GY+SL+V+I FLGG+QLIGIG++GEY+GR Y+E+K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  314  IVRR  317
            I+++
Sbjct  300  ILKK  303

120) Thicy_1418 in NC_015581


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  264 bits (988),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 168/305 (56%), Positives = 227/305 (75%), Gaps = 1/305 (0%)

Query  30   VDLSIVVPCFNEEAVIPVFLTTLIPILQSLELTYELVFINDGSRDKTLDVLLEQKQTYPE  89
            + +S+VVP FNEE  IPVF  T+  + +      E+VFINDGS+D T  ++     + P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  90   IRIINFSRNFGKEAALSAGIDFAQGKALIPIDVDLQDPPELIREMVRIWQEKNVDVVLAK  149
            +  ++F+RNFGKE+AL AG+D A G A+IPIDVDLQDP E+I +++  WQ    ++VLAK
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQA-GAEMVLAK  119

Query  150  RVDRSKDSFFKRWSANVFYRLNNLISDNRIPENVGDFRLVSRRCVEAIKMMGETQRFMKG  209
            R DRS D+ +KR +A+ FY+L+N IS  +I ENVGDFRL+SR  VE IK++ E + FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  210  VFAWVGFKTQVIEYQRDERQAGKTSFNAWKLWNLALEGITSFSTAPLRVWLYLGLVAWLL  269
            +++WVG +T+V+EY R ER AG + FN+WKLWNLALEGITSFST PLRVW Y+GL    +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  270  SITYGFWIILRTLIFGVDIPGYASMFTAILFLGSTQLIVLGVLGEYIGRIYLESKGRPLY  329
            S+ YG W+I+ TL+FG  + GY+S++ +ILFLG+ QLI +GVLGEYIGRIYLE+K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  330  IVEKE  334
            I+ K 
Sbjct  300  ILKKG  304

121) Bcen_4342 in NC_008061


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  263 bits (983),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 235/302 (78%), Gaps = 1/302 (0%)

Query  10   VSLVVPFHDEAEAIDAFFATTVPILEAIGTARFEIVCVNDGSRDGTLDKLIDIAVADPRV  69
            +SLVVP  +E EAI  F+  TV  ++ +     EIV +NDGS+D+T   +  +AV+DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RIVDLTRRFGKEAALTAGIDEAAGAAVILIDADLQDPPALIPAMLERWHAGAEVVAAKRT  129
              + +TR FGKE+AL AG+D+A+G AVI ID DLQDP  +IP ++E+W+AGAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  DRRCDPLMQRVAAALYYRVHNQLSEVEMPENVGDFRLMDRQVVDALRALPERRRFMKGLF  189
            DR  D  ++R +A  +Y++HN++S   + ENVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTEIIEYTRAARSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYIGLAFAVLSF  249
            +WVG +T+++EY RA R +G SKF+GW+ WN+ALEGITSFST PLRVWTYIGL  A +SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAYIVMRTLLFGNPVHGYASLISVMLFvggiqligigvigEYLGRIYHESKQRPVYLV  309
            +YGA +++ TL+FGNPV+GY+SL+  +LF+GG+QLIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

122) Bcen2424_4024 in NC_008543


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  263 bits (983),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 235/302 (78%), Gaps = 1/302 (0%)

Query  10   VSLVVPFHDEAEAIDAFFATTVPILEAIGTARFEIVCVNDGSRDGTLDKLIDIAVADPRV  69
            +SLVVP  +E EAI  F+  TV  ++ +     EIV +NDGS+D+T   +  +AV+DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RIVDLTRRFGKEAALTAGIDEAAGAAVILIDADLQDPPALIPAMLERWHAGAEVVAAKRT  129
              + +TR FGKE+AL AG+D+A+G AVI ID DLQDP  +IP ++E+W+AGAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  DRRCDPLMQRVAAALYYRVHNQLSEVEMPENVGDFRLMDRQVVDALRALPERRRFMKGLF  189
            DR  D  ++R +A  +Y++HN++S   + ENVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTEIIEYTRAARSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYIGLAFAVLSF  249
            +WVG +T+++EY RA R +G SKF+GW+ WN+ALEGITSFST PLRVWTYIGL  A +SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAYIVMRTLLFGNPVHGYASLISVMLFvggiqligigvigEYLGRIYHESKQRPVYLV  309
            +YGA +++ TL+FGNPV+GY+SL+  +LF+GG+QLIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

123) BCAM1128 in NC_011001


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  261 bits (976),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 166/302 (55%), Positives = 235/302 (78%), Gaps = 1/302 (0%)

Query  10   VSLVVPFHDEAEAIDAFFATTVPILEAIGTARFEIVCVNDGSRDGTLDKLIDIAVADSRV  69
            +SLVVP  +E EAI  F+  TV  ++ +     EIV +NDGS+D+T   +  +AV+D+ V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RIVDLTRRFGKEAALTAGIDEAAGAAVILIDADLQDPPALIPAMLERWHAGAEVVAAKRT  129
              + +TR FGKE+AL AG+D+A+G AVI ID DLQDP  +IP ++E+W+AGAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  DRRCDPLMQRVAAALYYRVHNQLSEVEMPENVGDFRLMDRQVVDALRALPERRRFMKGLF  189
            DR  D  ++R +A  +Y++HN++S   + ENVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTEIIEYTRAARSGGHSKFSGWRRWNFALEGITSFSTVPLRVWTYIGLAFAVLSF  249
            +WVG +T+++EY RA R +G SKF+GW+ WN+ALEGITSFST PLRVWTYIGL  A +SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAYIVMRTLLFGNPVHGYASLISVMLFvggiqligigvigEYLGRIYHESKQRPVYLV  309
            +YGA +++ TL+FGNPV+GY+SL+  +LF+GG+QLIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

124) Bcep18194_B2047 in NC_007511


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  261 bits (975),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 236/302 (79%), Gaps = 1/302 (0%)

Query  10   VSLVVPFHDEDEAIDAFFATTLPILESVESVRFEIVCINDGSRDDTLGRLIDVAAGDPRV  69
            +SLVVP  +E+EAI  F+  T+  ++ + +   EIV INDGS+D T + +  +A +DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RIVDLTRRFGKEAALTAGLDEAAGTAVILIDADLQDPPALIPAMIERWLAGAEVVAAKRT  129
              + +TR FGKE+AL AGLD+A+G AVI ID DLQDP  +IP +IE+W AGAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  DRMCDPLMQRVAAALYYRVHNRLSEVEMPENVGDFRLMDRQVVDALRALPERRRFMKGLF  189
            DR  D  ++R +A  +Y++HN++S   + ENVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTEIIEYTRAPRSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYIGLAFAALSF  249
            +WVG +T+++EY RA R +G SKF+GW+ WN+ALEGITSFST PLRVWTYIGL  A++SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGTFIVLRTLLFGNPVHGYASLISVMLFvggiqligigvigEYLGRIYHESKQRPVYLV  309
            +YG+ +++ TL+FGNPV+GY+SL+  +LF+GG+QLIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

125) Bphy_1685 in NC_010622


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 174/302 (58%), Positives = 238/302 (79%), Gaps = 1/302 (0%)

Query  49   LSLVVPFYNEEEMIGAFFSTVIPVLEAIDGVQFEIVCVNDGSRDGTLRMLISMSDQDSRI  108
            +SLVVP +NEEE I  F+ TV   ++ +   + EIV +NDGS+D+T  ++ +++  D+ +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  109  RVIDLSRNFGKEAALSAGLDEARGAIVIPFDADLQDPPRVIPLLVEKWREGYDVVVAKRV  168
              + ++RNFGKE+AL AGLD+A G  VIP+D DLQDP  VIP L+EKW+ G ++V+AKR 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  169  DRLTDSFLKRQTAGIFYQIHNSVCDTKIPENVGDFRLITREVVDALKRLPETRRFMKGLF  228
            DR TD+ LKR+TA  FY++HN +   KI ENVGDFRL++REVV+ +K LPE   FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  229  AWVGYQTAVVEYVREPRLAGRSKFSGWKLWNFALEGFTSFSTLPLRVWTYVGSFVALGAF  288
            +WVG QT VVEYVR  R+AG SKF+GWKLWN+ALEG+TSFST+PLRVWTY+G FVA  +F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  289  LYASFLIVRTLIQGVAVPGYASLISTvlllggvqligigvlgEYIGRIYYESKNRPVYLI  348
            LY++ +I+ TL+ G +V GY+SL+ ++L+LGGVQLIGIGVLGEYIGRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  349  RR  350
            ++
Sbjct  302  KK  303

126) Bcenmc03_3500 in NC_010515


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 166/302 (55%), Positives = 234/302 (78%), Gaps = 1/302 (0%)

Query  10   VSLVVPFHDEAEAIDAFFATTVPILEAIGTARFEIVCVNDGSRDGTLDKLIDIAVADPRV  69
            +SLVVP  +E EAI  F+  TV  ++ +     EIV +NDGS+D+T   +  +AV+DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RIVDLTRRFGKEAALTAGIDEAAGAAVILIDADLQDPPALIPAMLERWHAGAEVVAAKRT  129
              + +TR FGKE+AL AG+D+A+G AVI ID DLQDP  +IP ++E+W+AGAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  DRRCDPLMQRVAAALYYRVHNQLSEVEMPENVGDFRLMDRQVVDALRALPERRRFMKGLF  189
            DR  D  ++R +A  +Y++HN++S   + ENVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTEIIEYTRAARSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYIGLAFAVLSF  249
            +WVG +T+++EY RA R +G SKF+GW+ WN+ALEGITSFST PLRVWTYIGL  A +SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAYIVMRTLLFGNLVHGYASLISVMLFvggiqligigvigEYLGRIYHESKQRPVYLV  309
            +YGA +++ TL+FGN V+GY+SL+  +LF+GG+QLIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

127) gtrB in NC_014311


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  260 bits (973),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 168/302 (56%), Positives = 237/302 (79%), Gaps = 1/302 (0%)

Query  11   LSLVVPFYNEGDALHLFFARVVPILESIDAMQFEIVCVNDGSADDTLAKLVAVSHNDPRV  70
            +SLVVP +NE +A+ +F+ + V  ++ + + + EIV +NDGS D T + + A++ +DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  71   RVVDLTRNFGKEAALTAGLDEAQGDAVIPIDADLQDPPELIPTLVGHWRKGAEVVLAQRA  130
              + +TRNFGKE+AL AGLD+A GDAVIPID DLQDP E+IP L+  W+ GAE+VLA+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  131  SRACDSFLKRVTAAAYYRIHNRLSDLKLPQNVGDFRLMDRAVVNALKQLPERHRFMKGLF  190
             R+ D+ LKR TA  +Y++HN++S  K+ +NVGDFRLM R VV+ +K LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  191  AWVGFSTVIVQYEREKRSAGCSKFSGWRLWNFALEGITSFSTLPLRCWTYLGAFVAALAF  250
            +WVG  T +V+Y R  R AG SKF+GW+LWN+ALEGITSFST+PLR WTY+G FVA+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  251  LYGSFIIARTLIFGIVLPGYASElslllffgglqlvglgvvgEYIGRIYDEAKGRPIYLI  310
            LYG+ +I  TL+FG  + GY+S L  +LF+GG+QL+G+GV+GEYIGRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  311  KR  312
            K+
Sbjct  302  KK  303

128) Rpic12D_0539 in NC_012856


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  257 bits (960),  Expect = 6e-70, Method: Compositional matrix adjust.
 Identities = 166/302 (55%), Positives = 236/302 (79%), Gaps = 1/302 (0%)

Query  14   LSLVAPFYNEGEALHLFFARVVPILESIDGMQFEIVCVNDGSADDTLPKLVAVSHADPRV  73
            +SLV P +NE EA+ +F+ + V  ++ +   + EIV +NDGS D T + + A++ +DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  74   RVVDLTRNFGKEAALTAGLDEAQGDAVIPIDADLQDPPELIPTLVAHWRKGAEVVLAQRA  133
              + +TRNFGKE+AL AGLD+A GDAVIPID DLQDP E+IP L+  W+ GAE+VLA+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  134  NRACDSFLKRVTAAAYYRIHNRLSDLKLPENVGDFRLMDRAVVNALKQLPERHRFMKGLF  193
            +R+ D+ LKR TA  +Y++HN++S  K+ ENVGDFRLM R VV+ +K LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  194  AWVGFSTVIVQYEREKRSAGTSKFSGWRLWNFALEGITSFSTLPLRSWTYLGALVAALAF  253
            +WVG  T +V+Y R  R AG SKF+GW+LWN+ALEGITSFST+PLR WTY+G +VA+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  254  CYGAFIILRTMIFGVVVPGYASELSlmlffgglqmiglgmigEYVGRIYDEAKGRPIYLV  313
             YGA +I+ T++FG  V GY+S L  +LF+GG+Q+IG+G++GEY+GRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  314  KR  315
            K+
Sbjct  302  KK  303

129) gtrB in NC_014307


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  256 bits (956),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 167/301 (56%), Positives = 235/301 (79%), Gaps = 1/301 (0%)

Query  11   LSLVVPFYNEGDALHAFFARVIPILEAIESMQFEIVCVNDGSADDTLAKLIAVSHDDPRI  70
            +SLVVP +NE +A+  F+ + +  ++ + + + EIV +NDGS D T + + A++  DP +
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  71   RVIDLTRNFGKEAALTAGLNEAMGDAVIPIDADLQDPPELIPTLIAHWRRGAEVVLAQRA  130
              + +TRNFGKE+AL AGL++A GDAVIPID DLQDP E+IP LI  W+ GAE+VLA+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  131  SRACDSFLKRVTAAAYYRIHNRLSDLKLPENVGDFRLMDRVVVDALRQLPERHRFMKGLF  190
             R+ D+ LKR TA  +Y++HN++S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  191  AWVGFTTVIVQYEREPRSAGQSKFSGWRLWNFALEGITSFSTLPLRSWTYIGLAVAALAF  250
            +WVG  T +V+Y R  R AG SKF+GW+LWN+ALEGITSFST+PLR WTYIGL VA+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  251  FYGTFIIARTLIFGVVVPGYASMlslllffgglqlvglgvvgEYIGRIYDEAKGRPIYLV  310
            +YG+ +I  TL+FG  V GY+S+L  +LF+GG+QL+G+GV+GEYIGRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  311  K  311
            K
Sbjct  302  K  302

130) RSPO_c02721 in NC_017574


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 165/302 (55%), Positives = 235/302 (78%), Gaps = 1/302 (0%)

Query  11   LSLVVPFYNEGDALHAFFARVIPILEAIESMQFEIVCVNDGSADDTLAKLIAVSHDDARI  70
            +SLVVP +NE +A+  F+ + +  ++ + + + EIV +NDGS D T + + A++  D+ +
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  71   RVIDLTRNFGKEAALTAGLNEAMGDAVIPIDADLQDPPELIPTLIAHWHRGAEVVLAQRA  130
              + +TRNFGKE+AL AGL++A GDAVIPID DLQDP E+IP LI  W+ GAE+VLA+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  131  SRACDSLLKRVTAAAYYRIHNRLSDLKLPENVGDFRLMDRIAVDALRQLPERHRFMKGLF  190
             R+ D+ LKR TA  +Y++HN++S  K+ ENVGDFRLM R  V+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  191  AWVGFTTVIVQYEREPRSAGQSKFSGWRLWNFALEGITSFSTLPLRSWTYIGLAVAALAF  250
            +WVG  T +V+Y R  R AG SKF+GW+LWN+ALEGITSFST+PLR WTYIGL VA+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  251  FYGTFIIARTLIFGVVVPGYASMlslllffgglqlvglgvvgEYIGRIYDEAKGRPIYLV  310
            +YG+ +I  TL+FG  V GY+S+L  +LF+GG+QL+G+GV+GEYIGRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  311  KR  312
            K+
Sbjct  302  KK  303

131) Sde_0135 in NC_007912


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  255 bits (954),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 154/298 (52%), Positives = 220/298 (74%), Gaps = 1/298 (0%)

Query  6    ISIVVPAYNEQEVITHFHERLAAVMNEMANYRWEVVYVNDGSKDDTLKILHGLRDADEHV  65
            IS+VVP +NE+E I  F   +    +E+  Y  E+V++NDGSKD T  I+++L  +D  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  66   AVLNLSRNFGKEIALTAGLDHSSGDAIVVIDADLQDPPELIPTLVERWEEGADVAYAKRK  125
              L+++RNFGKE AL AGLDH+SGDA++ ID DLQDP E+IP L+E+W+ GA++  AKR 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  126  KRDGESAFKKATAHIFYRFMAKIGDVVLPEDTGDFRLLNRKALDALNSVRERHRFMKGLF  185
             R  ++ +K+ TA+ FY++  KI+   + E+ GDFRL++R  ++ ++ + ER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  186  AWIGFHQVAVEYDRDPRFAGVTKWNYWKLWNLALEGFTSFTTMPLKLATYIGVLTAFGSF  245
            +W+G +   VEY R  R AG++K N WKLWNLALEG+TSF+T PL++ TYIG++ A  SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  246  VYGLYMIITTLINGNDVAGYPSLVVIVLFLGGIQLMSIGVIGEYLGRIFNETKKRPLY  303
            +YG  MII TL+ GN V GYPSL+V +LFLGG+QL++IGV+GEY+GRI+ ETK RP Y
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

132) Pfl01_1379 in NC_007492


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  255 bits (953),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 161/304 (53%), Positives = 233/304 (77%), Gaps = 1/304 (0%)

Query  31   VKLSLVIPVFNEEDSLDGFLLRIRQVFEQETLVELELVFVNDGSSDTTLERLLNCQQSDS  90
            +K+SLV+PVFNEE+++  F   +R+ F++    E+E+VF+NDGS D+T   +     SD+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  91   RIRIVDLSRNFGKEAALSAGLQTATGQIVVPIDVDLQDPPEVILQMIERWREGFEVVLGH  150
             +  + ++RNFGKE+AL AGL+ A+G+ V+PIDVDLQDP EVI ++IE+W+ G E+VL+ 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  151  RISRRNDSWAKQTSAGWFYRLHNKIAEQALPENVGDFRLMDRCVVDALLTLPESRRFMKG  210
            R  R  D++ K+ +A WFY+LHNKI+   + ENVGDFRLM R VV+ +  LPE   FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  211  LFAWVGFRTTQVEYERPERAAGQSKFNGWRLWNFALEGITSFSTEPLRIWTYLGALVSLV  270
            +++WVG +T  VEY R+ER AG SKFNGW+LWN+ALEGITSFST PLR+WTY+G +V+ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  271  SFAFAMFIVVRTLIHGVDMPGYASLMVAVTFlgglqligigvlgEYLGRTYIEAKRRPVF  330
            SF ++  +++ TL+ G  + GY+SL+V++ FLGG+QLIGIGVLGEY+GR Y+E+K RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  331  LVRR  334
            ++++
Sbjct  300  ILKK  303

133) Saut_1555 in NC_014506


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  254 bits (950),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 170/306 (56%), Positives = 235/306 (77%), Gaps = 8/306 (2%)

Query  8    ISIVVPCYNEEDVIDIFLEKIFIVLKELD--RSYE--IVFVNDGSRDKTLEILKQKAKEY  63
            IS+VVP +NEE+ I +F    +  ++E++  ++YE  IVF+NDGS+D T  I++  A   
Sbjct  3    ISLVVPVFNEEEAIPVF----YKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSD  58

Query  64   DEVRVISLSRNFGKEAALSAGLDMADGEVVVPIDVDLQDPPELILDFVKKYEEGYDVVVG  123
              V  +S++RNFGKE+AL AGLD A G+ V+PIDVDLQDP E+I +++ K + G ++V++
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  124  KRVDRTTDSFAKRISAEFFYKIHNKISDIEIPHNVGDYRLMSRRVVDELKQLPESQRFMK  183
            KR DR+TD+  KR +AE FYK+HNKIS   I +NVGD+RLMSR VV+++K LPE + FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  184  GLFAWLGFKTAVVEYKRDSRAAGETSFNGWKLWNFALDGITSFSTAPLRVWFYIGLVIAF  243
            G+++W+G +T VVEY R  R AG + FNGWKLWN+AL+GITSFST PLRVW YIGL +A 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  244  ISFIYGSWIILKTLIFGVDSPGYASMITVVLFlggiqlmgigilgEYIGRIYIESKNRPV  303
            ISF+YG+W+I+ TL+FG    GY+S++  +LFLGG+QL+GIG+LGEYIGRIY+E+K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  304  YIIEDE  309
            YI+   
Sbjct  299  YILKKG  304

134) Reut_A2635 in NC_007347


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  253 bits (946),  Expect = 7e-69, Method: Compositional matrix adjust.
 Identities = 168/302 (56%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   LSLVVPCYNESQSIGRFFDCVVPILESIERIRFEIVLVNDGSTDDTLDQMLACGQRDERV  69
            +SLVVP +NE ++I  F+  V   ++ +     EIV++NDGS D T   + A +  D  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVVDLTRNFGKEAALTAGLDEALGDAVIPMDVDLQDPPSLIPQLVARWREGAEVVLAQRS  129
              + +TRNFGKE+AL AGLD+A GDAVIP+DVDLQDP  +IP+L+ +W+ GAE+VLA+RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRECDSWLKRVTAAGYYQIHNRLSDLKLPVNVGDFRLMDRVVVNALKQLPERHRFMKGLF  189
             R  D++LKR TA  +Y++HN++S  K+  NVGDFRLM R VV+ +K LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYKTAIVRYEREPRSAGRSKFSAWRLWNLALEGITSFSTLPLRSWTYIGLLIAVSAF  249
            +WVG +T +V Y R  R AG SKF++W+LWNLALEGITSFST+PLR WTYIGL++A  +F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGTFIVARTLIFGVDVPGYASLLSvvlflggiqlvglgvvgEYIGRIYDEAKGRPIYLV  309
            LYG+ ++  TL+FG  V GY+SLL  +LFLGG+QL+G+GV+GEYIGRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

135) Tola_1122 in NC_012691


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  252 bits (942),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 156/303 (52%), Positives = 224/303 (74%), Gaps = 4/303 (1%)

Query  7    TISLVVPVYNEEESIDTFIETIDKELAPLRD-QLEIVFVNDGSRDKTREVVEKAIERDSR  65
             ISLVVPV+NEEE+I  F  T+ +E+  L+  ++EIVF+NDGS+D T  +++     D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  66   VTLINLARNFGKEAAMTAGLAHARGDAIVPMDVDLQDPPALVLEFVRMWQEEGYDTVYGV  125
            V  ++++RNFGKE+A+ AGL HA GDA++P+DVDLQDP  ++ +++  WQ  + + V + 
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  126  RTDRNADTPMKRLTAGGFYRFFNAVSTTTKIPENAGDFRLMDRRVVEAINQLPERNRFMK  185
            R+DR++D  +KR TA  FY++ N +ST  KI EN GDFRLM R VVE I+ LPERN FMK
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTP-KIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWAGFRSIGVPYARPERAAGTTKFNYWKLWNFALDGLFSFSSWPLRVWSYIGAAVAG  245
            G+++W G ++  V Y R+ER AG +KFN WKLWN+AL+G+ SFS+ PLRVW+YIG  VA+
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  ISFLYMMVIILKVIFIGVDSPGYASLMCVILFLGGMQLLSIGIMGEYIGRMFLEVKQRPV  305
            ISFLY   +I+  + +G    GY+SL+  ILFLGG+QL++IG++GEYIGR++LE K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  FLI  308
            +++
Sbjct  299  YIL  301

136) HydHO_1541 in NC_020411


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  252 bits (941),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 155/303 (52%), Positives = 223/303 (74%), Gaps = 0/303 (0%)

Query  5    KKIAIVIPAYNEEDNVEIAYKRLKEVLDSTNYDYELIFVDDGSKDNTLSKLLELYEKDKK  64
             KI++V+P +NEE+ + + YK ++E  +   Y+ E++F++DGSKD T S +  L   D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VKVISLSRNFGKEIALSAGLDYVDADAVIPFDADLQHPPEVIPELLAKFEEGYDVVNAVK  124
            V  +S++RNFGKE AL AGLD   +DAVIP+D DLQ+P EVIP+L+ K + G ++V A +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  RKRGGENFFKRFMSETFYKIINNVSSVEIPRNVGDFRLISKDALNAVKQIRERKRFMKGI  184
              R+ +  +KR  +E FYK+ N++S+  I  NVGDFRL+S++ ++ +K + ER+ FMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  FAWVGFKTASVYYETAPRHAGKTKWNYFKLINLAIEGITSFSIAPLRLASLLGLFVSFVA  244
            ++WVG +T  V Y  A R AG +K N  KL NLA+EGITSFS  PLR+ + +GLFV+ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FLYAMWIIIQKLIYGNPVKGYPSIMVAILFLGGVQLITIGIIGEYVGRIYEEVKQRPLYI  304
            FLY+ W+II+ L++GNPV+GYPS++V+ILFLGGVQLI IG++GEY+GRIY E K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  305  VKK  307
            +KK
Sbjct  301  LKK  303

137) HydSN_1584 in NC_020814


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  252 bits (941),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 155/303 (52%), Positives = 223/303 (74%), Gaps = 0/303 (0%)

Query  5    KKIAIVIPAYNEEDNVEIAYKRLKEVLDSTNYDYELIFVDDGSKDNTLSKLLELYEKDKK  64
             KI++V+P +NEE+ + + YK ++E  +   Y+ E++F++DGSKD T S +  L   D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VKVISLSRNFGKEIALSAGLDYVDADAVIPFDADLQHPPEVIPELLAKFEEGYDVVNAVK  124
            V  +S++RNFGKE AL AGLD   +DAVIP+D DLQ+P EVIP+L+ K + G ++V A +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  RKRGGENFFKRFMSETFYKIINNVSSVEIPRNVGDFRLISKDALNAVKQIRERKRFMKGI  184
              R+ +  +KR  +E FYK+ N++S+  I  NVGDFRL+S++ ++ +K + ER+ FMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  FAWVGFKTASVYYETAPRHAGKTKWNYFKLINLAIEGITSFSIAPLRLASLLGLFVSFVA  244
            ++WVG +T  V Y  A R AG +K N  KL NLA+EGITSFS  PLR+ + +GLFV+ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FLYAMWIIIQKLIYGNPVKGYPSIMVAILFLGGVQLITIGIIGEYVGRIYEEVKQRPLYI  304
            FLY+ W+II+ L++GNPV+GYPS++V+ILFLGGVQLI IG++GEY+GRIY E K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  305  VKK  307
            +KK
Sbjct  301  LKK  303

138) Dret_1173 in NC_013223


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  250 bits (935),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 165/302 (55%), Positives = 228/302 (76%), Gaps = 4/302 (1%)

Query  13   LSIICPLRDEEDSVQPFF--ARLLPVLKDLELDFEIICVNDGSQDKTLERLQAARELESR  70
            +S++ P+ +EE+++  F+   R +  LK  E+  EI+ +NDGS+D T   ++A    ++ 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  71   IRILDLSRNFGKEAALTCGLDHTRGQAVIPIDADLQDPPELIVDMVHMWQQGCEVVLAQR  130
            +  L ++RNFGKE+AL  GLDH+ G+AVIPID DLQDP E+I ++++ WQ G E+VLA+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  131  TDRSSDNWLKRKTAEWFYRLHNAISRPTIIPNVGDFRLMDRKVVEALKMLPERGRFMKGI  190
            +DRS+D +LKRKTAEWFY+LHN IS P I  NVGDFRLM R VVE +K+LPER  FMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  191  FSWVGFRQAILPYARDVRKTGKSKFSTWRLWNFAMDGITSFSTVPLRIWTYLGLAIALAS  250
            +SWVG +  ++ Y R  R +G SKF+ W+LWN+A++GITSFST PLR+WTY+GL +A  S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  251  FAYGSFIVGRTLIFGRDFPGYASLITVilffggvqliglgvvgEYIGRIHTETKARPIYV  310
            F YG+ ++  TL+FG    GY+SL+  ILF+GGVQLIG+GV+GEYIGRI  ETK+RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  311  VR  312
            ++
Sbjct  301  LK  302

139) gtrB2 in NC_009659


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  250 bits (933),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 138/303 (46%), Positives = 229/303 (76%), Gaps = 2/303 (0%)

Query  19   KLSVIVPLFNEESVLPIFHERLKNALSGLHQ-DCEIIYVDDGSTDKSHFLLTQLRLANPK  77
            K+S++VP+FNEE  +P+F   +++ +  L   + EI++++DGS D ++ ++  L +++P 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  78   IGVARFTRNFGKEEAMSAGLRLATGDAVIIIDADLQDPPELIPEMLAAWLGGADIVNMRR  137
            +    FTRNFGKE A+ AGL  A+GDAVI ID DLQDP E+IP+++  W +GA++V  +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  138  RFRSGESWLKKATAHAFYRVINRLSDVPVPADVGDFRLLSRRAVDALNLLEERNRFMKGL  197
              RS +++LK+ TA+ FY++ N++S   +  +VGDFRL+SR  V+ ++LL ERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  198  FAWVGYRHVTLDYDRDARAAGTTKWRYWRLWNFALEGITGFSVAPLKIATYLGLLFSGMA  257
            ++WVG +   ++Y R  R AG +K   W+LWN+ALEGIT+FS  PL++ TY+GL+ ++++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  258  FLYALYFLIKTLLIGESVRGFPTLIVTVMILGGLQLMAIGIIGEYLGRLFIESKRRPLYL  317
            FLY+   +I TL++G++VRG+P+L+V++++LGG+QL++IG++GEY+GR+++E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  318  LEQ  320
            L +
Sbjct  301  LKK  303

140) GEM_4602 in NC_018514


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  249 bits (931),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 169/300 (57%), Positives = 230/300 (77%), Gaps = 1/300 (0%)

Query  10   VSLVVPFHDEDEAIDAFFAETLPVLESVDTVRFEIVCINDGSRDRTLDRLLAVAAGDPRV  69
            +SLVVP  +E+EAI  F+  T+  ++ +     EIV INDGS+D T   + A+A +DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRRFGKEAALTAGLDEAAGAAVILIDADLQDPPALIPAMIERWRAGAEVVAAKRT  129
              + +TR FGKE+AL AGLD+A+G AVI ID DLQDP  +IP +IE+W+AGAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRRCDPYMQRAAAALYYRVHNALSEVAMPENVGDFRLMDREVVDALRALPERRRFMKGLF  189
            +R  D  ++R +A  +Y++HN +S   + ENVGDFRLM REVV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTAIVEYTRAPRSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYVGLTFAMLSL  249
            +WVG +T +VEY RA R +G SKF+GW+ WN+ALEGITSFST PLRVWTY+GL  A +S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  AYGAFIVVRTLLFGNPVHGYPSLISvvlfvggiqligigvigEYLGRIYHESKQRPVYLV  309
             YGA +++ TL+FGNPV+GYPSL+  +LF+GG+QLIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

141) gtrB in NC_007973


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  248 bits (925),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 171/302 (57%), Positives = 234/302 (78%), Gaps = 1/302 (0%)

Query  10   LSLVVPFYNEGTALQTFFDRVVPILESVPATRFEIVCVNDGSADDTLARLVDISRRDGRI  69
            +SLVVP +NE  A+  F+ + V  ++ + +   EIV +NDGS D T + +  ++  D  +
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGIDEAFGDAVIPIDADLQDPPELIPTLVEKWRQGAEVVLAQRA  129
              + +TRNFGKE+AL AG+D+A GDAVIPID DLQDP E+IP L+EKW+ GAE+VLA+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRASDSFLKRVTATAYYRVHNWLSDLKIPENVGDFRLMDRAVVNALKQLPERHRFMKGLF  189
             R++D+ LKR TA  +Y++HN +S  KI ENVGDFRLM R VV+ +K LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGFNTVVVQYERAPRCAGESKFSGWRLWNLALEGITSFSTLPLRSWTYVGSFIAMIAF  249
            +WVG +T VV+Y RA R AG SKF+GW+LWNLALEGITSFST+PLR WTY+G F+A I+F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  CYGTFIVARTLILGVDVPGYASVlslllffggiqliglgvlgEYIGRIYDESKGRPIYLV  309
             YG+ ++  TL++G  V GY+S+L  +LF+GG+QLIG+GVLGEYIGRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  KR  311
            K+
Sbjct  302  KK  303

142) yfdH in NC_010528


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  246 bits (917),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 168/302 (56%), Positives = 229/302 (76%), Gaps = 1/302 (0%)

Query  10   LSLVVPCYNESDSIGRFFDCVIPVLEAIDAIRFELVLVNDGSSDDTLDQLIAYSHRDPRV  69
            +SLVVP +NE ++I  F+  V   ++ + +   E+V++NDGS D T   + A +  DP V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVVDLTRNFGKEAALTAGLDEALGDAVIPIDADLQDPPSLIPELVRRWREGAEVVLAQRS  129
              + +TRNFGKE+AL AGLD+A GDAVIPID DLQDP  +IP+L+ +W+ GAE+VLA+RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRACDSWLKRVTAGAYYRVHNKLSDQKLPVNVGDFRLMDRVVVNALKQLPERRRFMKGLF  189
             R+ D++LKR TA  +Y++HNK+S  K+  NVGDFRLM R VV+ +K LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVPYEREPRSAGHSKFSGWRLWNFALEGITSFSTMPLRSWTYIGVAIALGAF  249
            +WVG +T +V Y R  R AG SKF+GW+LWN+ALEGITSFST PLR WTYIG+ +A  +F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  GYGAFIVARTLVLGIDVPGYASLLSvllflggiqliglgvvgEYVGRIYDEAKGRPIYLV  309
             YGA ++  TLV+G  V GY+SLL  +LFLGG+QLIG+GV+GEY+GRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

143) CNE_1c07270 in NC_015726


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  246 bits (918),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 166/302 (55%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   LSLVVPCYNESEGIGHFFDSVIPVLESIDAIRFEIVLVNDGSSDDTLDKLIAYSRRDARV  69
            +SLVVP +NE E+I  F+ +V   ++ + +   EIV++NDGS D T   + A +  D+ V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVVDLTRNFGKEAALTAGLDEALGDAVIPMDADLQDPPSLIPELVMRWREGAEVVLAQRS  129
              + +TRNFGKE+AL AGLD+A GDAVIP+D DLQDP  +IP+L+ +W+ GAE+VLA+RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRVCDSWLKRVTAGAYYRIHNKLSDQKLPVNVGDFRLMDRVVINALKQMPERRRFMKGLF  189
             R  D++LKR TA  +Y++HNK+S  K+  NVGDFRLM R V++ +K +PER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYKTAIVRYEREMRSAGRSKFSGWRLWNLALEGITSFSTIPLRSWTYIGVLIALGAF  249
            +WVG +T +V Y R  R AG SKF+GW+LWNLALEGITSFST+PLR WTYIG+++A  +F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  CYGTFIVARTLVLGIDVPGYASLLSvllflggiqliglgvvgEYVGRIYDEAKGRPIYLV  309
             YG+ ++  TLV+G  V GY+SLL  +LFLGG+QLIG+GV+GEY+GRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

144) h16_A0725 in NC_008313


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  246 bits (918),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 165/302 (55%), Positives = 232/302 (77%), Gaps = 1/302 (0%)

Query  10   LSLVVPCYNESESISKFFASVIPVLESIDAIRFEIVLVNDGSSDDTLDKLIAYSRRDARV  69
            +SLVVP +NE E+I+ F+ +V   ++ + +   EIV++NDGS D T   + A +  D+ V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVVDLTRNFGKEAALTAGLDEALGDAVIPMDADLQDPPSLIPELVMRWREGAEVVLAQRS  129
              + +TRNFGKE+AL AGLD+A GDAVIP+D DLQDP  +IP+L+ +W+ GAE+VLA+RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRVCDSWLKRVTAGAYYRIHNKLSEQKLPVNVGDFRLMDRVVINALKQMPERRRFMKGLF  189
             R  D++LKR TA  +Y++HNK+S  K+  NVGDFRLM R V++ +K +PER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVPYERESRSAGRSKFSGWRLWNLALEGITSFSTIPLRSWTYIGVLIALGAF  249
            +WVG +T +V Y R  R AG SKF+GW+LWNLALEGITSFST+PLR WTYIG+++A  +F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  CYGTFIVARTLILGIDVPGYASLLSvllflggiqliglgvvgEYVGRIYDEAKGRPIYLV  309
             YG+ ++  TL++G  V GY+SLL  +LFLGG+QLIG+GV+GEY+GRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

145) BamMC406_3938 in NC_010552


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  246 bits (917),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 167/300 (56%), Positives = 233/300 (78%), Gaps = 1/300 (0%)

Query  10   ISLVVPFHDEEETIDAFFAETLPILESVAAVRFEIICINDGSRDRTLDRLLAIAAGDARV  69
            ISLVVP  +EEE+I  F+  T+  ++ + +   EI+ INDGS+D T   + A+A +D+ V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   HVVDLTRRFGKEAALTAGLDEAAGAAVILIDADLQDPPALIPAMIERWRGGAEVVAAKRT  129
              + +TR FGKE+AL AGLD+A+G AVI ID DLQDP  +IP +IE+W++GAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  DRMCDPYLQRaaaaLYYRVHNALSEVEMPENVGDFRLMDREVVDALRALPERRRFMKGLF  189
            DR  D  L+R +A  +Y++HN +S   + ENVGDFRLM REVV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGFRTEIIEYTRAPRSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYVGITFAMLSL  249
            +WVG +T+++EY RA R +G SKF+GW+ WN+ALEGITSFST PLRVWTY+G+  A +S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAFIVVRTLLFGNPVHGYPSLISvvlfvggiqligigvigEYLGRIYHESKQRPVYLV  309
            +YGA +++ TL+FGNPV+GYPSL+  +LF+GG+QLIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

146) yfdH in NC_020055


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  246 bits (920),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 163/302 (54%), Positives = 232/302 (77%), Gaps = 1/302 (0%)

Query  7    LSIIIPVYNEEDVLCMFMKRVSEVIKKIHNIKAEYIFINDGSTDDTLINLIALKKTYPQI  66
            +S+++PV+NEE+ + +F K V E ++ +     E +FINDGS D T   + AL  + P +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  67   KIIDLSRNFGKEAAMTAGLQYANGSIIIPIDADLQDPPELIPEMISKWQEGFDVVLAHRS  126
              + ++RNFGKE+A+ AGL+ A+G  +IPID DLQDP E+IP++I KWQ G ++VLA RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  127  NRDSDSFLKRFTARCFYWLNNKISTPHIPDNVGDYRLISRPVVDALNTLPESKRFMKGLF  186
            +R +D+ LKR TA  FY L+NKISTP I +NVGD+RL+SR VV+ ++ LPE + FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  187  AWVGFKTTQVDYVRDERAAGESKFNGWKLWNFALEGLTSFGTVPLRIWTYVGALVAGISF  246
            +WVG +T  V+YVR ER AG SKFNGWKLWN+ALEG+TSF+T PLR+WTY+G +VA+ISF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  247  ILTLKILIQVIFLGIDVPGYASIMVAVTFlgglqligigtlgEYLGRAYMETKNRPIFIV  306
            +    ++I+ + +G  V GY+S++V++ FLGG+QLIGIG LGEY+GR Y+ETK+RP +I+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  307  RK  308
            +K
Sbjct  302  KK  303

147) Ple7327_4042 in NC_019689


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  246 bits (920),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 146/301 (49%), Positives = 215/301 (72%), Gaps = 0/301 (0%)

Query  10   LSVVVPCYNEEENIHYLFERLTSALDRLNLKYEIICVNDGSRDDTLKYLVEYHRRNPAIK  69
            +S+VVP +NEEE I  ++  +    +      EI+ +NDGS+D T   +      +P + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  70   VVNLSRNFGKEIALSAGIDYASGQAVVPIDADLQDPPEFIEQLLEKWHEGYDVVYGVRRS  129
             ++++RNFGKE AL AG+D ASG+AV+PID DLQDP E I +L+EKW+ G ++V + R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  RQGESWLKRSTAGAFYRVISGMTHIQIPKDTGDFRLLDRRVVEALKLLPERRRFMKGLFA  189
            R  +++LKR TA  FY++ + ++  +I  + GDFRL+ R VVE +KLLPER  FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  190  WVGFKQTAIEYDRDPRYQGTTKWNYWKLWNFALEGITSFSFVPLKVWSYIGVFVSLISFV  249
            WVG +   +EY R  R  G +K N WKLWN+ALEGITSFS  PL+VW+YIG+FV+ ISF+
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  250  YASFLVIRTLILGIDVPGYASIMVAVLFLGGVQLISLGFIGEYLGRVYDEVKQRPLYLVR  309
            Y++ ++I TL++G  V GY+S++V++LFLGGVQLI++G +GEY+GR+Y E K RP Y+++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  310  D  310
             
Sbjct  303  K  303

148) PSEBR_a1356 in NC_015379


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  246 bits (919),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 160/304 (53%), Positives = 233/304 (77%), Gaps = 1/304 (0%)

Query  13   LALSLVIPVYNEVQSIDVFMARIDQVFAHEALVSLELVFVNDGSVDDTLVLLLERQKTDP  72
            + +SLV+PV+NE ++I VF   + + F +     +E+VF+NDGS D T  ++     +DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  73   RIRVVDLSRNFGKEAALSAGLQAARGQAVVPIDVDLQDPPEVILEMIAHWRNGAEVVLGH  132
             +  + ++RNFGKE+AL AGL+ A G+AV+PIDVDLQDP EVI ++I  W+ GAE+VL+ 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  133  RINRDSDSWAKQVSANGFYRLHNKIADHKLPENVGDFRLMDRCVVDALQTLPESRRFMKG  192
            R +R +D++ K+ +A+ FY+LHNKI+  K+ ENVGDFRLM R VV+ ++ LPE   FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  193  LFAWVGFRTTYVDYVRPERAAGESKFNGWRLWNFALEGITSFSTEPLRIWTYLGLCVSLV  252
            +++WVG +T  V+YVR+ER AG SKFNGW+LWN+ALEGITSFST PLR+WTY+GL V+ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  253  SFAFAIFIVLRTLISGVDLPGYASLMVAVTFlgglqligigvlgEYLGRTYIESKRRPVF  312
            SF ++  +++ TL+ G  + GY+SL+V++ FLGG+QLIGIGVLGEY+GR Y+E+K RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  313  LVRR  316
            ++++
Sbjct  300  ILKK  303

149) PCC7424_4457 in NC_011729


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  245 bits (914),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 144/307 (47%), Positives = 223/307 (73%), Gaps = 4/307 (1%)

Query  8    IELSVVVPLYNEELNIDTLFDRLLSTLNELHLTYE--IVCIDDGSRDNTLDRLIEYHFRH  65
            + +S+VVP++NEE  I  ++ + +  ++EL   YE  IV I+DGS+D T   +      +
Sbjct  1    MKISLVVPVFNEEEAIPVFY-KTVREFQELK-PYEVEIVFINDGSKDATESIINALAVSD  58

Query  66   PLIKVVALSRNFGKEIALTAGIDHAQGNAIVPIDADLQDPPELIGQLLDKWREGYEVVYA  125
            PL+  ++++RNFGKE AL AG+DHA G+A++PID DLQDP E+I +L++KW+ G E+V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  126  RRRVRQGESWLKRFTANAFYRVIAKISRVSIPRDTGDFRLLDRRVVEALKQMPERTRFMK  185
            +R  R  +++LKR TA+ FY++  KIS   I  + GDFRL+ R VVE +K +PER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWVGFKQTYILYDRSPRYKGKTTWNYWKLWNFALDGITSFSLVPLKVWSYLGLVLSI  245
            G+++WVG +   + Y R+ R  G +  N WKLWN+AL+GITSFS  PL+VW+Y+GL ++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  LAFIYASFLVARTLIFGIDVPGYASLMVTVLFIGGVQLITLGIIGEYLGRVYEEVKQRPL  305
            ++F+Y++ ++  TL+FG  V GY+SL+V++LF+GGVQLI +G++GEY+GR+Y E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLVRQSH  312
            Y++++++
Sbjct  299  YILKKGR  305

150) NIES39_D06260 in NC_016640


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  244 bits (910),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 149/307 (49%), Positives = 225/307 (74%), Gaps = 6/307 (1%)

Query  15   VQLSIVAPCYNEEPNLD--YLLSRLLAVIQPLHITYEIICVNDGSQDDTLAKLIKHHHFN  72
            +++S+V P +NEE  +   Y   R +  ++P ++  EI+ +NDGS+D T   +I+    +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDAT-ESIINALAVS  57

Query  73   NNIKV-INLSRNFGKEIALTAGLDHARGAAVIPIDADLQDPPELIVEMLEKWREGYDVVY  131
            + + V ++++RNFGKE AL AGLDHA G AVIPID DLQDP E+I +++EKW+ G ++V 
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVL  117

Query  132  AKRRSRHGETWLKQITANGFYRLLQKMTPVHIPQDTGDFRLMDRQVVEALKKLPETHRFM  191
            AKR  R  + +LK+ TA+ FY+L +K++   I ++ GDFRLM R+VVE +K LPE + FM
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  192  KGLFAWVGFKQTALEYDRLPRYKGRTKWNYWQLWNLAIEGITSFSALPLKVWSYMGLLIS  251
            KG+++WVG +   +EY R  R  G +K N W+LWNLA+EGITSFS++PL+VW+Y+GL+++
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  252  FGAFIYALFLIVRTLIFGIDVPGYASLMVAILFMGGVQLISLGVIGEYLGRIYAEVKRRP  311
              +F+Y+  +I+ TL+FG  V GY+SL+V+ILF+GGVQLI++GV+GEY+GRIY E K RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  312  LYLIRDT  318
             Y+++  
Sbjct  298  KYILKKG  304

151) Bamb_3431 in NC_008391


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  244 bits (911),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 168/300 (56%), Positives = 232/300 (78%), Gaps = 1/300 (0%)

Query  10   ISLVVPFHDEEETIDAFFAETLPILESVAVVRFEIVCINDGSRDRTLDRLLAIAAGDARV  69
            ISLVVP  +EEE+I  F+  T+  ++ +     EIV INDGS+D T   + A+A +D+ V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   HVVDLTRRFGKEAALTAGLDEAAGAAVILIDADLQDPPALIPAMIERWRGGAEVVAAKRT  129
              + +TR FGKE+AL AGLD+A+G AVI ID DLQDP  +IP +IE+W++GAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  DRLCDPYLQRaaaaLYYRVHNALSEVEMPENVGDFRLMDREVVDALRALPERRRFMKGLF  189
            DR  D  L+R +A  +Y++HN +S   + ENVGDFRLM REVV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGFRTEIIEYTRAPRSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYVGITFAMLSL  249
            +WVG +T+++EY RA R +G SKF+GW+ WN+ALEGITSFST PLRVWTY+G+  A +S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAFIVVRTLLFGNPVHGYPSLISvvlfvggiqligigvigEYLGRIYHESKQRPVYLV  309
            +YGA +++ TL+FGNPV+GYPSL+  +LF+GG+QLIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

152) HEAR1604 in NC_009138


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  244 bits (910),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 141/301 (47%), Positives = 224/301 (75%), Gaps = 2/301 (0%)

Query  20   LTVVVPVFNEESVLPIFHERLEKALSALNH-EWEVIYVDDGSTDRTHFILQQLRANSPKV  78
            +++VVPVFNEE  +P+F   + + +  L+  E E+++++DGS D T+ I++ L  + P V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  79   GVARFTRNFGKEEAMSAGLRLARGDAVVIIDADLQDPPELIPVMVEAWLEGVDIVNMRRS  138
                FTRNFGKE A+ AGL  A GDAV+ ID DLQDP E+IP ++E W  G ++V  +RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  139  HRSGESWFKKATAHAFYRVINRLSEVPVPEDVGDFRLLSRRAIDALNLLEERNRFMKGLF  198
            +RS ++++K+ TA+ FY++ N++S   + E+VGDFRL+SR  ++ ++LL ERN FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  199  AWIGFPQVTLNYSRDARAAGHSKWRYWRLWNFALEGITGFSVAPLKIATYVGLACAGITF  258
            +W+G     ++Y R  R AG SK   W+LWN+ALEGIT+FS  PL++ TY+GL  A+I+F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  259  IYAAYFLIKTLFIGESVKGFPTLIVTVMILGGLQLMAIGIIGEYLGRLFIESKRRPLYLL  318
            +Y+A  +I TL +G++V+G+P+L+V++++LGG+QL++IG++GEY+GR+++E+K RP Y+L
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  319  E  319
             
Sbjct  302  K  302

153) Syn6312_3505 in NC_019680


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  243 bits (905),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 139/304 (46%), Positives = 217/304 (72%), Gaps = 4/304 (1%)

Query  8    LSLVIPCYNEAANLTQLLTRIAA--TLAPLELNYEVICVNDGSRDQTLPQLIEQHQQNPR  65
            +SLV+P +NE   +  +   +     L P E+  E++ +NDGS+D T + +      +P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  66   IKVINFSRNFGKEIALTAGIDHSRGRAVIPLDADLQDPPELIPEMLSRWQEGFDVVYATR  125
            +  ++F+RNFGKE AL AG+DH+ G AVIP+D DLQDP E+IP+++ +WQ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  126  RTRAQDSWLKRRTAEGFYRVMAWLSDTPIPANTGDFRLLDRAVVNALKQLPERNRFMKGL  185
              R+ D++LKR+TAE FY++   +S   I  N GDFRL+ R VV+ +K LPERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  186  FSWVGFRQTVIYYDRPGRTGGQSSWNYWRLWNFALDGIVGFSVKPLKIWLYVGLFISLLA  245
            +SWVG +  V+ Y R+ R +G S  N W+LWN+AL+GI +FS  PL++W Y+GLF++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  246  LIYAGILVFRTITYGRDIPGYASLMVAILFLGGIQLLTLGIMGEYLGRIYAEVKGRPLYI  305
            ++Y++ +++ T+ +G  + GY+SL+V+ILFLGG+QL+ +G++GEY+GRIY E K+RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  306  IRES  309
            ++ +
Sbjct  301  LKKG  304

154) MYA_5881 in NC_017922


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  243 bits (907),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 174/302 (58%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   VSLVVPFYNEGEAVERFFDVVIPLMAGIEAIRFEIVCVNDGSRDDTLDRLIRASMSDRRV  69
            +SLVVP +NE EA+  F+  V  +   + +   EIV +NDGS+D T   +   ++SD  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RIIDLTRNFGKEAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAQRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIP+D DLQDP  +IP +IE W+ GAE+V A+RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRACDSFAKRTTAAIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRSLPERHRFMKGLF  189
             R+ D+  KR TA  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQRDARSAGHSKFSGWKLWNLALEGITSFSTVPLRSWTYIGVCIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWNLALEGITSFST PLR WTYIG+ +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGAFIIARTLLFGNPVLGYPSLLSIMLFiggieligigvvgeyvgriyDETKQRPVYLV  309
            LYGA +I  TL+FGNPV GYPSLL  +LF+GG++LIGIGV+GEY+GRIY ETK RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

155) Bcep1808_6483 in NC_009254


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  243 bits (907),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 174/302 (58%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   VSLVVPFYNEGEAVERFFDVVIPLMAGIEAIRFEIVCVNDGSRDDTLDRLIRASMSDRRV  69
            +SLVVP +NE EA+  F+  V  +   + +   EIV +NDGS+D T   +   ++SD  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RIIDLTRNFGKEAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAQRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIP+D DLQDP  +IP +IE W+ GAE+V A+RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRACDSFAKRTTAAIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRSLPERHRFMKGLF  189
             R+ D+  KR TA  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQRDARSAGHSKFSGWKLWNLALEGITSFSTVPLRSWTYIGVCIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWNLALEGITSFST PLR WTYIG+ +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGAFIIARTLLFGNPVLGYPSLLSIMLFiggieligigvvgeyvgriyDETKQRPVYLV  309
            LYGA +I  TL+FGNPV GYPSLL  +LF+GG++LIGIGV+GEY+GRIY ETK RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

156) Cyan10605_0680 in NC_019776


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  243 bits (907),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 145/302 (49%), Positives = 214/302 (71%), Gaps = 0/302 (0%)

Query  7    LSLLIPCYNEEENLPVLFSRLESVLQTLNLNYEIVCINDGSKDNTLKCLVEFHQRDKRIK  66
            +SL++P +NEEE +PV++  +    +    + EIV INDGSKD T   +  +   D  + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  67   IINLSRNFGKEIAMSAGLDYTKGKTVIPIDADLQDPPELIIDLLAKWREGYDVVYAVRKT  126
             ++++RNFGKE A+ AGLD + G +VIPID DLQDP E+I +L+ KW+ G ++V A R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  127  RQGESWIKRKTAEYFYSLIAKISTIPIPANTGDYRLLDEKVVKALRKIPERNRFMKGLFS  186
            R  ++++KRKTAE FY L  KIST  I  N GD+RL+   VV  ++ +PERN FMKG++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  187  WVGYKQTAIYFDRFPRYGGKTSFNYWKLWNFALDGITSFSSIPLKIWSYFGLFISFISLL  246
            WVG +   + + R  R +G + FN WKLWN+AL+GITSFS++PL++W+Y+GLF++ IS+L
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  247  YGLFLVLKTIISGVDLPGYASTIVAILFLGGIQLITLGVIGEYIARIYEEVKQRPLYLIR  306
            YG  +++ T++ G  + GY+S +V+ILFLGG+QLI +GV+GEYI+RIY E K RP Y+++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  307  ET  308
              
Sbjct  303  KG  304

157) wcaA in NC_009659


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (901),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 225/302 (75%), Gaps = 0/302 (0%)

Query  19   KLTVVVPLFNEESVLPLFHARLESVLESIRHDWEIIYVDDGSTDQSPLILQQIKAASARV  78
            K+++VVP+FNEE  +P+F   +    E    + EI++++DGS D +  I++ +  + + V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  79   GVARFTRNFGKEEAMSAGLGLARGDAVIIIDADLQDPPELIPAMLDAWLAGADIVNMRRL  138
                FTRNFGKE A+ AGL+ A GDAVI ID DLQDP E+IP +++ W AGA++V  +R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  139  QRSGESWFKKATAHAFYRVINRLSEVPVPEDVGDFRLLSRRAVDALNLLEERNRFMKGLF  198
            +RS ++++K+ TA+ FY++ N++S   + E+VGDFRL+SR  V+ ++LL ERN FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  199  AWIGYRNVTLDYNRDARVAGKSKWQYWRLWNFALEGITGFSVAPLKIATYLGSACAGITF  258
            +W+G +   ++Y R  RVAG SK + W+LWN+ALEGIT+FS  PL++ TY+G   A+I+F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  259  IYAAYFFLKTLLVGESVKGFPTLIVTVMILGGLQLMAIGIIGEYLGRLFIESKRRPLYLL  318
            +Y+A  ++ TL+ G++V+G+P+L+V++++LGG+QL++IG++GEY+GR+++E+K RP Y+L
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  319  EE  320
              
Sbjct  302  KK  303

158) CYB_1435 in NC_007776


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (899),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 152/304 (50%), Positives = 220/304 (73%), Gaps = 4/304 (1%)

Query  2    VELSVVVPCKNEADNLEHLFERLR--QTLDPLGIPYEIICVNDGSQDDTLEKLIAFHHQD  59
            + +S+VVP  NE + +  ++  +R  Q L P  +  EI+ +NDGS+D T   + A+   D
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  60   PRIKVVNLSRCFGKEIALTAGLDHASGNAVVPIDADLQDPPELIPEMLQQWRQGYQVVYA  119
            P +  ++++R FGKE AL AGLDHASG+AV+PID DLQDP E+IP+++++W+ G ++V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  120  VRRSRQGESWLKRFTANGFYWLIDQLSQVRIPRNTGDFRLLDRQVVEAVKQLRERTRFMK  179
             R  R  +++LKR TA+ FY L +++S  +I  N GDFRL+ R+VVE +K L ER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  180  GIFAWVGYRQTAIFYDRAPRFRGKTQWNYWRLWNLAIEGITSFSSWPLRVWSYIGLAISV  239
            GI++WVG +   + Y RA R  G ++ N W+LWNLA+EGITSFS+ PLRVW+YIGL ++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  240  PAFLYGLFLIIRTLLFGSDVPGYASLAVMILFLGGIQLISLGVIGEYLGRVFEEVKGRPL  299
             +FLYG  +II TL+FG+ V GY+SL V ILFLGG+QLI++GV+GEY+GR++ E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  300  YLVD  303
            Y++ 
Sbjct  299  YILK  302

159) Acife_2041 in NC_015942


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (901),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 141/305 (47%), Positives = 222/305 (73%), Gaps = 0/305 (0%)

Query  1    MTVSIIIPCHNESGNLGTLYTRIRAVMEQTGESWEMICVNDGSSDDTLLQLIALHSQDQR  60
            M +S+++P  NE   +  +Y  +R   E      E++ +NDGS D T   + AL   D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VKIIDLSRNFGKEAALTAGLDATLSDAAIPLDADLQDPPELIPELLAQWREGFDVVNAVR  120
            V  + ++RNFGKE+AL AGLD + +DA IP+D DLQDP E+IP+L+ +W+ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  LSRTGESWLKRASAHVFYRIVNRMSEVEIPPDTGDFRLLSRPVLDALQALPERRRFMKGL  180
              R+ +++LKR +A+ FY++ N++S   I  + GDFRL+SR V++ ++ LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  FAWVGFRRTNIYYHRAPRHSGKTTWNYWQLWNFAVEGITSFSQVPLQLAAYLGFLVSLLA  240
            ++WVG +   + Y RA R +G +  N W+LWN+A+EGITSFS  PL++ +Y+G++V+ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYAIWLIISTIVYGNPVKGYPSIMVTLLFLSGVQLMALGVIGEYLGRIYEESKQRPVYL  300
            FLY+ W+II T+V+GNPV+GYPS++V++LFL+GVQL+++GV+GEY+GRIY E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VKQAW  305
            +K+++
Sbjct  301  LKKGR  305

160) HEAR0529 in NC_009138


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (900),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 226/303 (75%), Gaps = 4/303 (1%)

Query  19   TLTVIVPVFNEESVLPIFHDRLERALANIN--ETWEVIYIDDGSNDNSYAILQNLKVLST  76
             ++++VPVFNEE  +P+F   + R + +++  E  E+++I+DGS+D + +I++ L V   
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEV-EIVFINDGSKDATESIINALAVSDP  59

Query  77   NVGIARFARNFGKEAAMSAGLNLAAGEAAVVIDSDLQDPPELIPSMLDAWHQGSDIVNMR  136
             V    F+RNFGKE+A+ AGL+ A+G+A + ID DLQDP E+IP +++ W+ G+++V  +
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  137  RRQRKGESWLKKITAHLFYRIINRLSEVPVPEDVGDFRLLSRRAINALNLLEERNRFMKG  196
            R +R  +++LK+ TA+ FY++ N++S   + E+VGDFRL+SR  ++ ++LL ERN FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  197  LFAWIGYKNVTLDYDREARAAGETKWRYWRLWNFALEGITGFTVAPLKIATYLGSICSGV  256
            +++W+G +   ++Y R  R AG +K   W+LWN+ALEGIT+F+  PL++ TY+G + +++
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  257  TIIYAVYFLSKTLMVGEPVKGFPTLIVTVLILGGLQLMAIGVIGEYLGRLFIESKRRPLY  316
            +++Y+   +  TL+ G+PV+G+P+L+V++L+LGG+QL++IGV+GEY+GR+++E+K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  317  LLD  319
            +L 
Sbjct  300  ILK  302

161) BP1026B_II2348 in NC_017832


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (899),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  +P V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWLGNPVPGYASLISVMLFiggielvgigvvgeyigriyyESKERPIYLV  309
            LYG+ ++  TL +GNPV GY+SL+  +LF+GG++L+GIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

162) BURPS1106A_A2949 in NC_009078


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (899),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  +P V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWLGNPVPGYASLISVMLFiggielvgigvvgeyigriyyESKERPIYLV  309
            LYG+ ++  TL +GNPV GY+SL+  +LF+GG++L+GIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

163) BURPS1710b_A1303 in NC_007435


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (899),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  +P V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWLGNPVPGYASLISVMLFiggielvgigvvgeyigriyyESKERPIYLV  309
            LYG+ ++  TL +GNPV GY+SL+  +LF+GG++L+GIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

164) BURPS668_A3075 in NC_009075


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (899),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  +P V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWLGNPVPGYASLISVMLFiggielvgigvvgeyigriyyESKERPIYLV  309
            LYG+ ++  TL +GNPV GY+SL+  +LF+GG++L+GIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

165) BPC006_II2901 in NC_018529


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (899),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  +P V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWLGNPVPGYASLISVMLFiggielvgigvvgeyigriyyESKERPIYLV  309
            LYG+ ++  TL +GNPV GY+SL+  +LF+GG++L+GIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

166) Mic7113_0490 in NC_019738


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (898),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 146/304 (49%), Positives = 219/304 (73%), Gaps = 0/304 (0%)

Query  8    VELSVVIPLYNEELNIDYLFERLRSVLIHLNMTYEIVCVNDGSRDNTLSCLIEHHYQDPR  67
            + +S+V+P++NEE  I  ++  +R          EIV +NDGS+D T S +      DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  68   IKVVNLSRNYGKEIALSAGLDHATGDAVIPIDADLQDPPELIEELVAKWREGYDVVYATR  127
            +  ++++RN+GKE AL AGLDHA+GDAVIPID DLQDP E+I +L+ KW+ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  128  RSREGESWLKRFTANVFYRVIDSISRVPIPRDTGDFRLLDRRVVEAIQQLPERNRFMKGL  187
              R  +++LKR TA+ FY++ + IS   I  + GDFRL+ R VVE I+ LPERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  188  FAWVGFKQTSVLFDRPSRHKGETKWNYWRLWNFALDGITSFSLIPLKVWSYIGLLVAIPS  247
            ++WVG +   V + R+ R  G +K N W+LWN+AL+GITSFS +PL+VW+YIGL+VA  S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  248  FFYASFLVLRTILFGIDLPGYVSIMVAVLFLGGVQLVSLGVIGEYLARVYEEVKGRPLYL  307
            F+Y++ +++ T++FG  + GY S++V++LFLGGVQL+++GV+GEY++R+Y E K+RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  308  VRET  311
            ++  
Sbjct  301  LKKG  304

167) Rpic_0600 in NC_010682


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  241 bits (898),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 172/301 (58%), Positives = 230/301 (77%), Gaps = 1/301 (0%)

Query  10   LSLVVPFYNEGEALESFFARVVPILESVEFMQFEIVCVNDGSKDDTLQKLIAVSRMDERV  69
            +SLVVP +NE EA+  F+ + V  ++ +   + EIV +NDGSKD T   + A++  D  V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGIDEALGDAVIPIDADLQDPPELIPTLVAHWQKGAEVVLAQRA  129
              + +TRNFGKE+AL AG+D+A GDAVIPID DLQDP E+IP L+  WQ GAE+VLA+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  SRACDTFLKRVTAAAYYRVHNTLSDLKLPENVGDFRLMDRAVVNALKQLPERHRFMKGLF  189
             R+ D  LKR TA  +Y++HN +S  K+ ENVGDFRLM R VV+ +K LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGFNTVIVPYEREARSAGQSKFSGWRLWNFALEGITSFSTWPLRSWTYIGLAIASLAF  249
            +WVG +T +V Y R  R AG SKF+GW+LWN+ALEGITSFST PLR WTYIGL +AS++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGSYIIARTMVLGVDVPGYAsllslllffgglqliglgvvgEYIGRIYDEAKGRPIYLV  309
            +YG+ +I  T+V+G  V GY+SLL  +LF+GG+QLIG+GV+GEYIGRIY E+K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  K  310
            K
Sbjct  302  K  302

168) cce_3958 in NC_010546


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  240 bits (897),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 147/304 (49%), Positives = 225/304 (75%), Gaps = 4/304 (1%)

Query  8    VEISIIVPCYNEEEGLDRLFE--RLFTVLNHLNLSYEIVCIDDGSRDRTLEGLIDYHRRY  65
            + IS++VP +NEEE++  ++   R F  L+  ++  EIV I+DGS+D T   +       
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  66   SAIKVISLSRNFGKDIALTAGLENAQGQAIIPIDADLQDPPELIEQLIEKWRQGYDVVYG  125
            + +  +S++RNFGK+ AL AGL++A G+A+IPID DLQDP E+I +LIEKW+ G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  126  KRRSRQGESWVKRTTANAFYriisrissvpiprDTGDFRLLDRRVVDAIKTMPERTRFMK  185
            KR  R  ++++KR TA+ FY++ ++IS+  I  + GDFRL+ R VV+ IK +PER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWVGFKQTYILYDRPNRLQGTTKWNYWKLWNFALDGITSFSLVPLKVWSYLGLFLSV  245
            G+++WVG +   + Y R++R+ G +K N WKLWN+AL+GITSFS  PL+VW+Y+GLF++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  LAFTYGSFLIIRTIILGIDVPGYASLMVTMLFIGGVQLITLGILGEYLGRIYEETKQRPL  305
            ++F YG+ +II T+++G  V GY+SL+V++LF+GGVQLI +G+LGEY+GRIY ETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLIR  309
            Y+++
Sbjct  299  YILK  302

169) Bamb_6284 in NC_008392


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  240 bits (897),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 171/302 (57%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   VSLVVPFYNEGEAVERFFDVVIPLMAGLDAIRFEIVCVNDGSRDDTLERLIRISMSDRRV  69
            +SLVVP +NE EA+  F+  V  +   L +   EIV +NDGS+D T   +  +++SD  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMLEHWRDGVEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIP+D DLQDP  +IP ++E W+ G E+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDSFAKRTAASIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRSLPERHRFMKGLF  189
            +R+ D+  KR +A  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIIEYQREARSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALSF  249
            +WVG +T ++EY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A++SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGAFIVGRTLLFGNPVLGYASLLSVTLFiggieligigvvgeyigriyDESKQRPVYLI  309
            LYGA ++  TL+FGNPV GY+SLL   LF+GG++LIGIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

170) BamMC406_5988 in NC_010557


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  240 bits (896),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 171/302 (57%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   VSLVVPFYNEGEAVERFFDVVIPLMAGLDAIRFEIVCVNDGSRDDTLERLIRISMSDRRV  69
            +SLVVP +NE EA+  F+  V  +   L +   EIV +NDGS+D T   +  +++SD  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMLEHWRDGVEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIP+D DLQDP  +IP ++E W+ G E+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDSFAKRTAASIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRSLPERHRFMKGLF  189
            +R+ D+  KR +A  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIIEYQREARSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALSF  249
            +WVG +T ++EY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A++SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGAFIVGRTLLFGNPVLGYASLLSVTLFiggieligigvvgeyigriyDESKQRPVYLI  309
            LYGA ++  TL+FGNPV GY+SLL   LF+GG++LIGIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

171) BDL_5651 in NC_021877


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  239 bits (892),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 230/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  +P V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALCSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ +  LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWLGNPVPGYASLISVMLFiggielvgigvvgeyigriyyESKERPIYLV  309
            LYG+ ++  TL +GNPV GY+SL+  +LF+GG++L+GIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

172) BTI_4901 in NC_021174


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  239 bits (893),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 169/302 (56%), Positives = 230/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVVPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAKDPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  DP V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWREGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWMGNPVPGYASLISVMLFiggieligigvvgeyigriyYESKERPIYLV  309
            LYG+ ++  TL  GNPV GY+SL+  +LF+GG++LIGIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

173) BPSS2182 in NC_006351


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  239 bits (892),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 166/302 (55%), Positives = 230/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  +P V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWLGNQVPGYASLISVMLFiggielvgigvvgeyigriyyESKERPIYLV  309
            LYG+ ++  TL +GN V GY+SL+  +LF+GG++L+GIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

174) Bcen_5508 in NC_008062


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  239 bits (890),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 232/302 (77%), Gaps = 1/302 (0%)

Query  10   VSLVVPFYNEGEAVERFFDVVIPLLSAIDAIRFEIVCVNDGSRDDTLERLVRIGAAERRV  69
            +SLVVP +NE EA+  F+  V  +   + +   EIV +NDGS+D T   +  ++ ++  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIP+D DLQDP  +IP +IE W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDSFAKRTAAALYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFMKGLF  189
            +R+ D+  KR +A  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYKTVIVEYQRDPRSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIG+ +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAFIILRTLLFGNPVLGYASLISVTLFiggieligigvvgeyvgriyDESKQRPVYLI  309
            +YGA +I+ TL+FGNPV GY+SL+   LF+GG++LIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

175) Bcen2424_5872 in NC_008544


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  239 bits (890),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 232/302 (77%), Gaps = 1/302 (0%)

Query  10   VSLVVPFYNEGEAVERFFDVVIPLLSAIDAIRFEIVCVNDGSRDDTLERLVRIGAAERRV  69
            +SLVVP +NE EA+  F+  V  +   + +   EIV +NDGS+D T   +  ++ ++  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIP+D DLQDP  +IP +IE W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDSFAKRTAAALYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFMKGLF  189
            +R+ D+  KR +A  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYKTVIVEYQRDPRSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIG+ +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAFIILRTLLFGNPVLGYASLISVTLFiggieligigvvgeyvgriyDESKQRPVYLI  309
            +YGA +I+ TL+FGNPV GY+SL+   LF+GG++LIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

176) Bcenmc03_6381 in NC_010512


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  239 bits (891),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 167/302 (56%), Positives = 232/302 (77%), Gaps = 1/302 (0%)

Query  10   VSLVVPFYNEGEAVERFFDVVIPLLSAIDAIRFEIVCVNDGSRDDTLERLVRIGAAERRV  69
            +SLVVP +NE EA+  F+  V  +   + +   EIV +NDGS+D T   +  ++ ++  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIP+D DLQDP  +IP +IE W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDSFAKRTAAALYYRVHNVLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFMKGLF  189
            +R+ D+  KR +A  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYKTVIVEYQRDPRSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIG+ +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGAFIILRTLLFGNPVLGYASLISVTLFiggieligigvvgeyvgriyDESKQRPVYLI  309
            +YGA +I+ TL+FGNPV GY+SL+   LF+GG++LIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

177) GbCGDNIH1_0717 in NC_008343


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  239 bits (891),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 140/300 (47%), Positives = 215/300 (72%), Gaps = 0/300 (0%)

Query  23   SIVVPCYNEQDGLEMFHTRLASVMDGMGESWEVVYVNDGSRDRTLDVMQTLRRADPRISV  82
            S+VVP +NE++++ +F   +    +      E+V++NDGS+D T  ++++L  +DP +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  83   VGLSRNFGKEIATTAGLDHARGQAVIVTDADLQDPPELIPELVAQWRQGFDMVYAQRRVR  142
            ++++RNFGKE A  AGLDHA G+AVI  D DLQDP E+IP+L+ +W+ G +MV A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  143  EGETWLKKATANAFYNLMTRLGDVSLPPNAGDFRLMSRRAVDALLRLREQHRFMKGLFAW  202
              + +LK+ TA+ FY+L  +++   +  N GDFRLMSR  V+ +  L E++ FMKG+++W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  203  IGYPSVAVQYDRAPRAVGESKWSYWKLWNLALEGITGFTVVPLKLATYLGILVALFAVLY  262
            +G  +  V+Y RA R  G SK + WKLWNLALEGIT+F+  PL++ TY+G++VA ++ LY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  263  GGNIVLSKLFFGNPVPGYPSLMAVVLFLGGVQLMTLGVIGEYLGRVFNETKRRPLYFVER  322
            G+ +++  L FGNPV GYPSL+  +LFLGGVQL+ +GV+GEY+GR++ ETK RP Y++ +
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

178) gtrB in NC_016010


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 131/305 (43%), Positives = 222/305 (73%), Gaps = 1/305 (0%)

Query  15   RLTVLIAAFNEETSIPLLHPRLCAVLAQLPGLQTHVLYVDDGSTDGTWEVLHALTEADAQ  74
            +++++++ FNEE +IP++   +   + +L   + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   VSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTR  134
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  VIREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  194
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPLRAATYLGLLTAVLA  254
            ++WVG +   + Y R  R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FLFGAWVVIKAALMGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYL  314
            FL+GAW++I + + G+PV G P+L+  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  VDTHR  319
            +   R
Sbjct  301  LKKGR  305

179) CC_2889 in NC_002696


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  238 bits (887),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 145/304 (48%), Positives = 216/304 (72%), Gaps = 4/304 (1%)

Query  23   TLSIVAPCFNEQEVLDLFFDRIDA--EMARLGVAYEVVCVNDGSRDHTLTVLLRRHQRDP  80
             +S+V P FNE+E + +F+  +    E+    V  E+V +NDGS+D T +++      DP
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDP  59

Query  81   RIKVINLARNFGKETALSAGLDAATGDMIVPIDCDLQDPPELIGQFLEAWEAGADVAYGV  140
             +  ++++RNFGKE AL AGLD A+GD ++PID DLQDP E+I +++E W+AGA++  + 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  141  RVDRTSDGLLKRATAQGFYRAFNKLSDVDLPYNAGDYRLMDRRVVEVLKQLPERNRFMKG  200
            R DR++DG LKR TA+ FY+  NK+S   +  N GD+RLM R VVE +K LPERN FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  201  LFAWVGFNQVAVPYVRPERAAGTTSFRYWKLWNFALDGITSFSSVPIRIWSYVGLIAGVL  260
            +++WVG +   V YVR+ER AG + F  WKLWN+AL+GITSFS+ P+R+W+Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  261  ACGVAGMIVVRTLLFGRDVPGYPSLMVVILMGFGLQMLAIGSLGEYVARIYQEVKNRPLY  320
            +   ++ +++ TL+FG  V GYPSL+V IL   G+Q+++IG LGEY++RIY E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  321  VVMD  324
            ++  
Sbjct  300  ILKK  303

180) CCNA_02983 in NC_011916


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  238 bits (887),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 145/304 (48%), Positives = 216/304 (72%), Gaps = 4/304 (1%)

Query  23   TLSIVAPCFNEQEVLDLFFDRIDA--EMARLGVAYEVVCVNDGSRDHTLTVLLRRHQRDP  80
             +S+V P FNE+E + +F+  +    E+    V  E+V +NDGS+D T +++      DP
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDP  59

Query  81   RIKVINLARNFGKETALSAGLDAATGDMIVPIDCDLQDPPELIGQFLEAWEAGADVAYGV  140
             +  ++++RNFGKE AL AGLD A+GD ++PID DLQDP E+I +++E W+AGA++  + 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  141  RVDRTSDGLLKRATAQGFYRAFNKLSDVDLPYNAGDYRLMDRRVVEVLKQLPERNRFMKG  200
            R DR++DG LKR TA+ FY+  NK+S   +  N GD+RLM R VVE +K LPERN FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  201  LFAWVGFNQVAVPYVRPERAAGTTSFRYWKLWNFALDGITSFSSVPIRIWSYVGLIAGVL  260
            +++WVG +   V YVR+ER AG + F  WKLWN+AL+GITSFS+ P+R+W+Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  261  ACGVAGMIVVRTLLFGRDVPGYPSLMVVILMGFGLQMLAIGSLGEYVARIYQEVKNRPLY  320
            +   ++ +++ TL+FG  V GYPSL+V IL   G+Q+++IG LGEY++RIY E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  321  VVMD  324
            ++  
Sbjct  300  ILKK  303

181) gtrB in NC_007508


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  238 bits (887),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 131/305 (43%), Positives = 221/305 (73%), Gaps = 1/305 (0%)

Query  15   RLTVLIAAFNEETSIPLLHPRLCAVLAQLPGLQTHVLYVDDGSTDGTWEVLHALTEADAQ  74
            +++++++ FNEE +IP++   +   + +L   + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   VSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTR  134
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  VIREGENWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  194
              R  + +LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPLRAATYLGLLTAVLA  254
            ++WVG +   + Y R  R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FLFGAWVVIKAALMGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYL  314
            FL+GAW++I + + G+PV G P+L+  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  VDTHR  319
            +   R
Sbjct  301  LKKGR  305

182) Bcep18194_C7210 in NC_007509


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  237 bits (884),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 170/302 (57%), Positives = 231/302 (77%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEGEAVEHFFDVVIPLMTSIDAIRFEIVCVNDGSRDDTLERLIRISTGERRV  69
            ISLVVP +NE EA+  F+  V  +   + +   EIV +NDGS+D T   +  ++ ++  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEALGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A GDAVIP+D DLQDP  +IP +IE W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDSFAKRTAAAIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFMKGLF  189
            +R+ D+  KR +A  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQRDARSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIG+ +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGAFIIFRTLLFGNPVLGYASLISVTLFiggieligigvvgeyigriyDESKQRPVYLI  309
            LYGA +I+ TL+FGNPV GY+SL+   LF+GG++LIGIGV+GEYIGRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

183) BCAS0295 in NC_011002


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  237 bits (884),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 165/302 (55%), Positives = 232/302 (77%), Gaps = 1/302 (0%)

Query  10   VSLVVPFYNEGEAVERFFDVVIPLLSAIDAIRFEIVCVNDGSRDDTLERLVRIGAAERRV  69
            +SLVVP +NE EA+  F+  V  +   + +   EIV +NDGS+D T   +  ++ ++  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMIDHWRDGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIP+D DLQDP  +IP +I+ W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDSFAKRTAAAIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFMKGLF  189
            +R+ D+  KR +A  +Y++HN +S  K+ ENVGDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYKTVIVEYQRDPRSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIG+ +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGSFIILRTLLFGNPVLGYASLISVTLFiggieligigvvgeyvgriyDESKQRPVYLI  309
            +YG+ +I+ TL+FGNPV GY+SL+   LF+GG++LIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

184) Cyan8802_4500 in NC_013161


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  237 bits (883),  Expect = 7e-64, Method: Compositional matrix adjust.
 Identities = 145/304 (48%), Positives = 216/304 (72%), Gaps = 4/304 (1%)

Query  8    MEISIIVPCYNESPNIDYLFE--RLFSVLNPLNLPYEIICVDDGSRDDTLIKLIDYHHRY  65
            M IS++VP +NE   I  ++   R F  L+P ++  EI+ ++DGS+D T   +       
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  66   REIKVIGLSRNFGKEIALTAGIDYAQGNAVIPIDADLQDPPELISELIAKWQEGYEVVYA  125
              +  ++++RNFGKE AL AG+D A G+AVIPID DLQDP E+I++LI KWQ G E+V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  126  KRRSRQGESFLKRFTADVFYRVISNMSNVSIPRDTGDFRLLDRRVVNALKQIPERNRFMK  185
            KR  R  ++ LKR TA+ FY++ +++S   I  + GDFRL+ R VV+ +K +PERN FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWVGFKQTAILYDRLPRYQGKTKWNYWKLWNFAIDGITSFSMVPLKVWSYLGVILSF  245
            G+++WVG +   + Y R  R  G +K N WKLWN+A++GITSFS  PL+VW+Y+G++++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  LAFLYGIFLIVRTLILGIDVPGYASLMVTTLFLGGIQLISLGVIGEYLGRVYEEVKQRPL  305
            ++FLYG  +I+ TL++G  V GY+SL+V+ LFLGG+QLI++GV+GEY+GR+Y E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLVR  309
            Y+++
Sbjct  299  YILK  302

185) C380_03125 in NC_018708


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  236 bits (880),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 158/305 (52%), Positives = 219/305 (72%), Gaps = 2/305 (0%)

Query  5    KKISLVAPFYNEESNVRPFLQQVHAALAPVLGTYDLEIICVNDGSRDGTLEALREAREHH  64
             KISLV P +NEE  +  F + V+      L  Y++EI+ +NDGS+D+T   +      +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQE--LKPYEVEIVFINDGSKDATESIINALAVSD  58

Query  65   PQVKVIDFSRNFGKEAAITAGLDFATGDAVIPIDSDLQHPPELILEMLAHWESGFEVVLA  124
            P V  + F+RNFGKE+A+ AGLD A+GDAVIPID DLQ+P E+I +++  W++G E+VLA
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  125  RRTSRETDQALQRLTARAFYEVSRYISHIEIPADVGDYRLMDRKVVDALKALQEKCRFMK  184
            +R+ R TD  L+R TA  FY +   IS   I  +VGD+RLM R VV+ +K L E+  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  185  GLFAWVGFRTTVVNYRVVPRVHGKSSFNTWKLWNFALEGITSFSTLPLRVWTYLGGLVSL  244
            G+++WVG +T VV+Y    RV G S FN WKLWN+ALEGITSFST+PLRVWTY+G +V+ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  245  GAFVYAAYLIVKTLVFGVEVPGYASLMIVILLASGVQligigilgeylgRVFTEVKNRPV  304
             +F+Y+A +I+ TLVFG  V GY+SL++ IL+ +GVQLIGIG+LGEY+GR++ E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  305  YIVRE  309
            YI++ 
Sbjct  299  YILKK  303

186) OOM_0856 in NC_017909


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  236 bits (879),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 144/303 (48%), Positives = 212/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDESESIDHLFNRLMPILEQLPTKYELVFINDGSSDNTLDLLLEKQKSIPEIAV  68
            S+++PV +E E+I  +++ +  + E  P   E+VFINDGS D T  ++     S P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCKGNAAISIDADLQDPPELILEMVEHWLNGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ +  G+A I+ID DLQDP E+I +++E W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYTVMNKISETKLTPNAGDYRLLNRAAINAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FY + NKIS  K+  N GD+RL++R  ++ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERVAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGVFVAFMSFVY  248
            +G +  +V   R ERVAG +K N WKL +++++GITSFS  PL +W+YIG+FVA +SF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIIIKSLVFGADVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYILRE  308
            G+ +II +LVFG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YIL+ 
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

187) Fphi_1285 in NC_010336


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  236 bits (880),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 144/303 (48%), Positives = 212/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDESEGIDHLFNRLMPILEQLPTKYELVFINDGSNDNTLDLLLEKQKSIPEIAV  68
            S+++PV +E E+I  +++ +  + E  P   E+VFINDGS+D T  ++     S P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCKGDAAISIDADLQDPPELILEMVEHWLNGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ +  GDA I+ID DLQDP E+I +++E W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYTVMNKISETKLTPNAGDYRLLNRAAINAFLELKEKVRFNKGLLTW  188
             TD   K+ TA  FY + NKIS  K+  N GD+RL++R  ++ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERVAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGVFVAFMSFLY  248
            +G +  +V   R ERVAG +K N WKL +++++GITSFS  PL +W+YIG+FVA +SFLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSFFILKSLVFGIDVPGYPSLITFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIVRE  308
            G+  I+ +LVFG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI++ 
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

188) gtrB1 in NC_009659


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  236 bits (881),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 136/303 (45%), Positives = 225/303 (75%), Gaps = 2/303 (0%)

Query  19   KLSVIVPLFNEESVLRIFHERLEMALSGLKH-EWEVIYVDDGSTDSSHNILQQLRVQSFR  77
            K+S++VP+FNEE  + +F   +   +  LK  E E+++++DGS D++++I++ L V    
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  78   VGVARFTRNFGKEEAMSAGLRLATGDAAVIIDSDLQDPPELIPSMIEAWLAGADIVNMRR  137
            V    FTRNFGKE A+ AGL  A+GDA + ID DLQDP E+IP +IE W AGA++V  +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  138  RHRSGESWVKKVTAHAFYRVINRLSDVPVPADVGDFRLLSRRAINALNLLQERNRFMKGL  197
             +RS ++++K+ TA+ FY++ N++S   +  +VGDFRL+SR  ++ ++LL ERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  198  FAWIGYKHVTLDYNRAARAAGKTKWRYWRLWNFALEGITGFSVAPLKIATYLGSVCAGMA  257
            ++W+G +   ++Y RA R AG +K   W+LWN+ALEGIT+FS  PL++ TY+G   A+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  258  FFYAMYFLLKTVLIGESVRGFPTLIVTVMILGGLQLMAIGIIGEYLGRLFIESKRRPLYL  317
            F+Y+   ++ T+++G++VRG+P+L+V++++LGG+QL++IG++GEY+GR+++E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  318  LED  320
            L  
Sbjct  301  LKK  303

189) PCC8801_4438 in NC_011726


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  235 bits (878),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 144/304 (48%), Positives = 216/304 (72%), Gaps = 4/304 (1%)

Query  8    MEISIIVPCYNESPNIDYLFE--RIFSVLNSLNLPYEIICVDDGSRDDTLIKLIDYHHRY  65
            M IS++VP +NE   I  ++   R F  L++ ++  EI+ ++DGS+D T   +       
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  66   REIKVIGLSRNFGKEIALTAGIDYAQGNAVIPIDADLQDPPELISELIAKWQEGYEVVYA  125
              +  ++++RNFGKE AL AG+D A G+AVIPID DLQDP E+I++LI KWQ G E+V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  126  KRRSRQGESFLKRFTADVFYRVISNMSNVSIPRDTGDFRLLDRRVVNALKQIPERNRFMK  185
            KR  R  ++ LKR TA+ FY++ +++S   I  + GDFRL+ R VV+ +K +PERN FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWVGFKQTAILYDRLPRYQGKTKWNYWKLWNFAIDGITSFSMVPLKVWSYLGVILSF  245
            G+++WVG +   + Y R  R  G +K N WKLWN+A++GITSFS  PL+VW+Y+G++++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  LAFLYGIFLIVRTLILGIDVPGYASLMVTTLFLGGIQLISLGVIGEYLGRVYEEVKQRPL  305
            ++FLYG  +I+ TL++G  V GY+SL+V+ LFLGG+QLI++GV+GEY+GR+Y E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLVR  309
            Y+++
Sbjct  299  YILK  302

190) F7308_0918 in NC_015696


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  235 bits (877),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 142/303 (47%), Positives = 213/303 (71%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDESEGIDHLFNRLMPILNQLPTNYELVFINDGSNDNTLELLLEKQKSIPEIAI  68
            S+++PV +E E+I  +++ +  + +  P + E+VFINDGS+D T  ++     S P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCKGDAAISIDADLQDPPELILEMVEHWLNGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ +  GDA I+ID DLQDP E+I +++E W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYTVMNKISETKLTPNAGDYRLLNRAAINAFLELKEKVRFNKGLLTW  188
             TD   K+ TA  FY + NKIS  K+  N GD+RL++R  ++ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERVAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGVFVAFMSFLY  248
            +G +  +V   R ERVAG +K N WKL +++++GITSFS  PL +W+YIG+FVA +SFLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSFFILKSLIFGIDVPGYPSLITFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIVRE  308
            G+  I+ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI++ 
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

191) Cyan7425_2174 in NC_011884


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  234 bits (871),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 138/303 (46%), Positives = 216/303 (72%), Gaps = 0/303 (0%)

Query  11   VDVSIVVPLYNEALNVDYLLERLESVCEQLDLSYEIVCVNDGSRDETLSYLIRYHHQNPS  70
            + +S+VVP++NE   +  +   +    E      EIV +NDGS+D T S +      +P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  71   IKVINLSRNFGKEVALTAGLDYATGQTVVPIDADLQDPPELIGEMLEKWRNGYDVVYAVR  130
            +  ++++RNFGKE AL AGLD A+G++V+PID DLQDP E+I +++EKW+ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  131  RSRQGESWLKKITADSFYRVISNMSRVAIPRNTGDFRLMDRKVVDALKQLPERSRFMKGL  190
              R  +++LK+ TA+ FY++ +++S   I  N GDFRLM R VV+ +K LPER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  191  FAWVGFEQTAIYYDRAPRYQGQTKWNYWKLWNFAIDGITSFSLAPLKVWSYIGLGLSLLA  250
            ++WVG +   + Y RA R  G +K N WKLWN+A++GITSFS  PL+VW+YIGL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  251  LFYACFLILRTLIYGVDMPGYASIMVGVLFLGGIQLITLGVIGEYLGRVYEEVKGRPLYL  310
            ++Y+  +I+ TL++G  + GY+S++V++LFLGG+QLI +GV+GEY+GR+Y E K+RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  311  VRD  313
            ++ 
Sbjct  301  LKK  303

192) B565_2988 in NC_015424


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  233 bits (867),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 154/304 (51%), Positives = 228/304 (75%), Gaps = 4/304 (1%)

Query  7    RLSLVVPVYNEEESIDAFINAIDNELAPLKD-QLEIVFVNDGSRDRTREVVEQAIARDPR  65
            ++SLVVPV+NEEE+I  F +++  E+  LK  ++EIVF+NDGS+D T  +++     DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  66   VTLVNLARNFGKEAALTAGLHQAKGDAIVPMDVDLQDPPALILEFVKLWQTGDYDTVYGI  125
            V  ++++RNFGKE+AL AGL++A GDA++P+DVDLQDP  +I +++  WQ+G  + V + 
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  126  RVDRSADTPMKRLTAGGFYRFFNALSTSTKLPENAGDFRLIDRRVVEAIKLLPERNRFMK  185
            R DRS+D  +KR TA  FY++ N +ST+ K+ EN GDFRL+ R VVE IKLLPERN FMK
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTP-KIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWAGFRAVGVPYERPARHAGETKFNYWKLWNFALDGLLSFSSWPLRVWSYVGVSVSL  245
            G+++W G ++  V Y R+ R AG +KFN WKLWN+AL+G+ SFS+ PLRVW+Y+G+ V+ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  VAFLYILKIITQVIFFGIDVPGYASLMSVVLFlggiqllslgiigEYIGRMFVEVKQRPV  305
            ++FLY   +I + + FG  V GY+SL+  +LFLGG+QL+++G++GEYIGR+++E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLIE  309
            Y++ 
Sbjct  299  YILK  302

193) RALTA_B1309 in NC_010530


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  233 bits (867),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 145/303 (48%), Positives = 221/303 (73%), Gaps = 1/303 (0%)

Query  8    SLAVVVPVYNEEAVIRQFHQRLSATLDGIEHLHAAVIYVNDGSADHTLAVLLALRQQDPR  67
             +++VVPV+NEE  I  F + +   ++ +   +  ++++NDGS D T +++ AL   DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  68   IAIVNLSRNFGKEIALSAGLDFadadavividadLQDPPELIPEFVRLWQAGNDVVYGQR  127
            +  ++++RNFGKE AL AGLD A +DAVI ID DLQDP E+IP+++  WQAG ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  128  VSRRGETRLKKATAYLFYRVIQSLSRVHIPEDTGDFRLLSRRAVQALRSLREQHRYMKGL  187
              R  + RLK+ TA  FY++ + +S   I E+ GDFRL+SR  V+ ++ L E++ +MKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  188  FSWIGYSQVALRYERAPRSAGTSKFNYPRLWAFALEGITSFSITPLKIATYVGLLIAGLS  247
            +SW+G     + Y RA R AG SKFN  +LW +ALEGITSFS  PL++ TY+GL++A++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  248  FMGAAFVFYKALVYGDPVRGYPSLMVTNLFLSGVQLIGIGVLGEYLGRMFNESKNRPLYF  307
            F+ +A ++  +LV+G+PVRGYPSL+V+ LFL+GVQLIGIGVLGEY+GR++ E+K+RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  308  VER  310
            + +
Sbjct  301  LKK  303

194) AHA_1218 in NC_008570


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  232 bits (864),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 153/304 (51%), Positives = 228/304 (75%), Gaps = 4/304 (1%)

Query  7    RLSLIVPVYNEEESIDAFINAIDNELAPLKD-QLEIVFVNDGSRDRTREVVEQAIVRDPR  65
            ++SL+VPV+NEEE+I  F +++  E+  LK  ++EIVF+NDGS+D T  +++   V DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  66   VTLVNLARNFGKEAAMTAGLHHAKGDAVVPMDVDLQDPPALILEFVKLWQTGDYDTVYGI  125
            V  ++++RNFGKE+A+ AGL+HA GDAV+P+DVDLQDP  +I +++  WQ+G  + V + 
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  126  RVDRSADTPMKRLTAGGFYRFFNALSTSTKLPENAGDFRLIDRKVVEAIKQLPERNRFMK  185
            R DRS+D  +KR TA  FY++ N +ST+ K+ EN GDFRL+ R VVE IK LPERN FMK
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTP-KIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWAGFRAIGVPYERPARHAGETKFNYWKLWNFALDGLMSFSSWPLRVWSYVGVGVSF  245
            G+++W G ++  V Y R+ R AG +KFN WKLWN+AL+G+ SFS+ PLRVW+Y+G+ V+ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  VAFLYILKIVTQVVFFGIDVPGYASLMSVVLFlggiqllslgiigEYIGRMFVEVKQRPV  305
            ++FLY   ++ + + FG  V GY+SL+  +LFLGG+QL+++G++GEYIGR+++E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLIE  309
            Y++ 
Sbjct  299  YILK  302

195) Fraau_2799 in NC_017033


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  231 bits (860),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 136/304 (45%), Positives = 220/304 (73%), Gaps = 2/304 (0%)

Query  1    MLTIVAPLYNESAVLDSFCQRLLPVLDQLQE-QTRVLFVDDGSQDGSWQLVMRLAASDSR  59
             +++V P++NE   +  F  + +  +++L+  +  ++F++DGS+D++  ++  LA SD+ 
Sbjct  2    KISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  60   IGGLRLSRNFGKEAALTAGLDHVRQGAAIVIDTDLQDPPELIPQLVEQWAQGYDVVYATR  119
            +  L ++RNFGKE+AL AGLDH   +A I ID DLQDP E+IP+L+E+W  G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  120  RNRLGETWLKKTTALGFYRVMARLSDLAVPQNTGDFRLLSRRSLDALQQLRERQRYMKGL  179
             +R  + +LK+ TA  FY++  ++S   + +N GDFRL+SR  ++ ++ L ER+ +MKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  180  FSWIGFRQTAVQFDRDPRIGGRSKWNYWRLLKLAVEGITSFSTAPLQLATWVGLGSAALA  239
            +SW+G +   V++ R  R++G SK N W+L +LA+EGITSFST PL++ T +GL  A+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  240  FVYGSWVLGRALLFGDVVRGYPSLMVVILFLGGVQLLALGVIGEYLGRNYAETKQRPLYF  299
            F+YG+W++  +L+FG+ VRGYPSL+V ILFLGGVQL+++GV+GEY+GR Y ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  300  VDAS  303
            +  +
Sbjct  301  LKKG  304

196) BTH_II2260 in NC_007650


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  231 bits (860),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 145/264 (55%), Positives = 196/264 (75%), Gaps = 1/264 (0%)

Query  10   ISLVVPFYNEGDAVTRFFAEVVPLMEAIESIRFEIVCVNDGSRDDTLEKLVAVGAQDPRV  69
            ISLVVP +NE +A+  F+  V  + + + +   EIV +NDGS+D T   + A++  DP V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIGHWREGAEVVAAKRS  129
              + +TRNFGKE+AL AGLD+A+GDAVIPID DLQDP  +IP +I  W+ GAE+V AKRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPERRRFMKGLF  189
            +R+ D   KR +A  +Y++HN +S  K+  NVGDFRLM R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGLGIAALAF  249
            +WVG +T +VEY R  R AG SKF+GWKLWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  LYGGFIVARTLWMGNAVPGYASLI  273
            LYG+ ++  TL  GN+V GY+SL+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLL  265

197) AHML_06460 in NC_021290


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  231 bits (860),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 152/304 (50%), Positives = 227/304 (75%), Gaps = 4/304 (1%)

Query  7    RLSLIVPVYNEEESIDAFINAIDNELAPLKD-QLEIVFVNDGSRDRTREVVEQAIARDPR  65
            ++SL+VPV+NEEE+I  F +++  E+  LK  ++EIVF+NDGS+D T  +++     DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  66   VTLVNLARNFGKEAAMTAGLHHAKGDAVVPMDVDLQDPPALILEFVKLWQTGDYDTVYGI  125
            V  ++++RNFGKE+A+ AGL+HA GDAV+P+DVDLQDP  +I +++  WQ+G  + V + 
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  126  RVDRSADTPMKRLTAGGFYRFFNALSTSTKLPENAGDFRLIDRKVVEAIKQLPERNRFMK  185
            R DRS+D  +KR TA  FY++ N +ST+ K+ EN GDFRL+ R VVE IK LPERN FMK
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTP-KIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWAGFRAVGVPYERPARHAGETKFNYWKLWNFALDGLMSFSSWPLRVWSYVGVGVSF  245
            G+++W G ++  V Y R+ R AG +KFN WKLWN+AL+G+ SFS+ PLRVW+Y+G+ V+ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  VAFLYILKIVTQVVFFGIDVPGYASLMSVVLFlggiqllslgiigEYIGRMFVEVKQRPV  305
            ++FLY   ++ + + FG  V GY+SL+  +LFLGG+QL+++G++GEYIGR+++E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLIE  309
            Y++ 
Sbjct  299  YILK  302

198) SY1_17080 in NC_021038


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  230 bits (858),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 162/300 (54%), Positives = 226/300 (76%), Gaps = 0/300 (0%)

Query  2    ISLLCPCYNEEAVLPLFFERITSVMEGIGQDFEIVCVNDGSRDGTLDLLREQAEADERVK  61
            ISL+ P +NEE  +P+F+  +    E    + EIV +NDGS+D+T  ++   A +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   VVDLSRNFGKEAALTAALDHSTGDAVVPIDADLQDPPELIGVMLEKWREGYEVVLAHRSN  121
             + ++RNFGKE+AL A+LDH++GDAV+PID DLQDP E+I  ++EKW+ G E+VLA RS+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  122  RSSDSWLKRVTARMFYKVHNRISQPELPENVGDFRLMDRRVVDALGGLRETHRFMKGLFA  181
            RS+D++LKR TA  FYK+HN+IS P + ENVGDFRLM R VV+ +  L E + FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  182  WVGFKTCIVDYVRKPRAAGKTKFNGWRLWKLAVEGITSFSTFPLTVWFYLGSLTAFGAFA  241
            WVG +T +V+YVR  R AG +KFNGW+LW+LA+EGITSFSTFPL VW Y+G + A  +F 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  242  YGLYIVLRTLIWGIEVPGYASllclilffgglqllgigilgeylgRAYMESKKRPVYVVR  301
            YG  +++ TL+ G  V GY+SLL  ILF+GG+QL+GIG+LGEY+GR Y+E+K RP Y+++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

199) Swit_2876 in NC_009511


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  230 bits (859),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 153/298 (52%), Positives = 215/298 (73%), Gaps = 5/298 (1%)

Query  24   EEDAIVPFVTRMTRVLDALRDPQGAPIGWEIVFIDDGSTDRTMAAILVAHDADRRVAALS  83
            +E+  +P   +  R ++ L+  +      EIVFI+DGS D T + I     +D  V +LS
Sbjct  11   NEEEAIPVFYKTVREFQELKPYEV-----EIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  84   LSRNFGKEAALSAGLDHARGAVVVPIDVDMQDPPEVIGAMIDKWRDGYEVVYGVRRNRLT  143
            ++RNFGKE+AL AGLDHA G  V+PIDVD+QDP EVI  +I+KW+ G E+V + R +R T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  144  DSLPKRLTADLYYRAHNWLSMDKIPEHAGDFRLLDRKVVEVIKRMPERNRFMKGLFAWSG  203
            D+  KR TA+ +Y+ HN +S  KI E+ GDFRL+ R VVE IK +PERN FMKG+++W G
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  204  FRQTAVEYDRAERAVGTTKFNYWKLWQLAIDGITSASTAPLRVWSyvgaviavvalvyav  263
             +   VEY RAER  G +KFN WKLW+LA++GITS ST PLRVW+Y+G  +A ++++Y+ 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  264  yigvRTLIYGADVAGYPSLMVATLFLGGVQLLSLGILGEYVGRILVETKKRPIYIVRQ  321
             + + TL++G  V GYPSL+V+ LFLGGVQL+++G+LGEY+GRI +ETK RP YI+++
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

200) XCR_3240 in NC_017271


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  230 bits (856),  Expect = 9e-62, Method: Compositional matrix adjust.
 Identities = 127/303 (42%), Positives = 219/303 (73%), Gaps = 1/303 (0%)

Query  14   RLTVVIAAFNEATSIPLLHPRLQGVLAGLSGVQTHVLYVDDGSTDDTWQVLQALTDADAQ  73
            ++++V++ FNE  +IP++   ++  +  L   + ++++++DGS D T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  74   VSAVRLSRNFGKEVAISAGLDHVQPGAVVLLDADGQDPPELIPEFVALWRAGYDNIFGTR  133
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W+AG + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  134  VFREGESWLKRAAAHAFYRVIRQLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  193
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  194  FGWVGFRQVALPYRRAPRLSGRSKFTVWRLWNFALDGITSFSTVPLRAATYLGMLTALVA  253
            ++WVG +   + Y RA R++G SKF  W+LWN+AL+GITSFST PLR  TY+G++ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  254  FGFGGWVIVKAALMGDPVPGWPTMMSIILFLGGIQLIALGMIGEYLGRLYDEAKQRPLYL  313
            F +G+W+I+ + + G+PV G P+++  ILFLGG+QLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  314  IDT  316
            +  
Sbjct  301  LKK  303

201) ASA_1210 in NC_009348


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  229 bits (854),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 152/303 (51%), Positives = 227/303 (75%), Gaps = 4/303 (1%)

Query  7    RLSLIVPVYNEEESIDAFINAIDNELAPLKD-RLEIVFVNDGSRDSTREVIERAITRDPR  65
            ++SL+VPV+NEEE+I  F +++  E+  LK   +EIVF+NDGS+D+T  +I+     DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  66   VTLVNLARNFGKEAAMTAGLHHAKGDAIVPMDVDLQDPPSLILEFVKLWQTGDYDTVYGI  125
            V  ++++RNFGKE+A+ AGL+HA GDA++P+DVDLQDP  +I +++  WQ+G  + V + 
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  126  RVDRSADTPMKRVTAGGFYRFFNALSTSTKLPENAGDFRLIDRRVVEAIKQLPERNRFMK  185
            R DRS+D  +KR TA  FY++ N +ST+ K+ EN GDFRL+ R VVE IK LPERN FMK
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTP-KIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWAGFRAVGVPYERPARHAGETKFNYWKLWNFALDGLMSFSSWPLRVWSYVGVGVSF  245
            G+++W G ++  V Y R+ R AG +KFN WKLWN+AL+G+ SFS+ PLRVW+Y+G+ V+ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  VAFLYILKIVTQVVFFGIDVPGYASLMSVVLFlggiqllslgiigEYIGRMFVEVKQRPI  305
            ++FLY   ++ + + FG  V GY+SL+  +LFLGG+QL+++G++GEYIGR+++E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLI  308
            Y++
Sbjct  299  YIL  301

202) BC1002_4794 in NC_014118


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  229 bits (853),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 165/302 (55%), Positives = 228/302 (76%), Gaps = 1/302 (0%)

Query  10   ISLVVPFYNEQDAVERFFAAVVPVLESIDGTRFEIVCINDGSSDATLDRLIAQSSRDRRI  69
            ISLVVP +NE++A+  F+ +V   ++ +     EIV INDGS DAT   + A +  D  +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   RVIDLTRNFGKEAALTAGIDEAFGDAVIPIDADLQDPPSLIPVMVEHWRAGAEVVAAKRT  129
              + +TRNFGKE+AL AG+D+A GDAVIPID DLQDP  +IP ++E W+AGAE+V AKR+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  NRLCDTFAKRTAAALYYRVHNALSEVKLPENVGDFRLIDRQVVNALRSLPERRRFMKGLF  189
            +R  D   KR +A  +Y++HN +S  K+ ENVGDFRL+ R+VV+ ++ LPER  FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGYRTVIVEYEREPRSAGHSKFSGWRLWNFALEGITSFSTVPLRSWTYIGLSIATLAF  249
            +WVG +T +VEY R  R AG SKF+GW+LWN+ALEGITSFST PLR WTYIGL +A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  VYGGFVIGRTLWSGNPVPGYASTISVMLFMggieligigvigeyvgriyyESKERPVYLV  309
            +YG+ +I  TL  GNPV GY+S +  +LF+GG++LIGIGV+GEY+GRIY E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  RR  311
            ++
Sbjct  302  KK  303

203) gtrB in NC_008601


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  229 bits (853),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 212/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGVVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG+ VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

204) FN3523_1462 in NC_017449


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  229 bits (853),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 138/303 (46%), Positives = 212/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAV  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNRISDTKLTPNAGDYRLLNRAAINAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ N+IS  K+  N GD+RL++R  ++ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGVCVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG+ VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGIDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRR  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

205) XC_1245 in NC_007086


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 127/303 (42%), Positives = 219/303 (73%), Gaps = 1/303 (0%)

Query  14   RLTVVIAAFNEATSIPLLHPRLQGVLAGLSGVQTHVLYVDDGSTDDTWQVLQALTDADAQ  73
            ++++V++ FNE  +IP++   ++  +  L   + ++++++DGS D T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  74   VSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRAGYDNIFGTR  133
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W+AG + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  134  VFREGESWLKRAAAHAFYRVIRQLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  193
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  194  FGWVGFRQVALPYRRAPRLSGRSKFTVWRLWNFALDGITSFSTVPLRAATYLGMLTALVA  253
            ++WVG +   + Y RA R++G SKF  W+LWN+AL+GITSFST PLR  TY+G++ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  254  FGFGGWVIVKAALMGDPVPGWPTMMSIILFLGGIQLIALGMIGEYLGRLYDEAKQRPLYL  313
            F +G+W+I+ + + G+PV G P+++  ILFLGG+QLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  314  IDT  316
            +  
Sbjct  301  LKK  303

206) gtrB in NC_003902


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 127/303 (42%), Positives = 219/303 (73%), Gaps = 1/303 (0%)

Query  14   RLTVVIAAFNEATSIPLLHPRLQGVLAGLSGVQTHVLYVDDGSTDDTWQVLQALTDADAQ  73
            ++++V++ FNE  +IP++   ++  +  L   + ++++++DGS D T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  74   VSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRAGYDNIFGTR  133
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W+AG + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  134  VFREGESWLKRAAAHAFYRVIRQLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  193
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  194  FGWVGFRQVALPYRRAPRLSGRSKFTVWRLWNFALDGITSFSTVPLRAATYLGMLTALVA  253
            ++WVG +   + Y RA R++G SKF  W+LWN+AL+GITSFST PLR  TY+G++ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  254  FGFGGWVIVKAALMGDPVPGWPTMMSIILFLGGIQLIALGMIGEYLGRLYDEAKQRPLYL  313
            F +G+W+I+ + + G+PV G P+++  ILFLGG+QLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  314  IDT  316
            +  
Sbjct  301  LKK  303

207) xccb100_1291 in NC_010688


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 127/303 (42%), Positives = 219/303 (73%), Gaps = 1/303 (0%)

Query  14   RLTVVIAAFNEATSIPLLHPRLQGVLAGLSGVQTHVLYVDDGSTDDTWQVLQALTDADAQ  73
            ++++V++ FNE  +IP++   ++  +  L   + ++++++DGS D T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  74   VSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRAGYDNIFGTR  133
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W+AG + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  134  VFREGESWLKRAAAHAFYRVIRQLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  193
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  194  FGWVGFRQVALPYRRAPRLSGRSKFTVWRLWNFALDGITSFSTVPLRAATYLGMLTALVA  253
            ++WVG +   + Y RA R++G SKF  W+LWN+AL+GITSFST PLR  TY+G++ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  254  FGFGGWVIVKAALMGDPVPGWPTMMSIILFLGGIQLIALGMIGEYLGRLYDEAKQRPLYL  313
            F +G+W+I+ + + G+PV G P+++  ILFLGG+QLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  314  IDT  316
            +  
Sbjct  301  LKK  303

208) CYA_2466 in NC_007775


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  228 bits (850),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 144/303 (48%), Positives = 216/303 (72%), Gaps = 4/303 (1%)

Query  9    ELSVVIPCKNEADNLEHLFERLR--LTLDPLGIPYEIICVNDGSEDDTLEKLIAFHRQDP  66
             +S+V+P  NE + +  ++  +R    L P  +  EI+ +NDGS D T   + A+   DP
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDP  59

Query  67   RIKVVNLSRGFGKEIALTAGLDYAAGRAVVPIDADLQDPPELIPEMLQQWRQGYQVVYAV  126
             +  ++++R FGKE AL AGLD A+G AV+PID DLQDP E+IP+++++W+ G ++V A 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  127  RRSRRGESWLKRLTANGFYWVIDQLSQVRIPRNTGDFRLLDRQVVDAIRQLRERTRFMKG  186
            R  R  +++LKR TA+ FY + +++S  +I  N GDFRL+ R+VV+ I+ L ER  FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  187  IFAWVGYRQVAIFYDRAPRFRGKSQWNYWRLWNLAIEGITSFSSWPLRVWSYLGLGISVL  246
            I++WVG +   + Y RA R  G S+ N W+LWNLA+EGITSFS+ PLRVW+Y+GL ++ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  247  ALLYGLFLIIRTLLFGSDVPGYASLAVMTLFLGGIQLISLGVIGEYLGRVFEEVKGRPLY  306
            ++LYG  +II TL+FG+ V GY+SL V  LFLGG+QLI++GV+GEY+GR++ E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  307  LVQ  309
            +++
Sbjct  300  ILK  302

209) CPS_1863 in NC_003910


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  228 bits (850),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 138/308 (45%), Positives = 225/308 (74%), Gaps = 2/308 (0%)

Query  14   ITLSIIVPVYNEREMLPIFHHHLAKVLSTLSEDSVEVIYVNDGSCDDSWDVMLDLNSHYA  73
            + +S++VPV+NE E +P+F   + + +  L    VE++++NDGS D +  ++  L    +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  74   NIECINLSRNFGKEAAMTAGIDNAKGQAVILLDADLQDPPELIPDMLTAWRKGFDVVNMK  133
             +  ++++RNFGKE+A+ AG+D+A G+AVI +D DLQDP E+IP+++  W+ G ++V  K
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  134  RSARLGESKFKCWSAHVYYRLLDHLSEVPLQKDVGDFRLLSRRVIEDIKKLSERSRYMKG  193
            RS R  ++++K  +A+ +Y+L + +S   ++ +VGDFRL+SR V+E+IK L+ER+ +MKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  194  ILSWPGYKQTTISFERPERVAGETKWSFIQLVKLGLSGITAFSVKPLRISTWAGVLISAS  253
            ILSW G +   + + R+ERVAG +K +  +L +L+L GIT+FS  PLR+ T  G+++++ 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  254  AFGYGLWILLKTLVFGEAVAGYPSMMLIQLFLGGVQLLAIGVLGEYVGRIYAEAKARPIY  313
            +F YG W+++ TLVFG++V GYPS+++  LFLGGVQL++IGVLGEY+GRIY E+K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  314  LIMDKERN  321
             I+ K R+
Sbjct  300  -ILKKGRK  306

210) XF0176 in NC_002488


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  228 bits (850),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 131/303 (44%), Positives = 219/303 (73%), Gaps = 1/303 (0%)

Query  47   LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV  106
            +++VVP +NE +++P++  + V  ++ L   +  +++++DGS+D T  II+AL V+DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  107  GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL  166
              + ++RNFGKE A+ AGLD+++ +AV+ +D D QDP E+IP+++ +W+AG + V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  167  ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF  226
            +R  +G +KR  A  FY++  ++S   I  + GDFRL+S   ++ ++ + ER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  227  GWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF  286
            +WVG +   + Y R  R++G SKF  W+LWN+ALEGITSFST PLRV TY+GL+ A ++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  287  GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI  346
             YG W+++ +L++G+ V G P+++  IL+LGGVQLI++G++GEY+GR+Y E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  347  DTA  349
              +
Sbjct  302  KKG  304

211) Xfasm12_0149 in NC_010513


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  228 bits (850),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 219/303 (73%), Gaps = 1/303 (0%)

Query  6    LTVVIPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV  65
            +++V+P +NE +++P++  + V  ++ L   +  +++++DGS+D T  II+AL V+DP V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  66   GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL  125
              + ++RNFGKE A+ AGLD+++ +AV+ +D D QDP E+IP+++ +W+AG + V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  126  ERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF  185
            +R  +G +KR  A  FY++  ++S   I  + GDFRL+S   ++ ++ + ER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  186  GWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF  245
            +WVG +   + Y R  R++G SKF  W+LWN+ALEGITSFST PLRV TY+GL+ A ++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  246  GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI  305
             YG W+++ +L++G+ V G P+++  IL+LGGVQLI++G++GEY+GR+Y E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  306  DTA  308
              +
Sbjct  302  KKG  304

212) FNFX1_1437 in NC_017450


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (847),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 139/303 (46%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILKKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  +    P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGVVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG+ VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

213) GOX2128 in NC_006677


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (845),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 162/304 (54%), Positives = 234/304 (77%), Gaps = 1/304 (0%)

Query  4    QLSLIVPFWNEEAAISHFVRSILPVLDGIADTDWEIVCVDDGSSDGTLRELIGFCETDRR  63
            ++SL+VP  NEE AI+ F +++   ++ +   + EIV ++DGS D+T   + ++  +D  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   FRVLELSRNFGKEaaltagldaatgdaVIIIDADLQDPPEIIPKMVQAWRDGAEVVLGKR  123
               L ++RNFGKE+AL AGLD A+GDAVI ID DLQDP E+IP +++ W+ GAE+VL+KR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  IDRSSDSLLKRKTASWFYALHNRLAHIRIPGNVGDFRLMDRCVVEALKRLPERQRFMKGL  183
             DRS+D+ LKRKTA WFY LHN+++  +I  NVGDFRLM R VVE +K LPER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FAWVGFRTVSIDYVRAPRAAGMTKFSGYSLWNFALEGFTSFSSAPIRLWTYLGTAGALLS  243
            ++WVG +T  ++YVRA R AG++KF+G  LWN+ALEG+TSFS+ P+R+WTY+G   A +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  MFYALFIVLRTIVWGNPVPGYTSLfvaiiffssvqiisiGMLGEYIGRIYMETKQRPIYV  303
             +Y+  +++ T+V GNPV GY SL+V+I+F+++VQ+I+IG+LGEYIGRIY+ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  LRRT  307
            L++ 
Sbjct  301  LKKG  304

214) Acry_0724 in NC_009484


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (846),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 152/303 (51%), Positives = 222/303 (74%), Gaps = 2/303 (0%)

Query  36   VTVSVVVPFHNEAENVVPLFDRLAAVLDGLDE-DWELVCVNDGSRDATLAALQRIAARDG  94
            + +S+VVP  NE E+ +P+F +    ++ L   + E+V +NDGS+DAT + ++ +A  D 
Sbjct  1    MKISLVVPVFNE-EEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  95   RVRVIDLSRNFGKEAALTAGLDHARGAVAIPLDADLQDPPEVIPALLAKWREGYDVVNAT  154
             V  + ++RNFGKE+AL AGLDHA G   IP+D DLQDP EVIP L+ KW+ G ++V A 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  155  RASREGDGAVKRFTAHMFYRVMNRLSDVPIPRDTGDFRLIARPALEALKRLPERRRFMKG  214
            R+ R  DG +KR TA+ FY++ N++S   I  + GDFRL++R  +E +K LPER  FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  215  LFAWIGFRTATITYHRAPRHAGRTTWNYWKLWNFALEGVTSFSSAPLRLASYLGfavsvf  274
            +++W+G +T  + Y RA R AG +  N WKLWN+ALEG+TSFS+ PLR+ +Y+G+ V+ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  275  afvyaavTIFRKLAYGNPVQGYPSLLVAILFLGGVQLIALGMIGEYLGRLYEESKQRPLY  334
            +F+Y+A  I+  L +GNPV+GYPSLLV+ILFLGGVQLI++G++GEY+GR+Y E+K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  335  IVR  337
            I++
Sbjct  300  ILK  302

215) gtrB in NC_019551


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (845),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

216) FTL_0625 in NC_007880


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (845),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

217) FTH_0628 in NC_008369


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (845),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

218) XfasM23_0132 in NC_010577


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (846),  Expect = 7e-61, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 218/303 (72%), Gaps = 1/303 (0%)

Query  52   LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDTRV  111
            +++VVP +NE +++P++  + V  ++ L   +  +++++DGS+D T  II+AL V+D  V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  112  GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL  171
              + ++RNFGKE A+ AGLD+++ +AV+ +D D QDP E+IP+++ +W+AG + V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  172  ERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF  231
            +R  +G +KR  A  FY++  ++S   I  + GDFRL+S   ++ ++ + ER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  232  GWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF  291
            +WVG +   + Y R  R++G SKF  W+LWN+ALEGITSFST PLRV TY+GL+ A ++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  292  GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI  351
             YG W+++ +L++G+ V G P+++  IL+LGGVQLI++G++GEY+GR+Y E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  352  DTA  354
              +
Sbjct  302  KKG  304

219) ACMV_11480 in NC_015186


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (845),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 152/303 (51%), Positives = 222/303 (74%), Gaps = 2/303 (0%)

Query  36   VTVSVVVPFHNEAENVVPLFDRLAAVLDGLGE-DWELVCVNDGSRDATLAALQRIAARDG  94
            + +S+VVP  NE E+ +P+F +    ++ L   + E+V +NDGS+DAT + ++ +A  D 
Sbjct  1    MKISLVVPVFNE-EEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  95   RVRVIDLSRNFGKEAALTAGLDHARGAVAIPLDADLQDPPEVIPALLAKWREGYDVVNAT  154
             V  + ++RNFGKE+AL AGLDHA G   IP+D DLQDP EVIP L+ KW+ G ++V A 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  155  RASREGDGAVKRFTAHMFYRVMNRLSDVPIPRDTGDFRLIARPALEALKRLPERRRFMKG  214
            R+ R  DG +KR TA+ FY++ N++S   I  + GDFRL++R  +E +K LPER  FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  215  LFAWIGFRTATITYHRAPRHAGRTTWNYWKLWNFALEGVTSFSSAPLRLASYLGfavsvf  274
            +++W+G +T  + Y RA R AG +  N WKLWN+ALEG+TSFS+ PLR+ +Y+G+ V+ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  275  afvyaavTIFRKLAYGNPVQGYPSLLVAILFLGGVQLIALGMIGEYLGRLYEESKQRPLY  334
            +F+Y+A  I+  L +GNPV+GYPSLLV+ILFLGGVQLI++G++GEY+GR+Y E+K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  335  IVR  337
            I++
Sbjct  300  ILK  302

220) XFLM_06000 in NC_017562


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  227 bits (845),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 218/303 (72%), Gaps = 1/303 (0%)

Query  47   LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDTRV  106
            +++VVP +NE +++P++  + V  ++ L   +  +++++DGS+D T  II+AL V+D  V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  107  GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL  166
              + ++RNFGKE A+ AGLD+++ +AV+ +D D QDP E+IP+++ +W+AG + V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  167  ERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF  226
            +R  +G +KR  A  FY++  ++S   I  + GDFRL+S   ++ ++ + ER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  227  GWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF  286
            +WVG +   + Y R  R++G SKF  W+LWN+ALEGITSFST PLRV TY+GL+ A ++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  287  GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI  346
             YG W+++ +L++G+ V G P+++  IL+LGGVQLI++G++GEY+GR+Y E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  347  DTA  349
              +
Sbjct  302  KKG  304

221) Daci_0561 in NC_010002


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  226 bits (841),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 140/306 (46%), Positives = 223/306 (73%), Gaps = 5/306 (1%)

Query  22   LRLSCVVPAHNEEGNLEAFLRALDATVRTLTP-DYELIVVNDGSRDATHEI--ALRMAQE  78
            +++S VVP  NEE  +  F +++    + L P + E++ +NDGS+DAT+ I  AL +++ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  79   LPVRYLALSRNFGKEAALSAGIDHARGNAVVLIDADFQHPLEMLPQMCELWQSGYDMVYG  138
            L V  L+++RNFGKE+AL AG+DHA G+AV+ ID D+Q+P+E++P++ E WQ+G +MV +
Sbjct  60   LVVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  139  VIADRGAESGAKRVGTNLFYRLMNAGNLVKIPPNAGDFRWLDRCVADALKALPESHRFMK  198
              +DR++++  KR  ++ FY+L N  +  KI  N GDFR + R V + +K LPE + FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  199  GLYAWVGFKAAALPFVPADRTAGASSFNFRRLGSLALLGLTSFTTLPLRVWSVVGGIISL  258
            G+ +WVG ++  + +V A+R AG S FN ++L +LAL G+TSF+T+PLRVW+ +G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  259  AALLYGLWITMETLIFGNPLDGWPTLAASIMLFSGVQLMSIGILGEYIGRIYDEVKRRPT  318
             ++LYG W+ ++TL+FGNP+ G P+L  SI++++GVQL++IG+LGEYIGRIY E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  319  YLLARD  324
            Y+L ++
Sbjct  299  YILKKG  304

222) DelCs14_0505 in NC_015563


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  226 bits (841),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 140/306 (46%), Positives = 223/306 (73%), Gaps = 5/306 (1%)

Query  22   LRLSCVVPAHNEEGNLEAFLRALDATVRTLTP-DYELIVVNDGSRDATHEI--ALRMAQE  78
            +++S VVP  NEE  +  F +++    + L P + E++ +NDGS+DAT+ I  AL +++ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  79   LPVRYLALSRNFGKEAALSAGIDHARGNAVVLIDADFQHPLEMLPQMCELWQSGYDMVYG  138
            L V  L+++RNFGKE+AL AG+DHA G+AV+ ID D+Q+P+E++P++ E WQ+G +MV +
Sbjct  60   LVVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  139  VIADRGAESGAKRVGTNLFYRLMNAGNLVKIPPNAGDFRWLDRCVADALKALPESHRFMK  198
              +DR++++  KR  ++ FY+L N  +  KI  N GDFR + R V + +K LPE + FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  199  GLYAWVGFKAAALPFVPADRTAGASSFNFRRLGSLALLGLTSFTTLPLRVWSVVGGIISL  258
            G+ +WVG ++  + +V A+R AG S FN ++L +LAL G+TSF+T+PLRVW+ +G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  259  AALLYGLWITMETLIFGNPLDGWPTLAASIMLFSGVQLMSIGILGEYIGRIYDEVKRRPT  318
             ++LYG W+ ++TL+FGNP+ G P+L  SI++++GVQL++IG+LGEYIGRIY E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  319  YLLARD  324
            Y+L ++
Sbjct  299  YILKKG  304

223) PD0144 in NC_004556


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  226 bits (844),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 218/303 (72%), Gaps = 1/303 (0%)

Query  6    LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDTRV  65
            +++VVP +NE +++P++  + V  ++ L   +  +++++DGS+D T  II+AL V+D  V
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  66   GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL  125
              + ++RNFGKE A+ AGLD+++ +AV+ +D D QDP E+IP+++ +W+AG + V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  126  ERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF  185
            +R  +G +KR  A  FY++  ++S   I  + GDFRL+S   ++ ++ + ER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  186  GWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF  245
            +WVG +   + Y R  R++G SKF  W+LWN+ALEGITSFST PLRV TY+GL+ A ++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  246  GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI  305
             YG W+++ +L++G+ V G P+++  IL+LGGVQLI++G++GEY+GR+Y E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  306  DTA  308
              +
Sbjct  302  KKG  304

224) gtrB in NC_010677


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  226 bits (843),  Expect = 9e-61, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTARLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

225) VS_1138 in NC_011753


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  226 bits (843),  Expect = 9e-61, Method: Compositional matrix adjust.
 Identities = 134/301 (45%), Positives = 220/301 (74%), Gaps = 0/301 (0%)

Query  1    MSIIVPFYDEQEVLEEFHSRLTKVLDSLPIKSEIVYVDDGSKDSSLELVssftsinssis  60
            +S++VP ++E+E +  F   +    +  P   EIV+++DGSKD++  ++++++  ++ + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  61   viGLSRNFGKESAMSAGLEHCRGQAVILLDADLQDPPELIPQMIAKWREGYDVVNMQRSQ  120
             ++++RNFGKE+A+ AGL+H  G+AVI +D DLQDP E+IP++I KW+ G ++V  +RS+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  121  RDGETWFKKFSAASFYKVMNVAAKIDVPENVGDFRLLSREVVDHINQLPERNRYMKGIFS  180
            R  + ++K+ +A  FYK+ N  +   + ENVGDFRL+SREVV++I+ LPERN +MKGI+S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  181  WPGFRQATLQFKRDARFCGETKWNYLKLIGLAMDGITSFSIRPLRIATAVGGLVALTAFV  240
            W G +   +++ R  R  G +K N  KL  LA++GITSFS  PLR+ T +G +VA  +F+
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  241  YGVFIVFKTMMFGEPITGYPSMMVVQLALGGIQLLSIGLMGEYIGRIFIETKNRPLYLIQ  300
            YG  +++ T++FG+P+ GYPS++V  L LGG+QL++IG++GEYIGRI++ETK+RP Y+++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  301  S  301
             
Sbjct  303  K  303

226) gtrB in NC_008245


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGGVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

227) NE061598_07990 in NC_017453


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGGVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

228) gtrB in NC_006570


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGGVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

229) gtrB in NC_016937


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGGVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

230) gtrB in NC_016933


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  225 bits (840),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 140/303 (47%), Positives = 211/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGGVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

231) F92_03410 in NC_019537


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  225 bits (837),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 139/303 (46%), Positives = 210/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIITVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++ V +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

232) FTA_0658 in NC_009749


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  225 bits (837),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 139/303 (46%), Positives = 210/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIITVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++ V +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+YIG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

233) FTW_0435 in NC_009257


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 139/303 (46%), Positives = 210/303 (70%), Gaps = 0/303 (0%)

Query  9    SIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAI  68
            S+++PV +E E+I  ++  +  + E  P   E+VFINDGS+D T  ++       P +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   VDLSRNFGKEAALFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENR  128
            + ++RNFGKE+ALFAG+ + +GDA I+ID DLQDP E+I ++++ W  G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  DTDTSTKKHTAGLFYKVMNKISDTKLTPNAGDYRLLNRAAVNAFLELKEKIRFNKGLLTW  188
             TD   K+ TA  FYK+ NKIS  K+  N GD+RL++R  V+ +  L E+  F KG+L+W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  IGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSCIGGVVALISFIY  248
            +G +  +V   R ER AG +K N WKL +++++GITSFS  PL +W+ IG  VA ISF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  GSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQ  308
            G+ +++ +L+FG  V GYPSL+  ILF++G+Q+IGIG+LG YIGRI++ETK RP YI+++
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  309  VHR  311
             ++
Sbjct  304  GRK  306

234) Csal_1246 in NC_007963


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  224 bits (836),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 150/300 (50%), Positives = 217/300 (73%), Gaps = 1/300 (0%)

Query  26   LSIVVPVMNEEGAIGAFLAAVDKALDGHVARWEVVFVDDGSRDATLATLRDASRADARVR  85
            +S+VVPV NEE AI  F  +V    +      E+VF++DGS+DAT + +   + +D+ V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  86   YLSLTRNFGKEaaltaglahahgdaIVPMDVDLQDPPHVILEFVRLWREEGFDMVYGVRG  145
             LS+TRNFGKE+AL AGL HA GDA++P+DVDLQDP +VI +++  W + G +MV + R+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEMVLAKRS  121

Query  146  TREEDTHTKRATAGLFYRFFNRLSDTPIPHNAGDFRLMDRRVVDALNRLPERSRFMKGLF  205
             R  D + KR TA  FY++ N++S   I +N GDFRLM R VV+ ++ LPER+ FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  206  SWPGYRTTGVRYARPSRETGSSKFNYWKLWNFALDGVVSFSTWPLRIWSYCGAVIALIAF  265
            SW G +T  V Y R+ R +G SKFN WKLWN+AL+G+ SFST PLR+W+Y G  +A I+F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  266  LYIVLLVGRVVLFGSDVPGYASLMTAILFFGGMQLLSIGILGEYVGRLFIETKQRPLYLV  325
            LY   ++   ++FG+ V GY+SL+ +ILF+GG+QL++IG+LGEY+GR+++ETK RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

235) AFE_1776 in NC_011761


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  224 bits (834),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 146/303 (49%), Positives = 218/303 (72%), Gaps = 0/303 (0%)

Query  1    MTASIIVPCHNESGSLQTLYTRVRAVMDEAGEPWEMICINDGSGDDTLLQLIALHHQDRR  60
            M  S++VP  NE  ++  +Y  VR   +      E++ INDGS D T   + AL   D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VRVIDLSRNFGKeaaltagldaalgeaaIPLDADLQDPPELIPELLARWREGFDVVNAVR  120
            V  + ++RNFGKE+AL AGLD A G+A IP+D DLQDP E+IP+L+ +W+ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  LSREGESWLKRASAHVFYRIINRMSDVGIPPDTGDFRLLSRPVLEALQALPERRRFMKGL  180
              R  +++LKR +A+ FY++ N++S   I  + GDFRL+SR V+E ++ LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  FAWVGFRSTNVYYHRAPRHAGKTTWSYWRLWNLAVEGITSFSQVPLQLAAYLGFAVSLLA  240
            ++WVG ++  V Y RA R AG +  + W+LWNLA+EGITSFS  PL++ +Y+G+ V+ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLYAVWLVISTLAYGNPVKGYPSIMVTLLFLGGVQLMALGVIGEYLGRIYEESKHRPIYL  300
            FLY+ W++I TL +GNPV+GYPS++V++LFLGGVQL+++GV+GEY+GRIY E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  VRQ  303
            +++
Sbjct  301  LKK  303

236) Lferr_1452 in NC_011206


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  223 bits (829),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 145/303 (48%), Positives = 218/303 (72%), Gaps = 0/303 (0%)

Query  15   VTASIIVPCHNESGSLQTLYTRVRAVMDEAGEPWEMICINDGSGDDTLLQLIALHHQDRR  74
            +  S++VP  NE  ++  +Y  VR   +      E++ INDGS D T   + AL   D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   VRVIDLSRNFGKeaaltagldaalgeaaIPLDADLQDPPELIPELLARWREGFDVVNAVR  134
            V  + ++RNFGKE+AL AGLD A G+A IP+D DLQDP E+IP+L+ +W+ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  LSREGESWLKRASAHVFYRIINRMSDVGIPPDTGDFRLLSRPVLEALQALPERRRFMKGL  194
              R  +++LKR +A+ FY++ N++S   I  + GDFRL+SR V+E ++ LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FAWVGFRSTNVYYHRAPRHAGKTTWSYWRLWNLAVEGITSFSQVPLQLAAYLGFAVSLLA  254
            ++WVG ++  V Y RA R AG +  + W+LWNLA+EGITSFS  PL++ +Y+G+ V+ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FLYAVWLVISTLAYGNPVKGYPSIMVTLLFLGGVQLMALGVIGEYLGRIYEESKHRPIYL  314
            FLY+ W++I TL +GNPV+GYPS++V++LFLGGVQL+++GV+GEY+GRIY E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  VRQ  317
            +++
Sbjct  301  LKK  303

237) DSC_04930 in NC_016147


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  223 bits (829),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 138/304 (46%), Positives = 214/304 (71%), Gaps = 2/304 (0%)

Query  5    RLTVVIAARNEEQALPRLHQRLRAVLDRLDAVSTRVLYIDDGSTDRTWEAMQALASRDAQ  64
            ++++V++  NEE+A+P + + +R  ++ L +    +++I+DGS D T   ++ALA  D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VELLRLSRNFGKEAALTAGLDLVAEDSAVMILDADGQDPPELIPQFVSAWREGHDNVFGT  124
            V  L ++RNFGKE+AL AGLD  + D AV+ +D D QDP E+IP+++  W+ G + V++ 
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  125  RVERDGEGWLKRFTAHGFYRLIGRLSKTPIPADTGDFRLLSPRAHLALRQLRERHRFMKG  184
            R +R  +G+LKR TA+ FY+L  ++S   I  + GDFRL+S      ++ L ER+ FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  185  LFGWVGYGPLSIPYHRQARIAGRSKFGAWKLWNFALEGITSFSTAPLRAATYLGLIVAVL  244
            +++WVG     + Y R  R+AG SKF +WKLWN+ALEGITSFST PLR  TY+GL+VA +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  245  SFVYAVIVIARALAHGDPVAGWPSMMTVVLFLGGTQLIALGLIGEYLGRLYEEAKQRPLY  304
            SF+Y+  +I  +L  G+PV G PS++  +LFLGG QLI++G++GEY+GR+Y E+K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  305  LVQQ  308
            ++++
Sbjct  300  ILKK  303

238) AZKH_0687 in NC_020516


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  222 bits (827),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 137/303 (46%), Positives = 215/303 (71%), Gaps = 7/303 (2%)

Query  22   LSVVIPLYNESGSLDALHTRLQAVIAQLPVSGHEIVFVDDGSRDTTYAEASALCAVDPAL  81
            +S+V+P++NE  ++  +   ++  + +L     EIVF++DGS+D+T +  +AL   DP +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  82   RAIRFARNFGKEaamaaglraargDIVVLMDGDLQHPPELIPEMVARWQQGAKMVTAVRR  141
             ++ F+RNFGKE+A+ AGL  A GD V+ +D DLQ+P E+IP+++ +WQ GA MV A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  142  SRDTDPWLRRQLSRGFYGLFKRVSEVALAEGGGDFRLFDRAVVDAINSLPERTRFMKGIT  201
             R TD +L+R+ +  FY L +++S   + E  GDFRL  R VV+ I+ LPER  FMKGI 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  202  SWVGFRQEEIDFEPAERAAGAS---AWSLLRLLRYAIDGLSAFSTLPLRVWSLMGIMISA  258
            SWVG + + +++  AER AG S   +W L  L   A++G+++FST+PLRVW+ +G+ +++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVAS  238

Query  259  ISVLYGGFLVVRTAIFGIDVPGYASIIVSVLFLSGIQLISLGVLGEYVGRIFTEVKGRPL  318
            IS LYG+ +++ T +FG  V GY+S++VS+LFL+G+QLI++GVLGEY+GRI+ E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  319  YLV  321
            Y++
Sbjct  299  YIL  301

239) G432_09525 in NC_020561


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  221 bits (823),  Expect = 3e-59, Method: Compositional matrix adjust.
 Identities = 169/307 (56%), Positives = 235/307 (77%), Gaps = 6/307 (1%)

Query  5    RLSVIVPVKDEEAAIAPFVTRVGGVLDGLREPDGTPLSWEILFIDDGSKDatlaaihaah  64
            ++S++VPV +EE AI+ F   V   ++ L+     P   EI+FI+DGSKDAT + I+A  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELK-----PYEVEIVFINDGSKDATESIINALA  55

Query  65   raDPRVWALSLSRNFGKEAALSAGLDHALGDAVIPIDVDMQDPPEVIGEMLDRWRAGCEV  124
             +DP V +LS++RNFGKE+AL AGLDHA GDAVIPIDVD+QDP EVI +++++W+AG E+
Sbjct  56   VSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  125  VYGIRRDRQTDSLPKRMTADLYYRAHNWLSSDKIPEHAGDFRLLDRKVVEVIKLMPERNR  184
            V + R DR TD+  KR TA+ +Y+ HN +S+ KI E+ GDFRL+ R VVE IKL+PERN 
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  185  FMKGLFAWSGFRQAGVEYDRAERQVGRTKFNYWKLWTLALDGITSASTVPLRIWSYLGAM  244
            FMKG+++W G +   VEY RAER  G +KFN WKLW LAL+GITS ST PLR+W+Y+G  
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLF  235

Query  245  IalvalvyaafvvIRTVIYGADVAGYPSMMVAIlflggvqllslgvlgEYIGRILVEVKR  304
            +A ++++Y+A ++I T+++G  V GYPS++V+ILFLGGVQL+++GVLGEYIGRI +E K 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  305  RPIYVIR  311
            RP Y+++
Sbjct  296  RPKYILK  302

240) FSU_0817 in NC_017448


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  221 bits (823),  Expect = 3e-59, Method: Compositional matrix adjust.
 Identities = 138/304 (46%), Positives = 212/304 (70%), Gaps = 3/304 (0%)

Query  1    MLLSVIIPVFNEEEIVAETYRVLEE--ELKDIEHELIFVNDGSKDRTREIVEGLLPGNPN  58
            M +S+++PVFNEEE ++  Y+ + E  ELK  E E++F+NDGSKD T  I+++L  ++P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   NKIINFSRNFGHQAAFSAGLDHAQGAAVVIIDGDLQDPPSLIHEMLKKWREGYQVVYAQR  118
               ++F+RNFG ++A+ AGLDHA G AV+ ID DLQDP  +I +++ KW+ G ++V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  119  NKRKGETLFKRFTAFCFYRIIGKLTSIDIPPDTGDFRLMDRCVVDQLKNLPERSRFLRGL  178
            + R  +  +KR TA  FY++  K+++  I  + GDFRLM R VV+++K LPER+ F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  179  VCWVGFKKIGVKYDRAERTAGTSKYPLKKMLRLAFDGITGFSSAPLKISFYMGFIATIVG  238
            + WVG +   V Y RAER AG SK+   K+  LA++GIT+FS+ PL++  Y+G++ + ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  239  FALLVWSILEKFLSPATTVPGWASLMTAIVFFAGVQLLTIGILGEYIGRIYDEVKQRPLY  298
            F    W I++  L  +  V G +SL+ +I+F++GVQL+ IG+LGEYIGRIY E K RP Y
Sbjct  241  FLYGAWMIIDT-LVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IEDK  302
            I  K
Sbjct  300  ILKK  303

241) Fisuc_0402 in NC_013410


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  221 bits (823),  Expect = 3e-59, Method: Compositional matrix adjust.
 Identities = 138/304 (46%), Positives = 212/304 (70%), Gaps = 3/304 (0%)

Query  1    MLLSVIIPVFNEEEIVAETYRVLEE--ELKDIEHELIFVNDGSKDRTREIVEGLLPGNPN  58
            M +S+++PVFNEEE ++  Y+ + E  ELK  E E++F+NDGSKD T  I+++L  ++P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   NKIINFSRNFGHQAAFSAGLDHAQGAAVVIIDGDLQDPPSLIHEMLKKWREGYQVVYAQR  118
               ++F+RNFG ++A+ AGLDHA G AV+ ID DLQDP  +I +++ KW+ G ++V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  119  NKRKGETLFKRFTAFCFYRIIGKLTSIDIPPDTGDFRLMDRCVVDQLKNLPERSRFLRGL  178
            + R  +  +KR TA  FY++  K+++  I  + GDFRLM R VV+++K LPER+ F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  179  VCWVGFKKIGVKYDRAERTAGTSKYPLKKMLRLAFDGITGFSSAPLKISFYMGFIATIVG  238
            + WVG +   V Y RAER AG SK+   K+  LA++GIT+FS+ PL++  Y+G++ + ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  239  FALLVWSILEKFLSPATTVPGWASLMTAIVFFAGVQLLTIGILGEYIGRIYDEVKQRPLY  298
            F    W I++  L  +  V G +SL+ +I+F++GVQL+ IG+LGEYIGRIY E K RP Y
Sbjct  241  FLYGAWMIIDT-LVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IEDK  302
            I  K
Sbjct  300  ILKK  303

242) yfdH in NC_013861


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  221 bits (822),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 137/304 (46%), Positives = 216/304 (72%), Gaps = 1/304 (0%)

Query  9    KRISCVVPVFNEEAGIAEFITALAETLKNLNYAYEILLVDDGSKDNTPAIIQQLR-SHFV  67
             +IS VVPVFNEE +I+ F  ++ E      Y  EI++++DGSKD T +II+ L  S+ +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  68   LRCIRFSRNFGKENAISAGLDHAQGDAVILLDADFQHPLELLSQFIAKWEDGYDMVYAVR  127
            +  + F+RNFGKE A+ AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  128  QNRTNESWIKRTCAKAFYQFTSRINRINIPANAGDFRLLDRKIVNALQKLPERNRFMKGL  187
             +R+ ++++KR  A  FY++ ++I+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  188  YSWVGFKQIAIPFEVQPRKTGNSQWNFYSLLDLAITGITSFTAFPLRMIAIGGISVATIA  247
             SWVG +   + +    R +G S+ N   L +LA+ GITSF++FPLR+ +  G+ VA+I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  248  ILYGIWIILSTLIFGKETPGWATIVTTISFFGGLQLFALGVVGEYIGRVFDEVKHRPHYI  307
            +LYG W+I+ TL+FG+   G ++++ +I F+GG+QL+++GV+GEYIGR++ E K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  308  IDEE  311
            +   
Sbjct  301  LKKG  304

243) M892_16935 in NC_022269


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  220 bits (818),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 146/301 (49%), Positives = 216/301 (72%), Gaps = 0/301 (0%)

Query  24   LSVVVPFFNEQEVLPEFHRRLVAVLDAMPERCEIVYVDDGSKDDSLMIAQNFSQSSSDIR  83
            +S+VVP FNE+E +P F + +    +  P   EIV+++DGSKD +  I + ++ S + + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  84   CIALSRNFGKESAMSAGLEHCQGEAVIVIDADLQDPPELIPKMVSKWREGYDVVNMQRSE  143
             ++++RNFGKE+A+ AGL+H  G+AVI ID DLQDP E+IP ++ KW+ G ++V  +RS+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  144  RHGETWFKRFSAACFYKVLNSMAKLDVPENVGDFRLLSAEVVKHINALPERNRYMKGIFS  203
            R  + ++KR +A  FYK+ N ++   + ENVGDFRL+S EVV +I+ LPERN +MKGI+S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  204  WPGFKQVTVQFERDARFCGETKWNYLKLIGLAMDAITSFSIRPLRLATLAGALVAFSAFL  263
            W G +   V++ R  R  G +K N  KL  LA+++ITSFS  PLR+ T  G +VA  +FL
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  264  YGAFIVMKTVVFGEPVTGYPSMMvvqlalggvqllSIGLLGEYIGRIFVETKQRPLYLIQ  323
            YGA +++ T+VFG+PV GYPS++V  L LGGVQL++IG+LGEYIGRI++ETK RP Y+++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  324  S  324
             
Sbjct  303  K  303

244) VIBHAR_02791 in NC_009783


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  220 bits (818),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 146/301 (49%), Positives = 216/301 (72%), Gaps = 0/301 (0%)

Query  24   LSVVVPFFNEQEVLPEFHRRLVAVLDAMPERCEIVYVDDGSKDDSLMIAQNFSQSSSDIR  83
            +S+VVP FNE+E +P F + +    +  P   EIV+++DGSKD +  I + ++ S + + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  84   CIALSRNFGKESAMSAGLEHCQGEAVIVIDADLQDPPELIPKMVSKWREGYDVVNMQRSE  143
             ++++RNFGKE+A+ AGL+H  G+AVI ID DLQDP E+IP ++ KW+ G ++V  +RS+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  144  RHGETWFKRFSAACFYKVLNSMAKLDVPENVGDFRLLSAEVVKHINALPERNRYMKGIFS  203
            R  + ++KR +A  FYK+ N ++   + ENVGDFRL+S EVV +I+ LPERN +MKGI+S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  204  WPGFKQVTVQFERDARFCGETKWNYLKLIGLAMDAITSFSIRPLRLATLAGALVAFSAFL  263
            W G +   V++ R  R  G +K N  KL  LA+++ITSFS  PLR+ T  G +VA  +FL
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  264  YGAFIVMKTVVFGEPVTGYPSMMvvqlalggvqllSIGLLGEYIGRIFVETKQRPLYLIQ  323
            YGA +++ T+VFG+PV GYPS++V  L LGGVQL++IG+LGEYIGRI++ETK RP Y+++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  324  S  324
             
Sbjct  303  K  303

245) OG1RF_11706 in NC_017316


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  220 bits (818),  Expect = 8e-59, Method: Compositional matrix adjust.
 Identities = 131/307 (43%), Positives = 208/307 (68%), Gaps = 8/307 (2%)

Query  4    KILISIPAYNEANNIRPLYKKLNETLEKKRNEVDFEILFINDGSKDNTVSEVLSLIEQTD  63
            KI + +P +NE + I  +YK + E  E K  EV  EI+FINDGSKD T S + +L     
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDP  59

Query  64   NVSLIDLSRNYGKEIAMSAGFDYSTHDAVITMDADLQHPPATIIDMIDLWQQGYEDVYAK  123
             V  + ++RN+GKE A+ AG+D ++ DAVI +D DLQ+P   I ++I+ WQ G E V AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  124  RNQRKGESWFKKTSSKWFYKVLGKLANTPVLPDAGDYRLLDRKVVEALKQMRESQRYTKG  183
            R++R  ++++K+ ++ WFYK+  K++   +  + GD+RL+ R VVE +K + E + + KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  184  LYNWVGFKKVAIEFDADERLHGETK---WSFGALLKLAIEGITSYTTAPLKISMYFGFLV  240
            + +WVG +   +E+   ER+ G +K   W    L +LA+EGITS++T PL++  Y+G++V
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWK---LWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  241  SFVAFIYMIYVLIKTLIFGADTSGFPSLMIMILFLGGCQLISVGILGEYVGRVFLETKKR  300
            + ++F+Y   ++I TL+FG    G+PSL++ ILFLGG QLI++G+LGEY+GR++LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  301  PLYFVEN  307
            P Y++ +
Sbjct  297  PKYILKK  303

246) gtrB in NC_010943


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  220 bits (818),  Expect = 9e-59, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 213/302 (71%), Gaps = 1/302 (0%)

Query  5    RLTFVIAAYNEALALPLLHPRLCAVLDALPDIDGHILYVDDGSHDGTWEVIARLAQSDAR  64
            ++++V++ +NE  A+P++   +   ++ L   + +I++++DGS D+T  +I  LA SD+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VSALKLSRNFGKEAALTAGLDLVREGAAMILDADGQDPPEIVPQFVARWREGHDNVYGTR  124
            V +L ++RNFGKE+AL AGLD    +A + +D D QDP E++P+++ +W+ G + V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  LARDGEAWIKRATAAIFYRVMGRLSRTPIPADTGDFrllspralsalrEMRERHRFMKGL  184
              R  ++++KR TA  FY++  ++S   I  + GDFRL+S   +  ++ + ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  FSWVGFKRVAVPYHRHARVAGTSKFSLWRLWNFALEGITGFSTVPLRAATYLGLATAAVA  244
            +SWVG +   V Y R  RVAG SKF+ W+LWN+ALEGIT+FST PLR  TY+GL  A+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FVFGMWVIVKAALYGDRVAGWPTMMAVILFLGGVQLIALGLIGEYLGRLYEESKQRPLYL  304
            F++G W+I+ + ++G+ V G P+++  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  305  VD  306
            + 
Sbjct  301  LK  302

247) Maqu_0288 in NC_008740


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  219 bits (816),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 142/299 (48%), Positives = 213/299 (72%), Gaps = 0/299 (0%)

Query  13   LSIVIPVHNEAEVLPALLARLWTTGQNLDGSFELLFVDDGSRDDSVAILMAARQRQPEIR  72
            +S+V+PV NE E +P +   ++   +      E++F++DGS+D + +I+ A    +P + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  73   VLQLSRNFGKEAAVSAGLEHARGEAVVLMDADLQDPPELIPDMLAQWRKGADVVLMKRRS  132
             L ++RNFGKE+A+ AGL+HA G+AV+ +D DLQDP E+IP+++ +W+ GA++VL KR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  133  RAGESWLKRITASLFYRLINRISDSPIPVDTGDFRLMSRRTVEALKQLPERNRYLKGMFA  192
            R+ +++LKR TA  FY+L N+IS + I  + GDFRLMSR  VE +K LPERN ++KG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  193  WVGMPTVTLEFDRDPRTAGTTKWNYLKLVHLAMEGITSFSTRPLRlalvlgllaagagga  252
            WVG  T  +E+ R  R AG +K N  KL +LA+EGITSFST PLR+   +GL+ A+ +  
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  253  vglWEVIRALVFGISTPGYASLIAMVTFLSGVQLLCVGLLGEYIGRIYMETKQRPVFIV  311
             G W +I +LVFG +  GY+SL+  + FL+GVQL+ +G+LGEYIGRIY+ETK RP +I+
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

248) EFS1_1765 in NC_019770


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  219 bits (815),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 131/307 (43%), Positives = 208/307 (68%), Gaps = 8/307 (2%)

Query  4    KILISIPAYNEANNIRPLYKKLNETLEKKRNEVDFEILFINDGSKDNTVSEVLSLIEQTD  63
            KI + +P +NE + I  +YK + E  E K  EV  EI+FINDGSKD T S + +L     
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDP  59

Query  64   NVSLIDLSRNYGKEIAMSAGFDYSTHDAVITMDADLQHPPATIIDMIDLWQQGYEDVYAK  123
             V  + ++RN+GKE A+ AG+D ++ DAVI +D DLQ+P   I ++I+ WQ G E V AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  124  RNQRKGESWFKKISSKWFYKVLGKLANTPVLPDAGDYRLLDRKVVEALKQMRESQRYTKG  183
            R++R  ++++K+ ++ WFYK+  K++   +  + GD+RL+ R VVE +K + E + + KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  184  LYNWVGFKKVAIEFDADERLHGETK---WSFGALLKLAIEGITSYTTAPLKISMYFGFLV  240
            + +WVG +   +E+   ER+ G +K   W    L +LA+EGITS++T PL++  Y+G++V
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWK---LWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  241  SFVAFIYMIYVLIKTLIFGADTSGFPSLMIMILFLGGCQLISVGILGEYVGRVFLETKKR  300
            + ++F+Y   ++I TL+FG    G+PSL++ ILFLGG QLI++G+LGEY+GR++LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  301  PLYFVEN  307
            P Y++ +
Sbjct  297  PKYILKK  303

249) N646_1065 in NC_022349


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  218 bits (813),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 145/301 (49%), Positives = 216/301 (72%), Gaps = 0/301 (0%)

Query  24   LSVVVPFFNEQEVLTEFHRRLAAVLDEMPEHCEIVYVDDGSKDDSLMIAQNFSQSSSDVR  83
            +S+VVP FNE+E +  F + +    +  P + EIV+++DGSKD +  I + ++ S + V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  84   CIALSRNFGKESAMSAGLEHCQGEAVIVIDADLQDPPELIPQMVSKWREGYDVVNMQRSE  143
             ++++RNFGKE+A+ AGL+H  G+AVI ID DLQDP E+IP+++ KW+ G ++V  +RS+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  144  RHGETWFKRFSAACFYKVLNSMAKLDVPENVGDFRLLSAKVVKHINALPERNRYMKGIFS  203
            R  + ++KR +A  FYK+ N ++   + ENVGDFRL+S  VV +I+ LPERN +MKGI+S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  204  WPGFKQVTVQFERDARFCGETKWNYLKLIGLAMDGITSFSIRPLRLATLAGALVAFSAFI  263
            W G +   V++ R  R  G +K N  KL  LA++GITSFS  PLR+ T  G +VA  +F+
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  264  YGAFIVMKTVVFGEPVTGYPSMMvvqlalggvqllSIGLLGEYIGRIFVETKQRPLYLVQ  323
            YGA +++ T+VFG+PV GYPS++V  L LGGVQL++IG+LGEYIGRI++ETK RP Y+++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  324  S  324
             
Sbjct  303  K  303

250) mma_2834 in NC_009659


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  218 bits (813),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 134/304 (45%), Positives = 212/304 (70%), Gaps = 5/304 (1%)

Query  17   ISCVIPAYNEAAHLADFLRDLR--KTLAGFAVRYEIIVINDGSSDNTDQVMAPLLAESGL  74
            IS V+P +NE   ++ F + +R  + L  + V  EI+ INDGS D T+ ++ +L     L
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  75   RY-ISFSRNFGKEAALSAGIDAAQGDAVILMDSDYQHPLELLPEMTRLWQSGIDMVYGVI  133
               +SF+RNFGKE+AL AG+D A GDAVI +D D Q+P+E++P++   WQ+G +MV +  
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  134  SDRSNESRLKRWGTGMFYHLMESGSPITIPRNAGDFRLMDKQVVNALRQLPERNRFMKGL  193
            SDRS ++RLKR  +  FY L +  S   I  N GDFRLM ++VV+ ++ LPERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  194  YAWVGFSSIALPFVPADRATGVSSFNYRSLSRLALAGVTAFTTLPLRIWsgvgvvisivA  253
             +WVG  +  + +V A+R +G+S FN + L  LAL G+T+F+T+PLR+W+ +G+ ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  254  LMYAFWIAGESLLFGNDVPGWSTLAAGLMFFSGIQLISIGVLGEYLGRVYDEVKKRPLYV  313
            ++Y+ W+  ++L+FGN V G ++L  +++F++G+QLI+IGVLGEY+GR+Y E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  314  VAHD  317
            +  +
Sbjct  301  LKKG  304

251) SL003B_0458 in NC_015259


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  218 bits (811),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 136/302 (46%), Positives = 214/302 (71%), Gaps = 2/302 (0%)

Query  22   LSLIVPVYNEAEVLDLFLAETGSALAGQTVAVEYVFVDDGSRDASADLIGA-RLAAGLPG  80
            +SL+VPV+NE E + +F          +   VE VF++DGS+DA+  +I A  ++  L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  81   RLVGLSRNFGKEAAMTAGLQHARGDIVVVLDADLQDPPALVPQMIDAWRAGYDVVYGLRV  140
             L +++RNFGKE+A+ AGL+HA GD V+ +D DLQDP  ++P++I+ W+AG ++V + R 
Sbjct  63   PL-SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  141  DRSSDTAMKRGTASLFYRLFNRLAHIDMPANAGDFRLMDRRVVEALLSLPERNRFMKGLF  200
            DRS+D  +KR TA  FY+L N+++   +  N GDFRLM R VVE +  LPERN FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  201  AWVGFPSVAIPYERPPRRAGAGKWNYWKLWNFALDGFTGFTTVPLRMWlyggalaaalal  260
            +WVG  +  + Y R+ R AG +K N WKLWN+AL+G+T+F+T PLR+W Y G + A++++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  261  ayaaFLIVRVLAYGIDVPGYASTMTAILFFAGVQLLSIGMIGEYVARLFTEAKQRPVFLV  320
             Y+A +I+  L +G  V GY+S + +ILF++GVQL++IG++GEY++R++ E+K RP +++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  321  QD  322
            + 
Sbjct  302  KK  303

252) gtrB in NC_017671


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  218 bits (812),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 127/302 (43%), Positives = 213/302 (71%), Gaps = 1/302 (0%)

Query  5    RLTFVIAAYNEALALPLLHPRLCAVLDGMPDIDGHILYVDDGSHDRTWEVIAGLAQADAR  64
            ++++V++ +NE  A+P++   +   ++ +   + +I++++DGS D T  +I +LA +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VSALKLSRNFGKEAALTAGLDLVHEGAAMILDADGQDPPELVPQFVARWREGHDNVYGTR  124
            V +L ++RNFGKE+AL AGLD    +A + +D D QDP E++P+++ +W+ G + V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  MARDGESWIKRATAAMFYRVMGRLSRTPIPADTGDFrllspralsalrGMRERHRFMKGL  184
              R  ++++KR TA  FY++  ++S   I  + GDFRL+S   +  ++ + ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  FSWVGFKRIAVPYHRHARVAGTSKFSLWRLWNFALEGITGFSTVPLRAATYLGLATAAVA  244
            +SWVG +   V Y R  RVAG SKF+ W+LWN+ALEGIT+FST PLR  TY+GL  A+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FVFGLWVIVKAALYGDRVAGWPTMMAVILFLGGVQLIALGLVGEYLGRLYEESKQRPLYL  304
            F++G W+I+ + ++G+ V G P+++  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  305  VD  306
            + 
Sbjct  301  LK  302

253) Cyan7822_3621 in NC_014501


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  218 bits (810),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 145/307 (48%), Positives = 221/307 (72%), Gaps = 4/307 (1%)

Query  8    IELSIVVPLYNEAPNINKLFERLLWTLNSLNITYE--IVCVDDGSRDKTLERLREYHFRH  65
            + +S+VVP++NE   I  +F + ++ ++ L+  YE  IV ++DGS+D T   +      +
Sbjct  1    MKISLVVPVFNEEEAIP-VFYKTVREFQELK-PYEVEIVFINDGSKDATESIINALAVSD  58

Query  66   PEIKVVALSRNFGKEIALTAGIDHAQGRAVIPIDADLQDPPELIEQLMAKWREGYEVVYA  125
            P +  ++++RNFGKE AL AG+DHA G AVIPID DLQDP E+I +L+ KW+ G E+V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  126  KRRVRQGETWFKRFSANAFYRVIERLSSIAIPRDTGDFRLLDRRVVEALKQLPERTRFMK  185
            KR  R  + ++KR +A+ FY++ +++S+  I  + GDFRL+ R VVE +K LPER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GLFAWVGFKQTYILYDRLPRYKGQTKWNYWKLWNFALDGITSFSLVPLKVWSYLGlilsl  245
            G+++WVG +   + Y R  R  G +K N WKLWN+AL+GITSFS  PL+VW+Y+GL+++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  lafayasfliaRTLIFGIDVPGYASLMVTVLFIGGVQLISLGVIGEYLGRIYEEVKQRPL  305
            ++F Y++ +I  TL+FG  V GY+SL+V++LF+GGVQLI++GV+GEY+GRIY E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLVRESH  312
            Y+++ ++
Sbjct  299  YILKKGR  305

254) Smal_3057 in NC_011071


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  217 bits (809),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 213/302 (71%), Gaps = 1/302 (0%)

Query  5    RLTFVIAAYNEALALPLLHPRLCAVLDGMPDIEGHILYVDDGSHDGTWEVIAGLAQSDVR  64
            ++++V++ +NE  A+P++   +   ++ +   E +I++++DGS D+T  +I +LA SD  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VSALKLSRNFGKEAALTAGLDLVRDGAAMILDADGQDPPELVPEFVARWREGHDNVYGTR  124
            V +L ++RNFGKE+AL AGLD   ++A + +D D QDP E++P+++ +W+ G + V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  MARDGEAWVKRATAAMFYRVIGRLSRTPIPADTGDFrllsaralsalrEMRERHRFMKGL  184
              R  ++++KR TA  FY++  ++S   I  + GDFRL+S   +  ++ + ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  FSWVGFKRIAVPYHRHARVAGSSKFSLWRLWNFALEGITGFSTVPLRAATYMGLATAAVA  244
            +SWVG +   V Y R  RVAG SKF+ W+LWN+ALEGIT+FST PLR  TY+GL  A+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FVFGVWVIAKAALYGDRVAGWPTMMAVILFLGGVQLIALGLIGEYLGRLYEESKQRPLYL  304
            F++G W+I  + ++G+ V G P+++  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  305  VD  306
            + 
Sbjct  301  LK  302

255) azo0749 in NC_008702


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  217 bits (808),  Expect = 6e-58, Method: Compositional matrix adjust.
 Identities = 135/302 (45%), Positives = 214/302 (71%), Gaps = 3/302 (0%)

Query  28   LSIVIPLYNESGSLGLLHQRLGAVLDTLGLSVERRELVFVDDGSRDTTFAEVAMLRAVDP  87
            +S+V+P++NE  ++ ++ +   +V +   L     E+VF++DGS+D+T + +  L   DP
Sbjct  3    ISLVVPVFNEEEAIPVFYK---TVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  88   CVRAIRFARNFGKEaamaaglraaTGDVVILMDGDLQHPPELIPEMVRRWQQGADMVTAV  147
             V ++ F+RNFGKE+A+ AGL  A+GD VI +D DLQ+P E+IP+++ +WQ GA+MV A 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  148  RRSRDTDPWLRRQLSQAFYGLFKRVSEVALAEGGGDFRLFDRKVVAAINSLPERTRFMKG  207
            R  R TD +L+R+ ++ FY L +++S   + E  GDFRL  R VV  I+ LPER  FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  208  ITSWVGFRQVEVDFDPEERAAGASAWSMLRLLRYAVDGLSTFSTLPLRVWSLVGMAMAAI  267
            I SWVG +   V++   ER AG S  +  +L   A++G+++FST+PLRVW+ +G+ +A+I
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  268  SGLYGTWLVVRTAIWGIDVPGYASIMVAVLFLSGIQLISLGVLGEYVGRIFTEVKARPLF  327
            S LYG+W+++ T + G  V GY+S++V++LFL+G+QLI++GVLGEY+GRI+ E K+RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  328  LV  329
            ++
Sbjct  300  IL  301

256) Atc_0126 in NC_015850


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  217 bits (806),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 156/302 (52%), Positives = 218/302 (73%), Gaps = 0/302 (0%)

Query  8    VSLVVPCHDEAANLSTLYGRVRAVMDESGKSWEMVCINDGSKDDTLERLLTLHEKDPRIV  67
            +SLVVP  +E   ++ +Y  VR   +      E+V INDGSKD T   + +L   DP +V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  68   VIDLSRNFGKEAALTAGLDYARGECAIPLDADLQDPPELIPVLLAKWQEGYEVVNAVRLS  127
             + ++RNFGKE+AL AGLD A G+  IP+D DLQDP E+IP L+ KWQ G E+V A R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  128  RDGESWAKRASAHVFYRILNRISEVAIPEDTGDFRLLSRPVLEAIKMLPERRRFMKGLFA  187
            R  +++ KR +A+ FY++ N+IS   I E+ GDFRL+SR V+E IK+LPER  FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  188  WVGFRTTQVYYRREPRNAGNTKWNYRRLLNLAVEGITSFSQVPLRLAAHLGLMVSILAFL  247
            WVG +T  V Y R  R AG +K N ++L NLA+EGITSFS  PLR+ + +GL V+ ++FL
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  248  YAIYMVIGTLVYGNPVKGYPSlmvvvlflggvqllalgIIGEYISRIYEESKQRPIYLVK  307
            Y+  M+I+TLV+GNPV+GYPSL+V +LFLGGVQL+++G++GEYI+RIY E+K RP Y++K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  308  NT  309
            + 
Sbjct  303  KG  304

257) Neut_0041 in NC_008344


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  216 bits (804),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 145/310 (47%), Positives = 225/310 (73%), Gaps = 8/310 (2%)

Query  19   ELSVVIPLYNEQEVITVMYERLTAVLAELQVAYE--LVLVDDGSRDGTPAMMRRLTKDDS  76
             +S+V+P++NE+E I V Y  +   + EL+ +YE  +V+++DGS+D+T +++  L+  D+
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDP  59

Query  77   AVTAVFLSRNFGKEaaltaglahavgaavvIMDADLQDPPELIPQMMQAWNEGADVVCMR  136
             V ++ ++RNFGKE+AL AGL HA G AV+ +D DLQDP E+IP++++ W+ GA++V  +
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  137  RSSRAGETWFKRRSAHHFYRVLNAVSDVEIPPDTGDFRLLSRKAIYALQQLNERNRYMKG  196
            RS R+ + ++KR++A+ FY++ N +S   I  + GDFRL+SR  +  ++ L ERN +MKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  197  LFAWIGLPTTVIEYDRMPRVAGTTKWNYASLFNLAFQGITSFSTAPLRLVVAGGLLTAFL  256
            +++W+G  T V+EY R  RVAG +K N   L NLA++GITSFST PLR+    GL+ A +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  257  GIIFALWIVAKTLVFGDPVQGYPSLIAMITFLGGAQLLSIGLLGEYIGKTYYETKQRPVY  316
            +++++ W++  TLVFG+PV+GYPSL+  I FLGG QL++IG+LGEYIG+ Y ETK RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  317  LVHEVLKRGR  326
                +LK+GR
Sbjct  300  ----ILKKGR  305

258) Psesu_0749 in NC_014924


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  216 bits (804),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 131/304 (44%), Positives = 215/304 (71%), Gaps = 3/304 (0%)

Query  9    LTVVVACFNEADSLPRLHPRIRGVLDGLEAEGVSGRVLYVDDGSRDDTWGRLQKIAAGDP  68
            +++VV+ FNE +++P +   +R  ++ L +  V   +++++DGS+D T + ++ +A +DP
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVE--IVFINDGSKDATESIINALAVSDP  59

Query  69   GVGLLRLSRNFGKEIALTAGLDRVTEGAAMILDADGQDPPELIPEFVARWREGFDDVYGT  128
             V  L ++RNFGKE AL AGLD+ + +A + +D D QDP E+IP+++ +W+ G + V + 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  129  RIAREGDSWLRRGTAAVFYRVIGRLSRTPVPADTGDFRLLSPRALDALRQLRERHRFMKG  188
            R  R  D++L+R TA  FY++  ++S   +  + GDFRL+S   ++ ++ L ER+ FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  189  LFGWVGFRRIAIPYKRRPRMAGRSKFSLWRLWNFALEGITSFSTAPLRLATYLGLLTALV  248
            +++WVG +   + Y R  R+AG SKF+ W+LWN+ALEGITSFST PLR+ TY+GL+ A +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  249  AFFAGIVVVLKTLVWGDSVAGWPTMMVVILFLGGVQLIALGTIGEYLGRLYEEAKQRPLY  308
            +F+ G  +++ TLV G++V G P+++V ILFLGGVQLI++G +GEY+GR+Y E+K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  309  LVDD  312
            ++  
Sbjct  300  ILKK  303

259) DaAHT2_0384 in NC_014216


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  215 bits (801),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 150/303 (50%), Positives = 221/303 (73%), Gaps = 3/303 (0%)

Query  7    TLTVVVPVYNEAEVLPTLQHRLITVLDGLLKAAWEIIYVNDGSTDNSLEIISNF--NDPR  64
             +++VVPV+NE E +P +  + +  ++ L     EI+++NDGS D +  II+ +  +DP 
Sbjct  2    KISLVVPVFNEEEAIPVF-YKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VAIIDLSRNFGKEIAMSAGLDHAHGDAVVVIDADLQDPPELIPELIQKWQDGYDVVFAQR  124
            V  + ++RNFGKE A+ AGLDHA GDAV+ ID DLQDP E+IP+LI+KWQ G ++V+A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  IARDGETWLKKTTARLFYRAIHTLSRVKIPENTGDFrllsrravealrllrerhrFMKGL  184
              R  + +LK+ TA  FY+  + +S  KI EN GDFRL+SR  VE ++LL ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  FAWVGFTQVAVPYQREPRFAGKSKWSYWRLWNFALEGFTSFSIAPLKLATYVGLLTAFGA  244
            ++WVG     V Y R  R AG SK + W+LWN+ALEG+TSFS  PL++ TY+GL+ A  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FIGAILVFYKTLIFGDPVRGYPSLMVVILFLGGVQLMALGMIGEYLGRLFNEAKQRPLYL  304
            F+ +  ++  TL+FG+PVRGYPSL+V ILFLGGVQL+++G++GEY+GR++ E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  305  INR  307
            +++
Sbjct  301  LKK  303

260) BurJV3_3085 in NC_015947


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  215 bits (802),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 127/302 (43%), Positives = 212/302 (71%), Gaps = 1/302 (0%)

Query  10   RLTFVIAAYNEALALPLLHPRLCAVLDGMPDIDGHILYVDDGSQDRTWEVIAGLAQADAR  69
            ++++V++ +NE  A+P++   +   ++ +   + +I++++DGS+D T  +I +LA +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  70   VSALKLSRNFGKEAALTAGLDLVHEGAAMILDADGQDPPELVPKFVACWREGHDNVYGTR  129
            V +L ++RNFGKE+AL AGLD    +A + +D D QDP E++P ++  W+ G + V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  130  MARDGESWIKRATAAMFYRVMGRLSRTPIPADTGDFrllspralsalrGMRERHRFMKGL  189
              R  ++++KR TA  FY++  ++S   I  + GDFRL+S   +  ++ + ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  190  FSWVGFNRIAVPYHRHARVAGTSKFSLWRLWNFALEGITGFSTVPLRTATYLGLATAAVA  249
            +SWVG +   V Y R  RVAG SKF+ W+LWN+ALEGIT+FST PLR  TY+GL  A+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  250  FVFGLWVIVKAALYGDRVAGWPTMMAVILFLGGVQLIALGLIGEYLGRLYEESKQRPLYL  309
            F++G W+I+ + ++G+ V G P+++  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  310  VD  311
            + 
Sbjct  301  LK  302

261) gtrB1 in NC_007971


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  215 bits (800),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 142/301 (48%), Positives = 218/301 (73%), Gaps = 2/301 (0%)

Query  10   KISVVVPLFNEEAVLPQFHFRLLRVMDGLAS-DYEIIYVDDGSRDRSLAVAHNLKAAEAR  68
            KIS+VVP+FNEE  +P F ++ +R  + L + + EI++++DGS+D + ++ + L  +++ 
Sbjct  2    KISLVVPVFNEEEAIPVF-YKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  69   VGIVELSRNFGKEAALTAGLDVASGDAVVIIDADLQDPPELIPSLIEKWREGFDVVYATR  128
            V  + ++RNFGKE+AL AGLD ASGDAV+ ID DLQDP E+IP LIEKW+ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  129  TSRDGESFLKKFTAHWFYRLMGKLSDTEIPADTGDFRVMSRRAVAALGQLREQHRFMKGL  188
            + R  ++ LK+ TA+WFY+L  K+S   I  + GDFR+MSR  V  +  L E++ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  YAWIGFRQTAVLYRRDARASGTTKFNYRKLLRFAVDGITAFSTVPLKFATSIGLLVAVPA  248
             +W+G +   V Y R  R +G +KFN +KL  +A++GIT+FST PL+  T IGL+VA  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  FGMAAFIVGKTLLYGDPVHGYPSMMTAllllgglqlvflgvlgEYVGRLFNEVKRRPVYL  308
            F  +A ++  TL++G+PV+GYPS++ ++L+LGG+QL+ +GVLGEY+GR++ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  V  309
            +
Sbjct  301  L  301

262) Rpic_1751 in NC_010682


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  215 bits (800),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 142/301 (48%), Positives = 218/301 (73%), Gaps = 2/301 (0%)

Query  10   KISVVVPLFNEEAVLPQFHFRLLRVMDGLAS-DYEIIYVDDGSRDRSLAVAHNLKAAEAR  68
            KIS+VVP+FNEE  +P F ++ +R  + L + + EI++++DGS+D + ++ + L  +++ 
Sbjct  2    KISLVVPVFNEEEAIPVF-YKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  69   VGIVELSRNFGKEAALTAGLDVASGDAVVIIDADLQDPPELIPSLIEKWREGFDVVYATR  128
            V  + ++RNFGKE+AL AGLD ASGDAV+ ID DLQDP E+IP LIEKW+ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  129  TSRDGESFLKKFTAHWFYRLMGKLSDTEIPADTGDFRVMSRRAVAALGQLREQHRFMKGL  188
            + R  ++ LK+ TA+WFY+L  K+S   I  + GDFR+MSR  V  +  L E++ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  YAWIGFRQTAVLYRRDARASGTTKFNYRKLLRFAVDGITAFSTVPLKFATSIGLLVAVPA  248
             +W+G +   V Y R  R +G +KFN +KL  +A++GIT+FST PL+  T IGL+VA  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  FGMAAFIVGKTLLYGDPVHGYPSMMTAllllgglqlvflgvlgEYVGRLFNEVKRRPVYL  308
            F  +A ++  TL++G+PV+GYPS++ ++L+LGG+QL+ +GVLGEY+GR++ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  V  309
            +
Sbjct  301  L  301

263) PT7_2696 in NC_015458


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  215 bits (800),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 141/306 (47%), Positives = 217/306 (71%), Gaps = 0/306 (0%)

Query  18   VELSVVVPLYNEHEVITMMYQRLTTVLSGLAISYELVLVDDGSHDGTPNVINLLAKSDPN  77
            + +S+VVP++NE+E I + Y+ +       +   E+V+++DGS D+T ++IN LA SDP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  78   VTAVFLSRNFGKEAALTAGIEHaagaaviiidadLQDPPELIPQMLAAWKDGVDVVCMRR  137
            V ++ ++RNFGKE+AL AG++HA+G AVI ID DLQDP E+IP+++  W+ G ++V  +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  138  RSRAGETWLKRCSAHHFYRLLNAISDVDIPPDAGDFRLLSRKAVYALQQLNERNRYMKGL  197
              R+ + +LKR +A+ FY+L N IS   I  + GDFRL+SR  V  ++ L ERN +MKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  198  FAWIGLPTAIIEYDRMPRAAGATKWDYLGLLNLAFQGITSFSTAPLRFAMGSGLLTALFG  257
            ++W+G  T ++EY R  R AG +K +   L NLA++GITSFST PLR     GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  258  VLFTLWIVIKALVLGDPVQGYPSLISMITILGGVQLLSIGLLGEYLGKTYYEAKQRPVYL  317
             L+  W++I +LV+G+PV+GYPSL+  I +LGGVQL++IG+LGEY+G+ Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  318  VRDVMR  323
            ++   +
Sbjct  301  LKKGRK  306

264) gtrB in NC_006834


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  215 bits (800),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 130/305 (43%), Positives = 222/305 (73%), Gaps = 1/305 (0%)

Query  35   HLTVVIAAFNEETSIPLLHPRLCAVLAQLHGLQTHVLYVDDGSTDGTWDVLHALTEADAN  94
             +++V++ FNEE +IP++   +   + +L   + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  95   VSAVRLSRNFGKELAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRSGYDNIFGTR  154
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  155  VFREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVEALQQLRERHRFMKGL  214
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VVE ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  215  FGWVGFRQVALPYRRAPRLSGNSKFTVWRLWNFALDGITSFSTVPlraatylglltalla  274
            ++WVG +   + Y RA R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  275  FVFGGWVVIKAALVGDPVAGWPTMMSVILFLGGMQLIALGLIGEYLGRLYDEAKQRPLYL  334
            F++G+W++I + + G+PV G P+++  ILFLGG+QLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  335  VDTHR  339
            +   R
Sbjct  301  LKKGR  305

265) XOO_1710 in NC_007705


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  215 bits (800),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 130/305 (43%), Positives = 222/305 (73%), Gaps = 1/305 (0%)

Query  15   HLTVVIAAFNEETSIPLLHPRLCAVLAQLHGLQTHVLYVDDGSTDGTWDVLHALTEADAN  74
             +++V++ FNEE +IP++   +   + +L   + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   VSAVRLSRNFGKELAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRSGYDNIFGTR  134
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  VFREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVEALQQLRERHRFMKGL  194
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VVE ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FGWVGFRQVALPYRRAPRLSGNSKFTVWRLWNFALDGITSFSTVPlraatylglltalla  254
            ++WVG +   + Y RA R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FVFGGWVVIKAALVGDPVAGWPTMMSVILFLGGMQLIALGLIGEYLGRLYDEAKQRPLYL  314
            F++G+W++I + + G+PV G P+++  ILFLGG+QLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  VDTHR  319
            +   R
Sbjct  301  LKKGR  305

266) PXO_01670 in NC_010717


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  215 bits (800),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 130/305 (43%), Positives = 222/305 (73%), Gaps = 1/305 (0%)

Query  15   HLTVVIAAFNEETSIPLLHPRLCAVLAQLHGLQTHVLYVDDGSTDGTWDVLHALTEADAN  74
             +++V++ FNEE +IP++   +   + +L   + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   VSAVRLSRNFGKELAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRSGYDNIFGTR  134
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  VFREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVEALQQLRERHRFMKGL  194
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VVE ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FGWVGFRQVALPYRRAPRLSGNSKFTVWRLWNFALDGITSFSTVPlraatylglltalla  254
            ++WVG +   + Y RA R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FVFGGWVVIKAALVGDPVAGWPTMMSVILFLGGMQLIALGLIGEYLGRLYDEAKQRPLYL  314
            F++G+W++I + + G+PV G P+++  ILFLGG+QLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  VDTHR  319
            +   R
Sbjct  301  LKKGR  305

267) HP15_3970 in NC_017506


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  214 bits (797),  Expect = 4e-57, Method: Compositional matrix adjust.
 Identities = 143/301 (48%), Positives = 216/301 (72%), Gaps = 4/301 (1%)

Query  2    LSIIIPVHNEADVIPTLLKRLDLVCRQLPGQVELLFVDDGSRD--DSVAQLLRASDRYTG  59
            +S+++PV NE + IP + K +       P +VE++F++DGS+D  +S+ + L  SD    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL--  60

Query  60   IRVVQLSRNFGKEAAVTAGLESARGDAVVLMDADLQDPPELIPRMVQAWQHGADVVLMKR  119
            +  + ++RNFGKE+A+ AGL+ A GDAV+ +D DLQDP E+IP++++ WQ GA++VL KR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  120  RSRAGESWLKRTTASIFYRLINHISDASIPVDTGDFRLMSRRTVDALNRLPERNRYLKGM  179
              R+ +++LKR TA  FY+L N IS + I  + GDFRLMSR  V+ ++ LPERN ++KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  180  FAWVGMPTVTLEFDRDPRLAGKTKWNYLKLMHLAMEGITSFSTRPLRialilglfaagag  239
            ++WVG  T  +E+ R  R+AG +K N  KL +LA+EGITSFST PLR+   +GLF A+ +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  240  glfgTWEVIRALAFGISTPGYASMIAMITFLSGVQLLCVGLLGEYVGRIYMETKQRPVFI  299
             L+G+W +I +L FG +  GY+S++  I FL+GVQL+ +G+LGEY+GRIY+ETK RP +I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  300  V  300
            +
Sbjct  301  L  301

268) Snov_4402 in NC_014217


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  214 bits (798),  Expect = 4e-57, Method: Compositional matrix adjust.
 Identities = 136/300 (46%), Positives = 208/300 (70%), Gaps = 1/300 (0%)

Query  12   ISVVVPVYNEASCLEALHARLSAVLDHHPDVQREFIFVDDGSRDGSFDMLVELGRRDPAV  71
            IS+VVPV+NE   +  +   +    +  P  + E++F++DGS+D++  ++  L+  DP V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  72   KALRFARNFGKESAMAAGLRAAVGDIVVLMDSDLQHPPEVIPQMIERWQDGAQMVIAVRR  131
             +L F+RNFGKE+A+ AGL  A GD V+ +D DLQ+P EVIP++IE+WQ GA+MV+A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  132  SRTTDPLGRRLFTRGFYHFFRALCEVDIPEGAGDFRLFDRRVVDAINALPERNRFMKGIT  191
             R+TD   +R  +  FY +   +    I E  GDFRL  R VV+ I+ LPERN FMKGI 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  192  SWVGFRQEEIEFEVAERAGGVSSFSTLRLLRYAIDGLSSFSMVPLRVWSLAGVilaglsg  251
            SWVG + + +E+  AER +G+S F+  +L   A++G++SFS  PLRVW+  G+++A++S 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  252  lygiyilgEVLVLGVRTPGFPTIMVSMLFVSGVQLISLGVIGEYVGRIFTEVKHRPLYLV  311
            LYG  ++ + LV+G    G+P+++VS+LF++GVQLI++GV+GEY+GRI+ E K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

269) Marme_1527 in NC_015276


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  214 bits (797),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 136/300 (46%), Positives = 210/300 (70%), Gaps = 2/300 (0%)

Query  22   VSIVVPFFNESKSIEACHNALVKVLDSLQT-HCEIVYIDDGSSDDSWRQVCSFRSQKHQI  80
            +S+VVP FNE  +I    ++ V+ ++ L+  + EIV+I+DGS D +   + ++      +
Sbjct  3    ISLVVPVFNEEEAIPVFYKT-VREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  81   SRIKLSRNFGKEAALSAGLKASNGRAAIPFDADLQDPPEYIPKMIDAWQAGADIVEMKRS  140
              + ++RNFGKE+AL AGL  ++G A IP+D DLQDP E IP +I+ WQAGA++V  KRS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  141  ERLGESTMKKTSAKLFYKILNLLSDIELSENVGDFRLLDKRVVDVINSLPERSRYMKGLL  200
            +R  ++ +K+ +A  FYK+ N +S   + ENVGDFRL+ + VV+ I+ LPER+ +MKG+L
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  201  SWPGFKRKTLLFNRNPRQTGESKWNYFALLHLAFEGITSFSIKPLRLATIAGVLTSFIAL  260
            SW G +   + + R  R +G SK N   L +LA+EGITSFS  PLR+ T  G++ + I++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  261  SYALITLFKTLIYGDPVAGYPTLEITMLFLGGVQLLCIGLLGEYIGRLFIESKQRPLYVI  320
             Y+   ++ TL++G+PV GYP+L +++LFLGGVQL+ IG+LGEYIGR+++E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

270) gtrB2 in NC_007971


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (792),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 140/304 (47%), Positives = 211/304 (70%), Gaps = 8/304 (2%)

Query  10   TVSVVVPIFNEEQVLPLFHARLGAVLGTLPYTSEVIYVDDGSRDRTLDVLRTIRGADEKV  69
             +S+VVP+FNEE+ +P+F   +       PY  E+++++DGS+D T  ++ ++  +D  V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   GIIELSRNFGKEAALTAGLDVACGDAVVVIDADLQDPPELIPTLINKWEQGFDVVYATRR  129
              + ++RNFGKE+AL AGLD A GDAV+ ID DLQDP E+IP LI+KW+ G ++V A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  TREGESFLKKATAHCFYRLMGKVSDIDIPADTGDFRLMSQRAVAAIGQLREQNRFMKGLY  189
             R  ++ LK+ TA+ FY+L  K+S   I  + GDFRLMS+  V  I  L E+N FMKG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWIGYRQTSILYDRDARASGKTKFNYRRLLKLAIDGVTGFSTIPLRIATSVGLIVAVPAF  249
            +W+G +   + Y R  R +G +KFN ++L +LA++G+T+FST+PLR+ T +GL+VA  +F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  ----WMALYTVGKTLLFGDPVRGYPSLMTVVlmlgglqlfflgilgEYVGRLFNEAKRRP  305
                WM +     TL+FG+PVRGYPSL+  +L LGG+QL+ +G+LGEY+GR++ E+K RP
Sbjct  242  LYGAWMII----DTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  306  LYLV  309
             Y++
Sbjct  298  KYIL  301

271) lp12_2470 in NC_016811


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (792),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 211/302 (70%), Gaps = 1/302 (0%)

Query  35   ISCVVPVFNEEVLIAEFIAALDKTLKSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  94
            IS VVPVFNEE  I+ F  ++        Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  95   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  153
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  154  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  213
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  214  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGMVVAALALI  273
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+ +  G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  274  YAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  333
            Y+AW+++ TL+FG    G ++++ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  334  EE  335
              
Sbjct  303  KG  304

272) yfdH in NC_018139


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (791),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 211/302 (70%), Gaps = 1/302 (0%)

Query  35   ISCVVPVFNEEVLIAEFIAALDKTLKSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  94
            IS VVPVFNEE  I+ F  ++        Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  95   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  153
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  154  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  213
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  214  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGMGVAAVALI  273
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+ +  G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  274  YAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  333
            Y+AW+++ TL+FG    G ++++ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  334  EE  335
              
Sbjct  303  KG  304

273) lpg2478 in NC_002942


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (792),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 211/302 (70%), Gaps = 1/302 (0%)

Query  35   ISCVVPVFNEEVLIAEFIAALDKTLKSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  94
            IS VVPVFNEE  I+ F  ++        Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  95   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  153
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  154  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  213
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  214  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGMVVAALALI  273
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+ +  G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  274  YAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  333
            Y+AW+++ TL+FG    G ++++ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  334  EE  335
              
Sbjct  303  KG  304

274) LP6_2507 in NC_021350


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (792),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 211/302 (70%), Gaps = 1/302 (0%)

Query  35   ISCVVPVFNEEVLIAEFIAALDKTLKSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  94
            IS VVPVFNEE  I+ F  ++        Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  95   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  153
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  154  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  213
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  214  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGMVVAALALI  273
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+ +  G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  274  YAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  333
            Y+AW+++ TL+FG    G ++++ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  334  EE  335
              
Sbjct  303  KG  304

275) PSTAA_1233 in NC_017532


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (794),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 131/275 (48%), Positives = 195/275 (71%), Gaps = 6/275 (2%)

Query  14   FQYEIVFVDDGSTDDSHRYLAGLAYTYPWVRLVKLSRNFGKEAATTAGLDHALGHAVIIM  73
            ++ EIVF++DGS D ++  + +LA + P V  + ++RNFGKE+A  AGLDHA G+AVI +
Sbjct  32   YEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPI  91

Query  74   DADLQDPPELIPLMVEAWRSGMDIVLMRRRSRNGEGALKRFCAYMFYRLLCRLSDVTIPE  133
            D DLQDP E+IP ++E W++G ++VL +R  R+ +G LKR  A  FY+L  ++S   I E
Sbjct  92   DVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEE  151

Query  134  DVGDFRLMSRRAIDALGRLRERNRYMKGLFAWIGLPTKIISFDREPRAAGDSK---WNFV  190
            +VGDFRLMSR  ++ +  L ERN +MKG+++W+G  T ++ + R  R AG SK   W+  
Sbjct  152  NVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWK--  209

Query  191  GLMRLAMEGLTSFSVSPLRCVTFLGLLTALGSAMYGALIVAKTLIIGSDVSGYPSLMAVM  250
             L  LA+EG+TSFS  PLR  T++GL+ A  S +YGA ++  TL++G+ V GYPSL+  +
Sbjct  210  -LWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSI  268

Query  251  TFIGGIQLLSIGLVGEYVGRIYLESKQRPIYLVEE  285
             F+GG+QL++IG++GEY+GRIYLE+K RP Y++  
Sbjct  269  LFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

276) wcaA in NC_014125


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (793),  Expect = 8e-57, Method: Compositional matrix adjust.
 Identities = 140/302 (47%), Positives = 212/302 (71%), Gaps = 1/302 (0%)

Query  11   ISCVVPVFNEEVLIAEFIAALDKTLKSISYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  70
            IS VVPVFNEE  I+ F  ++       +Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  71   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  129
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  189
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  190  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGMGVAALALI  249
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+ +  G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  250  YAAWIVLSTLIFGIETPGWATLVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  309
            Y+AW+++ TL+FG    G ++L+ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  310  EE  311
              
Sbjct  303  KG  304

277) LPC_2000 in NC_009494


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (793),  Expect = 8e-57, Method: Compositional matrix adjust.
 Identities = 140/302 (47%), Positives = 212/302 (71%), Gaps = 1/302 (0%)

Query  11   ISCVVPVFNEEVLIAEFIAALDKTLKSISYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  70
            IS VVPVFNEE  I+ F  ++       +Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  71   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  129
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  189
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  190  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGMGVAALALI  249
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+ +  G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  250  YAAWIVLSTLIFGIETPGWATLVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  309
            Y+AW+++ TL+FG    G ++L+ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  310  EE  311
              
Sbjct  303  KG  304

278) LPE509_00583 in NC_020521


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  213 bits (793),  Expect = 9e-57, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 211/302 (70%), Gaps = 1/302 (0%)

Query  11   ISCVVPVFNEEVLIAEFIAALDKTLKSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  70
            IS VVPVFNEE  I+ F  ++        Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  71   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  129
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  189
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  190  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGMVVAALALI  249
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+ +  G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  250  YAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  309
            Y+AW+++ TL+FG    G ++++ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  310  EE  311
              
Sbjct  303  KG  304

279) Cseg_0951 in NC_014100


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  212 bits (787),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 143/303 (48%), Positives = 215/303 (71%), Gaps = 0/303 (0%)

Query  22   KRLSIVAPCFNEQEVLDLFFARIEEELAKLGLDYEIVCVNDGSRDHTLAVLLAHHQRNPR  81
             ++S+V P FNE+E + +F+  + E       + EIV +NDGS+D T +++ A    +P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  82   IKVINLARNFGKETALSAGLDVTTGDMVVPIDVDLQDPPELIGQFVEAWEAGADVAYGVR  141
            +  ++++RNFGKE AL AGLD ++GD V+PIDVDLQDP E+I +++E W+AGA++  + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  142  VDRRADTPLKRFTAQGFYRAFNRLSDVDLPYNAGDFRLMDKRVVEVLRKLPERNRFMKGL  201
             DR +D  LKR TA+ FY+  N++S   +  N GDFRLM + VVE ++ LPERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  202  FAWVGFRQEAIPYARPERAAGTSSWRYWKLWNFALDGITSFSTAPIRVWSYvgliagvla  261
            ++WVG + + + Y R+ER AG S    WKLWN+AL+GITSFST P+RVW+Y+GL+ + ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  262  vgvagllvlrtllfgRDVPGYPSLMVVILMSFGLQMLAIGSLGEYVARIYQEVKGRPLYV  321
               ++ +++ TL+FG  V GYPSL+V IL   G+Q+++IG LGEY++RIY E K+RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  322  VMD  324
            +  
Sbjct  301  LKK  303

280) CAP2UW1_1386 in NC_013194


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  212 bits (790),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/303 (43%), Positives = 210/303 (70%), Gaps = 1/303 (0%)

Query  17   TVSCVIPAFNENENLRLLLPGLEAILRSQSSAWEIIVVDDGSTDGTADLMAAWVRAGGFR  76
             +S V+P FNE+E + ++   +  +   ++   EI+ ++DGS D+T  ++ A   ++ + 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  77   Y-LQLSRNFGKEAALSAGLNAAEGDVAICLDADLQHPPALIPQMLERWRAGADMVCAVRA  135
              L ++RNFGKE+AL AGL+ A GD  I +D DLQ+P  +IP+++E+W+AGA+MV A R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  136  SRDDESRIKRVGASLLYRILGSGNRIRIIADAGDFRLMDRTVVAALLRLPERTRFMKGLY  195
             R  ++R+KR  A  +Y++    +  +I  + GDFRLM R VV  +  LPER  FMKG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  196  AWVGFTTESIEYVPPERLHGPSRFSFLRLVTFAVDGITAFSTLPLRVLSLCGLVVALLAF  255
            +WVG  T+ +EYV +ER+ G S+F+  +L  +A++GIT+FST+PLRV +  GL VA ++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  256  MYGTYLIIEYLFVGNPVSGWTTIVTAMLFLSGVHLLGLGVIGAYISRIFDEVKQRPLYLL  315
            +YG+ +II+ L  GNPV G  +++ ++LFL+GV+L+G+GV+G YI+RI+ E K RP Y+L
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  316  RND  318
            +++
Sbjct  302  KKG  304

281) MAE_40030 in NC_010296


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 129/308 (42%), Positives = 212/308 (69%), Gaps = 11/308 (3%)

Query  2    LKYSLIVPIYNEEETIAELYRRVSAIMNNLDGAVELILVNDGSKDSSLKRLRELHKADSR  61
            +K SL+VP++NEEE+I+ +Y+ V  + +     VE++++NDGSKD++   +  L  +D+ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VCYISFARNFGHQAAVTAGLNFCRGQVIIVLDADLQDPPELIPQMIEKWQEGYQVVYAQR  121
            V  +SF+RNFG ++A+ AGL+   G+ +I +D DLQDP E+IP++IEKWQ G ++V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  122  TKRKQESWFKKLTAYLFYRLLKRLADVDIPADTGDFCLMDRQVVDLLNSLPERNRYIRGL  181
            + R  ++++K+ TA  FY+L ++++   I  + GDF LM R+VV+ ++ LPERN +++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  RAWIGFPQTAVKFERDARFAGEVKYTFSKSLSLAINSLVSFSRVPLRFATYLGLFSALIS  241
             +W+G     V + R  R AG  K+   K  +LA++++ SFS  PLR  TY+GLF A IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  LIMALLVLY--WRLQQP---DSPITGFATIMIAIFFLGSVQLISIGILGEYIGRIYEEVK  296
            +      LY  W + +    ++P+ G+++++++I+FLG+VQLI+IG+LGEYIGRIY E K
Sbjct  241  F------LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  GRPTYTIT  304
            +RP Y + 
Sbjct  295  SRPKYILK  302

282) lpl2398 in NC_006369


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  211 bits (785),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 211/302 (70%), Gaps = 1/302 (0%)

Query  11   ISCVVPVFNEEVLIAEFIAALDKTLRSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  70
            IS VVPVFNEE  I+ F  ++        Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  71   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  129
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  189
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  190  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGMGVAALALI  249
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+ +  G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  250  YAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  309
            Y+AW+++ TL+FG    G ++++ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  310  EE  311
              
Sbjct  303  KG  304

283) MRBBS_1961 in NC_018268


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  211 bits (784),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 136/303 (45%), Positives = 213/303 (71%), Gaps = 10/303 (3%)

Query  21   LSLVVPLFNERPMLPIFFD--RVLPVLAKLNLRWEVVLVddgsddgsAQYIRNVIERTPG  78
            +SLVVP+FNE   +P+F+   R +  L   ++  E+V+++DGS D++   I  +    P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  79   VRLIKLSRNFGKEAAMTAGLEHAKGDAVIVLDADLQDPPEQISAMVECWQSGVDVVLMQR  138
            V  + ++RNFGKE+A+ AGL+HA GDAVI +D DLQDP E I+ ++E WQ+G ++VL +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  139  RSRAGETAFKRWSAHLFYRLLNRTSRTIIPVDTGDFRLMSRKAVNALLGLKERNRYMKGL  198
              R+ +  +KR +A+ FY+L N+ S   I  + GDFRLMSR  V+ +  L ERN +MKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  199  FAWIGMPTQVIQYDREPRVAGETKWDYPG--LVGLALEGLTSFSISPLR-WATVIGLIAA  255
            ++W+G  T+V++Y R  RVAG +K  + G  L  LALEG+TSFS  PLR W T IGL+ A
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISK--FNGWKLWNLALEGITSFSTFPLRVW-TYIGLFVA  237

Query  256  TMGAVFGLWIVVKAIMLGDATSGYPSLVAIISFLGGIQLMSVGIVGEYVGKTYMESKQRP  315
            +++ ++G W+++ ++++G++  GYPSL+  I FLGG+QL+++G++GEY+G+ Y+E+K RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  316  VYL  318
             Y+
Sbjct  298  KYI  300

284) gtrB in NC_017067


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  210 bits (783),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 133/267 (50%), Positives = 196/267 (74%), Gaps = 0/267 (0%)

Query  21   ELLFVDDGSRDDSVAILMAARQRQPEIRVLQLSRNFGKEAAVSAGLEHARGEAVVLMDAD  80
            E++F++DGS+D + +I+ A    +P +  L ++RNFGKE+A+ AGL+HA G+AV+ +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  81   LQDPPELIPDMLAEWRKGADVVLMKRRSRAGESWLKRITASLFYRLINRISDSPIPVDTG  140
            LQDP E+IP+++  W+ GA++VL KR  R+ +++LKR TA  FY+L N+IS + I  + G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  141  DFRLMSRRTVEALNRLPERNRYLKGMFAWVGMPTVTLEFDRDPRIAGSTKWNYLKLVHLA  200
            DFRLMSR  VE ++ LPERN ++KG+++WVG  T  +E+ R  R+AG +K N  KL +LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  201  MEGITSFSTRPLRlalvlgllaagaggtvglWEVIRALAFGISTPGYASLIAMITFLSGV  260
            +EGITSFST PLR+   +GL+ A+ +   G W +I +L FG +  GY+SL+  I FL+GV
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  261  QLLCVGLLGEYIGRIYMETKQRPVFIV  287
            QL+ +G+LGEYIGRIY+ETK RP +I+
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYIL  301

285) Rcas_0800 in NC_009767


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  210 bits (781),  Expect = 8e-56, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 204/302 (68%), Gaps = 1/302 (0%)

Query  61   HLSVVMPVFNERENLPALYERLTRVLNAEGQQYELVFVDDGSRDGSRDVLLTLAARDPRV  120
             +S+V+PVFNE E +P +Y  +    +    + E+VF++DGS+D++  ++ +LA  DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  121  VVVELARNFGHQIAISAGLDHARGDGVIVMDSDLQDPPEVLPQFIARWREGYDVVYAVRA  180
            V + ++RNFG + A+ AGLDHA GD+VI +D DLQDP EV+P++I +W+ G ++V A R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  181  -RRKENLLLRVAYAFFYRMLRRIANIDIPLDAGDFCLMDRRVVDILTAMPERNRFVRGIR  239
             R  +  L R +   FY++  +I+   I  + GDF LM R VV+ +  +PERN F++GI 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  240  SWVGMRQIGLPYDRQGRHAGKPKYTLSRLTYLALDGIVSFSFVPLRIITMLGFLVSTISI  299
            SWVG +   + Y R  R AG +K+   +L  LAL+GI SFS  PLR+ T +G++V++IS+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  300  ALAIVYAVQRIAFGLTPPGFPTLIVAIFFLSGIQLITIGVIGEYVGRIFEEVKQRPLYVV  359
              +    ++ + FG    G+P+L+V+I+FL+G+QLI IGV+GEY+GRI+ E K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  360  RR  361
            ++
Sbjct  302  KK  303

286) Bind_1650 in NC_010581


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  210 bits (780),  Expect = 9e-56, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 205/300 (69%), Gaps = 0/300 (0%)

Query  17   LSIIVPVFNEAENICPFLGRLTPILTSCTRSHEIIFVDDGSRDETLKILHAAHEADHTVG  76
            +S++VPVFNE E I  F   +  +        EI+F++DGS+D T  I++A   +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   IVSLSRNFGKEIAIAAGLDHARGEASVILDADLQHPPEMIATFVKFWRQGYKNVYGQRID  136
             +S++RNFGKE A+ AGLDHA G+A + +D DLQ+P E+I+ ++  W+ G   V ++R D
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RKADSPLRRMLTHRFYKLFGQFGETRLPEGAGDFRLLDAQAVKALLQMREHARFSKGLYA  196
            R +D+ L+R  +++FYKL  +++  ++ E  GDFRL+  + V  +  + E+  F KG+ +
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WIGFKSIGVPFHVEDRAYGVSKFSYRKLTRFALDGLMSFSTLPLEVWTYLGTFISLLALA  256
            W+G ++  V +   +R  G+SKF+ +KL  +AL+G+ SFST+PL VWTY+G F++ +++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  257  AAVYFIGETLVLGVSVPGYASLIVSITFFAGVQLLSLGILGEYIGRIFTEVKRRPLYLVQ  316
             +   I +TLV+G +V GY+SL+VSI F++GVQL+++G+LGEYIGRI+ E K RP Y+++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

287) Emin_0341 in NC_010644


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (779),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 141/301 (47%), Positives = 211/301 (71%), Gaps = 1/301 (0%)

Query  4    ISLIIPVMNEEKNVGLLLEKLEAIMPAAKKTYEYLFIEGGSEDSTLNILQEKAKTIPQIK  63
            ISL++PV NEE  + ++   +  +        E +FI++GS D+T +I++  A + P + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   IISLSKSFGKEASLLCGFDYAQGKAAIPIDADLQDPPEIIPEFIKKWEEGNQMVYGVRKI  123
             +S++++FGKE++L+ G+D A G A IPID DLQDP E+IP++I KW+ G +MV + R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  R-KDSFLKNTLSSFFYKIYNLISDYPIPYNAGDYRLLDRSVIEALKNCRERNLFMKGLFG  182
            R  D+ LK   +  FYK+ N IS   I  N GD+RL+ R V+E +K   ERNLFMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  183  WVGFKTDSIEFDRPKRNAGNTGLPYKKLWNLALDGIFSASTLPLRIWTYLGaiiaifsaf  242
            WVG +TD +E+ R+ R AG + +   KLWNLAL+GI S ST+PLR+WTY+G ++A +S +
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  243  yaffiiTKTLILGKDTPGYASLAVLILFFGALQMISVGILGEYIGRIYKETKQRPNYIID  302
            Y+  +I  TL++G+   GY+SL V ILF+G++Q+I++G+LGEYIGRIY ETK RP+YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  303  K  303
            K
Sbjct  303  K  303

288) yfdH in NC_018140


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (779),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 211/302 (70%), Gaps = 1/302 (0%)

Query  35   ISCVVPVFNEEVLIAEFIAALDKTLKSIAYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  94
            IS VVPVFNEE  I+ F  ++       +Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  95   -IRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  153
             + F+RNFGKE AL AGLDHA GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  154  RSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYS  213
            RS +++LKR  A  FY L +KI+  +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  214  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMIFLGGMGVAALALV  273
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+    G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  274  YATWIVLSTLIFGIKTPGWASIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  333
            Y++W+++ TL+FG    G +S++ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  334  EE  335
              
Sbjct  303  KG  304

289) lpp2543 in NC_006368


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (777),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 138/302 (46%), Positives = 209/302 (70%), Gaps = 1/302 (0%)

Query  11   ISCVVPVFNEEILIAEFIAALDKTLKSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRC  70
            IS VVPVFNEE  I+ F  ++        Y  EI++I+DGS+D T +II++L    +L  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  71   -IRFSRNFGKEKALSAGLDHTRGDAVILMDSDFQHPLELLSEFIAKWEDGYDMVYAVRQN  129
             + F+RNFGKE AL AGLDH+ GDAVI +D D+Q+P+E+++++I KW+ G +MV A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  RSDESWLKRVCAKIFYHLTSKIKRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGVYS  189
            RS +++LKR  A  FY L +KI   +I  N GDFRL+ R +V+ ++ LPERN FMKG+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  190  WVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMIFLGGMGVAALALV  249
            WVG +   V +    R +G S+ +   L +LA+ GITSF++FPLR+    G+ VA+++++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  250  YATWIVLSTLIFGIKTPGWASIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIID  309
            Y++W+++ TL+FG    G +S++ +I F+GG+QL++IGV+GEYIGR++ E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  310  EE  311
              
Sbjct  303  KG  304

290) HEAR2596 in NC_009138


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (779),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 134/304 (45%), Positives = 212/304 (70%), Gaps = 5/304 (1%)

Query  17   ISCVIPAYNEAAHLAAFLRDLRAI--LATFAARYEIIVVNDGSKDNTDEVMAPLLKEAGL  74
            IS V+P +NE   ++ F + +R +  L  +    EI+ +NDGSKD T+ ++ +L     L
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  75   RY-ISFSRNFGKEAALSAGIDAAQGDAVILLDGDYQHPLELLPEMVRLWQGGIDMVYGVI  133
               +SF+RNFGKE+AL AG+D A GDAVI +D D Q+P+E++P+++  WQ+G +MV +  
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  134  SDRSNESRLKRWGTGMFYHLMESGAPITIPRNAGDFRLMDRQVVHALRQLPERNRFMKGL  193
            SDRS ++RLKR  +  FY L +  +   I  N GDFRLM R+VV+ ++ LPERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  194  YAWVGFSSIALPFVPNERATGVSSFSYRSLSRLALAGVTAFTTLPLRiwsgigvvisiia  253
             +WVG  +  + +V  ER +G+S F+ + L  LAL G+T+F+T+PLR+W+ IG+ ++ I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  254  iLYAFWIAGEAILFGNDVPGWSTLAAGLMFFSGIQLISIGVLGEYMGRVYEEVKKRPLYV  313
            +LY+ W+  ++++FGN V G ++L  +++F++G+QLI+IGVLGEY+GR+Y E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  314  VAHD  317
            +  +
Sbjct  301  LKKG  304

291) Rfer_0771 in NC_007908


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (778),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 123/302 (41%), Positives = 201/302 (67%), Gaps = 0/302 (0%)

Query  10   SISCVIPAFNEASNLGTVLPQILATLSILSQRVELVVVDDGSRDDTTQVMQALCAVHPEI  69
             IS V+P FNE   +      +     + +  VE+V ++DGS+D T  +++AL   +P +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  70   LYIKLSRNFGKEPALTAGIDAARGEVVVLMDADGQHPVSLLPEMFKKWQQGSDVVYAVRK  129
            + + ++RNFGKEPAL AG+D A G+ V+ +D D Q+P+ ++P+++ KWQ G+++V A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  130  TRDDQSGLQSSLTGLFYKMVNFGNRVKIPANAGDFRLMDRMVVDALKSLPERNRFMKGLY  189
             R  ++ L+   +  FYK+ N  +  KI  N GDFRLM R VV+ +K LPERN FMKG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  190  AWVGFNSTAIDYQPLPRADGKSNFGLRGSLSLALTGILAFSIAPLRALTATGLVLSALAL  249
            +WVG ++  ++Y    R  G S+F  +   +LAL GI +FS  PLR  T  GL ++++++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  250  GYGAWVVGDYFISGIAVPGYATIVVGMMFFSGIQLLSIGVLAEYVGRIYEEVKQRPPYLI  309
             YGAW++ D ++ G +V GY++++V+++F++G+QL++IGVL+EY+GRIY E K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  310  SQ  311
             +
Sbjct  302  KK  303

292) HMPREF0833_10292 in NC_015678


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (776),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 140/305 (46%), Positives = 208/305 (69%), Gaps = 4/305 (1%)

Query  1    MTISVVVPCFNEEESIPLFYREMERVRMKMGEKFEYIFINDGSSDGTLSVLRRLHVTDSN  60
            M IS+VVP FNEEE+IP+FY+ +   +       E +FINDGS D+T S++  L V+D+ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VHYLSFSRNFGKEAALYAGLERASGEYVTVMDVDLQDPPELLIEMKQKLEEQPDLDCVGT  120
            V  LSF+RNFGKE+AL+AGL++ASG+ V  +DVDLQDP E++ ++ +K +  +++  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRVTRDGEPPIRSFFARMFYKLINHISQVEMVDGARDFRLMRRPMVDAIMELSEYNRFSK  180
            +R  R  +  ++   A  FYKL N IS   + +   DFRLM R +V+ I  L+E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFETEYLEYKNVERVAGETSWNFWSLFKYSIEGIVNFSDAPLNI-AFIGGLLSW  239
            GI++WVG +T+ +EY   ERVAG +  N W L + ++EGI +FS  PL + ++IG +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA-  237

Query  240  ILAFVMMVLIVIRTLVFGDPTSGWPSLMTVILFLGGFQLLTIGILGKYIGKIFMETKKRP  299
             ++F+    ++I TLVFG+P  G PSL+  ILFLGG QL+ IG+LG YIG+I++ETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  IYVIK  304
             Y++K
Sbjct  298  KYILK  302

293) Tmz1t_3637 in NC_011662


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (776),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 137/306 (45%), Positives = 220/306 (72%), Gaps = 7/306 (2%)

Query  22   RLSVVVPLYNEGETVEALHRRLSQVLAALELSDWEIVCVDDGSRDDTYARVAALCAGDPH  81
            ++S+VVP++NE E++  + + + + +  L   + EIV ++DGS+D T + + AL  +DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  82   LKAIRFARNFgkeaamaaglqaaggDVIVLMDGDLQHPPELIPEMLARWRGGAMMVTAVR  141
            + ++ F+RNFGKE+A+ AGL+ A+GD ++ +D DLQ+P E+IP+++ +W++GA MV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  142  RSRVTDPWLRRKLTRGFYAFFSKVSEVELAEGGGDFRVFDRAVVDAINSLPERTRFMKGI  201
              R TD +L+RK +  FY + +K+S   + E  GDFR+  R VV+ I+ LPER  FMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  202  TSWVGFRQEVVEFEPAQRAGGVS---GWSMLRLLRYAIDGLSAFSTLPLRVWSVIGLMMA  258
             SWVG + +VVE+  A+R +G+S   GW +  L   A++G+++FST+PLRVW+ IGL +A
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  259  GLSGLYGLFLVLRTMLFGIDLPGYVSLMVSGLFMSGIQLISLGVLGEYVGRIFTEVKGRP  318
            ++S LYG  +++ T++FG  + GY SL+VS LF++G+QLI++GVLGEY+GRI+ E K+RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  319  LFLVSE  324
             +++  
Sbjct  298  KYILKK  303

294) PCC7424_2872 in NC_011729


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (776),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 132/305 (44%), Positives = 206/305 (68%), Gaps = 7/305 (2%)

Query  8    IKYSLIIPIYNEEEIILEMYRRVSAIMAQLDESVELILINDGSRDNSLNLIRDLHTRDPR  67
            +K SL++P++NEEE I   Y+ V  +       VE+++INDGS+D + ++I  L   DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  68   VCYLSFARNFGHQIAVTAGLNFARGQAIIILDADLQDPPELIPTLIQKWQQGYEVVYAQR  127
            V  LSF+RNFG + A+ AGL+ A G+A+I +D DLQDP E+IP LI+KWQ G E+V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  128  LKRKNEGWFKRLTAYVFYRILRRLADVDIPSDTGDFCLMDRKVVDLLNAMPEQNRYIRGL  187
              R  +G++KR TA  FY++  +++   I  + GDF LM R VV+ ++ +PE+N +++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  188  RAWVGFRQTAVEFEREPRFAGEVKYTFSKSFSLALNSLISFSKVPLRLSSYLGLLSAGVA  247
             +WVG +   VE+ R  R AG  K+   K  +LAL+++ SFS  PLR+ +Y+GL+ A+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  248  LLMAILVLYWRLYQP---NSPVTGLATIMIAIFFLGSVQLICLGILGEYIGRIYEEIKGR  304
            +L +     W + +     +PV G ++++++I+FLG+VQLI +G+LGEYIGRIY E K+R
Sbjct  241  FLYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  305  PLYTL  309
            P Y L
Sbjct  297  PKYIL  301

295) Mnod_5901 in NC_011894


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  209 bits (776),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 130/302 (44%), Positives = 207/302 (69%), Gaps = 2/302 (0%)

Query  10   IDLSVVIPVYNESANVGPLLARLLPVLERITP-AFEVVFVNDGSHDATAAVIAEHNAREP  68
            + +S+V+PV+NE   + P++ + +  ++ + P   E+VF+NDGS DAT ++I      +P
Sbjct  1    MKISLVVPVFNEEEAI-PVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  69   RIGAVCFSRNFGKEVAIAAGLDHARGRAVVLMDADLQHPPELIETFVARWREGNVMVYAQ  128
             + ++ F+RNFGKE A+ AGLDHA G AV+ +D DLQ+P E+I  ++ +W+ G  MV A+
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  129  RLDRSGESALRRSFAQLFYRLFAQFGEMPLPEGAGDFRLIDRKGVEVLRALPERARFSKG  188
            R DRS ++ L+R  A+ FY+L  +++   + E  GDFRL+ R  VE ++ LPER  F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  189  LYSWIGFRSVGVPYAVEARHQGETKWSFRKLFRFAFDGITSFSTVPLRVWTYLGGTIatl  248
            + SW+G ++  V Y    R  G +K + +KL  +A++GITSFST PLRVWTY+G  +A++
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  249  allaalYFVGEYLFRGPNVPGYASLIVSVMFFSGVQLMSLGIIGEYIGRIFAEVKRRPLY  308
            ++L +   + + L  G  V GY+SL+VS++F++GVQL+++G++GEYIGRI+ E K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  309  VV  310
            ++
Sbjct  300  IL  301

296) Cyan7822_3107 in NC_014501


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  208 bits (775),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 207/305 (68%), Gaps = 7/305 (2%)

Query  8    VKYSLIIPIYNEEEIISEMYRRVSAVMERLDDTVELVLINDGSRDNSLNLMRELHLCDPR  67
            +K SL++P++NEEE I+  Y+ V    E     VE+V+INDGS+D + +++  L + DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  68   VCYLSFARNFGHQIAVTAGLNFARGQVVVILDADLQDPPELIPKMIEKWQQGYQVVYAQR  127
            V  LSF+RNFG + A+ AGL+ A G+ V+ +D DLQDP E+IP +IEKWQ G ++V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  128  VKRKQESWFKRLSAYIFYRLLRRLADVDIPADTGDFCLMDRQVVDLLNAMPERNRYIRGL  187
              R  ++++KR +A  FY+L  +++   I  + GDF LM R+VV+ ++ +PERN +++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  188  RAWVGFRQTAIAFEREPRFAGEVKYTFSKSLSLAINSLISFSKVPLRLSSYLGLLSAGVA  247
             +WVG +   + + R  R AG  K+   K  +LA++++ SFS  PLR+ +Y+GL+ A+++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  248  LLMAILVLYWRLYEP---HSPVTGLATIMIAIFFLGSVQLICLGILGEYIGRIYEEIKGR  304
            +L +     W + +     +PV G ++++++I+FLG+VQLI +G+LGEYIGRIY E K+R
Sbjct  241  FLYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  305  PLYTL  309
            P Y L
Sbjct  297  PKYIL  301

297) ANT_04660 in NC_014960


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  208 bits (773),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 212/301 (71%), Gaps = 0/301 (0%)

Query  6    SIIAPIFNEHDSLPELHRRVSAVMDGLGEPWELILVDDGSSDGSTDLIRQLAEQDERVRP  65
            S++ P+FNE++++P + + V    +      E+++++DGS D++  +I  LA  D  V P
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  66   VIFARNFGHQIAVTAGLDYARGDAVVIIDADLQDPPEVIPDLVARWREGYEVVYAVRTER  125
            + F+RNFG + A+ AGLD A GDAV+ ID DLQDP EVIP+L+ +W+ G E+V A R++R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  126  EGESWFKLFTASLFYRIIFRITDVKIPMDTGDFRLLDRKVVNVLKTMRERHRFLRGMAAW  185
              ++++K  TA  FY++  +I+  KI  + GDFRL+ R VV+ +K + ER+ F++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  186  VGFRQIGVPYKRAARFAGSTKYPFKKMLRLALTAITGFSYFPLQVATYLGFISAGLALIF  245
            VG +   V Y RA R AG +K+   K+  LAL +IT+FS FPL+V TY+G++ A++++++
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  246  IPIVVIERLVGNQAFFGQATTLVSVLFLGGVQLISLGILGEYIGRIYDEVKGRPLYIVRE  305
             + ++I+ LV  ++  G ++ LVS+LFLGGVQLI++G+LGEYIGRIY E K+RP YI++ 
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  306  A  306
            +
Sbjct  304  G  304

298) mnaA1 in NC_015391


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  208 bits (772),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 133/311 (43%), Positives = 213/311 (69%), Gaps = 9/311 (2%)

Query  17   KLSLVVPCYNEEQTIPLFFAAVEKIRPTLANISIEYIFVNDGSKDQTLTVLRKMALKYPD  76
            K+SLVVP +NEE++IP+F+ +V  ++  L    +E +F+NDGSKD T +++  +A+  P 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQ-ELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  77   AIRYLSFSRNFGKEAALFAGLEHATGDYVAVMDVDLQDPPELLPQMLNLIRQEKYDCVGT  136
             +  LSF+RNFGKE+ALFAGL+HA+GD V  +DVDLQDP E++P++++  +Q   + V +
Sbjct  61   VVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIE-KWQAGAEMVLA  118

Query  137  RRVSRKGEPAIRSFLAKEFYRLMNRISAVEFVDGARDYRLMTRQMVEAILSMTEVNRFSK  196
            +R  R  +  ++   A  FY+L N+IS+  + +   D+RLM+R++VE I  + E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  197  GIFSWVGFDTTYLEYENKERAAGKT---SWSLWSLFKYSLDAIVDFSDIPLAIASFVGLF  253
            GI+SWVG +T  +EY   ER AG +   +W LW+L   +L++I  FS +PL + +++GLF
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLF  235

Query  254  SFFIALFFMVVIVIRTVLFDDPTAGWPSLVTIILAIGGLQLFCLGIVGKYLGKTYLESKK  313
               I++++   ++I T++F++P  G PSL+  IL +GG+QL+ +G++G Y+G+ YLE+K 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  314  RPIYILKETDK  324
            RP YILK   K
Sbjct  296  RPKYILKKGRK  306

299) XAC29_15500 in NC_020800


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  208 bits (772),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 131/305 (43%), Positives = 223/305 (74%), Gaps = 1/305 (0%)

Query  15   RLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHALTEADAQ  74
            +++++++ FNEE +IP++   +   + +L + + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   VSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTR  134
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  VIREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  194
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPlraatylglltalla  254
            ++WVG +   + Y R  R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  flfgaWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYL  314
            FL+GAW++I + + G+PV G P+L+  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  VDTHR  319
            +   R
Sbjct  301  LKKGR  305

300) wcaA in NC_020815


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  208 bits (772),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 131/305 (43%), Positives = 223/305 (74%), Gaps = 1/305 (0%)

Query  15   RLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHALTEADAQ  74
            +++++++ FNEE +IP++   +   + +L + + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   VSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTR  134
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  VIREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  194
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPlraatylglltalla  254
            ++WVG +   + Y R  R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  flfgaWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYL  314
            FL+GAW++I + + G+PV G P+L+  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  VDTHR  319
            +   R
Sbjct  301  LKKGR  305

301) BVU_1076 in NC_009614


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  208 bits (772),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 211/300 (71%), Gaps = 1/300 (0%)

Query  3    KVTLLIPVYNEEAMLPTLYQRLIELVNRNAVYEWEILFVNDGSSDTTLECLRRLRQQDKR  62
            K++L++PV+NEE  +P +Y+ + E+ + ++ YE EI+F+NDGS D+T   +  L   D  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  63   VNYVNLSRNFGKEVAMLAGFDYATGDCCVVMDADLQDPPELVDQMLEYWEEGYDDIYAKR  122
            V  ++++RNFGKE A++AG+D A+GD  + +D DLQDP E++ +++E W+ G + + AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  123  RTRGEESWLRRQFSLAFYGILQRMSRIDILPNVGDFRLLDRRCVLTLRRLRECERYTKGL  182
              R+ +++L+R+ +  FY + +++S   I  NVGDFRL+ R  V  ++ L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  183  FCWIGYQKKSIEFDRGDRLMGHSSWNFLKLLNLAVEGITSFSIAPLRIATVCGVLCSISS  242
            + W+G Q   +E+ R++R+ G S  N  KL NLA+EGITSFS  PLR+ T  G++ +  S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  243  FIYAIYFLIKTVLYGDETAGFPTLIIVMLFLGGIQLFSLGIIGEYVGRIFKETKGRPTYI  302
            F+Y+   +I T+++G+   G+P+L++ +LFLGG+QL+++G++GEY+GRI+ ETK+RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

302) CV_1160 in NC_005085


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (771),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 128/302 (43%), Positives = 202/302 (67%), Gaps = 3/302 (0%)

Query  26   VSCLIPAYNESENIVPMLETLHRLLSAHGYRHELVVVDDGSRD--DTVPKALEAAKRLPV  83
            +S ++P +NE E I     T++ +     Y  E+V ++DGS+D  +++ +AL  +  L V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  84   TLIQLSRNFGKEIALTAGIDNIGGDVAVLIDGDFQHPPEMVPVFLAKWREGYDMVYSVRA  143
             L  ++RNFGKE AL AG+D+ +GD  + ID D+Q+P E++P ++ KW+ G +MV + R+
Sbjct  63   PL-SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  144  NRDGETLAKRAFTRVFYALLNSGAPLKIPENTQDFRVLDKSILEALRRMPERNRFMKGLY  203
            +R  +   KR  +  FY L N  +  KI EN  DFR++ + ++E ++ +PERN FMKG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  204  NWVGFTQLAMETQTRERRAGKSSFNFRSLFNLGLTGLTAFSNMPLRIWTLVGCVISLLSI  263
            +WVG     +E    ER AG S FN + L NL+L G+T+FS  PLR+WT +G  ++ +S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  264  GYAIWELVHTLLFGNPVSGWPTLAVAVTFLGGVQLLSIGILGEYVGRIFNEVKGRPTYLI  323
             Y+ W +++TL+FGNPV G P+L V++ FLGGVQL++IG+LGEY+GRI+ E K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  324  SR  325
             +
Sbjct  302  KK  303

303) sll0501 in NC_017038


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (770),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 143/303 (48%), Positives = 216/303 (72%), Gaps = 4/303 (1%)

Query  3    IELSIVIPMYNEEDNLEHLF--ARLLEVLTPLKITYEIICVNDGSKDKTLKQLIDCYQSN  60
            + +S+V+P++NEE+ +  ++   R ++ L P  +  EI+ +NDGSKD T   +     S+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  61   RQIKIVNLSRNFGKEIALSAGIDYAQGNAVIPIDADLQDPPELIHELVDKWREGYDIVYA  120
              +  ++++RNFGKE AL AG+D A G+AVIPID DLQDP E+I +L++KW+ G ++V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  121  TRRSRQGETWVKQFTAKMFYKVIGRMTEIKIPPNTGDFRLMDRKVVNAIKQLPERTRFMK  180
             R  R  + ++K+ TA  FYK+  +++  KI  N GDFRLM R VV+ IK LPER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GLFAWVGYRQTFVLFDREPRFQGQTKWNYWKLWNFALDGIFSFSLLPLKVWTylgsiisl  240
            G+++WVG +   V + R  R  G +K N WKLWN+AL+GI SFS +PL+VWTY+G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  241  lslayasflilKTITLGVDVPGYASLMVAILFLGGVQLISLGVIGEYLGRVYEEVKARPL  300
            +S+ Y++ +I+ T+ +G  V GY+SL+V+ILFLGGVQLI++GV+GEY+GR+Y E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  301  YLV  303
            Y++
Sbjct  299  YIL  301

304) sll0501 in NC_017052


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (770),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 143/303 (48%), Positives = 216/303 (72%), Gaps = 4/303 (1%)

Query  3    IELSIVIPMYNEEDNLEHLF--ARLLEVLTPLKITYEIICVNDGSKDKTLKQLIDCYQSN  60
            + +S+V+P++NEE+ +  ++   R ++ L P  +  EI+ +NDGSKD T   +     S+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  61   RQIKIVNLSRNFGKEIALSAGIDYAQGNAVIPIDADLQDPPELIHELVDKWREGYDIVYA  120
              +  ++++RNFGKE AL AG+D A G+AVIPID DLQDP E+I +L++KW+ G ++V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  121  TRRSRQGETWVKQFTAKMFYKVIGRMTEIKIPPNTGDFRLMDRKVVNAIKQLPERTRFMK  180
             R  R  + ++K+ TA  FYK+  +++  KI  N GDFRLM R VV+ IK LPER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GLFAWVGYRQTFVLFDREPRFQGQTKWNYWKLWNFALDGIFSFSLLPLKVWTylgsiisl  240
            G+++WVG +   V + R  R  G +K N WKLWN+AL+GI SFS +PL+VWTY+G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  241  lslayasflilKTITLGVDVPGYASLMVAILFLGGVQLISLGVIGEYLGRVYEEVKARPL  300
            +S+ Y++ +I+ T+ +G  V GY+SL+V+ILFLGGVQLI++GV+GEY+GR+Y E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  301  YLV  303
            Y++
Sbjct  299  YIL  301

305) sll0501 in NC_017039


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (770),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 143/303 (48%), Positives = 216/303 (72%), Gaps = 4/303 (1%)

Query  3    IELSIVIPMYNEEDNLEHLF--ARLLEVLTPLKITYEIICVNDGSKDKTLKQLIDCYQSN  60
            + +S+V+P++NEE+ +  ++   R ++ L P  +  EI+ +NDGSKD T   +     S+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  61   RQIKIVNLSRNFGKEIALSAGIDYAQGNAVIPIDADLQDPPELIHELVDKWREGYDIVYA  120
              +  ++++RNFGKE AL AG+D A G+AVIPID DLQDP E+I +L++KW+ G ++V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  121  TRRSRQGETWVKQFTAKMFYKVIGRMTEIKIPPNTGDFRLMDRKVVNAIKQLPERTRFMK  180
             R  R  + ++K+ TA  FYK+  +++  KI  N GDFRLM R VV+ IK LPER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GLFAWVGYRQTFVLFDREPRFQGQTKWNYWKLWNFALDGIFSFSLLPLKVWTylgsiisl  240
            G+++WVG +   V + R  R  G +K N WKLWN+AL+GI SFS +PL+VWTY+G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  241  lslayasflilKTITLGVDVPGYASLMVAILFLGGVQLISLGVIGEYLGRVYEEVKARPL  300
            +S+ Y++ +I+ T+ +G  V GY+SL+V+ILFLGGVQLI++GV+GEY+GR+Y E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  301  YLV  303
            Y++
Sbjct  299  YIL  301

306) sll0501 in NC_017277


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (770),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 143/303 (48%), Positives = 216/303 (72%), Gaps = 4/303 (1%)

Query  3    IELSIVIPMYNEEDNLEHLF--ARLLEVLTPLKITYEIICVNDGSKDKTLKQLIDCYQSN  60
            + +S+V+P++NEE+ +  ++   R ++ L P  +  EI+ +NDGSKD T   +     S+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  61   RQIKIVNLSRNFGKEIALSAGIDYAQGNAVIPIDADLQDPPELIHELVDKWREGYDIVYA  120
              +  ++++RNFGKE AL AG+D A G+AVIPID DLQDP E+I +L++KW+ G ++V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  121  TRRSRQGETWVKQFTAKMFYKVIGRMTEIKIPPNTGDFRLMDRKVVNAIKQLPERTRFMK  180
             R  R  + ++K+ TA  FYK+  +++  KI  N GDFRLM R VV+ IK LPER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GLFAWVGYRQTFVLFDREPRFQGQTKWNYWKLWNFALDGIFSFSLLPLKVWTylgsiisl  240
            G+++WVG +   V + R  R  G +K N WKLWN+AL+GI SFS +PL+VWTY+G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  241  lslayasflilKTITLGVDVPGYASLMVAILFLGGVQLISLGVIGEYLGRVYEEVKARPL  300
            +S+ Y++ +I+ T+ +G  V GY+SL+V+ILFLGGVQLI++GV+GEY+GR+Y E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  301  YLV  303
            Y++
Sbjct  299  YIL  301

307) MYO_128970 in NC_020286


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (770),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 143/303 (48%), Positives = 216/303 (72%), Gaps = 4/303 (1%)

Query  3    IELSIVIPMYNEEDNLEHLF--ARLLEVLTPLKITYEIICVNDGSKDKTLKQLIDCYQSN  60
            + +S+V+P++NEE+ +  ++   R ++ L P  +  EI+ +NDGSKD T   +     S+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  61   RQIKIVNLSRNFGKEIALSAGIDYAQGNAVIPIDADLQDPPELIHELVDKWREGYDIVYA  120
              +  ++++RNFGKE AL AG+D A G+AVIPID DLQDP E+I +L++KW+ G ++V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  121  TRRSRQGETWVKQFTAKMFYKVIGRMTEIKIPPNTGDFRLMDRKVVNAIKQLPERTRFMK  180
             R  R  + ++K+ TA  FYK+  +++  KI  N GDFRLM R VV+ IK LPER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GLFAWVGYRQTFVLFDREPRFQGQTKWNYWKLWNFALDGIFSFSLLPLKVWTylgsiisl  240
            G+++WVG +   V + R  R  G +K N WKLWN+AL+GI SFS +PL+VWTY+G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  241  lslayasflilKTITLGVDVPGYASLMVAILFLGGVQLISLGVIGEYLGRVYEEVKARPL  300
            +S+ Y++ +I+ T+ +G  V GY+SL+V+ILFLGGVQLI++GV+GEY+GR+Y E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  301  YLV  303
            Y++
Sbjct  299  YIL  301

308) sll0501 in NC_000911


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (770),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 143/303 (48%), Positives = 216/303 (72%), Gaps = 4/303 (1%)

Query  3    IELSIVIPMYNEEDNLEHLF--ARLLEVLTPLKITYEIICVNDGSKDKTLKQLIDCYQSN  60
            + +S+V+P++NEE+ +  ++   R ++ L P  +  EI+ +NDGSKD T   +     S+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  61   RQIKIVNLSRNFGKEIALSAGIDYAQGNAVIPIDADLQDPPELIHELVDKWREGYDIVYA  120
              +  ++++RNFGKE AL AG+D A G+AVIPID DLQDP E+I +L++KW+ G ++V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  121  TRRSRQGETWVKQFTAKMFYKVIGRMTEIKIPPNTGDFRLMDRKVVNAIKQLPERTRFMK  180
             R  R  + ++K+ TA  FYK+  +++  KI  N GDFRLM R VV+ IK LPER  FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GLFAWVGYRQTFVLFDREPRFQGQTKWNYWKLWNFALDGIFSFSLLPLKVWTylgsiisl  240
            G+++WVG +   V + R  R  G +K N WKLWN+AL+GI SFS +PL+VWTY+G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  241  lslayasflilKTITLGVDVPGYASLMVAILFLGGVQLISLGVIGEYLGRVYEEVKARPL  300
            +S+ Y++ +I+ T+ +G  V GY+SL+V+ILFLGGVQLI++GV+GEY+GR+Y E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  301  YLV  303
            Y++
Sbjct  299  YIL  301

309) gtrB in NC_003919


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (771),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 131/305 (43%), Positives = 223/305 (74%), Gaps = 1/305 (0%)

Query  7    RLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHALTEADAQ  66
            +++++++ FNEE +IP++   +   + +L + + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  67   VSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTR  126
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QDP E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  127  VIREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQALQQLRERHRFMKGL  186
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VV+ ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  187  FGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPlraatylglltalla  246
            ++WVG +   + Y R  R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  247  flfgaWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYL  306
            FL+GAW++I + + G+PV G P+L+  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  307  VDTHR  311
            +   R
Sbjct  301  LKKGR  305

310) ykcC in NC_014479


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  207 bits (768),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 127/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SVVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDHSIEILREHSLLDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILDMIEKWREGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAALFYRLLSSMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGMLMSGAGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

311) Cyast_2467 in NC_019778


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  206 bits (766),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 139/304 (46%), Positives = 216/304 (72%), Gaps = 0/304 (0%)

Query  7    IDLSLLVPCYNEQDNLDYLFHKLTEVLDSLNIVYEIICINDGSKDNTLLKLIEYCMHNSD  66
            + +SL+VP +NE++ +  ++  + E  +      EI+ INDGSKD T   +    + ++ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  67   IKIINLSRNFGKEAAMTAGLDYAKGKAVIPIDADLQDPPELIKQFWFKWLEGYDVVYGVR  126
            +  ++++RNFGKE+A+ AGLD A G AVIPID DLQDP E+I ++  KW  G ++V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  127  IDRKGESWIKKMTSKYFYRFIGKISDTPIPEDTGDYRLMDQKVVQALKQMPERNRFMKGL  186
             DR  ++++K+ T+  FY++  KIS   I E+ GD+RLM + VV+ +K +PERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  187  FSWVGYKQTAIYFSREPRQSGKSRFNYWKLWNFAIDGITSFSSIPLKIWSYFGLIVSFLG  246
            +SWVG +   + + R  R +G S+FN WKLWN+A++GITSFS++PL++W+Y+GL+V+ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  247  LIYGSFLIIRTLISGVEVPGYASTIVTilflggiqlitlgilgEYTGRIYQEVKQRPIYL  306
            ++YG+ +II TL+ G  V GY+S +V+ILFLGG+QLI +G+LGEY GRIY E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  307  VQET  310
            ++  
Sbjct  301  LKKG  304

312) ykcC in NC_000964


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  206 bits (765),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILEMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGTGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +GV+GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

313) ykcC in NC_020507


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  206 bits (765),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILEMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGTGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +GV+GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

314) I653_06600 in NC_020832


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  206 bits (766),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPKVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILDMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSGMTDIDIPVDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +GV+GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

315) ykcC in NC_018520


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  206 bits (765),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILEMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGTGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +GV+GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

316) SGO_1019 in NC_009785


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  206 bits (765),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 132/309 (43%), Positives = 209/309 (68%), Gaps = 4/309 (1%)

Query  1    MTISVIVPCYNEEESLPLFYAEMEKIKPRLRDNIEYIFVNDGSQDRTLEVLHELNMMDPN  60
            M IS++VP +NEEE++P+FY  +  ++     ++E +F+NDGS+D T  +++ L + DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   AHFISFSRNFGKEAALYAGLQHARGELVTVMDVDLQDPPELLVEMKTMLDEQKDLDCVGT  120
               +SF+RNFGKE+AL+AGL+HA G+ V  +DVDLQDP E++ ++    +   ++  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRTSREGEPPIRSFFANLFYKLINKISQVEMVDGARDFRLMRRPMVDAILEVSEYNRFSK  180
            +R+ R  +  ++   A+ FYKL NKIS   + +   DFRLM R +V+ I  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFKTEYLEYKNVERVAGKTSWNFWQLFNYSLEGIVNFSEAPLHI-AFLGGLLSW  239
            GI++WVG +T+ +EY   ERVAG +  N W+L N +LEGI +FS  PL++ +++G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA-  237

Query  240  MLAFILVVFIVVRTLVFGDPTSGWPSLMTVILFIGGFQLLTIGILGKYIGKVFTETKKRP  299
             ++F+    +++ TLVFG+P  G PSL+  ILF+GG QL+ IG+LG YIG+++ ETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  VYIIKEKSK  308
             YI+K   K
Sbjct  298  KYILKKGRK  306

317) RHOM_12095 in NC_015977


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  206 bits (767),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 132/307 (43%), Positives = 206/307 (68%), Gaps = 1/307 (0%)

Query  1    MKISLIVPCYNEEEALPIFYRETKNVLETMPCEHEFVFINDGSRDRTLAVLKELAGQDGC  60
            MKISL+VP +NEEEA+P+FY+  ++  E  P E E+VFINDGS+D T ++++ LA  D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VQYLSFSRNFGKEAAMYAGFCNVTGDYVAVMDADMQDPPALLPEMLDKLLTGEYDSVATC  120
            V  LSF+RNFGKE+A++AG+ + +GD V  +D D+QDP  ++P++++K  +G  + V + 
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  121  RVTRKGEPPIRSWFARLFYRMINRVSDADIVDGARDFRLMRREMVDAIVEMGEYNRFSKG  180
            R  R  +  ++   A  FY++ N++S + I +   DFRLM RE+V+ I  + E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  181  IFGWIGFRTCWLPYENVNRVAGETKWNFWKLFKYAIDGIINFSQAPLAFASWFGMFMTVL  240
            I++W+G +T  + Y   +RVAG +K N WKL + A++GI +FS  PL   + +G+F++ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  241  SFVAVIFIIIRKLVFGDPVTGWASTACIITFIGGVQLFCMGIMGQYIAKTYLEVKKRPHY  300
            SF+    +II  LVFG+PV G +S    I F+GGVQL+ +G++G+YI++ YLE K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  301  IVAESNM  307
            I+  +  
Sbjct  300  ILKKGRK  306

318) ykcC in NC_017196


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILDMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +GV+GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

319) APA386B_686 in NC_021991


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

320) APA42C_17550 in NC_017150


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

321) APA01_17550 in NC_013209


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

322) APA03_17550 in NC_017100


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

323) APA07_17550 in NC_017121


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

324) APA12_17550 in NC_017108


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

325) APA22_17550 in NC_017125


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

326) APA26_17550 in NC_017146


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

327) APA32_17550 in NC_017111


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 143/302 (48%), Positives = 213/302 (71%), Gaps = 4/302 (1%)

Query  10   SVVVPCYNEQEVLPIFHQRLSAVMEGIGAPWEVVYVNDGSRDQTLAGMYALAEQDGRVSV  69
            S+VVP +NE+E +P+F + +    E      E+V++NDGS+D T + + ALA  D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   VNLSRNFGKEIALTAGLDHARGTRGIIVIDADLQDPPEVIADLVAAWTDDVDTVYARRNT  129
            ++++RNFGKE AL AGLDHA G  ++I ID DLQDP EVI++L+  W  + + V A+R+ 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGD-AVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  130  REGES-IPKRLTAWMFYRVMKRLGNKVVIPPDTGDFrlmsrrlvdsllllrerHRFMKGL  188
            R  ++ + ++ + W FY++ ++++    I  + GDFRLMSR +V+++ LL ER+ FMKG+
Sbjct  123  RSTDGRLKRKTAEW-FYKLHNKISTPK-IEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  FAWVGFPSRAVLYDRAPRSAGKSSFNYWSLWNFALEGITSFSVLPLQLSTYMGLGISILA  248
            ++WVG  +  V Y RA R AG S FN W LWN+ALEGITSFS +PL++ TY+GL ++ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  VCYGIWIVGCTLLFGNRVAGYPSLMAVILFLGGIQLMTVGLIGEYVGRIFNETKKRPLYL  308
              YG W++  TL+FGN V GYPSL+  ILFLGG+QL+ +G++GEY+GRI+ ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  309  VE  310
            + 
Sbjct  301  LK  302

328) MAE_03130 in NC_010296


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 144/303 (48%), Positives = 220/303 (73%), Gaps = 0/303 (0%)

Query  8    VKISVVVPLYNEEENIDALFGRLLAVLETINTSYEVVCVNDGSRDNTLKNLVEYHQRYPQ  67
            +KIS+VVP++NEEE I  ++  +    E      E+V +NDGS+D T   +       P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  68   IKVVNLSRNFGKDIAMSAGIDYSQGMAVIPIDADLQDPPELIAEMIEKWQQGYDVVYASR  127
            +  ++++RNFGK+ A+ AG+D + G AVIPID DLQDP E+I+++IEKWQ G ++V A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  128  RVRIGESWLKRFTAEGFYQVINKLSRVPIPPNTGDFRLIDRRVVESIKKMPERQRFMKGI  187
              R  +++LKR TAE FY++ NK+S   I  N GDFRL+ R VVE+IK +PER+ FMKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  188  FAWVGYKQTSILFDREPRYQGQTKWNYWKLWNFAIDGITSFSFLPLKVWTYVGFIISLVS  247
            ++WVG +   + + R  R  G +K N WKLWN+A++GITSFS +PL+VWTY+G++++ +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  248  LVYASFLMLRTIILGIDVPGYASLMVAilflggiqlltlgiigEYIGRVYEEVKGRPLYL  307
            ++Y++ +++ T+++G  V GY+SL+V+ILFLGG+QL+ +G++GEYIGR+Y E K+RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  308  VRD  310
            ++ 
Sbjct  301  LKK  303

329) Aave_0599 in NC_008752


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 137/302 (46%), Positives = 214/302 (71%), Gaps = 3/302 (0%)

Query  31   LRLSCVVPAHNEESNLEEFVHALARAAGALTP-DFEIVIVNDGSRDGTHAVAMKLARELP  89
            +++S VVP  NEE  +  F  ++ R    L P + EIV++NDGS+D+T+++   LA   P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  90   LRY-LALSRNFGKEAGLSAGIDHARGNAVLLIDADFQHPLDLLPQMHALWLSGYDMVYGV  148
            L   L+++RNFGKE++L AG+DHA G+AV+ ID D+Q+P++++P++   W +G +MV + 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  149  IADRAGDSGAKRMGTRAFYRLLNAGNKVKIPPNAGDFRWMDRRVVDALKALPERNRFMKG  208
             +DR+ D+  KR  +  FY+L N  +  KI  N GDFR M R VV+ +K LPERN FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  209  LYAWVGFKSAALPFVPLNRAGGVSSFNlrglgslalsglTAFTTLPLRVWSMAGGCISLA  268
            + +WVG ++  + +V  +R +G+S FN + L +LAL G+T+F+T+PLRVW+  G  ++  
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  269  ALVYGAWITVSALVFGNPLDGWPTLAASIMLFSGVQLMSIGILGEYVGRIYDEVKRRPLY  328
            +++YGAW+ + +LVFGNP+ G P+L  SI++++GVQL++IG+LGEY+GRIY E K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  329  LV  330
            ++
Sbjct  300  IL  301

330) Spaf_0820 in NC_017905


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (763),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 140/306 (46%), Positives = 207/306 (68%), Gaps = 4/306 (1%)

Query  1    MTISVVVPCFNEEESIPLFYremervrmemGEKFEYIFINDGSSDGTLSVLRKLHVTDSN  60
            M IS+VVP FNEEE+IP+FY+ +   +       E +FINDGS D+T S++  L V+D+ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VHYLSFSRNFGKEAALYAGLESASGEYVTVMDVDLQDPPELLIEMKQKLEEQPDLDCVGT  120
            V  LSF+RNFGKE+AL+AGL+ ASG+ V  +DVDLQDP E++ ++ +K +  +++  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRVTRDGEPPIRSFFARMFYKLINHISQVEMVDGARDFRLMRRPMVDAIMELSEYNRFSK  180
            +R  R  +  ++   A  FYKL N IS   + +   DFRLM R +V+ I  L+E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFETEYLEYKNVERVAGETSWNFWSLFKYSIEGIVNFSDAPLNI-AFIGGLLSW  239
            GI++WVG +T+ +EY   ERVAG +  N W L + ++EGI +FS  PL + ++IG +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA-  237

Query  240  ILAFIMVILIVIRTLVFGDPTSGWPSLMTVILFLGGFQLLTIGILGKYIGKIFMETKKRP  299
             ++F+    ++I TLVFG+P  G PSL+  ILFLGG QL+ IG+LG YIG+I++ETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  IYLIKE  305
             Y++K 
Sbjct  298  KYILKK  303

331) AXYL_04675 in NC_014640


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 137/306 (45%), Positives = 211/306 (69%), Gaps = 6/306 (1%)

Query  18   IQLSVIIPFLNEREVLPACHERLRRVLKALGLPYE--IVFVDDGSSDGSAEYLQALLREE  75
            +++S+++P +NE E +P     +R  ++ L  PYE  IVF++DGS D++   ++AL   +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSD  58

Query  76   RGIKLVRLSRNFGKEAAMTAGIEHAAGAAVIVLDADLQDPPEVIPEMVRAWQEGADVVSM  135
              +  + ++RNFGKE+A+ AG++HA+G AVI +D DLQDP EVIP+++  WQ GA++V  
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  136  RRRSRAGESAFKRFSAYAYYRLLSRLSKAAIPPDTGDFRLMSRRAVTALMQLPERCRYMK  195
            +R  R+ ++ +KR +A  +Y+L +++S + I  + GDFRLMSR  V  +  LPER  +MK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  196  GLYAWVGMPTRIIDYDREPRAAGTTKWSYLALFRLAMEGITSFSTAPLR-WATglgavaa  254
            G+ +WVG  T +++Y R  R AG +K +   L  LA+EGITSFST PLR W T +G   A
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVW-TYIGLFVA  237

Query  255  lggavfgagiifKTLIFGDDVAGYPSLMAMMTFMGGVQLITIGLLGEYVGKTYLESKQRP  314
              + ++GA +I+ TL+FG+ V GYPSL+  + F+GGVQLI IG+LGEY+G+ YLE+K RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  315  VYLVRD  320
             Y+++ 
Sbjct  298  KYILKK  303

332) Cylst_5009 in NC_019757


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 133/305 (44%), Positives = 204/305 (67%), Gaps = 11/305 (3%)

Query  7    SLVIPIYNEEENITEMYRRLINVIEQVDGEVELILIDDGSRDRSLSMIRELHHRDSRVRY  66
            SLV+P++NEEE I   Y+ + +  E    EVE+++I+DGS+D + S+I  L   D+ V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  67   LSFARNFGHQIAVTAGLNFVQGQSIIVMDADLQDPPELILTMIEKWQQGYQVVYAQRLSR  126
            LSF+RNFG + A+ AGL+   G+++I +D DLQDP E+I  +IEKWQ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  127  KKETWLKRFTAYAFYRILRRLAKVDIPADTGDFCLMDRQVVDVLNAMPERNRYIRGLRAW  186
              + +LKR TA  FY++  +++   I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  187  VGFRQTAIPFERDPRFAGKVKYTFGKSWALAVDGIISFSTVPLRLATYIGMLSSGIAMLM  246
            VG +   + + R  R AG  K+   K W LA++GI SFST PLR+ TYIG++ ++I+   
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF--  241

Query  247  ILLVLY--WRLVDPI---SPLIGYTLITIAMFFLGSIQLICIGILGEYIGRIYEEVKGRP  301
                LY  W ++D +   +P+ GY  + ++++FLG++QLI IG+LGEYIGRIY E K+RP
Sbjct  242  ----LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  IYTLK  306
             Y LK
Sbjct  298  KYILK  302

333) PBPRB0750 in NC_006371


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (763),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 130/299 (44%), Positives = 211/299 (71%), Gaps = 0/299 (0%)

Query  24   LSIIIPMYNEELVIEECHKRVCAVLDGLNEHCEIIYVDDGSSDSSVKLANGFSSEYHQIV  83
            +S+++P++NEE  I    K V    +    + EI++++DGS D++  + N+++     +V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  84   TICLSRNFGKEAAMSAGLQAAKGQAVILIDADLQDPPELIPAMVNEWKQGFDVVDMQRHK  143
             + ++RNFGKE+A+ AGL+ A G+AVI ID DLQDP E+IP +++ W+ G ++V  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  144  RHGESWFKRVTAAAFYKLINSMSDIPIPQNVGDFRLIDRRVVDEINKLPERTRFMKGLFA  203
            R  ++++KR TA  FYKL N +S   I +NVGDFRL+ R VV++I+ LPER  FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  204  WPGFRRTTLQFDRDARQAGETKWNYTKLVHLAFEGITSFSTRPLRLATAAGLFTSLAAII  263
            W G +   +++ R  R AG +K N  KL +LA+EGITSFST PLR+ T  GLF +  +++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  264  MAAVVFTKTIIWGDPVAGYPSTIMIVLLLGGVQLLSIGLMGEYVGRLFIEAKQRPLFVV  322
             +A ++  T++ G+PV GYPS ++ +L+LGGVQL++IG++GEY+GR+++E+K RP +++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

334) MY9_1412 in NC_017743


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 127/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREYSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIAVIDADLQDPPELILDMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSSMTDIDIPIDTGDFRLMDRKVCDEMKKLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYVGVLMSGAGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y+G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

335) BSn5_18465 in NC_014976


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILDMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +GV+GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

336) A7A1_1432 in NC_019896


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILDMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +GV+GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

337) I33_1451 in NC_017195


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILDMIEKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +GV+GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

338) MELS_1394 in NC_015873


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 129/307 (43%), Positives = 212/307 (70%), Gaps = 1/307 (0%)

Query  2    KQIDILVPCYNEEAVLPQFYERTCAVIDSLPDYAFTFIFVNDGSRDRTLPILRQLHEKDA  61
             +I ++VP +NEE  +P FY +T   ++ L  Y   ++F+NDGS+D T +I+  L   D+
Sbjct  1    MKISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  62   RVAYVSLSRNFGKEAAMLAGMDYAEGDALVIMDADLQDPPELLPDMIAWWEKGYRDVSAR  121
             V  +S++RNFGKE+A++AG+D A GDA++ +D DLQDP E++P++I  W+ G   V A+
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  122  RRHREGETFFKKWSSHVYYRLLKKLSPVPVQEDVGDFRLLDKRCVKALCSLRECQRYTKG  181
            R +R  +  +K+ +++ +Y+L +K+S   ++E+VGDFRL+ +  V  +  L E + + KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  LFCWIGFEKKEILFDRPPRAAGKTKWNYWKLFNLAIDGITSFTTAPLRIaafagcffafv  241
            ++ W+G +   + + R+ R AG +K N WKL NLA++GITSF+T PLR+ ++ G F A +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  242  aaIYLIFIVLRTLLYGEDVPGYPSLISLILFIGGVQFTFMGILGEYVGRIYNESKGRPPY  301
            + +Y   +++ TL++G+ V GYPSL+  ILF+GGVQ+  +G+LGEY+GRIY E+K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  302  IVGESTK  308
            I+  + K
Sbjct  300  ILKKGRK  306

339) Cst_c14220 in NC_020134


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 205/304 (68%), Gaps = 1/304 (0%)

Query  6    SVVVPMYNEEAVARETYRRLTEVMEKIGCAYEIIFVNDGSRDRTAEILNEICDMDKRVKL  65
            S+VVP++NEE      Y+ + E  E      EI+F+NDGS+D T  I+N +   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  66   VNFSRNFGHQIAITAGTDYASGQCVVIIDGDLQDPPELIPEMIEKWKSGYDVVYGKRISR  125
            ++F+RNFG + A+ AG D ASG+ V+ ID DLQDP E+IP++IEKW++G ++V +KR  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  126  KGETLFKKFTAAAYYRFLRSMTDVSIPVDTGDFRLIDRKVCDALKQVRERNRYVRGLISW  185
              +  +K+ TA  +Y++   ++   I  + GDFRL+ R V + +K + ERN +++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  186  LGFRQTAIEFEREERFAGETKYPLKKMVKLALDGITTFSYKPLKLASYIGSIISAVSFIY  245
            +G +   +E+ R ER AG +K+   K+ +LAL+GIT+FS  PL++ +YIG +++++SF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  246  LIYVVVKRIFFPETVQPGWASILAVSLFFNGITLLMLGIIGEYIGRIYDEVKARPLYVVK  305
               +++  + F + V+ G +S+L   LF+ G+ L+ +G++GEYIGRIY E K+RP Y++K
Sbjct  244  GAWMIIDTLVFGNPVR-GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  306  NTRN  309
            + R+
Sbjct  303  KGRK  306

340) Clst_1372 in NC_020887


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 205/304 (68%), Gaps = 1/304 (0%)

Query  6    SVVVPMYNEEAVARETYRRLTEVMEKIGCAYEIIFVNDGSRDRTAEILNEICDMDKRVKL  65
            S+VVP++NEE      Y+ + E  E      EI+F+NDGS+D T  I+N +   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  66   VNFSRNFGHQIAITAGTDYASGQCVVIIDGDLQDPPELIPEMIEKWKSGYDVVYGKRISR  125
            ++F+RNFG + A+ AG D ASG+ V+ ID DLQDP E+IP++IEKW++G ++V +KR  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  126  KGETLFKKFTAAAYYRFLRSMTDVSIPVDTGDFRLIDRKVCDALKQVRERNRYVRGLISW  185
              +  +K+ TA  +Y++   ++   I  + GDFRL+ R V + +K + ERN +++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  186  LGFRQTAIEFEREERFAGETKYPLKKMVKLALDGITTFSYKPLKLASYIGSIISAVSFIY  245
            +G +   +E+ R ER AG +K+   K+ +LAL+GIT+FS  PL++ +YIG +++++SF+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  246  LIYVVVKRIFFPETVQPGWASILAVSLFFNGITLLMLGIIGEYIGRIYDEVKARPLYVVK  305
               +++  + F + V+ G +S+L   LF+ G+ L+ +G++GEYIGRIY E K+RP Y++K
Sbjct  244  GAWMIIDTLVFGNPVR-GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  306  NTRN  309
            + R+
Sbjct  303  KGRK  306

341) GYO_1607 in NC_016047


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  204 bits (760),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 126/301 (42%), Positives = 210/301 (70%), Gaps = 0/301 (0%)

Query  8    SVVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYALGNAIVVIDADLQDPPELILDMIDKWKEGYEVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++I+KW+ G E+V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLSSMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L + ++   I  + GDFRLM R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGMLMSGAGFLY  247
            VG +   VEYVR ER+AG +K+   K+ +L+++GIT+FS  PL++ +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

342) Alide_1984 in NC_014910


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  204 bits (760),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 132/305 (44%), Positives = 209/305 (69%), Gaps = 9/305 (2%)

Query  14   ISIIVPCYNEEEVISETLKRLKIFCSELTELDVELIFVDDGSRDRTRELLRNYASEDTRI  73
            IS++VP +NEEE I+   K ++ F  EL   +VE++F++DGS+D T  ++   A  D  +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  74   KVICFARNFGHQIAVTAGIDAAVGNAVVLIDADLQDPPEVVHEMIAKWKEGYDVVYGTRT  133
              + F+RNFG + A+ AG+D A G+AV+ ID DLQDP EV+ ++I KW+ G ++V + R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  134  ERPGESAFKLATARGFYRLLNKLSDVPIPLDTGDFRLMSRAVVDTLRAMPERDRFVRGMV  193
            +R+ ++ +K  TA  FY+L NK+S   I  + GDFRLMSR VV+ ++ +PER+ F++G++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  194  SWVGFKQVALPYKRAERFAGESKYPLRKMLRFATDGILSFSTKPLQLSVALGMASAALSL  253
            SWVG +   + Y RAER AG SK+  +K+  +A +GI SFST PL++   +G+  A++S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  254  IGIAYALFLRI----FTNTWVEGWTALMIAVLFIGGVQLVSIGILGEYVGRIYSEIKKRP  309
            +   Y+  + I    F N  V G  +L++++LF+GGVQL++IG+LGEY+GRIY E K RP
Sbjct  242  L---YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  310  LYVVQ  314
             Y+++
Sbjct  298  KYILK  302

343) Alide2_2237 in NC_015422


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  204 bits (760),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 132/305 (44%), Positives = 209/305 (69%), Gaps = 9/305 (2%)

Query  14   ISIIVPCYNEEEVISETLKRLKIFCSELTELDVELIFVDDGSRDRTRELLRNYASEDTRI  73
            IS++VP +NEEE I+   K ++ F  EL   +VE++F++DGS+D T  ++   A  D  +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  74   KVICFARNFGHQIAVTAGIDAAVGNAVVLIDADLQDPPEVVHEMIAKWKEGYDVVYGTRT  133
              + F+RNFG + A+ AG+D A G+AV+ ID DLQDP EV+ ++I KW+ G ++V + R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  134  ERPGESAFKLATARGFYRLLNKLSDVPIPLDTGDFRLMSRAVVDTLRAMPERDRFVRGMV  193
            +R+ ++ +K  TA  FY+L NK+S   I  + GDFRLMSR VV+ ++ +PER+ F++G++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  194  SWVGFKQVALPYKRAERFAGESKYPLRKMLRFATDGILSFSTKPLQLSVALGMASAALSL  253
            SWVG +   + Y RAER AG SK+  +K+  +A +GI SFST PL++   +G+  A++S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  254  IGIAYALFLRI----FTNTWVEGWTALMIAVLFIGGVQLVSIGILGEYVGRIYSEIKKRP  309
            +   Y+  + I    F N  V G  +L++++LF+GGVQL++IG+LGEY+GRIY E K RP
Sbjct  242  L---YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  310  LYVVQ  314
             Y+++
Sbjct  298  KYILK  302

344) BT_3379 in NC_004663


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  204 bits (757),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 126/302 (42%), Positives = 211/302 (70%), Gaps = 1/302 (0%)

Query  3    KVSVLIPAYNEELSLPELYSKLKEMMDSYAEYEWEILFVNDGSHDKTLEVIKFLRSQDER  62
            K+S+++P +NEE ++P +Y  ++E  +    YE EI+F+NDGS D T  +I+ L   D  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQE-LKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  63   INFVDLSRNFGKEVAMLAGFDYATGDCLVIMDADLQHPPHLIPEMLKYWEEGYDDVYAKR  122
            +  + ++RNFGKE A++AG+D A+GD ++ +D DLQ+P ++IP+++  W+ G + V AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  123  ITRGKESLMRKYLSLLFYKLLQKTTRVEILPNVGDFRLLDRCCVNALKQMRESQRYTKGM  182
              R+ ++ +++  +  FYKL +K +   I  NVGDFRL+ R  V+ +K + E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  183  YCWIGFRKKEIKFEQEDRVAGTssfnffsllslAVEGVTSFTVAPLRISTFAGIIVSLVA  242
              W+G +   + + + +RVAG S FN   L +LA+EG+TSF+  PLR+ T+ G++V+ ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  243  FIYMCFIMFKTLIWGEVVQGFPTLMVVILFLGGIQLLSLGVIGEYIGRIFNETKNRPTYI  302
            F+Y   +++ TL+ G+ V+G+P+L+V ILFLGG+QL+++GV+GEYIGRI+ ETK+RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  303  AR  304
             +
Sbjct  301  LK  302

345) NH44784_014161 in NC_021285


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  204 bits (758),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 116/269 (44%), Positives = 194/269 (73%), Gaps = 1/269 (0%)

Query  61   EIIVADDGSTDGTEALMAEWTQYDGFRY-VQLSRNFGKEAALSAGLESATGDAIICLDAD  119
            EI+  +DGS D+TE+++   +  D +   + ++RNFGKE+AL AGL+ A+GDA+I +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  120  MQHPPALIEQMLARWAAGAEMVYAVRETRADESWLKRTGARWFYKLLSGARGVEVPAHAG  179
            +Q+P  +I +++ +W AGAEMV A R  R+ +++LKR  A WFYKL +      +  + G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  180  DFRLMSRNVVDALNALPERTRFMKGLYAWVGFKGEALPYTPDERMHGDSRFGGMRLARLA  239
            DFRLMSR+VV+ ++ LPER  FMKG+ +WVG + + + Y   ER+ G S+F G +L  LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  240  LDGLTAFTTWPLRLVSLVGVLFAVLAMAYASYLVIDYLVSGNAVSGWTTIVTAVLFFAGV  299
            L+G+T+F+T PLR+ + +G++ A ++  Y++ ++ID LV GN+V G  +++ ++LF++GV
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  300  NLISLGVVGEYVSRIFDEVKGRPLFVVRR  328
            +LI++GV+GEY++RI+ E K+RP +++++
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILKK  303

346) NH44784_019181 in NC_021285


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (755),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 135/303 (45%), Positives = 212/303 (70%), Gaps = 2/303 (0%)

Query  18   VQVSIIIPFLNEREVLPLCHARLRQVLDALGEPWEIVFVDDGSQDGSAEYLAGLMAREPG  77
            +++S+++P +NE E +P+    +R+  +      EIVF++DGS+D++   + +L   +P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  78   LKLVRLSRNFGKEAAMTAGLEHATGAAVILLDADLQDPPELIPDMVRAWREGADVVCMRR  137
            +  + ++RNFGKE+A+ AGL+HA+G AVI +D DLQDP E+IP+++  W+ GA++V  +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  138  RSRAGESWLKRASAYAYYRLLSRLSRAAIPPDTGDFRLMSRRAVDALLRLPERCRYMKGL  197
              R+ +++LKR +A  +Y+L +++S + I  + GDFRLMSR  V+ +  LPER  +MKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  198  YAWIGMPTRVIDYDRAPRAAGATKWNYFALLRLAMEGITSFSTAPLR-Wataagvtaall  256
             +W+G  T V++Y RA R AG +K N   L  LA+EGITSFST PLR W T  G+  A +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVW-TYIGLFVASI  239

Query  257  galfglviifKTLIFGDDVEGYPSLMAMITFLSGIQLITIGLLGEYMGKTYMEAKQRPVY  316
            + L+G  +I+ TL+FG+ V GYPSL+  I FL+G+QLI IG+LGEY+G+ Y+E+K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  317  LVS  319
            ++ 
Sbjct  300  ILK  302

347) AZOBR_40343 in NC_016617


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (755),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 221/306 (73%), Gaps = 4/306 (1%)

Query  47   RLSVVIPFYNEGPNIAALFERLVPVLDRLDA-EWEVVCVNDGSRDDTLDRLLDVHDADPR  105
            ++S+V+P +NE   I+ ++ + V  ++ L + E E+V +NDGS+D T   +  +  +DP 
Sbjct  2    KISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  106  VKVVDLSRNFGKELALSAGLRHTTGDAVVPMDADLQHPPELLPQFLAKWREGYDVVVAVR  165
            V  + ++RNFGKE AL AGL H++GDAV+P+D DLQ+P E++P+++ KW+ G ++V+A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  166  HARVGQS-LKHRAFARAFYWIFDNLSEVKLPREVGDFRLMDRRVVDVINRMPERTRFMKG  224
              R  ++ LK+++  + FY + +++S  K+  +VGDFRLM R VV+ I+ +PER  FMKG
Sbjct  121  SDRSTDGRLKRKTAEW-FYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  225  IFAWVGFRQASIPYQQGERAGGDTKWGFLKLLSLSFDGLTAFSTFPLRVWSLVGMAISGF  284
            I++WVG +   + Y ++ER +G +K    KL +L+++G+T+FSTFPLRVW+ +G+ ++++
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  285  AFVyillrllrtliyGIDVPGYESLLAAVLFMGGIQLVTLGVIGDYLGRVFNEVKGRPLY  344
            +F+Y    ++ TL++G  V GY SLL ++LF+GG+QL+ +GV+G+Y+GR++ E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  345  IVRSAH  350
            I++ ++
Sbjct  300  ILKKGR  305

348) ykcC in NC_014551


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (753),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 125/301 (42%), Positives = 207/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKDHYELIFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAVIVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+AVI ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFVVLYMKLFTDSTITGWSSLIVIQLLFSGIVLLILGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

349) ykcC in NC_017190


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (753),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 125/301 (42%), Positives = 207/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKDHYELIFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAVIVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+AVI ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFVVLYMKLFTDSTITGWSSLIVIQLLFSGIVLLILGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

350) ykcC in NC_017188


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (753),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 125/301 (42%), Positives = 207/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKDHYELIFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAVIVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+AVI ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFVVLYMKLFTDSTITGWSSLIVIQLLFSGIVLLILGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

351) ykcC in NC_017191


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (753),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 125/301 (42%), Positives = 207/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKDHYELIFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAVIVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+AVI ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFVVLYMKLFTDSTITGWSSLIVIQLLFSGIVLLILGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

352) Msil_0373 in NC_011666


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (754),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 124/302 (42%), Positives = 204/302 (68%), Gaps = 0/302 (0%)

Query  12   ELSVVAPVYNESQNLRPLLDRLIPVLESCARSFEIIFVDDGSTDDTIEVLRKAHDLDPRI  71
             +S+V PV+NE + +  +   +    E  +   EI+F++DGS D T  ++      DP +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  72   RAVSLSRNFGKEIAIAAGLDHISGGAAVIIDADLQHPPEIIRAFVEKWREGYKNVYGQRI  131
             ++S++RNFGKE A+ AGLDH SG+A + ID DLQ+P E+I  ++EKW+ G   V ++R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  132  DRAADAPLRRVLTQRFYRLFGAVGEMQLPEGAGDFRLLDAKAVAALKTMREHARFSKGLY  191
            DR++D+ L+R  +++FY+L   ++  ++ E  GDFRL+    V  +K + E+  F KG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  192  AWIGFKSIGVPFEVAPRLAGHSKFSYRKLTHFALDGLMSFTTMPLKIWTYFGLATSVlal  251
            +W+G ++  V +  A R+AG SKF+ +KL ++AL+G+ SF+T PL++WTY+GL  + +++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  252  alaaFYVIRTLLFGVDVPGYASLIVSITFFAGIQLLSLGILGEYIGRIFAEVKRRPLYLV  311
              +A  +I TL+FG  V GY+SL+VSI F++G+QL+++G+LGEYIGRI+ E K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  EE  313
              
Sbjct  302  KK  303

353) SSP0107 in NC_007350


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (753),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 126/309 (41%), Positives = 201/309 (66%), Gaps = 6/309 (1%)

Query  1    MIRILIPCFNEASVLEQTYAKLTEIMQRDSISNNYKYELLFIDDGSKDRTLAIIKALAQR  60
             I +++P FNE   +   Y  + E+ +     + Y  E++FI+DGSKD T +II+ALA  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQE----LKPYEVEIVFINDGSKDATESIINALAVS  57

Query  61   DHAVKFISFSRNFGKESAMYAGLCASTEAEALVILDGDLQHPPTLIPQMIAHYRDGEDQV  120
            D  V  +SF+RNFGKE+A++AGL   + ++A++ +D DLQ+P  +IP++I   + G + V
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGL-DHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMV  116

Query  121  VAKR-DRTGEHVIRKTVSQLYYAVINKIVDVDLEDGVGDFRLLSQRAIREVVNLGEYNRF  179
            +AKR DR+ +  +++  ++ +Y + NKI    +E+ VGDFRL+S+  + ++  L E N F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  180  SKGLFAWIGFEPKVIEYENVVRADGESKWTFSSLLNYGIDGLISFNNKPLRAILYFGLFV  239
             KG+++W+G +  V+EY    R  G SK     L N +++G+ SF+  PLR   Y+GLFV
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  240  CAMSFLYILFNFIYTVSYGVSTPGYFTTIVAVLFLGGVQLTSLGVIGEYIGRIYYEVKQR  299
             ++SFLY    +I T+ +G +  GY + +V++LFLGGVQL ++GV+GEYIGRIY E K R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PLYIIRQTN  308
            P YI+++  
Sbjct  297  PKYILKKGR  305

354) lwe2500 in NC_008555


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (756),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 129/301 (43%), Positives = 207/301 (69%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESIIKLYETVVNVMDSIKDKYTFELLFINDGSKDNTLEIVKQLHKEDKR  63
            I++ VP +NE+E+I  +Y TV +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELITQMVELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I +++E W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRPGESWVKKITSKYYYKTLQKVTKTPVLPDTGDFRLLDRRCVDAIKKLKETQRYTKGL  183
            + R+ ++++K+ T+  +YK  +K++   +  + GDFRL+ R  V+ IK L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRALINLALEGITSYTTLPLRLSTVAGFTISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FVYLIYILIKTLIMGSNSSGFPTLMITILFLGGIQLTSIGIIGEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+   G+P+L+++ILFLGG+QL +IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

355) Bpet4604 in NC_010170


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (756),  Expect = 7e-54, Method: Compositional matrix adjust.
 Identities = 136/301 (46%), Positives = 214/301 (72%), Gaps = 2/301 (0%)

Query  23   LSIIIPFFNEQEVlplclnrlqpllqSQGYPYEIIFVDDGSTDDSVAFLRAVARQNSAVR  82
            +S+++P FNE+E +P+  + ++ + + + Y  EI+F++DGS D + +++ A+A  ++ V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  83   IVCLSRNFGKEAAMSAGLVHARGAAVIVLDADLQDPPELIPAMVAAWRAGADVVCMRRRS  142
             + ++RNFGKE+A+ AGL HA G AVI +D DLQDP E+IP ++  W+AGA++V  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  143  RQGEGWAKKLSAYAFYRLLSRLSHSKIPADTGDFRLMSRRTVNAMLRLPERCRYMKGLYA  202
            R  +G+ K+ +A  FY+L +++S +KI  + GDFRLMSR  V+ +  LPER  +MKG+ +
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  203  WVGMPTTVIDYDRAPRAAGTTKWNYFALFGLAMEGITSFSTTPLR-WATaigaviallgg  261
            WVG  T V++Y RA R AG +K N   L  LA+EGITSFST PLR W T IG  +A ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVW-TYIGLFVASISF  241

Query  262  gfglaivlKTLIFGDSVPGYPSLMAMITLLSGIQLLTIGLLGEYLGKTYMESKQRPVYLV  321
             +G  +++ TL+FG++V GYPSL+  I +L+G+QL+ IG+LGEY+G+ Y+E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  322  R  322
            +
Sbjct  302  K  302

356) Mic7113_2899 in NC_019738


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  203 bits (756),  Expect = 7e-54, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 205/305 (68%), Gaps = 7/305 (2%)

Query  4    KYSLVIPVYNEEKIITELYRRLSAVIDQLGEPVEVILINDGSRDRTLSLLRELHEKDPRI  63
            K SLV+PV+NEE  I  +Y+ +    +     VE+++INDGS+D T S++  L   DP +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   CYISLARNFGHQIAVTAGLNFVRGDAIVVMDADLQDPPELIPVLVEKWQQGYQVVYAQRT  123
              +S++RNFG + A+ AGL+   GDA++ +D DLQDP E+IP L+EKWQ G ++V A+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  QRKKESWLKRLPAYVFYRILRRLADIEIPLDTGDFCLMDRKVVDVLNSMPERNRFIRGLR  183
            +R  +++LKR  A  FY++  +++   I  + GDF LM R VV+ ++ +PERN F++G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  SWVGLQQTCICFERDPRFAGEVQYTFRKSLSLAAIGLISFSRVPLRISTYLGLLAATVAV  243
            SWVG Q   + + R  R AG  ++  +K  +LA  G+ SFS  PLR+ TY+GL+ A+++ 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  LMAILVFYWRIIAP---SSPLTGLATIMIAMFFLGAVQLVSIGILGEYVGRIYEEVKGRP  300
            L +     W II     ++P+ G ++++++++FLG+VQL++IG+LGEY+GRIY E K+RP
Sbjct  242  LYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  LYVLS  305
             Y+L 
Sbjct  298  KYILK  302

357) ykcC in NC_022075


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (752),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 205/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEEPVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREQSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYMKLFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L   + + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

358) ykcC in NC_022081


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (752),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 205/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEEPVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREQSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYMKLFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L   + + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

359) midi_01004 in NC_015722


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 135/302 (45%), Positives = 219/302 (73%), Gaps = 0/302 (0%)

Query  4    KISIIVPVHNEEEAIEPFIDNILTVLNKLTDNFEIIFINDGSSDQTLKKIITQRERLPQI  63
            KIS++VPV NEEEAI  F   +    +    + EI+FINDGS D T   I +     P +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   KAIDLSRNFGKEAAITAGLDYASGEAVVPIDVDLQDPPTLLEGMVQKWQEGFDIVFAKRV  123
             ++ ++RNFGKE+A+ AGLD ASG+AV+PIDVDLQDP  ++  +++KWQ G ++V+AKR 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  KRNKDSFFKKKTATAFYWLWNKVADTQIPVNVGDYRlldkkvvlvlRQIREKNRFMKGIF  183
             R+ D+ +K+KTA  FY L NK++  +I  NVGD+RL+ + VV  ++ + E+N FMKGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  AWVGFKSSVIEFERPERFSSTTSFNFIKLYKLALDGILAFTSAPLKIWMYigfiisissf  243
            +WVG ++ V+E+ R+ER ++ + FN  KL +LAL+GI +F++ PL++W YIG++++  SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  ftiiYLITRTVIHGVDVPGYASIMITVLFMGGINLFSLGIMGQYLARIYDEVKNRPIYLI  303
            +    +I  T++ G  V GY+S+++++LF+GG++L+++G++G+Y++RIY E K+RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  304  NK  305
            +K
Sbjct  302  KK  303

360) Syncc9605_0162 in NC_007516


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (749),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 138/307 (45%), Positives = 215/307 (71%), Gaps = 9/307 (2%)

Query  8    VVAACFNEAEVISAFIERVLALPEVD----HLLLIDDGSSDATVAVIRAWQQSHANPAVT  63
            +V + FNE E I+ F   V  + E+     ++++I+DGS DAT ++I A   + ++P V 
Sbjct  5    LVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINA--LAVSDPLVV  62

Query  64   LLELTRNFGKEAAMLAGLDYANGRCAAAVLIDSDLQHPPERIPAMVQAWRNGAEVVTAVR  123
             L +TRNFGKE+A++AGLD A+G   A + ID DLQ+P E IP +++ W+ GAE+V A R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASG--DAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  DDRDAEGLVKVATASWFYRVFNRLVDSIQLQEGAGDFRLLSAPVVEAVTQLREATRFSKG  183
             DR ++G +K  TA WFY++ N+ + + +++E  GDFRL+S  VVE +  L E   F KG
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  184  LMPWTGYRSEEIAYSRVARVGGTTSWSSLKLWRYALDGIFSFTVKPLKVWGVIGVLISFL  243
            +++W G +++ + Y R  RV+G +  ++ KLW  AL+GI SF+  PL+VW  IG++++ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  244  SFVYAALIVLRTLVFGIDLPGYASLIVAVLFlggiqligigvlgEYIGRIYIDVKQRPHY  303
            SF+Y+A +++ TLVFG  + GY+SL+V++LFLGG+QLIGIGVLGEYIGRIY++ K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  304  FVRAVHQ  310
            +++  ++
Sbjct  300  ILKKGRK  306

361) B938_06610 in NC_019842


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (750),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 125/302 (42%), Positives = 208/302 (69%), Gaps = 2/302 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREQSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  -MFIVLYMKVFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQ  306
               +++   VF N+ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++
Sbjct  244  GAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  307  KA  308
            K+
Sbjct  303  KG  304

362) BN69_0375 in NC_018485


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 126/306 (42%), Positives = 206/306 (68%), Gaps = 12/306 (3%)

Query  5    DVSLVIPVFNEAQNlrs--laarlasaVDACDVSYEAIFVDDGSSDESLEILRDLCAEEP  62
             +SLV+PVFNE + +     + R    + + +V  E +F++DGS D +  I+  L   +P
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDP  59

Query  63   RFRALSLSRNFGKEVAIVAGLDETQGRAVVIMDADLQHPPEVIPQFIEKWREGYKNVYGQ  122
               +LS++RNFGKE A+ AGLD++ G AV+ +D DLQ+P EVIP++IEKW+ G   V ++
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  123  RIDRATDPKLRTAFTHVFYRLLENFGDVRLPPGAGDFRLLDRQAVDALLTMRERARFNKG  182
            R DR+TD +L+   ++ FY+L ++++  ++    GDFRL+ R+ V+ +  + ER  F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  LFAWIGFKSIGVPFDVEGRAGGTSKFNFVQLAQFALDGLMSFSSIPLKVWTYVGLAISAF  242
            +++W+G ++  V +    R +G SKFN  +L ++AL+G+ SFS++PL+VWTY+GL    F
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL----F  235

Query  243  AIAMAVYY--W--ARTMIFGVDTPGFPTLVVSIAFFSGVQLISLGVLGEYVARIFNEVKG  298
              +++  Y  W    T++FG    G+P+L+VSI F++GVQLI++GVLGEY++RI+ E K+
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  299  RPLYLV  304
            RP Y++
Sbjct  296  RPKYIL  301

363) KSO_013020 in NC_020272


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 206/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREQSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASLFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMLMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYMKLFTDSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

364) ykcC in NC_016784


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 206/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREQSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASLFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMLMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYMKLFTDSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

365) ykcC in NC_017061


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 206/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREQSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRNVTDIDIPLDTGDFRLLDRKVCDEMKKLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L  +++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYMKLFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L   + + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

366) ykcC in NC_017912


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 206/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREQSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRNVTDIDIPLDTGDFRLLDRKVCDEMKKLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L  +++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYMKLFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L   + + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

367) csbB in NC_006582


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  201 bits (747),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 131/302 (44%), Positives = 207/302 (69%), Gaps = 1/302 (0%)

Query  6    LSVIVPSFNEEENVEPFYFALRETLKDTHYRWEVIYIDDGSSDSTLPLLQRLSTWHPQVH  65
            +S++VP FNEEE +  FY ++RE      Y  E+++I+DGS D+T ++++ L+  +P V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  66   YVSFTRNFGKEAAIVAGFQHAKGDCVVVIDADLQHPVHLIKDLLEGFEEGYDQVIACR-D  124
             +SFTRNFGKE+A+ AG++HA GD V+ ID DLQ+P+++I +L+E  + G + V+A R D
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGEGFLRSTASKLYYKFINKIVDVELEDGVGDFRLLSRRAVDALLIMSEGNRFSKGLFS  184
            R  +G L+  ++  +YK+ NKI    +E+ VGDFRL+SR  V+ + +++E N F KG++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WIGFDQKVVYYENVSRQNGESKWSFSKLVNYGIDGIVSFNMKPLRICFYMGGFILAAALL  244
            W+G +  VV Y    R  G SK +  KL N +++GI SF+  PLR+  Y+G F+ + ++L
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  YIFIMFAQIIRTGIDVPGYFTIISAVLFLGGVQLVSLGIIGEYIGRIYNETKRRPHYLVK  304
            Y   M+ + +  G  V GY +++ ++LFLGGVQL+++G++GEYIGRIY ETK RP Y++K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  305  ET  306
              
Sbjct  303  KG  304

368) ykcC in NC_009725


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  201 bits (747),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 205/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREHSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYMKLFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L   + + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

369) ykcC in NC_020410


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  201 bits (747),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 205/301 (69%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREQSLIDPRVKI  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGSKD +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A+  ID DLQDP E+I ++IE+W+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTASMFYRLLRSVTDIDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL+  +Y G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MFIVLYMKLFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L   + + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  A  308
            +
Sbjct  304  G  304

370) BATR1942_04125 in NC_014639


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  201 bits (747),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 122/301 (41%), Positives = 208/301 (70%), Gaps = 0/301 (0%)

Query  8    SIVVPVYNEELVIQETYQRLKEVMDRTKENYELLFVNDGSRDRSVEILREHSLIDPTVKV  67
            S+VVPV+NEE  I   Y+ ++E  +    + E++F+NDGS+D +  I+   ++ DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILDMIEKWKEGYNVVYAVRTKR  127
            + F+RNFG + A+ AG+D A G+A++ ID DLQDP E+I ++IEKW+ G ++V A R+ R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQTAAMFYRLLRSMTDIDIPIDTGDFRLLDRKVCDEMKKLKEKNPFVRGLVSW  187
              +  +K++TA  FY+L   ++   I  + GDFRL+ R V +++K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASFAGILMSGAGFLY  247
            VG +   VEY R ER+AG +K+   K+ +L+++GIT+FS  PL++ ++ G+++++ +FLY
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  MLIVLYMKLFTDSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQK  307
               ++   L  ++ + G +SL+V  L+++G+ L+ +G++GEYIGRIY E+K RP YI++K
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  308  S  308
            +
Sbjct  304  G  304

371) Acin_0970 in NC_016077


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  200 bits (745),  Expect = 5e-53, Method: Compositional matrix adjust.
 Identities = 130/307 (43%), Positives = 200/307 (66%), Gaps = 13/307 (4%)

Query  4    KLSIVVPVFNEQENIHEFYRRVTEVMAPLSYDYELLFIDDGSRDQSAAMIRELADKDPHV  63
            K+S+VVPVFNE+E I  FY+ V E     +Y+ E++FI+DGS+D + ++I  LA  DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   EGYLFSRNYGHQLALTCGLEHAKGDAVISMDGDLQHPPEMIPELISLWESGYEIVQTVRK  123
                F+RN+G + AL  GL+HA GDAVI++D DLQ+P E+IP+LI  W++G E+V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  ATEDATFFKNITSSLYYKLINTMSEVRITPGGSDFRLMDRKAVDALNSYHERARFIRGMV  183
                   +K  T+  +YKL N +S  +I    +DFRLM R  V+ ++   ER  F++G++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  NNLGFRTTTLPFVAPPRFAGHSKFNLRKMLRFALDGITGFSRVPLRLAFYAGLIFGIGSl  243
            + +G +T  + +V + R AG SKFN +K+  +AL+GIT+FS  PLR+  Y GL+ +    
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA----  237

Query  244  llllHVLY-AWIM------DEAVPGWTTLAAAEFFLGGVELMGIGIVGEYVGRIFEEVKH  296
               +  LY AW++      +++V G  +L  + +FLGGV+L+GIG++GEY+GRI+ E K 
Sbjct  238  --SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  297  RPLYIVR  303
            RP YI++
Sbjct  296  RPKYILK  302

372) Cthe_3094 in NC_009012


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  200 bits (744),  Expect = 6e-53, Method: Compositional matrix adjust.
 Identities = 131/309 (43%), Positives = 209/309 (68%), Gaps = 12/309 (3%)

Query  8    SVVVPLYNEEEVILETYKRLKNVMESLNEPYE--IIFVNDGSKDRTGIIANEICNKDKTV  65
            S+VVP++NEEE I   YK +++  + L+ PYE  I+F+NDGSKD T  I N +   D  V
Sbjct  4    SLVVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  66   KLVDFARNFGHQTAITAGMDYSEGEAIVVIDADLQDPPELIPKMIEKWREGYDVVYGKRK  125
              + F+RNFG + A+ AG+D + G+A++ ID DLQDP E+IP +IEKW+ G ++V +KR 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  126  ERKGETFFKKFTAKVFYRFLRRMTDVDIPVDTGDFRLIDRKVCEALKLVNERNRYIRGII  185
            +R  +  +K+ TA  FY++  +++   I  + GDFRL+ R V E +KL+ ERN +++GI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  186  SWLGFKQTGIEFVREKRFAGETKYPLKKMLKFAADAITSFSYKPLKLASYFGMLLSFCSF  245
            SW+G +   +E+VR  R AG +K+   K+ ++A ++ITSFS  PL++ +Y+G++++  SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  246  VYLLVVIWMKL----FTDHVQQGWASTVAINLFFHGITLIILGIMGEYIGRIYDEAKGRP  301
            +Y     WM +    F + V+ G +S +   LF+ G+ LI +G++GEYIGRIY E+K+RP
Sbjct  242  LY---GAWMIIDTLVFGNPVR-GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  LYIVKQTRN  310
             YI+K+ R+
Sbjct  298  KYILKKGRK  306

373) Clo1313_0645 in NC_017304


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  200 bits (744),  Expect = 6e-53, Method: Compositional matrix adjust.
 Identities = 131/309 (43%), Positives = 209/309 (68%), Gaps = 12/309 (3%)

Query  8    SVVVPLYNEEEVILETYKRLKNVMESLNEPYE--IIFVNDGSKDRTGIIANEICNKDKTV  65
            S+VVP++NEEE I   YK +++  + L+ PYE  I+F+NDGSKD T  I N +   D  V
Sbjct  4    SLVVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  66   KLVDFARNFGHQTAITAGMDYSEGEAIVVIDADLQDPPELIPKMIEKWREGYDVVYGKRK  125
              + F+RNFG + A+ AG+D + G+A++ ID DLQDP E+IP +IEKW+ G ++V +KR 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  126  ERKGETFFKKFTAKVFYRFLRRMTDVDIPVDTGDFRLIDRKVCEALKLVNERNRYIRGII  185
            +R  +  +K+ TA  FY++  +++   I  + GDFRL+ R V E +KL+ ERN +++GI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  186  SWLGFKQTGIEFVREKRFAGETKYPLKKMLKFAADAITSFSYKPLKLASYFGMLLSFCSF  245
            SW+G +   +E+VR  R AG +K+   K+ ++A ++ITSFS  PL++ +Y+G++++  SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  246  VYLLVVIWMKL----FTDHVQQGWASTVAINLFFHGITLIILGIMGEYIGRIYDEAKGRP  301
            +Y     WM +    F + V+ G +S +   LF+ G+ LI +G++GEYIGRIY E+K+RP
Sbjct  242  LY---GAWMIIDTLVFGNPVR-GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  LYIVKQTRN  310
             YI+K+ R+
Sbjct  298  KYILKKGRK  306

374) CK1_39800 in NC_021014


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  200 bits (743),  Expect = 7e-53, Method: Compositional matrix adjust.
 Identities = 127/306 (42%), Positives = 205/306 (67%), Gaps = 1/306 (0%)

Query  1    MISLIIPCFNEEESLPLFYPEATSVLRQMNCDYELIFVNDGSRDRTLEILKELSEKDPHV  60
             ISL++P FNEEE++P+FY            + E++F+NDGS+D T  I++ L+  DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  61   IYLSFSRNFGKEAAMYAGFCNAGGDYVAVMDADLQDPPSLLPEMLEKLESGEYDSVATRR  120
            + LSF+RNFGKE+A++AG+ +A+GD V  +D DLQDP  ++P+++EK ++G  + V ++R
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKR  120

Query  121  VSRDGEPPIRSFFARKFYQLINKISDADIVDGARDFRLMKRSMVDAIVSMSEYNRFSKGI  180
              R  +  ++   A  FY+L NKIS + I +   DFRLM R +V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  FGWIGFRTCWLPYKNIERVAGETKWNFWKLFKYAVSGIINFSQVPLTIASWFGTTMTGFS  240
            ++W+G +T  + Y   ERVAG +K N WKL + A+ GI +FS  PL + + +G  ++++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FLVLVAIIVRKLIFDDPVPGWASTICVIIFIGGLQLFCLGIMGQYIAKTYMEVKQRPHYI  300
            FL    +I+  L+F++PV G +S +  I+F+GG+QL+ +G++G+YI++ Y+E K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  301  IAESNK  306
            +  + K
Sbjct  301  LKKGRK  306

375) MASE_03815 in NC_018632


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  199 bits (739),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 152/303 (51%), Positives = 219/303 (73%), Gaps = 2/303 (0%)

Query  16   TLSVVVPYFNEESVLCEFHARLTRVLDTLSD-TSEIVYVNDGSTDNSQSLVESFSSHTSS  74
             +S+VVP FNEE  +  F  +  R ++ L     EIV++NDGS D ++S++++++   + 
Sbjct  2    KISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   IKCIALSRNFGKEsalsaglahssglaVIAIDADLQDPPELIPAMLTKWREGFDVVNMQR  134
            +  ++++RNFGKE+AL AGL H+SG AVI+ID DLQDP E+IP ++ KW+ G ++V  +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  SERLGESWLKKKSAAVFYSLLNIMSQTDIPENVGDFRLIAREVVDHINALPERNRYMKGI  194
            S+R  +++LK+K+A  FY L N +S   I ENVGDFRL++REVV++I+ LPERN +MKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FSWPGFKQATLPFTRDPRFCGESKWNYFKLVGLAIDGITSFSIRPLRAATVLGLIIASSA  254
            +SW G +   + + R  R  G SK N  KL  LA++GITSFS  PLR  T +GL++AS +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FLYGLFVVSKTLLFGEPVSGYPSLMVVQLAlggiqlitigllgEYIGRIFIETKQRPLYL  314
            FLYG  ++  TL+FG+PV GYPSL+V  L LGG+QLI IG+LGEYIGRI++ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  IQS  317
            ++ 
Sbjct  301  LKK  303

376) MASE_19430 in NC_018632


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  199 bits (739),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 152/303 (51%), Positives = 219/303 (73%), Gaps = 2/303 (0%)

Query  16   TLSVVVPYFNEESVLCEFHARLTRVLDTLSD-TSEIVYVNDGSTDNSQSLVESFSSHTSS  74
             +S+VVP FNEE  +  F  +  R ++ L     EIV++NDGS D ++S++++++   + 
Sbjct  2    KISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   IKCIALSRNFGKEsalsaglahssglaVIAIDADLQDPPELIPAMLTKWREGFDVVNMQR  134
            +  ++++RNFGKE+AL AGL H+SG AVI+ID DLQDP E+IP ++ KW+ G ++V  +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  SERLGESWLKKKSAAVFYSLLNIMSQTDIPENVGDFRLIAREVVDHINALPERNRYMKGI  194
            S+R  +++LK+K+A  FY L N +S   I ENVGDFRL++REVV++I+ LPERN +MKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FSWPGFKQATLPFTRDPRFCGESKWNYFKLVGLAIDGITSFSIRPLRAATVLGLIIASSA  254
            +SW G +   + + R  R  G SK N  KL  LA++GITSFS  PLR  T +GL++AS +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FLYGLFVVSKTLLFGEPVSGYPSLMVVQLAlggiqlitigllgEYIGRIFIETKQRPLYL  314
            FLYG  ++  TL+FG+PV GYPSL+V  L LGG+QLI IG+LGEYIGRI++ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  IQS  317
            ++ 
Sbjct  301  LKK  303

377) AMEC673_04050 in NC_018678


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  199 bits (739),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 152/303 (51%), Positives = 219/303 (73%), Gaps = 2/303 (0%)

Query  16   TLSVVVPYFNEESVLCEFHARLTRVLDTLSD-TSEIVYVNDGSTDNSQSLVESFSSHTSS  74
             +S+VVP FNEE  +  F  +  R ++ L     EIV++NDGS D ++S++++++   + 
Sbjct  2    KISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   IKCIALSRNFGKEsalsaglahssglaVIAIDADLQDPPELIPAMLTKWREGFDVVNMQR  134
            +  ++++RNFGKE+AL AGL H+SG AVI+ID DLQDP E+IP ++ KW+ G ++V  +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  SERLGESWLKKKSAAVFYSLLNIMSQTDIPENVGDFRLIAREVVDHINALPERNRYMKGI  194
            S+R  +++LK+K+A  FY L N +S   I ENVGDFRL++REVV++I+ LPERN +MKGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FSWPGFKQATLPFTRDPRFCGESKWNYFKLVGLAIDGITSFSIRPLRAATVLGLIIASSA  254
            +SW G +   + + R  R  G SK N  KL  LA++GITSFS  PLR  T +GL++AS +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FLYGLFVVSKTLLFGEPVSGYPSLMVVQLAlggiqlitigllgEYIGRIFIETKQRPLYL  314
            FLYG  ++  TL+FG+PV GYPSL+V  L LGG+QLI IG+LGEYIGRI++ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  IQS  317
            ++ 
Sbjct  301  LKK  303

378) Ava_2346 in NC_007413


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  199 bits (738),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 127/305 (42%), Positives = 201/305 (66%), Gaps = 7/305 (2%)

Query  4    KYSFIVPIYNEEETITEMYRRISQVMDQMDGSVELCLVNDGSRDRSLRMMRELHQKDPRV  63
            K S++VP++NEEE+I   Y+ + +  +     VE+ ++NDGS+D +  ++  L   DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   VYLSLARNFGHQIAVTAGLNFARGQVVVILDADLQDPPELIAEMVELWRQGYHIIYAQRI  123
            V LS++RNFG + A+ AGL+ A G+ V+ +D DLQDP E+I++++E W+ G +++ A+R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  KRRQEGWFKRFTAYTFYRILKQLADVDIPTDTGDFCLLDRQVVDVLNAMPERNRYIRGLR  183
             R  +G++KR TA  FY++ ++++   I  + GDF L+ R+VV+ ++ +PERN +++G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  SWVGFNQTAVKFERDPRFAGDVKYTFRKSFALAINGIVSFSKVPLRLSTYLGLFAAIASL  243
            SWVG +   V + R  R AG  K+  +K   LA++GI SFS  PLR+ TY+GLF A  S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  LMCLLVLYWRIFTP---HSPLTGITIILIAIFFLGAVQLVSIGILGEYIGRIYEEVKQRP  300
            L       W I+      +P+ G   +L++I+FLG+VQL++IG+LGEYIGRIY E K RP
Sbjct  242  LYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  LYTLS  305
             Y L 
Sbjct  298  KYILK  302

379) Selsp_1571 in NC_015437


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  199 bits (739),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 206/303 (68%), Gaps = 0/303 (0%)

Query  4    ISIVVPVFNEEDNLEHFYQAISEVMAGAKYDFELIFVDDGSKDGSREILRRLEEKDARVQ  63
            IS+VVPVFNEE+ +  FY+++ E      Y+ E++F++DGSKD++  I+  L   D+ V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   PIFLSRNFGHQLALTCGLDHADGAAVITMDGDMQHPPALIPTLLAKWEEGFDVVQTIRET  123
            P+ ++RNFG + AL  GLDHA G AVI +D D+Q+P  +IP L+ KW+ G ++V + R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  TEGVGFLKRATSYWYYKALNKISRVHIQEGGSDFRLMDRKVVLEFRCYRERARFIRGMIG  183
                G LKR T+ W+YK  NKIS   I+E  +DFRLM R VV +++   ER  F++G+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  184  AMGYRQVQIRFVAPKRFAGVSKFSPRKMLHFALDGILAYSTVPLRLGLYSGFicgilsil  243
             +G +   + +V + R AG+SKF+ +K+ ++AL+GI ++ST PLR+  Y G++ + +S+L
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  244  lllhvlyikfiEGSAVPGWATITACVLLFGGLQLVALGILGEYIGRIFEEVKRRPLYLVA  303
                ++   ++ G++V G +++   +L++GG+QL+++G+LGEYIGRI+ E K RP Y++ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  304  RGK  306
            +G+
Sbjct  303  KGR  305

380) UCYN_05260 in NC_013771


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  198 bits (737),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 216/302 (72%), Gaps = 0/302 (0%)

Query  8    IEMSVIIPFYNEERGLEHLFTRVLGVLDRLNLSYEVICVDDGSQDQTLKNLINYHYLYPE  67
            + +S+++P +NEE ++  ++  V    +      E++ ++DGS+D T   +       P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  68   IKIISLSRNFGKDVALTAGLENAQGQVIIPIDADLQDPPELIEKLLQKWREGYDVVYGKR  127
            +  +S++RNFGK+ AL AGL++A G+ +IPID DLQDP E+I  L++KW+ G ++V +KR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  128  RSRQGESLVKRFTANAFYkviskissvsiPQDTGDFRLLDKKVVDALKTMPERTRFMKGL  187
              R  ++ +KR TA+ FYK+ +KIS+  I ++ GDFRL+ + VV+ +K +PER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  188  FAWVGFKQTYIIYDRPSRFQGTSKWNYWQLWNFALDGITSFSLIPLKVWSYLGVSVSFLS  247
            ++WVG +   + Y R+ R  G SK N W+LWN+AL+GITSFS +PL+VW+Y+G+ V+ +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  248  FMYGSFLIIRTLVLGIDVPGYASLMVttlfigglqlitlgilgEYLGRIYEETKQRPLYL  307
            F+YG+ +II TLV+G  V GY+SL+V+ LF+GG+QLI +G+LGEY+GRIY ETK RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  308  IK  309
            +K
Sbjct  301  LK  302

381) SANR_0674 in NC_022239


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  198 bits (736),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 140/309 (46%), Positives = 205/309 (67%), Gaps = 12/309 (3%)

Query  1    MTISIIVPCFNEEESLPLFYAEMEKIKFQINDHFE--YIFVNDGSKDRTLQILRDLNQVD  58
            M IS++VP FNEEE++P+FY  +    FQ    +E   +F+NDGSKD T  I+  L   D
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE--FQELKPYEVEIVFINDGSKDATESIINALAVSD  58

Query  59   KSVHYLSFSRNFGKEAALYAGLKHATGDLVTVMDADLQDPPELLLTMKFMLEK-NPDLDC  117
              V  LSF+RNFGKE+AL+AGL HA+GD V  +D DLQDP E++     ++EK +++ + 
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVI---PHLIEKWQAGAEM  115

Query  118  VGTRRTTRDGESPIRSFFANLFYKLINKISQVEMVDGARDFRLMRRQMVDAILEVSEYNR  177
            V ++R+ R  ++ ++   A+ FYKL NKIS   + +   DFRLM R++V+ I  ++E N 
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  178  FSKGIFAWVGFKTEYLEYKNVERVAGKTSWSFWQLLNYSLEGIINFSDAPLTIAFWG--G  235
            F KGI++WVG +T+ +EY   ERVAG +  + W+L N +LEGI +FS  PL +  W   G
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIG  233

Query  236  IVACLLAFFLIMIVIIRTLIFGDPTAGWPSMVSIILFLGGFQLLTIGILGKYIGKIFMET  295
            +    ++F+    +II TL+FG+P  G PS++  ILFLGG QL+ IG+LG YIG+I++ET
Sbjct  234  LFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  296  KKRPIYVVK  304
            K RP Y++K
Sbjct  294  KSRPKYILK  302

382) gtrB in NC_009009


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  198 bits (735),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 138/309 (45%), Positives = 210/309 (68%), Gaps = 4/309 (1%)

Query  1    MTISVIVPCFNEEESIPLFHEAMEAVKYQIRDQFEYIFVNDGSTDQTLAVLRELSSRCPD  60
            M IS++VP FNEEE+IP+F  ++   +     + E +F+NDGS D T +++  L+   P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VHYLSFSRNFGKEAALYAGLQEASGEFVTVMDVDLQDPPELLIEMKAFLDSNPELDCVGT  120
            V  LSF+RNFGKE+AL+AGL++ASG+ V  +DVDLQDP E++ ++    ++ +E+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRTTREGEPPIRSFFANLFYKLINKISQVEMVDGARDFRLMRRQMVEAILEVSEYNRFSK  180
            +R+ R  +  ++   A+ FYKL NKIS   + +   DFRLM R++VE I  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFNTEYLEYKNVERVAGKTSWNFWSLFNYSLEGIVNFSDAPLNI-AFLGGILSW  239
            GI++WVG +T+ +EY   ERVAG +  N W L N +LEGI +FS  PL + +++G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA-  237

Query  240  ILAFILMAVIIIRTLVFGDPTSGWPSLMTVILLIGGFQLLTIGILGKYIGKIFMETKHRP  299
             ++F+  A +II TLVFG+P  G PSL+  IL++GG QL+ IG+LG YIG+I++ETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  IYVIKEKSK  308
             Y++K   K
Sbjct  298  KYILKKGRK  306

383) Fbal_2836 in NC_014541


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  198 bits (734),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 138/301 (46%), Positives = 223/301 (75%), Gaps = 0/301 (0%)

Query  15   ITLSVIVPLYNETEVLPALHQRLTQVLDAMPERCEIVFVDDGSKDGSHQMAQHLPRSSSE  74
            + +S++VP++NE E +P + + + +  +  P   EIVF++DGSKD+++ + + L+ S + 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   HLCLSLSRNFGKEAAMSAGLAYARGQAVILLDADLQDPPELIPDMLAKWREGYDVVNMQR  134
             + LS++RNFGKE+A+ AGL  A G+AVI +D DLQDP E+IP+++ KW+ G ++V  +R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  RRRLGESWFKRTSAAAYYRILNWLSEMPIPENVGDFRLLSRQVVDQLNALPERSRYMKGL  194
              R  ++++KR +A  +Y++ N +S   I ENVGDFRL+SR+VV++++ LPER+ +MKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FAWPGFKQITLQFDRDPREAGDTKWNYPKLVGLAMDGITSFSIRPLRLATWTGLTIALGA  254
            ++W G +   +++ R  R AG +K N  KL  LA++GITSFS  PLR+ T  GL +A  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FLYGGWVVAKTLLWGETVAGYPSlmvavlalggvqlvamgllgEYLGRVYIETKGRPNYL  314
            FLYG+W++  TL+ G+ V GYPSL+V++L LGGVQL+++G+LGEY+GR+Y+ETK+RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  V  315
            +
Sbjct  301  L  301

384) ykcC in NC_017542


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  198 bits (735),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 122/304 (41%), Positives = 210/304 (70%), Gaps = 3/304 (0%)

Query  5    IRYSIVIPMYNEEAVITETYRRLKQVMGSMGEPYELIFVNDGSSDRSVQLIKEFSLRDDT  64
            ++ S+V+P++NEE  I   Y+ +++         E++F+NDGS D +  +I+ +++ D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   IVLIDFSRNFGHQLAITAGMDYAVGEAVVVIDADLQDPPELIVEMANKWKEGYEVVYAKR  124
            +V + F+RNFG + A+ AG+D A G+AV+ ID DLQDP E+I ++ +KW+ G E+V AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  LKRNGETRFKKWSASLFYRVLKASTDINIPVDTGDFRLMDRKVIDELKRLPENNRFVRGL  184
              R+ + R+K+ +A  FY++ +  +  +I  + GDFRLM R V++++K LPE N F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  VSWIGFKQTAVEYERDERLAGETKYPLKRMIKLSLDGITSFSIKPLKLAGYIGALLSMSG  244
            +SW+G +   VEY R ER+AG +K+   ++ +L+L+GITSFS  PL++  YIG +++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FLYLMYVLFLNF-FTDSYVMKGWSSMISISLIFDGVILIILGIMGEYIGRIYDETKARPL  303
            FLY   +++  + F ++  ++G +S++   L+++GV LI +G++GEYIGRIY ETK+RP 
Sbjct  241  FLYGAWMIIDTLVFGNP--VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  304  YIVR  307
            YI++
Sbjct  299  YILK  302

385) PPSC2_c0378 in NC_014622


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  198 bits (735),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 122/304 (41%), Positives = 210/304 (70%), Gaps = 3/304 (0%)

Query  5    IRYSIVIPMYNEEAVITETYRRLKQVMGSMGEPYELIFVNDGSSDRSVQLIKEFSLRDDT  64
            ++ S+V+P++NEE  I   Y+ +++         E++F+NDGS D +  +I+ +++ D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   IVLIDFSRNFGHQLAITAGMDYAVGEAVVVIDADLQDPPELIVEMANKWKEGYEVVYAKR  124
            +V + F+RNFG + A+ AG+D A G+AV+ ID DLQDP E+I ++ +KW+ G E+V AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  LKRNGETRFKKWSASLFYRVLKASTDINIPVDTGDFRLMDRKVIDELKRLPENNRFVRGL  184
              R+ + R+K+ +A  FY++ +  +  +I  + GDFRLM R V++++K LPE N F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  VSWIGFKQTAVEYERDERLAGETKYPLKRMIKLSLDGITSFSIKPLKLAGYIGALLSMSG  244
            +SW+G +   VEY R ER+AG +K+   ++ +L+L+GITSFS  PL++  YIG +++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FLYLMYVLFLNF-FTDSYVMKGWSSMISISLIFDGVILIILGIMGEYIGRIYDETKARPL  303
            FLY   +++  + F ++  ++G +S++   L+++GV LI +G++GEYIGRIY ETK+RP 
Sbjct  241  FLYGAWMIIDTLVFGNP--VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  304  YIVR  307
            YI++
Sbjct  299  YILK  302

386) I872_01815 in NC_021175


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  197 bits (733),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 137/309 (45%), Positives = 208/309 (68%), Gaps = 4/309 (1%)

Query  1    MAISVIVPCFNEEESIPLFHEAMEAVKYQIRDQFEYIFVNDGSTDRTLDVLRELSSRCPD  60
            M IS++VP FNEEE+IP+F  ++   +     + E +F+NDGS D T  ++  L+   P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VHYLSFSRNFGKEAALYAGLQEASGDLVTVMDVDLQDPPELLIEMKAMLDTNPELDCVGT  120
            V  LSF+RNFGKE+AL+AGL++ASGD V  +DVDLQDP E++ ++    ++ +E+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRTTREGEPPIRSFFANLFYKLINKISQVEMVDGARDFRLMRRPMVDAVLEVSEYNRFSK  180
            +R+ R  +  ++   A+ FYKL NKIS   + +   DFRLM R +V+ +  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFNTEYLEYKNVERVAGKTSWNFWSLFNYSLEGIVNFSDAPLNI-AFLGGILSW  239
            GI++WVG +T+ +EY   ERVAG +  N W L N +LEGI +FS  PL + +++G +++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA-  237

Query  240  ILAFILMAVIIIRTLVFGDPTSGWPSLMTVILLIGGFQLLTIGILGKYIGKIFMETKKRP  299
             ++F+  A +II TLVFG+P  G PSL+  IL++GG QL+ IG+LG YIG+I++ETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  VYVVKEKSK  308
             Y++K   K
Sbjct  298  KYILKKGRK  306

387) Mmwyl1_2662 in NC_009654


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  197 bits (733),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 139/304 (46%), Positives = 218/304 (72%), Gaps = 4/304 (1%)

Query  27   VSVIIPFLNEADVLAVCHQRVCEALSKLQQY-CEIIYIDDGSNDNSWKMVSQFKHPLHQI  85
            +S+++P +NE + ++V  + V E +  L+ Y  EI++I+DGS+D +  +++ +  +   +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  86   RSLRLSRNFgkeaamsagmkaasGRCVILLDADLQDPPEYIPDMVQAWQDGAQVVEMQRR  145
             +L ++RNFGKE+A+ AG+  ASG  VI +D DLQDP E IP++++ WQ GA++V  +R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  146  ERHGESWVKRTTAHCFYRFMSKISDHPITENVGDFRLMDQKVVNVINTLPERTRFMKGLL  205
            +R  ++++KR TA+ FY++ +KIS   I ENVGDFRLM + VV+ I+ LPER  FMKG+L
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  206  AWPGFTRKVLTFDRDPRLAGDTKWNYPKLIHLALEGITSFSTKPLR-WATMAGLTTSAIA  264
            +W G    V+ + R  R+AG +K N  KL +LALEGITSFST PLR W+ + GL  ++I+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYI-GLFVASIS  240

Query  265  FIMALIIFTKTIVWGDPVAGYPSTILVVLFLGGIQLLSIGVLGEYVGRLFIESKQRPLYV  324
            F+ +  ++  T+V G+PV GYPS ++ +LFLGG+QL++IGVLGEY+GR+++E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  325  LMED  328
            L  +
Sbjct  301  LKKG  304

388) CtCNB1_0426 in NC_013446


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  197 bits (732),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 135/301 (45%), Positives = 219/301 (73%), Gaps = 5/301 (1%)

Query  27   VVPAYNEQANIEGFLRALAQTVRALTP-DFEIVVVNDGSRDGTHEL--SLRLAQELPLRY  83
            VVP +NE+  I  F +++ +  + L P + EIV +NDGS+D+T+ +  +L +++ L +  
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP-  63

Query  84   LALSRNFGKEAALSAGIDHARGNAVLLIDADFQHPLEMLAEMHGLWQSGYEMIYGVIADR  143
            L+++RNFGKE+AL AG+DHA G+AV+ ID D+Q+P+E+++++   WQ+G EM+ +  +DR
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  144  GAESGAKRVGTDLFYRVMNSGSAVKMPPNAGDFRWMDRKVVDALKALPENNRFMKGLYAW  203
            ++++  KR  ++ FY++ N  S+ K+  N GDFR M R VV+ +K LPE N FMKG+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  204  VGFKAAALPFVPKDRVAGSSSFNlrrlgslallgltsfttlPLRVWSMVGAGISLLALAY  263
            VG ++  + +V  +RVAG S FN ++L +LAL G+TSF+T+PLRVW+ +G  ++ +++ Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  264  GLWIAAEALFFGNPLRGWPTLAASIMLFSGVQLLSIGILGEYIGRIYEEVKRRPIYLVAH  323
            G W+  ++L FGNP+RG P+L  SI++++GVQL++IG+LGEYIGRIY E K RP Y++  
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  324  D  324
            +
Sbjct  304  G  304

389) rfaG in NC_019425


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  197 bits (731),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 131/307 (43%), Positives = 207/307 (68%), Gaps = 3/307 (0%)

Query  6    ISIVVPCFNEEESIPLFYAALEKERESLINADIEYIFVNDGSKDNTLNVLRILAKEDKER  65
            IS+VVP FNEEE+IP+FY ++ +E + L   ++E +F+NDGSKD T +++  LA  D   
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  66   VKFISFSRNFGKEAGLYAGLQQATGDYVAVMDVDLQDPPEMLPEMLQIIREEEYDCVGTR  125
            V  +SF+RNFGKE++L+AGL++A+GD V  +DVDLQDP E++P++++  ++   + V ++
Sbjct  62   VP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEK-WQAGAEMVLAK  119

Query  126  RVSRDGEPPIRSFFARQFYRIINNISETEIVDGARDYRLMTRQMVNAILSMEEYNRFSKG  185
            R  R  +  ++   A  FY++ N+IS   I +   D+RLM+R++V+ I  + E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  186  IFSWVGFDTKYLEYKNQERVAGETSWSFWSLFKYSLDGIVAFSELPLAFASFVGFFSFLA  245
            I+SWVG +T  +EY   ERVAG +  + W L + +L+GI +FS +PL   +++G+F    
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  246  AMIAMVVIVIRTLLFNDPTSGWPSLVCFILAIGGLQLFCLGILGKYLGKTYLETKKRPIY  305
            + +    ++I TL+F +P  G PSL+  IL +GG+QL+ +G+LG Y+G+ YLETK RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  306  IVKETEK  312
            I+K   K
Sbjct  300  ILKKGRK  306

390) lin2695 in NC_003212


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  197 bits (730),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 129/301 (43%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESVVKLYETIVEVMGAIKDKYTFELLFINDGSKDNTLEIVKQLHEKDDR  63
            I++ VP +NE+E++  +Y T+ E    +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELITQMVELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I +++E W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKSYYKMLQKVTKTPVLPDTGDFRLLDRRCVDAIKKLRETQRYTKGL  183
            + R  +++LK+ T+  +YK+ +K++   +  + GDFRL+ R  V+ IK L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTWPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FiyliyiliKTLIMGSNASGFPTLMITILFLGGIQLTSIGIIGEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+   G+P+L+++ILFLGG+QL +IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

391) Caci_8842 in NC_013131


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  197 bits (731),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 124/302 (42%), Positives = 209/302 (70%), Gaps = 1/302 (0%)

Query  1    MRLSLVVPCFNEEAVLARFHEVVRAETAGIADEVELVFVDDGSRDGTLELLKKIAAQDPE  60
            M++SLVVP FNEE  ++ F   VR      + EVE+VF++DGS+D+T  +++ +A  DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   AKYVSLSRNFGKESAILAGLKRASGDAVIILDADLQHPPALLGRMIDLHKQGFDQVIAQR  120
               +S++RNFGKE+A++AGL +ASGDAVI +D DLQ+P  ++ ++I+  + G + V+A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  -DREGDKRFKSLVAKTYYKLINRMVDVELVDGVGDFRLLSRRAVNALLEMPEYNRFSKGL  179
             DR  D R+K   A  +YKL N++    + + VGDFRL+SR  V+ +  +PE N F KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  180  FAWIGFDSVTFNYRNAVREAGETKWSFRRLLDYGVDSLLSFNNKPLRLAIYLGFLFFGVS  239
            ++W+G ++   +Y  A R AG +K + ++L + +++++ SF+  PLR+  Y+G++  ++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  240  FVYMVWLIVRTMVSGDTTPGYVTTIAAIVGIGGLQMFTVGVIGEYVGRIYYESKQRPHYL  299
            F+Y  W+I+ T+V G+   GY + + +I+ +GG+Q++ +GV+GEY+GRIY E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  300  VK  301
            +K
Sbjct  301  LK  302

392) Clo1100_0988 in NC_016791


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 130/301 (44%), Positives = 205/301 (69%), Gaps = 4/301 (1%)

Query  6    LSIVVPVYNEQEVINETFKRLSG--VFENYFMDVEYIFINDGSKDNTYLKLREIALANSC  63
            +S+VVPV+NE+E I   +K +     +  Y  +VE +FINDGSKD T   +  +A++++ 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPY--EVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VRVINFARNFGHQIAITAGMDYAKGDAVVIIDADLQDPPEVILQMVEQWEQGYEVVYGKR  123
            V  ++F+RNFG + A+ AG+D A GDAV+ ID DLQDP EVI +++E+W+ G E+V +KR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  LQREGETFFKKFTAKMFYRFLDSMTDVKLPVDVGDFRLIDRKVCDAMKCLPERSRYVRGL  183
             +R  +  +K+ TA  FY++ + ++  K+  +VGDFRL+ R V + +K LPER+ +++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  VSWVGFKQTSVEYRREKRFAGETKYPLKKMLKLAGDGIFSFSYKPLKLATFAGMLVSIIS  243
            +SWVG +   VEY R  R AG +K+   K+ +LA +GI SFS  PL++ T+ G++V+ IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIVVLIQRFVKNDIASGWASSMAVSLFFNGVMLIVIGIMGEYVGRIYEEVKARPLYI  303
            F+Y   ++I+ +V  +   G +S +   LF+ GV LI IG++GEY+GRIY E K+RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  I  304
            +
Sbjct  301  L  301

393) PCC8801_0385 in NC_011726


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 133/310 (43%), Positives = 212/310 (69%), Gaps = 14/310 (4%)

Query  1    MLISVIIPCYNEEAVINETNCRLISVIQGITP-NFELIYVDDGSQDKTADLLRQLQQNDP  59
            M IS+++P +NEE  I     + +  +Q + P + E+++++DGS+D T  ++  L  +DP
Sbjct  1    MKISLVVPVFNEEEAIP-VFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   RIRTILLSRNFGHQMAVTAGLDHATGDAIVLIDADLQDPPEVIEQMVYQWSQGYHVAYGV  119
             +  + ++RNFG + A+ AGLDHA+GDA++ ID DLQDP EVI +++ +W  G ++  + 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RTERIGETAFKRWTAKAFYRLMNQLSDVPIPLDTGDFRLMDRQVVEALKLMPERDRFLRG  179
            R++R  +  +KR TA  FY+L N++S   I  + GDFRLM R+VVE +KL+PER+ F++G
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  180  MISWVGFKQVAVPYQRAPRLAGVSKYPFWKMVRFATDGILSFSLVPLRMAIWT--GLFTF  237
            ++SWVG +   V Y RA R+AG+SK+  WK+  +A +GI SFS  PLR  +WT  GLF  
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLF--  235

Query  238  GLSLIGIIYA--LIIR--LFTKSWVEGWTLLFISVLFIGGIQLVFLGVIGEYIGRIYREN  293
             ++ I+++Y+  +II   +F ++ V G   L++S+LF+GG+QL+ +GV+GEYIGRIY E 
Sbjct  236  -VASISFLYGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  294  KQRPLYLVRE  303
            K RP Y+++ 
Sbjct  294  KSRPKYILKK  303

394) Cyan8802_0394 in NC_013161


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 133/310 (43%), Positives = 212/310 (69%), Gaps = 14/310 (4%)

Query  1    MLISVIIPCYNEEAVINETNCRLISVIQGITP-NFELIYVDDGSQDKTADLLRQLQQNDP  59
            M IS+++P +NEE  I     + +  +Q + P + E+++++DGS+D T  ++  L  +DP
Sbjct  1    MKISLVVPVFNEEEAIP-VFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   RIRTILLSRNFGHQMAVTAGLDHATGDAIVLIDADLQDPPEVIEQMVYQWSQGYHVAYGV  119
             +  + ++RNFG + A+ AGLDHA+GDA++ ID DLQDP EVI +++ +W  G ++  + 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RTERIGETAFKRWTAKAFYRLMNQLSDVPIPLDTGDFRLMDRQVVEALKLMPERDRFLRG  179
            R++R  +  +KR TA  FY+L N++S   I  + GDFRLM R+VVE +KL+PER+ F++G
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  180  MISWVGFKQVAVPYQRAPRLAGVSKYPFWKMVRFATDGILSFSLVPLRMAIWT--GLFTF  237
            ++SWVG +   V Y RA R+AG+SK+  WK+  +A +GI SFS  PLR  +WT  GLF  
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLF--  235

Query  238  GLSLIGIIYA--LIIR--LFTKSWVEGWTLLFISVLFIGGIQLVFLGVIGEYIGRIYREN  293
             ++ I+++Y+  +II   +F ++ V G   L++S+LF+GG+QL+ +GV+GEYIGRIY E 
Sbjct  236  -VASISFLYGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  294  KQRPLYLVRE  303
            K RP Y+++ 
Sbjct  294  KSRPKYILKK  303

395) LGMK_03180 in NC_015734


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 129/307 (43%), Positives = 212/307 (70%), Gaps = 7/307 (2%)

Query  16   LSLVVPVHNEEATIQTFYETVSALKNKLTATIHYHFIDDGSTDSTLSILRELAHQDENVH  75
            +SLVVPV NEE +I  FY TV  +++     ++  FI+DGS D+T SI+  LA  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  76   YISFSRNFGKEAGLYAGLQQTTGQYVAVMDVDLQDPPELLPQMLHEVQNGDYDAVGTRRA  135
             +SF+RNFGKE++L+AGL++++G+ V  +DVDLQDP E++P++++  Q G  + V ++R+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRS  121

Query  136  DRAGEAKIRSWFSAQFYVWMNKISETQLVDGARDYRVMTRQMVNAILSMSENQRFSKGIF  195
            DR+ +++++   +  FY   NKIS  ++ +   D+R+M+R++V+ I  ++E + F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  196  SWVGFKTKYISFENRERTAGST---SWSFWSLSKYAIEGIVSFSTFPLTIITGLGFVSFI  252
            SWVG +T  + +   ER AG +   +W +W+L   A+EGI SFSTFPL + T +G+    
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVAS  238

Query  253  ISLMSAAFIVIRALVYNNSVDGWPSMVTIILFIGGIQLLSLGVIGRYIAAIFLESKHRPI  312
            IS++ +A ++I +LV+ N+V G PS++  ILF+GG+QL+++GV+G YI+ I+LE+K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  313  YITREEK  319
            YI +  +
Sbjct  299  YILKKGR  305

396) LKI_08935 in NC_014136


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 129/307 (43%), Positives = 212/307 (70%), Gaps = 7/307 (2%)

Query  16   LSLVVPVHNEEATIQTFYETVSALKNKLTATIHYHFIDDGSTDSTLSILRELAHQDENVH  75
            +SLVVPV NEE +I  FY TV  +++     ++  FI+DGS D+T SI+  LA  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  76   YISFSRNFGKEAGLYAGLQQTTGQYVAVMDVDLQDPPELLPQMLHEVQNGDYDAVGTRRA  135
             +SF+RNFGKE++L+AGL++++G+ V  +DVDLQDP E++P++++  Q G  + V ++R+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRS  121

Query  136  DRAGEAKIRSWFSAQFYVWMNKISETQLVDGARDYRVMTRQMVNAILSMSENQRFSKGIF  195
            DR+ +++++   +  FY   NKIS  ++ +   D+R+M+R++V+ I  ++E + F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  196  SWVGFKTKYISFENRERTAGST---SWSFWSLSKYAIEGIVSFSTFPLTIITGLGFVSFI  252
            SWVG +T  + +   ER AG +   +W +W+L   A+EGI SFSTFPL + T +G+    
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVAS  238

Query  253  ISLMSAAFIVIRALVYNNSVDGWPSMVTIILFIGGIQLLSLGVIGRYIAAIFLESKHRPI  312
            IS++ +A ++I +LV+ N+V G PS++  ILF+GG+QL+++GV+G YI+ I+LE+K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  313  YITREEK  319
            YI +  +
Sbjct  299  YILKKGR  305

397) amb0228 in NC_007626


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (726),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 132/304 (44%), Positives = 212/304 (70%), Gaps = 4/304 (1%)

Query  49   TLSVVIPCYNEGENVPLLF--ARLLPALEGLGVSFEVICINDGSrddtldrlldlQKGES  106
             +S+V+P +NE E +P+++   R +  L    V  E++ INDGS+D T   +  L  +++
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDP  59

Query  107  RLRVIDLSRNFGKEKALSAGLFHSRGQAVVPMDADLQHPPEAIAHMLAKWRDGYEVVFAR  166
             +  + ++RNFGKE AL AGL H+ G+AV+P+D DLQ+P E I+H++ KW+ G E+V+A+
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  167  RDARTGQGLSEKIFAKGFYWVFDHLSDVRLPREVGDFRLMDRKVVDTINQMPERSRFMKG  226
            R  R+ +G   +  A  FY + + +S  ++  +VGDFRLM R VV+ I+ +PER+ FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  227  IFAWVGYRQAEIIYHQGERAAGTTKFNSLKLLGFAFDGLTSFSNFPLRVWGWVGAMVSSL  286
            I++WVG +   + Y ++ER AG +KFN+ KL  +A++G+TSFS FPLRVW  +G  V+S+
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  287  AFLYIVFRLIRTMIWGIDVPGYESTLMSVLFlggiqlltlgiigDYLGRVFDEVKGRPLF  346
            +FLY    +I T++ G  V GY S L+S+LFLGG+QL+ +G++G+Y+GR++ E K+RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  347  IVRQ  350
            I+++
Sbjct  300  ILKK  303

398) gtrB in NC_017549


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (726),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 204/302 (68%), Gaps = 6/302 (1%)

Query  17   LSVVVPVFNEEAVLPAFHQRLGAVLGDLGDDCEVLYVDDGSTDRSATILAQLQAADRQVG  76
            +S+VVPVFNEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRLINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY+L N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIAYSRAARVAGHSKWRYWRLWNFALEGITGFSTAPLKVagylgllsllaal-  255
            WVG +   + Y RA RVAG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  256  ----atllagIFGQQEIHEHWPVIAALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLI  311
                  + + +FG+  ++   +++ +++++GG+QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  DR  313
             +
Sbjct  302  KK  303

399) Caur_0338 in NC_010175


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (726),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 128/309 (42%), Positives = 210/309 (68%), Gaps = 12/309 (3%)

Query  9    SVVAPVYNEEQLIAEFCRRVIAALEPLGEPFE--LVLVNDGCRDRSPEIMRELHQRDPRI  66
            S+V PV+NEE+ I+ F +  +  ++ L  P+E  +V++NDG +D +  I+  L   DP +
Sbjct  4    SLVVPVFNEEEAIPVFYK-TVREFQEL-KPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  67   KVINFSRNFGHQIAITAGTDYATGKAVIVIDSDLQDPPEVIPELIARWREGYQvvygvre  126
              ++F+RNFG + A+ AG D A+G AVI ID DLQDP EVIP+LI +W+ G ++V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  127  eregeTWFKKTTAAIFYRLIVRITNVNIPVDTGDFRLMDRKVVDALKRMREHHRFMRGLS  186
            +R  + ++K+ TA  FY+L  +I+  +I  + GDFRLM R VV+ +K + E++ FM+G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  187  AWIGFRQTGVPYRRHARAAGTTKYPLRKMLRFALDGITSFSYLPLQLATYLGFIVAAISM  246
            +W+G +   V Y R  R AG +K+  +K+  +AL+GITSFS +PL++ TY+G++VA+IS 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  247  IF--LLVVFVMRLADPSAPEPAFYGQASTLASVLFLGAVQLISLGIIGEYVGRIYDEVKG  304
            ++   +++  + +++P    P++      L S+LFLG+VQLI++G++GEY+GRIY E K+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSL------LVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  305  RPLYIVAEA  313
            RP YI+  +
Sbjct  296  RPKYILKKG  304

400) Chy400_0363 in NC_012032


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (726),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 128/309 (42%), Positives = 210/309 (68%), Gaps = 12/309 (3%)

Query  9    SVVAPVYNEEQLIAEFCRRVIAALEPLGEPFE--LVLVNDGCRDRSPEIMRELHQRDPRI  66
            S+V PV+NEE+ I+ F +  +  ++ L  P+E  +V++NDG +D +  I+  L   DP +
Sbjct  4    SLVVPVFNEEEAIPVFYK-TVREFQEL-KPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  67   KVINFSRNFGHQIAITAGTDYATGKAVIVIDSDLQDPPEVIPELIARWREGYQvvygvre  126
              ++F+RNFG + A+ AG D A+G AVI ID DLQDP EVIP+LI +W+ G ++V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  127  eregeTWFKKTTAAIFYRLIVRITNVNIPVDTGDFRLMDRKVVDALKRMREHHRFMRGLS  186
            +R  + ++K+ TA  FY+L  +I+  +I  + GDFRLM R VV+ +K + E++ FM+G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  187  AWIGFRQTGVPYRRHARAAGTTKYPLRKMLRFALDGITSFSYLPLQLATYLGFIVAAISM  246
            +W+G +   V Y R  R AG +K+  +K+  +AL+GITSFS +PL++ TY+G++VA+IS 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  247  IF--LLVVFVMRLADPSAPEPAFYGQASTLASVLFLGAVQLISLGIIGEYVGRIYDEVKG  304
            ++   +++  + +++P    P++      L S+LFLG+VQLI++G++GEY+GRIY E K+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSL------LVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  305  RPLYIVAEA  313
            RP YI+  +
Sbjct  296  RPKYILKKG  304

401) AM1_3099 in NC_009925


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (726),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 204/304 (68%), Gaps = 7/304 (2%)

Query  23   SFVIPIYNEEENIAELYQRLQALIKTLDGSAELILVDDGSCDRTLPLIRQLHQDDPTVRY  82
            S+V+P++NEEE I+ +Y+ ++ +        E+++++DGS D T ++I  L   DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  83   VSLARNFGHQIALTAGLQFATGQAIIVMDADLQDPPEVVPDLIQQWQQGYQVVYAQRISR  142
            +S++RNFG + AL AGL+ A+G+A+I +D DLQDP EV+P+LI++WQ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  143  QREGIIKRLTAYLFYRFLQQLSDIHIPTDTGDFCLMDRQVVDLLNQMPERNRYIRGLRAW  202
              +G +KR TA  FY++ +++S   I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  203  VGFRQTAITLHRPPRFAGDVKYTFHKSLTLALSSIMAFSKVPLRLATYLGLFASALAVFM  262
            VG +   +   R+ R AG  K+   K   LAL +I +FS  PLR+ TY+GLF ++++   
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS---  240

Query  263  MFLTLYWRFFNP---SSQLIGYTMITMAIFFLGAVQLICLGILGEYVGQIYEEIKGRPLY  319
             FL   W +++    ++ + GY  + ++I+FLG+VQLI +G+LGEY+G+IY E K+RP Y
Sbjct  241  -FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  320  TVKE  323
             +K 
Sbjct  300  ILKK  303

402) Ple7327_1845 in NC_019689


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  196 bits (729),  Expect = 9e-52, Method: Compositional matrix adjust.
 Identities = 125/302 (42%), Positives = 204/302 (68%), Gaps = 7/302 (2%)

Query  9    SLVIPIYNEEENISELYRRVSAVMDRLNSPSELILINDGSRDKSLEMMRDLHQRDKRVCY  68
            SLV+P++NEEE I+ +Y+ V    +      E+++INDGS+D +  ++  L   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   LSLARNFGHQVAVTAGLNFARGRVVIVLDADLQDPPELIPDMIEMWRQGYQVVYAQRIKR  128
            LS++RNFG + A+ AGL+ A G  VI +D DLQDP E+IP++IE W+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  HKESWFKRFTAYAFYRLLKSLADVNIPTDTGDFCLMDRQVVDLLNRMPERNRYIRGLRSW  188
              ++++KR TA  FY+L + ++  +I  + GDF LM R+VV+ ++ +PERN +++G+ SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  VGFRQTAVKFERDPRFAGEVKYTFRKSLSLAINSLVSFSRIPLRLASYLGLISAVFSILM  248
            VG +   V + R  R AG  K+  +K  +LA++++ SFS +PLR+ +Y+GL+ A +S+L 
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  ACLILYWRLLEP---NSPVTGFATIAIAVFFIGSVQLICIGILGEYIGRIYEEVKGRPLY  305
            +     W +++     +PV G++++ ++++F+G+VQLI IG+LGEYIGRIY E K+RP Y
Sbjct  244  GA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  306  TL  307
             L
Sbjct  300  IL  301

403) Cri9333_2706 in NC_019753


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (725),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 128/302 (43%), Positives = 208/302 (69%), Gaps = 7/302 (2%)

Query  6    SLVIPIYNEQETILELYRRVSAVMDRLDGTVELVLINDGSRDQSLKLIREIHQQDQRVCY  65
            SLV+P++NE+E+I  +Y+ V    +     VE+V+INDGS+D +  +I  +   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  66   LSFARNFGHQIAVTAGLNFARGQTVIVLDADLQDPPELIPDMVEKWRQGYQVVYAQRTQR  125
            LSF+RNFG + A+ AGL+ A G++VI +D DLQDP E+IP+++EKW+ G ++V A+R++R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  126  HKETWFKRFTAYTFYRILKNLADVEIPTDTGDFCLMDRQVVDVLNSMPERNRYIRGLRAW  185
              + ++KR TA  FY++ ++++   I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  186  VGFQQTAIGFERDPRFAGDVKYSFHKSLALAVNGIVSFSKVPLRLSTYIGllsaviaiim  245
            VG Q   + + R  R AG  K++  K   LA++GI SFS  PLR+ TYIGL+ A I+++ 
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  246  allviYWRFFAG---SSTLTGYAALIVAVFFIGAVQLVSIGILGEYIGRIYEEIKGRPLY  302
            +     W ++     ++ + GY++L+V+++F+G+VQL++IG+LGEYIGRIY E K+RP Y
Sbjct  244  GA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  303  TL  304
             L
Sbjct  300  IL  301

404) Lepto7376_2810 in NC_019683


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (725),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 131/305 (43%), Positives = 206/305 (68%), Gaps = 9/305 (2%)

Query  8    SVVIPVFNEEENLHELYKRLAQVFEQLDS-KAEVIFVDDGSKDSSLKILDELNQKDPRIH  66
            S+V+PVFNEEE +  +YK + + F++L +   E++F++DGSKD++  I++ L   DP + 
Sbjct  4    SLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  67   YVSLARNFGHQIAVTAGLNYAQGDAVIIMDSDLQDPPELISELIGQWRQGYHVVYAQRIS  126
             +S++RNFG + A+ AGL+ A GDAVI +D DLQDP E+I++LI +W+ G ++V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  127  RSQENWFKKLMAFGFYRILNRFTDVAIPTDTGDFCLMSREVVNIINSMPERNRYIRGLRA  186
            RS + ++K+  A  FY++ N+++   I  + GDF LMSREVV+ I+ +PERN +++G+ +
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  187  WVGFPQTSVKFHRDPRFAGEVKYTFRKSLSLAIDGIISLSRKPLKMATYLGLTTAVIAMI  246
            WVG     V + R  R AG  K+  +K  +LA++GI S+S  PL++ TY+GL  A I+ +
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  247  MMVLVLFWRLTDA---PNQLIGYTMITIAIFFLGAVQLICLGILGEYVGRIYDEVKQRPI  303
                   W + D+    N + GY  + ++I+FLG+VQLI +G+LGEY+GRIY E K RP 
Sbjct  243  YGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  304  YTVKK  308
            Y +KK
Sbjct  299  YILKK  303

405) G655_25420 in NC_020912


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 204/302 (68%), Gaps = 6/302 (1%)

Query  17   LSVVVPVFNEEAVLPAFHQRLGAVLGDLGDDCEVLYVDDGSTDRSATILAQLQAADRRVG  76
            +S+VVPVFNEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRLINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY+L N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIAYSRAARVAGHSKWRYWRLWNFALEGITGFSTAPLKVagylgllsllaal-  255
            WVG +   + Y RA RVAG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  256  ----atllagIFGQQEIHEHWPVIAALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLI  311
                  + + +FG+  ++   +++ +++++GG+QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  DR  313
             +
Sbjct  302  KK  303

406) PLES_52041 in NC_011770


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 204/302 (68%), Gaps = 6/302 (1%)

Query  17   LSVVVPVFNEEAVLPAFHQRLGAVLGDLGDDCEVLYVDDGSTDRSAAILAQLQAADRRVG  76
            +S+VVPVFNEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRLINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY+L N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIAYSRAARVAGHSKWRYWRLWNFALEGITGFSTAPLKVagylgllsllaal-  255
            WVG +   + Y RA RVAG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  256  ----atllagIFGQQEIHEHWPVIAALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLI  311
                  + + +FG+  ++   +++ +++++GG+QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  DR  313
             +
Sbjct  302  KK  303

407) PAM18_4929 in NC_017548


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 204/302 (68%), Gaps = 6/302 (1%)

Query  17   LSVVVPVFNEEAVLPAFHQRLGAVLGDLGDDCEVLYVDDGSTDRSAAILAQLQAADRRVG  76
            +S+VVPVFNEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRLINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY+L N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIAYSRAARVAGHSKWRYWRLWNFALEGITGFSTAPLKVagylgllsllaal-  255
            WVG +   + Y RA RVAG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  256  ----atllagIFGQQEIHEHWPVIAALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLI  311
                  + + +FG+  ++   +++ +++++GG+QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  DR  313
             +
Sbjct  302  KK  303

408) PA4819 in NC_002516


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 204/302 (68%), Gaps = 6/302 (1%)

Query  17   LSVVVPVFNEEAVLPAFHQRLGAVLGDLGDDCEVLYVDDGSTDRSAAILAQLQAADRRVG  76
            +S+VVPVFNEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRLINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY+L N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIAYSRAARVAGHSKWRYWRLWNFALEGITGFSTAPLKVagylgllsllaal-  255
            WVG +   + Y RA RVAG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  256  ----atllagIFGQQEIHEHWPVIAALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLI  311
                  + + +FG+  ++   +++ +++++GG+QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  DR  313
             +
Sbjct  302  KK  303

409) M062_25440 in NC_021577


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 204/302 (68%), Gaps = 6/302 (1%)

Query  17   LSVVVPVFNEEAVLPAFHQRLGAVLGDLGDDCEVLYVDDGSTDRSATILAQLQAADRRVG  76
            +S+VVPVFNEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRLINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY+L N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIAYSRAARVAGHSKWRYWRLWNFALEGITGFSTAPLKVagylgllsllaal-  255
            WVG +   + Y RA RVAG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  256  ----atllagIFGQQEIHEHWPVIAALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLI  311
                  + + +FG+  ++   +++ +++++GG+QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  DR  313
             +
Sbjct  302  KK  303

410) gtrB in NC_008463


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 129/302 (43%), Positives = 204/302 (68%), Gaps = 6/302 (1%)

Query  17   LSVVVPVFNEEAVLPAFHQRLGAVLGDLGDDCEVLYVDDGSTDRSATILAQLQAADRRVG  76
            +S+VVPVFNEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRLINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY+L N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIAYSRAARVAGHSKWRYWRLWNFALEGITGFSTAPLKVagylgllsllaal-  255
            WVG +   + Y RA RVAG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  256  ----atllagIFGQQEIHEHWPVIAALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLI  311
                  + + +FG+  ++   +++ +++++GG+QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  DR  313
             +
Sbjct  302  KK  303

411) SYNPCC7002_A0766 in NC_010475


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  195 bits (723),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 128/307 (42%), Positives = 211/307 (69%), Gaps = 11/307 (3%)

Query  5    SIIIPVYNEEANLPEMYRRVVQVIEELDG-PAELVLIDDGSQDRSLAILDELHQRDPRVH  63
            S+++PV+NEE  +P  Y+  V+ ++EL     E+V+I+DGS+D + +I++ L   DP V 
Sbjct  4    SLVVPVFNEEEAIPVFYK-TVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   YLSLARNFGHQIAVTAGLQYAQGEAVVIMDADLQDPPELVPQLIEKWRAGYHVVYAQRVS  123
             LS++RNFG + A+ AGL+ A G+AV+ +D DLQDP E++P+LIEKW+AG ++V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  RARESWFKKLMAYGFYRILNRFTDVSIPTDTGDFCLMSRQVVDILNSMPEKHRYIRGLRA  183
            R+ ++++K+  A  FY++ N+++   I  + GDF LMSR+VV+ ++ +PE++ +++G+ +
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  184  WVGFPQTAVQFNRDPRFAGEVKYTFRKSLKLAIDGIISLSRKPLKIATYLGLVTALVAIA  243
            WVG     V++ R  R AG  K+  +K  +LA++GI S+S  PL++ TY+GL  A +++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  244  ----MMILVLFWRIYNAPAQLIGYTLITIAIFFLGAVQLICLGILGEYIGRIYDEVKQRP  299
                M+I  L   ++  P +  GY  + ++I+FLG+VQLI +G+LGEYIGRIY E K RP
Sbjct  243  YGAWMIIDTL---VFGNPVR--GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  LYTVKKA  306
             Y +KK+
Sbjct  298  KYILKKG  304

412) Cagg_3592 in NC_011831


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  194 bits (721),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 130/304 (43%), Positives = 204/304 (68%), Gaps = 8/304 (2%)

Query  9    SVVAPVYNEEQLIAEFCRRVIAVLEPLGEPFELVLVNDGCRDRSPEIMRELHERDPRIKV  68
            S+V PV+NEE+ I+ F + V    E      E+V++NDG +D +  I+  L   DP +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  69   INFSRNFGHQIAITAGTDYATGKAVIVIDSDLQDPPEVIPALIARWREGYQvvygvreer  128
            ++F+RNFG + A+ AG D A+G AVI ID DLQDP EVIP LI +W+ G ++V + R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  129  egeTWFKKTTASIFYRLIVRITNVNIPVDTGDFRLMDRKVVDALKRMREHHRFMRGLSAW  188
              + ++K+ TA  FY+L  +I+  +I  + GDFRLM R VV+ +K + E++ FM+G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  189  VGFRQTGVPYRRHARAAGTTKYPLRKMLRFALDGITSFSYLPLQLATYLGFVVAAISMIF  248
            VG +   V Y R  R AG +K+  +K+  +AL+GITSFS +PL++ TY+G+ VA+IS ++
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  249  --LLVVFVMRLANPAAAEPAFYGQASTLASVLFLGAVQLISLGIIGEYVGRIYDEVKGRP  306
               +++  + ++NP  + P++      L S+LFLG+VQLI++G++GEY+GRIY E K+RP
Sbjct  244  GAWMIIDTLVFGNPVRGYPSL------LVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  307  LYIV  310
             YI+
Sbjct  298  KYIL  301

413) Rvan_0770 in NC_014664


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  194 bits (720),  Expect = 5e-51, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 207/305 (68%), Gaps = 3/305 (0%)

Query  9    ISVVLPAYNESEGLPVVVSSILHALANTGFAHEIVVIDDGSTDGTREVMLDLCAKQPSLR  68
            IS+V+P +NE E++PV   ++ +      +  EIV I+DGS D+T  ++  L   +P + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  69   YVRFSRNFGKEAALSAGLRTAAGDAVILMDSDGQHPPALISVFLDKWREGAEVVAGVQNE  128
             + F+RNFGKE+AL AGL  A+GDAVI +D D Q+P  +I+ +++KW+ GAE+V + +++
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  129  R-LESWTKRRFKAGYYWLMQAGSHVVIPPDAGDFRLIDRKVVDAINALPERNRQMKGLFA  187
            R  +++ KR+    +Y L +  S   I  + GDFRL+ R VV+ I+ LPERN  MKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  188  WVGFRTVLVPFQPEPRVAGVTKFT-WRQLFKLAFTGLTSFSVVPLRLVSLTGLVISSTAF  246
            WVG +T +V +    RVAG++KF  W+ L +LA+ G+TSFS  PLR+ +  GL ++S +F
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWK-LWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  247  LYGCYLLFEHYVVGGRVPGWPTLAVGMMFLSGVQLLALGVIAEYLGRTFEEAKQRPIYIV  306
            LYG  ++++  V G  V G P+L V+++FL+GVQL+++GV++EY+GR + E+K RP YI+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  307  AEDSR  311
              + +
Sbjct  302  KKGRK  306

414) Cha6605_0322 in NC_019697


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  194 bits (720),  Expect = 5e-51, Method: Compositional matrix adjust.
 Identities = 125/307 (41%), Positives = 206/307 (68%), Gaps = 2/307 (0%)

Query  11   KYSLVVPIYNEESTIPALYQRVSAVMDRLDGNSELILVDDGSRDRTLDLLRELHDRDSRV  70
            K SLVVP++NEE +IP +Y+ V    +    + E+++++DGS+D T  ++  L   D+ V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  71   IYLRLARNFGHQIAVTAGLNYVRGEAIIVFDADLQDPPELIPDLLALWQQGYHVVYAQRT  130
            + L ++RNFG + A+ AGL+   G+A+I +D DLQDP E+IP+L+  WQ G ++V A+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  131  KRVREGWFKRLCAYLFYRILQQLANVDIPADTGDFCLMDRQVVDLLNQMPERNRYIRGLR  190
             R  +G++KR  A  FY++ ++++   I  + GDF LM R+VV+ ++ +PERN +++G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  191  SWVGFNQIAFKFERDLRFAGNVKYTFAKSFGLAINGLVSFSTVPLRLSTYLGLFSAVLAI  250
            SWVG +     + R  R AG  K+   K   LA++G+ SFST PLR+ TY+GLF A +++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  251  VMAILVLYWRLFIPHSTLTGFATIAIAIFFLGAVQLISIGILGEYIGRIYEEVKHRPLYT  310
            + +  ++    ++  + + G++++ ++I+FLG+VQLI+IG+LGEYIGRIY E K RP Y 
Sbjct  242  LYGAWMII-DTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  311  IAEVGRK  317
            +   GRK
Sbjct  301  LKK-GRK  306

415) swp_0660 in NC_011566


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  193 bits (716),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 139/302 (47%), Positives = 215/302 (72%), Gaps = 2/302 (0%)

Query  14   MCLSVIVPLFNESQMIAPLLSRLTAVLAELDE-SSEIVFVDDGSSDDSWSQVSQLPLANN  72
            M +S++VP+FNE + I P++ +    + EL     EIVF++DGS D + S ++ L++++ 
Sbjct  1    MKISLVVPVFNEEEAI-PVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  73   EYQCIKLSRNFGKEAAMSAGIEHARGLAVIMLDADLQDPPEQIPLMLEQWRAGYDIVNMK  132
                + ++RNFGKE+A+ AG++HA G AVI +D DLQDP E IP ++E+W+AG ++V  K
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  133  RRKRLGETWFKRFSASCFYRVMNWVSDSPVPENVGDFRLMSRQVVDSIRALPERNRFMKG  192
            R  R  + ++KR +A  FY++ N +S + + ENVGDFRLMSR+VV++I+ LPERN FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  193  LFSWPGFSQTTLEFDRDPRFVGETKWNYGKLFGLAMDGITSFSFKPLRIATWCGVFTAFS  252
            ++SW G     +E+ R  R  G +K N  KL  LA++GITSFS  PLR+ T  G+F A  
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  253  AFAYGGWVVSKTLIYGESVAGYPSLMVVqlglagiqllalgligEYLGRVFVEVKQRPLY  312
            +F YG+W++  TL++G++V GYPSL+V  L L+G+QL+++G++GEY+GR+++E K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  313  LI  314
            ++
Sbjct  300  IL  301

416) HDN1F_25670 in NC_014366


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  193 bits (715),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 135/301 (45%), Positives = 213/301 (71%), Gaps = 10/301 (3%)

Query  1    MPVYNEREVLPLFLQRLKA--TLKTLDQKAEILFVDDGSRDGSADYLIKCAQTDTTLRIV  58
            +PV+NE E +P+F + ++    LK  +   EI+F++DGS+D++   +   A +D  +  +
Sbjct  7    VPVFNEEEAIPVFYKTVREFQELKPYE--VEIVFINDGSKDATESIINALAVSDPLVVPL  64

Query  59   RLSRNFGKEAALSAGLHLAQGNAVIIIDADLQDPPEEIPRMLRAHHDGADVVCMRRSSRP  118
             ++RNFGKE+AL AGL+ A G+AVI ID DLQDP E IP+++   + GA++V  +RS R+
Sbjct  65   SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRS  124

Query  119  GETHFKKLSAHWFYRILNRISRFEIPEDTGDFRLMSRRALDALNQLPERQRYMKGLFAWV  178
             + ++K+ +A+WFY++ N+IS   I E+ GDFRLMSR  ++ ++ LPER+ +MKG+++WV
Sbjct  125  TDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWV  184

Query  179  GFPTTILHYAREVRAAGNTK---WNYPALFGLAFEGITSFSITPLRYATAIGALAAVTGL  235
            G  T +++Y R  R AG +K   W+   L  LA+EGITSFS  PLR  T IG + A  ++
Sbjct  185  GGQTDVVEYVRAERVAGISKFNGWK---LWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  236  FFGLGIVIKTLIWSDPVQGYPSLMAMLTFlggvqllgigllgEYVGKTYFEAKQRPLYLI  295
            ++G  ++I TL+ ++PV+GYPSL+  + FLGGVQL+GIG+LGEY+G+ Y+E+K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  296  R  296
            +
Sbjct  302  K  302

417) Chro_1880 in NC_019695


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  193 bits (717),  Expect = 8e-51, Method: Compositional matrix adjust.
 Identities = 131/304 (44%), Positives = 205/304 (68%), Gaps = 7/304 (2%)

Query  5    KYSLVVPVYNEEKNILELYRRVSAVGEQLDGAIELIFVNDGSRDRTLQIVRDLHQNDPRV  64
            K SLVVPV+NEE  I  +Y+ V    E     +E++F+NDGS+D T  I+  L  +DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  65   SYLSLARNFGHQIAVTAGLNFARGEVAIVMDADLQDPPELIVEMVSKWQNGFQVVYAQRT  124
              LS++RNFG + A+ AGL+ A G+  I +D DLQDP E+I +++ KWQ G ++V A+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  125  QRQKESWFKRGTAYIFYRLLQHLADVDIPTDTGDFCLIDRQVLDILNAMPERNRYMRGLR  184
            +R  ++++KR TA  FY+L + ++   I  + GDF L+ R+V++ ++ +PERN +M+G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  185  AWIGFRQTSVQFDRPPRFAGKVNYTFGKSLALALNGLVSFSKVPLRLSTYVGlfaaaiav  244
            +W+G +   V++ R+ R AG  ++   K   LAL+G+ SFS  PLR+ TY+GLF A+I+ 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  245  lmallvlYWRL---FVPQSPLTGFTMILVAIFFLGAVQLVSIGILGEYVGRIYEEVKGRP  301
            L +     W +   +V  +P+ G+  +LV+I+FLG+VQL++IG+LGEY+GRIY E K+RP
Sbjct  242  LYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  IYTL  305
             Y L
Sbjct  298  KYIL  301

418) PCNPT3_12175 in NC_020802


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  193 bits (717),  Expect = 8e-51, Method: Compositional matrix adjust.
 Identities = 131/308 (43%), Positives = 208/308 (68%), Gaps = 7/308 (2%)

Query  3    RVSIVIPCFNESEVID---TTVAELISVTQGIKNYEFELIFVNDGSSDDTEKKLLAHSKR  59
            ++S+V+P FNE E I     TV E+    Q +K YE E++F+NDGS D TE  + A +  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAVS  57

Query  60   YNNVRTISFSRNFGHQQAVSAGLDVSTGDAVVLIDADLQDPPKVIAEMIIKWEEGFDVVY  119
               V  +SF+RNFG + A+ AGLD ++GDAV+ ID DLQDP  VI+++I KW+ G ++V 
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVL  117

Query  120  GTRASREGESWFKLLTAKSFYRILNYLSEVKIPLDTGDFRLMDRQVVDHLIAMPEKSRFI  179
            + R+ R  ++++K  TA  FY++ N +S  KI  + GDFRLM R+VV+++  +PE++ F+
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  RGMVSWIGFNQTAISYKRSARFAGESKYPLAKMLKFGIDGILSFSVKPLKLSIMMGFACS  239
            +G++SW+G +   + Y R+ R AG SK+   K+ +++++GI SFS  PL++   +G+  +
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  240  GVAMLMLLYSVYIRLMTDHWETGWTSILVSILFMGGVQLISIGILGEYVARIYNESKQRP  299
            +++ L     +   L+ ++   G  S+LVSILF+GGVQLI+IG+LGEY++RIY E+K RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  LYIIKQQR  307
             YI+K+ R
Sbjct  298  KYILKKGR  305

419) Ssed_0713 in NC_009831


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 134/301 (45%), Positives = 216/301 (72%), Gaps = 2/301 (0%)

Query  16   LSILIPMYNEAEMLQPLFSRLSQVLSSIPESSEIVFIDDGSSDKTWDLLQQLPVSSSEHQ  75
            +S+++P++NE E +  ++  + +     P   EIVFI+DGS D T  +++ L+VS +   
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  76   CIRLSRNFGKEAAMTAGLEQARGLAVILLDADLQDPPELIPQMLQAWREGFDVVNMKRRK  135
             + ++RNFGKE+A+ AGL++A G AVI +D DLQDP E+IP++++ W+ G ++V  KR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  136  RLGESWFKRLSAAAFYRVINSMAESPVPENVGDFRLISRQVVDSINELPERNRFMKGILS  195
            R  ++++KR +A  FY++ N ++ + + ENVGDFRL+SR+VV++I+ LPERN FMKGILS
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  196  WPGFSQTEIL-FDRDPRHLGETKWNYSKLIGLAMDGITSFSIKPLRLATWAGLLTALSAF  254
            W G +QT+++ + R  R  G +K N  KL  LA++GITSFS  PLR+ T  GL+ A  +F
Sbjct  183  WVG-GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  255  TYGGWVFLKTVLWGGEVAGYPSLMivqvalagvqllalgligEYLGRVFMEVKQRPIYLI  314
             YG+W+++ T++ G  V GYPSL++  + L+GVQL+++G++GEY+GR+++E K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  315  R  315
            +
Sbjct  302  K  302

420) Anacy_2498 in NC_019771


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (711),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 127/304 (42%), Positives = 201/304 (67%), Gaps = 9/304 (2%)

Query  7    SLIIPIYNEEENITEMYNRLINVMAQLDG-EAELILIDDGSCDRSLSMIRELHHHNSRVR  65
            SL++P++NEEE I   Y + +    +L   E E+++I+DGS D + S+I  L   ++ V 
Sbjct  4    SLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  66   YLSLARNFGHQIAVTAGLNFVQGKSIIVMDADLQDPPELIITMIDKWHQGYQVVYAQRIS  125
             LS++RNFG + A+ AGL+   G ++I +D DLQDP E+I  +I+KW+ G ++V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  126  RQKESWLKRLMAYLFYRLLKRLAKVDIPVDTGDFCLMDRQVVDILNAMPERHRYIRGLRA  185
            R  +++LKR  A  FY+L ++++   I  + GDF LM R+VV+ ++ +PER+ +++G+ +
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  186  WVGFRQTSVLFERSPRYAGDVKYTFGKSLSLAVDGIISFSIVPLRLATYLGLLSAAIALI  245
            WVG +   V + R+ R AG  K+   K  +LA++GI SFS  PLR+ TY+GL+ A+I+  
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS--  240

Query  246  MIFLVLYWRIFAPV---SPLIGYTLITIAMFFLGSVQLICIGILGEYIGRIYEEVKGRPL  302
              FL   W I+  +   +P+ GY  + ++++FLG+VQLI IG+LGEYIGRIY E K+RP 
Sbjct  241  --FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  303  YTLK  306
            Y LK
Sbjct  299  YILK  302

421) BN112_4147 in NC_019382


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 121/300 (41%), Positives = 199/300 (67%), Gaps = 1/300 (0%)

Query  37   VQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGI  96
            +++S VVP +NE   + V+  ++R   E      EI+ ++DGS D T  ++   +  + +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  97   RY-VQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVR  155
               + ++RNFGKE+AL AGL+ A GDAVI +D D+Q+P E+I +++  W+ GA+MV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  156  RQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGL  215
             +R  + ++KR  A  FY+L +      +  + GDFRLM R VVE +  LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  216  YAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLS  275
             +WVG +++ V Y    R  G S F++WKL  LA +G+T+F+T PLR+ + IG++ A +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  276  LSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFI  335
            + YG+ ++ D L+ GN+V G  +++ ++LF++G++LI++GV+GEY++RI+ E K+RP +I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

422) BB4269 in NC_002927


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (713),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 122/300 (41%), Positives = 199/300 (67%), Gaps = 1/300 (0%)

Query  37   VQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGI  96
            +++S VVP +NE   + V+  ++R   E      EI+ ++DGS D T  ++   +  + +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  97   RY-VQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGAEMVYAVR  155
               + ++RNFGKE+AL AGL+ A GDAVI +D D+Q+P E+I +++  W+ GAEMV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  156  RQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGL  215
             +R  + ++KR  A  FY+L +      +  + GDFRLM R VVE +  LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  216  YAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLS  275
             +WVG +++ V Y    R  G S F++WKL  LA +G+T+F+T PLR+ + IG++ A +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  276  LSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFI  335
            + YG+ ++ D L+ GN+V G  +++ ++LF++G++LI++GV+GEY++RI+ E K+RP +I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

423) BPP3825 in NC_002928


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 121/300 (41%), Positives = 199/300 (67%), Gaps = 1/300 (0%)

Query  37   VQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGI  96
            +++S VVP +NE   + V+  ++R   E      EI+ ++DGS D T  ++   +  + +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  97   RY-VQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVR  155
               + ++RNFGKE+AL AGL+ A GDAVI +D D+Q+P E+I +++  W+ GA+MV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  156  RQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGL  215
             +R  + ++KR  A  FY+L +      +  + GDFRLM R VVE +  LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  216  YAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLS  275
             +WVG +++ V Y    R  G S F++WKL  LA +G+T+F+T PLR+ + IG++ A +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  276  LSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFI  335
            + YG+ ++ D L+ GN+V G  +++ ++LF++G++LI++GV+GEY++RI+ E K+RP +I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

424) BN118_3415 in NC_018518


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 121/300 (41%), Positives = 199/300 (67%), Gaps = 1/300 (0%)

Query  37   VQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGI  96
            +++S VVP +NE   + V+  ++R   E      EI+ ++DGS D T  ++   +  + +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  97   RY-VQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVR  155
               + ++RNFGKE+AL AGL+ A GDAVI +D D+Q+P E+I +++  W+ GA+MV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  156  RQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGL  215
             +R  + ++KR  A  FY+L +      +  + GDFRLM R VVE +  LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  216  YAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLS  275
             +WVG +++ V Y    R  G S F++WKL  LA +G+T+F+T PLR+ + IG++ A +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  276  LSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFI  335
            + YG+ ++ D L+ GN+V G  +++ ++LF++G++LI++GV+GEY++RI+ E K+RP +I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

425) BPTD_0414 in NC_017223


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 121/300 (41%), Positives = 199/300 (67%), Gaps = 1/300 (0%)

Query  37   VQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGI  96
            +++S VVP +NE   + V+  ++R   E      EI+ ++DGS D T  ++   +  + +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  97   RY-VQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVR  155
               + ++RNFGKE+AL AGL+ A GDAVI +D D+Q+P E+I +++  W+ GA+MV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  156  RQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGL  215
             +R  + ++KR  A  FY+L +      +  + GDFRLM R VVE +  LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  216  YAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLS  275
             +WVG +++ V Y    R  G S F++WKL  LA +G+T+F+T PLR+ + IG++ A +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  276  LSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFI  335
            + YG+ ++ D L+ GN+V G  +++ ++LF++G++LI++GV+GEY++RI+ E K+RP +I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

426) BP0399 in NC_002929


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 121/300 (41%), Positives = 199/300 (67%), Gaps = 1/300 (0%)

Query  37   VQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGI  96
            +++S VVP +NE   + V+  ++R   E      EI+ ++DGS D T  ++   +  + +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  97   RY-VQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVR  155
               + ++RNFGKE+AL AGL+ A GDAVI +D D+Q+P E+I +++  W+ GA+MV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  156  RQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGL  215
             +R  + ++KR  A  FY+L +      +  + GDFRLM R VVE +  LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  216  YAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLS  275
             +WVG +++ V Y    R  G S F++WKL  LA +G+T+F+T PLR+ + IG++ A +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  276  LSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFI  335
            + YG+ ++ D L+ GN+V G  +++ ++LF++G++LI++GV+GEY++RI+ E K+RP +I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

427) Clole_2043 in NC_015275


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 122/300 (41%), Positives = 203/300 (68%), Gaps = 0/300 (0%)

Query  7    LTVIIPAYFEEAVIEACYDALKIVMDENKWKYEFIFVNDGSKDQTLPLLKQIAEKDRCVK  66
            +++++P + EE  I   Y +++   + +    E++F+NDGSKD T ++++ +A  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  67   VIDFARNFGHQVAVTAGIYHSSGDATVVIDADLQDPPEVIVQMVEKWQEGYDVVYAKRKK  126
             + F+RNFG + A+ AG+ H+SGDA + ID DLQDP EVI +++EKWQ G ++V AKR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  127  RKGESWFKLVTAKCFYRFLHMMAEIEIPMDTGDFRLIDRCVVEAFKQMPERNRFVRGMIS  186
            R  ++++K  TA  FY++ + ++   I  + GDFRL+ R VVE +K +PERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  187  WVGFDQTYIEYERDERLAGETKYPLKKMIRFATDGIIAFSTKPLKLVQSLGFMTIVLAIL  246
            WVG +   +EY R ER+AG +K+   K+  +A +GI +FST PL++   +G+    +++L
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  247  ILGYSLVSKYILQTVVSGWTSLMVTITFFSGVQLFSIGLLGEYIARIYDESKNRPLYLIK  306
              +  ++   ++   V G  SL+V+I F++GVQL++IG+LGEYI+RIY E+K+RP Y++K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

428) DvMF_1923 in NC_011769


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  192 bits (712),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 141/293 (49%), Positives = 217/293 (75%), Gaps = 0/293 (0%)

Query  14   NEEDAVPLFLSTVRPIVDREPYDFEFVFVNDGSSDRTVDVLLAEHARDPRVKLVDLSRNF  73
            NEE+A+P+F  TVR + +  PY+ E+VF+NDGS D T  ++ A    DP V  + ++RNF
Sbjct  11   NEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNF  70

Query  74   gkelalaaglqaargdaVVPMDVDLQDPPEVLPDFLRAWEQgaevvvgvrrarSSDTVGK  133
            GKE AL AGL+ A GDAV+P+DVDLQDP EV+P+++  W+ GAE+V++ R  RS+D   K
Sbjct  71   GKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLK  130

Query  134  RVSARLFYRLYNRVSGNPIVPDAGDYRLLSRPAVDALNALPERVRFTKGLYTWVGFRQVA  193
            R +A  FY+L N++S   I  + GD+RL+SR  V+ ++ LPER  F KG+ +WVG +   
Sbjct  131  RKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDV  190

Query  194  VHFDRAPRSAGTGKWKPWKLWNFAIDGLTGFSTLPLRVWSYLGMLVALAGFVYAAIIAGR  253
            V++ RA R AG +K + WKLWN+A++G+T+FST+PLRVW+Y+G++VA  +F+Y+A +   
Sbjct  191  VEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIID  250

Query  254  TLLFGAQVPGYASFmvtlltlgglvmvslgIIGEYLGRVYEEVKRRPQYVVRR  306
            TL+FG  V GY+S++V++L LGG+ ++++G++GEY+GR+Y E K RP+Y++++
Sbjct  251  TLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

429) Glo7428_0278 in NC_019745


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  191 bits (710),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 210/305 (69%), Gaps = 9/305 (2%)

Query  3    KYSIVVPIFNEEKTIPALYQRLYKVMERLDG-DVELILVNDGSRDRSLQLLRELHDKDSR  61
            K S+VVP+FNEE +IP +Y+ + +  + L   +VE++++NDGS+D +  ++  L   D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VCYLSLARNFGHQIAVTAGLNFVRGQVAIVLDGDLQDPPELIPDMIEKWRQGYQVVYAQR  121
            V  LS++RNFG + A+ AGL+   G+  I +D DLQDP E+IP++IEKW+ G ++V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  122  TQRRQEGWFKRFTAYFFYRLLKRLADVDIPTDTGDFCLMDRQVVDVLNAMPERNRYIRGL  181
            ++R  +G++KR TA  FY+L ++++   I  + GDF LM R+VV+ ++ +PERN +++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  RSWVGFHQTAIRFERDPRFAGEVKYTFTKSLALAVNGLVSFSKVPLRLSTYVGllaaiva  241
             SWVG +   + + R  R AG  K+   K   LA++G+ SFS  PLR+ TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  ilmallvlYWRI---FVPSSRLEGFAIILVAIFFIGAVQLVSIGILGEYVGRIYEEVKGR  298
            +L +     W I   +V ++ + G++ +LV+I+F+G+VQL++IG+LGEY+GRIY E K+R
Sbjct  241  FLYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PLYTL  303
            P Y L
Sbjct  297  PKYIL  301

430) Npun_R5879 in NC_010628


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  191 bits (710),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 127/304 (42%), Positives = 205/304 (68%), Gaps = 7/304 (2%)

Query  4    KYSLIVPIYNEEEIIPELYRRLSAVMNRLDGLVELILINDGSRDRSLQLLRELHQKDPRI  63
            K SL+VP++NEEE IP +Y+ +    +     VE+++INDGS+D +  ++  L   DP +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   CYLSFARNFGHQIAVTAGLNFVRGQVIIILDADLQDPPELIPDMIEKWRQGYQVVYAQRT  123
              LSF+RNFG + A+ AGL+   G+ +I +D DLQDP E+IP++IEKW+ G ++V A+R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  QRLKEGWFKRFTAYSFYRLLKKLADVDIPTDTGDFCLMDRQIVDILNSMPERTRYIRGLR  183
            +R  +G++KR TA  FY+L +K++   I  + GDF LM R++V+ ++ +PER  +++G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  SWVGFQQTAIRFERDPRFAGEVKYTFSKSLALAINGLVSFSIVPLRLSTYlgliaaaaai  243
            SWVG Q   + + R  R AG  K+   K   LA++G+ SFS  PLR+ TY+GL+ A+ ++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  fmallilYWRLFLP---HSPLTGFTIILMAIFFLGSVQLVSVGILGEYIGRIYEEVKARP  300
            + +     W ++      +P+ G+  +L++I+FLG+VQL+++G+LGEYIGRIY E K+RP
Sbjct  242  LYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  LYTL  304
             Y L
Sbjct  298  KYIL  301

431) PSPA7_5538 in NC_009656


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  191 bits (709),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 127/302 (43%), Positives = 204/302 (68%), Gaps = 6/302 (1%)

Query  17   LSVVVPVYNEEAVLPAFHQRLSAALASLGDDYEVLYVDDGSSDRSAAILAQLQGADRRVG  76
            +S+VVPV+NEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRVINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY++ N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIVYSRAARAAGHSKWRYWRLWNFALEGITGFSTAPLKVagylgllsllaal-  255
            WVG +   + Y RA R AG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    ++ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  256  ----atllagIFGQPEIHEHWPVIAALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLI  311
                  + + +FG+P ++   +++ +++++GG+QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  312  DR  313
             +
Sbjct  302  KK  303

432) Tery_0804 in NC_008312


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  191 bits (709),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 125/306 (41%), Positives = 204/306 (67%), Gaps = 7/306 (2%)

Query  1    MKYSLVIPIYNEEKNLPELYRRLSAVMERIDGDVELILINDGSRDRSLEIIREFHRKDPR  60
            MK SLV+P++NEE  +P +Y+ +    E    +VE+++INDGS+D +  II  +   DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   ICYLSFARNFGHQIAVTAGLNFARGEVIVVLDGDLQDPPELIPDLIEKWRQGYQVVYAQR  120
            +  LSF+RNFG + A+ AGL+ A G+ ++ +D DLQDP E+IP+LIEKW+ G ++V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  TKRHQESWFKRLPAFIYYRVLKRLADVEIPIDTGDFCLMDRCVVDLLNKMPETNRYIRGL  180
            + R  ++++KR  A  +Y++ ++++   I  + GDF LM R VV+ ++ +PE N +++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  RAWVGFRQTAIKFEREPRFAGNIQYTFAKSLTLAINGLVSFSKVPLRLSTYVGLFaacva  240
             +WVG +   + + R  R AG  ++   K   LA++G+ SFS  PLR+ TY+GLF A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  llmaclvlYWRIFYP---NSPLTGLAIIMMAIFFLGAVQLVSIGILGEYIGRIYEEVKGR  297
            +L +     W I+      +P+ G + ++++I+FLG+VQL++IG+LGEYIGRIY E K+R
Sbjct  241  FLYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  298  PLYTLS  303
            P Y L 
Sbjct  297  PKYILK  302

433) BPUM_3158 in NC_009848


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  191 bits (708),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 125/302 (42%), Positives = 207/302 (69%), Gaps = 2/302 (0%)

Query  8    SIVVPVYNEELVIHESYQRLKTVMDSTGEAYELLFVNDGSMDRTAELIKGYCQTDSNVRL  67
            S+VVPV+NEE  I   Y+ ++   +      E++F+NDGS D T  +I++   +D+ V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IDFSRNFGHQIAITAGMDYAKGEAVVVIDADLQDPPELILDMIEKWKEGYEVVYAVRSKR  127
            + F+RNFG + A+ AG+D A G+AV+ ID DLQDP E+I ++IEKW+ G E+V A RS R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETVFKKYTASLFYRVLRQITEVDIPIDTGDFRLMDRKVCHEMRKIREKNPFVRGLVSW  187
              +  +K+ TA  FY++  +I+   I  + GDFRLM R V ++++ + E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFKQVAVEYVRDERLAGETKYPLKKMLKLSMDGITSFSYKPLKLASVTGIALSAIGFI-  246
            VG +   VEYVR ER+AG +K+   K+ +L+++GITSFS  PL++ +  G+ +++I+F+ 
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  247  SMFLVLYLKLFTNSTITGWSSLIVIQLFFSGIILFMLGMIGEYIGRIYDEAKDRPLYIVR  306
            +  +++   +F N+ + G +SL+V  LF++G+ L+ +G++GEYIGRIY E+K RP YI++
Sbjct  244  GAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  307  DS  308
             +
Sbjct  303  KG  304

434) BN117_3877 in NC_018828


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  191 bits (708),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 121/300 (41%), Positives = 199/300 (67%), Gaps = 1/300 (0%)

Query  37   VQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGI  96
            +++S VVP +NE   + V+  ++R   E      EI+ ++DGS D T  ++   +  + +
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  97   RY-VQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVR  155
               + ++RNFGKE+AL AGL+ A GDAVI +D D+Q+P E+I +++  W+ GA+MV A R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  156  RQRDDEPWFKRVGARAFYRLLSTARGVEVPLHAGDFRLMDRRVVEALVALPERTRFMKGL  215
             +R  + ++KR  A  FY+L +      +  + GDFRLM R VVE +  LPER  FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  216  YAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLS  275
             +WVG +++ V Y    R  G S F++WKL  LA +G+T+F+T PLR+ + IG++ A +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  276  LSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFI  335
            + YG+ ++ D L+ GN+V G  +++ ++LF++G++LI++GV+GEY++RI+ E K+RP +I
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

435) CL3_03630 in NC_021024


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  190 bits (704),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 129/303 (43%), Positives = 199/303 (66%), Gaps = 2/303 (0%)

Query  2    KRISIIIPCYNEQEAIPLFMEEAGRVCGGLTEYEFEWIFVDDGSKDGTLSLLKEYAKRDR  61
             +IS+++P +NE+EAIP+F   + R    L  YE E +F++DGSKD+T S+++  A  D 
Sbjct  1    MKISLVVPVFNEEEAIPVFYK-TVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  62   RVKYLSFSRNFGKEAAIYAGLEHARGDYTAIMDADLQDPPRLLPEMIEALESGEYDSAAA  121
             V  LSF+RNFGKE+A++AGL+HA GD    +D DLQDP  ++P++IE  ++G  +   A
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  122  RRVDRRGEPPIRSFFARMFYRLIRHISDIDIVDGARDYRLMNRKMKDAIVSMTEYNRFSK  181
            +R DR  +  ++   A  FY+L   IS   I +   D+RLM+R + + I  + E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GIFGWVGFRTKWIPFENVERVAGETKWSFWKLLIYSIEGIVAFTTVPLTIAAYLGLIFCV  241
            GI++WVG +T  + +   ERVAG +K + WKL   ++EGI +F+T PL + +Y+GL+   
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  VAFFMVLVVIGKTLMFGDPVGGWPSLACIILFVGGIQLLCAGIVGKYLAKIYLEVKRRPI  301
            ++F+    +I  TL+FG+PV G PSL   ILF+GG+QL+  G++G Y+++IYLE K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YLV  304
            Y++
Sbjct  299  YIL  301

436) CLS_00400 in NC_021047


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  190 bits (705),  Expect = 8e-50, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 199/303 (66%), Gaps = 2/303 (0%)

Query  2    KRISIIIPCYNEQEAIPLFIEEAGRVCGGLTEYEFEWIFVDDGSKDGTLSLLKEYAKRDR  61
             +IS+++P +NE+EAIP+F   + R    L  YE E +F++DGSKD+T S+++  A  D 
Sbjct  1    MKISLVVPVFNEEEAIPVFYK-TVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  62   RVKYLSFSRNFGKEAAIYAGLEHARGDYTAIMDADLQDPPRLLPEMIEALESGEYDSAAT  121
             V  LSF+RNFGKE+A++AGL+HA GD    +D DLQDP  ++P++IE  ++G  +   +
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  122  RRVDRRGEPPIRSFFARMFYRLIRHISDIDIVDGARDYRLMNRKMKDAIVSMTEYNRFSK  181
            +R DR  +  ++   A  FY+L   IS   I +   D+RLM+R + + I  + E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GIFGWVGFRTKWIPFENVERVAGETKWSFWKLLIYSIEGIVAFTTVPLTIAAYLGLIFCV  241
            GI++WVG +T  + +   ERVAG +K + WKL   ++EGI +F+T PL + +Y+GL+   
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  VAFFMVLVVIGKTLMFGDPVGGWPSLACIILFVGGIQLLCAGIVGKYLAKIYLEVKRRPI  301
            ++F+    +I  TL+FG+PV G PSL   ILF+GG+QL+  G++G Y+++IYLE K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YLV  304
            Y++
Sbjct  299  YIL  301

437) LDBND_0051 in NC_014727


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  190 bits (704),  Expect = 8e-50, Method: Compositional matrix adjust.
 Identities = 129/300 (43%), Positives = 210/300 (70%), Gaps = 1/300 (0%)

Query  3    KISIIVPCYNEEAALPLFYPVASEVLEKLPDDYELIFVNDGSKDRTLEILHDLAEKDPHV  62
            KIS++VP +NEE A+P+FY    E  E  P + E++F+NDGSKD T  I++ LA  DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   FYISFSRNFGKEAAMYAGFVNASGDYVAVMDADLQDPPALLPEMIKILDSGEYDSVATRR  122
              +SF+RNFGKE+A++AG+ +ASGD V  +D DLQDP  ++P++I   ++G  + V ++R
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKR  120

Query  123  EDRKGEPPVRSWFARKFYQIINKISDADVVDGARDFRLMKRDMVDAIVEMSEYNRFSKGI  182
             DR  +  ++   A  FY++ NKIS + + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  183  FGWVGFKTYWLPYENVERVAGESKWNFWKLFKYAIDGIINFSLVPLKLSSWLGFIMTGVA  242
            ++WVG +T  + Y   ERVAG SK N WKL + A++GI +FS  PL++ + +G+++++++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  243  FIMlvviilrrliHGDPVAGWASLISVIIFIGGLIMLSLGVIGQYLAKIYMESKHRPHYI  302
            F+    +I+  L+ G+PV G +SL+  I+F+GG+ ++++GV+G+Y+++IY+E+K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

438) Syncc9902_0192 in NC_007513


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  190 bits (704),  Expect = 9e-50, Method: Compositional matrix adjust.
 Identities = 139/303 (46%), Positives = 205/303 (68%), Gaps = 9/303 (2%)

Query  8    VVAACFNEETVIPRFIERVIALPEVDR----LLLIDDGSSDATVTVIRQWQAQHPNAGVV  63
            +V + FNEE  IP F   V  + E+      +++I+DGS DAT ++I      +P   VV
Sbjct  5    LVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL--VV  62

Query  64   LLELTRNFGKEAAMLAGLDHVDGECSAALLIDSDLQHPPERIPAMVAAWRDGAEVVTAVR  123
             L +TRNFGKE+A++AGLDH  G+   +  ID DLQ+P E IP ++  W+ GAE+V A R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIP--IDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  DDRDEESRLKVATASWFYRVFNRLVDSIQLQEGAGDFRLLSAPVVAAITQMREATRFSKG  183
             DR  ++RLK  TA WFY++ N+ + + +++E  GDFRL+S  VV  I  + E   F KG
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  184  LMPWTGYRSVEIPYSRVARAGGQTSWNSIKLWRYALDGIFSFSVRPLKVWGVIGVLISFL  243
            +++W G ++  + Y R  R +G +  N+ KLW  AL+GI SFS  PL+VW  IG++++ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  244  SFIYAALIVLRTLVLGADLPGYASLIVAilflggiqligigvlgEYIGRIYVDVKRRPHY  303
            SF+Y+A +++ TLV+G  + GY+SL+V+ILFLGG+QLIGIGVLGEYIGRIY++ K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  304  FVR  306
            +++
Sbjct  300  ILK  302

439) VEJY3_08120 in NC_016613


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  189 bits (702),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 141/308 (46%), Positives = 202/308 (66%), Gaps = 13/308 (4%)

Query  5    VSVVVPCFNESEVID---HTVNELLDVTNLISGTHFEIIFVNDGSSDDTESKLLKHSTHH  61
            +S+VVP FNE E I     TV E+ ++       + EI+F+NDGS D TES +   +  +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPY----EVEIVFINDGSKDATESIINALAVSD  58

Query  62   DNIYIISLSRNFGHQQAVSAGLDASRGDAVVVIDADLQDPPRVIKDMIVKWQAGYSVVYG  121
              +  +S++RNFG + A+ AGLD + GDAV+ ID DLQDP  VI ++I KWQAG  +V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  IRARREGESAFKLASAKIFYRLLNRLSEVPIPLDTGDFRLMDREVVDQLIAMPERARFIR  181
             R+ R  ++ +K  +A  FY+L N++S   I  + GDFRLM REVV+++  +PER  F++
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GMVSWVGFNQTSVTYERSPRFAGESKYPLTKMLNLAMDGILSFSVKPLKLAIIMGFACAG  241
            G++SWVG +   V Y R+ R AG SK+   K+ NLA++GI SFS  PL++   +G+  A+
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  IAFFMVLYSIYIRLAT---EQWVSGWTSLHVSILFMGGVQLISIGILGEYIARIYNESKR  298
            I+F   LY+  + + T    + V G  SL VSILF+GGVQLI+IG+LGEYI+RIY E+K 
Sbjct  239  ISF---LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  299  RPLYITKK  306
            RP YI KK
Sbjct  296  RPKYILKK  303

440) RoseRS_4447 in NC_009523


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  189 bits (703),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 127/308 (42%), Positives = 198/308 (65%), Gaps = 13/308 (4%)

Query  58   HLSVVLPVFNERENLPALYERLVRVLDAGNHSYELVFVDDGSRDGSRDVLYALAERDPRV  117
             +S+V+PVFNE E +P +Y  +    +      E+VF++DGS+D++  ++ ALA  DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  118  VVVELARNFGHQIAISAGLDYARGDGVIVMDSDLQDPPEVLPEFIARWREGYDVVYAVRA  177
            V + ++RNFG + A+ AGLD A GD+VI +D DLQDP EV+P++I +W+ G ++V A R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  178  SRKENlllraayalfyrllrW-------IANIDIPLDAGDFCLMDRRVVDVLTAMPERNR  230
             R  +  L+   A       W       I+   I  + GDF LM R VV+ +  +PERN 
Sbjct  122  DRSTDGRLKRKTAE------WFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  231  FVRGIRSWVGMKQIGLPYDRQGRYAGKPKYTLSRLTYLAIDGIVAFSFVPLRIITILGFI  290
            F++GI SWVG +   + Y R  R AG +K+   +L  LA++GI +FS  PLR+ T +G++
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLF  235

Query  291  VSAVSIALAILYTVQRLAFGLTPPGFPTLIVAIFFLAGIQLITIGVIGEYVGRIYEEVKQ  350
            V+++S+  +    ++ L FG    G+P+L+V+I+FL+G+QLI IGV+GEY+GRIY E K 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  351  RPLYVVRR  358
            RP Y++++
Sbjct  296  RPKYILKK  303

441) Nos7107_0189 in NC_019676


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  189 bits (700),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 133/305 (44%), Positives = 203/305 (67%), Gaps = 7/305 (2%)

Query  7    SLVIPIYNEEENITEMYRRLHHVAEQLDGEVELILVDDGSRDRSLSMIRELRHLDSRVRY  66
            SLV+P++NEEE I   Y+ +++  E    EVE+++++DGS+D + S+I  L   D+ V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  67   LSFARNFGHQIAVTAGLNFVQGKCAIIMDADLQDPPELIFQMLEKWQQGYEVVYAQRLSR  126
            LSF+RNFG + A+ AGL+   G   I +D DLQDP E+I +++EKWQ G E+V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  127  KQESSLKRFTAYAFYRILRRLSHVDIPTDTGDFCLLDRQVVDILNAMPERNRYIRGLRAW  186
              ++ LKR TA  FY++  ++S   I  + GDF L+ R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  187  VGFRQTAVLFEREPRFAGKVKYTFGKSWALAIDGIISFSTVPLKLATYigmvaaaiallm  246
            VG +   V + R  R AG  K+   K W LA++GI SFST PL++ TYIG+  A+I++L 
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  247  iilvlYWRLFDH---ASPLIGYSLITIAIFFLGSVQLICIGILGEYIGRIYEEVKARPIY  303
                  W ++D    ++P+ GY+ + ++I+FLG+VQLI IG+LGEYIGRIY E K+RP Y
Sbjct  244  GA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  304  TVKET  308
             +K  
Sbjct  300  ILKKG  304

442) LCK_01138 in NC_010471


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  189 bits (701),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 129/306 (43%), Positives = 208/306 (68%), Gaps = 7/306 (2%)

Query  12   SIVVPVHNEEETIQIFYDAVQSLKQSLPVTLHYHFVDDGSTDQTLAILRTLSNQDSNVHF  71
            S+VVPV NEEE+I +FY +V+ +++  P  ++  F++DGS D T +I+ +L+  D+ V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  72   LSFSRNFGKEAALYAGLQQADGDFVAVMDVDLQDPPELLPDMLSPVMAGEYDAVGTRRAD  131
            LSF+RNFGKE+AL+AGL++A GD V  +DVDLQDP E++P+++    AG  + V ++R+D
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRSD  122

Query  132  RKGEARLRSWFSEQFYVWMNKISQTQLVDGARDYRVMTRQMVDAVLDLSENQRFSKGIFS  191
            R  ++RL+   +E FY   NKIS  ++ +   D+R+M+R++V+ +  L+E + F KGI+S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  192  WVGFKTKYLPFENRERVEGET---SWSFWALTKYAIEGIVSFSTVPLTFITVVGFTSFCL  248
            WVG +T  + +   ERV G +   +W +W L   A+EGI SFST PL   T +G+    +
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVASI  239

Query  249  SILSAIFIVCRALIDNHSVAGWPSMVTIILFIGGIQLLSLGVIGRYIAAIFLETKRRPIY  308
            S+L +  ++  +L+  ++V G PS++  ILF+GG+QL+++GV+G YI+ I+LETK RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  309  VKKEEK  314
            + K  +
Sbjct  300  ILKKGR  305

443) C269_03685 in NC_018631


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  189 bits (700),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 130/307 (43%), Positives = 214/307 (70%), Gaps = 7/307 (2%)

Query  26   LSLVVPVHNEEETIQTFYDTLSALKDKVTATIEYHFVDDGSTDHTLSILRELANHDENVH  85
            +SLVVPV NEEE+I  FY T+  +++     +E  F++DGS D T SI+  LA  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  86   YISFSRNFGKEAGLYAGLQQTTGQYVAVMDVDLQDPPELLPQMLQDVQSGDYDAVGTRRA  145
             +SF+RNFGKE++L+AGL++++G+ V  +DVDLQDP E++P++++  Q+G  + V ++R+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRS  121

Query  146  DRSGEARIRSWFSAQFYVWMNKISETQLVDGARDYRVMTRQMVNAILSMSENQRFSKGIF  205
            DRS ++R++   +  FY   NKIS  ++ +   D+R+M+R++V+ I  ++E + F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  206  SWVGFKTKYIPFENRERVAGST---SWSFWSLSKYAIAGIVSFSTFPLTIITglgflsfg  262
            SWVG +T  + +   ERVAG +   +W +W+L   A+ GI SFSTFPL + T +G++  +
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVAS  238

Query  263  isllsaafIVIRALAYNNSVAGWPSMVTIILFIGGIQLLSLGVIGRYVAAIFLESKHRPI  322
            IS+L +A ++I +L + N+V G PS++  ILF+GG+QL+++GV+G Y++ I+LE+K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  323  YITREEK  329
            YI +  +
Sbjct  299  YILKKGR  305

444) SII_0977 in NC_022237


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (698),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 139/309 (45%), Positives = 209/309 (68%), Gaps = 4/309 (1%)

Query  1    MTISIIIPCFNEEESLPLFYAEMekikqqikeeFEYIFVNDGSKDRTLQVLRDLNQTDRN  60
            M IS+++P FNEEE++P+FY  +  +++    E E +F+NDGSKD T  ++  L  +D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VHYLSFSRNFGKEAALYAGLQHATGDYVTVMDADLQDPPALLIQMKNMLDENAELDCVGT  120
            V  LSF+RNFGKE+AL+AGL+HA+GD V  +D DLQDP  ++ ++ +  +  AE+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRTTREGEPLIRSFFAKMFYKLINKISQVEMVDGVRDFRLMRRQMVDAVLEVSEYNRFSK  180
            +R+ R  +  ++   A  FYKL NKIS   + + V DFRLM R++V+ +  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFKTEYLEYKNVERVAGQTSWNFWQLFNYSLEGIINFSDAPLTI-AFVGGVVAC  239
            GI++WVG +T+ +EY   ERVAG +  N W+L N +LEGI +FS  PL + +++G  VA 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  240  llaffliiiviirtlifGDPTSGWPSMISIILFLGGFQLLTIGILGKYIGKIFMETKKRP  299
             ++F+    +II TL+FG+P  G PS++  ILFLGG QL+ IG+LG YIG+I++ETK RP
Sbjct  239  -ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  IYVIKERSK  308
             Y++K   K
Sbjct  298  KYILKKGRK  306

445) AB57_3034 in NC_011586


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (699),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 206/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNFSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    + +  EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIEADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + I+ D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDAKVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

446) ANA_C10138 in NC_019427


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (699),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 129/307 (43%), Positives = 199/307 (65%), Gaps = 11/307 (3%)

Query  10   SLVIPIYNEEENITEMYRRLHHVMEQLDGDVELILIDDGSRDRSLKMMRELHHRDNRVHY  69
            SLV+P++NEEE I   Y+ +++  E    +VE+++I+DGS+D +  ++  L   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  70   LSLARNFGHQIAVTAGLNFVQGKCIIVMDADLQDPPELILTMIEKWHQEYQVVYAQRISR  129
            LS++RNFG + A+ AGL+   G  +I +D DLQDP E+I  +IEKW+   ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  130  QQESRLKRLTAYLFYRILRRLAKVDIPVDTGDFCLMDRQVVDILNSMPERNRYIRGLRAW  189
              ++RLKR TA  FY++  +++   I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  190  VGFRQTSVLFERNPRFAGDVKYTFGKSLSLAIDGIISFSTVPLRLATYLGiisaaiamim  249
            VG +   V + R  R AG  K+   K  +LA++GI SFST PLR+ TY+G++ A+I+   
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS---  240

Query  250  iiLVLY--WRIFAPV---SHLIGYTLITISMFFLGSVQLICIGILGEYIGRIYEEVKGRP  304
                LY  W I+  +   + + GY  + +S++FLG+VQLI IG+LGEYIGRIY E K+RP
Sbjct  241  ---FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  305  LYTLKET  311
             Y LK  
Sbjct  298  KYILKKG  304

447) Spea_3629 in NC_009901


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (699),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 138/300 (46%), Positives = 212/300 (71%), Gaps = 2/300 (0%)

Query  17   LSVVVPLFNESKMIKPLIERLTAVLSRLDD-SSEIVFVDDGSSDDSWSQVSQLPLVDNEY  75
            +S+VVP+FNE   I P++ +    +  L     EIVF++DGS D + S ++ L++ D   
Sbjct  3    ISLVVPVFNEEEAI-PVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  76   QCIKLSRNFGKEAAMSAGIEHARGLVVIMLDADLQDPPELLPEMLAQWRAGYDIVNMKRR  135
              + ++RNFGKE+A+ AG++HA G  VI +D DLQDP E++P+++ +W+AG ++V  KR 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  136  KRLGETWFKRFSAGCFYKLMNWVSDSPVPENVGDFRLMSRQVIDSIKALPERNRFMKGLF  195
             R  + ++KR +A  FYKL N +S + + ENVGDFRLMSR+V+++IK LPERN FMKG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  196  SWPGFSQKTLEFDRDPRFIGETKWNYGKLFGLAMDGITSFSFKPLRLATWCGVLTALCAF  255
            SW G     +E+ R  R  G +K N  KL  LA++GITSFS  PLR+ T  G++ A  +F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  256  GYGGWIVVQTLIFGGSVAGYPSLMVVqlalagiqllalgligEYLGRVFVEVKQRPLYLI  315
             YG+W++++TL+FG +V GYPSL+V  L L+G+QL+++G++GEY+GR+++E K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

448) ABBFA_000857 in NC_011595


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (698),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 206/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNFSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    + +  EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

449) ABAYE0870 in NC_010410


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (698),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 206/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNFSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    + +  EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

450) AOLE_04210 in NC_014259


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (697),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVNGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRTLTQGYYRILNLSSPIDIPENAGDFRLLDAKVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I EN GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQDRQHGRSSFNVKSLFNLAMSGLTGFSDLPLRICIYLGALLALGAMSYGV  247
             ++  +++   +R  G S FN   L NLA+ G+T+FS +PLR+  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISVPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIVSTEH  307
            W+II TL+ G +V G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

451) SIR_0960 in NC_022246


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (697),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 136/309 (45%), Positives = 206/309 (67%), Gaps = 4/309 (1%)

Query  1    MTISIIIPCFNEEASLPLFYAEMEKIKQQIKEGFEYIFVNDGSKDRTLQVLRDLNQTDRN  60
            M IS+++P FNEE ++P+FY  +  +++      E +F+NDGSKD T  ++  L  +D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VHYLSFSRNFGKEAALYAGLQHATGDYVTVMDADLQDPPALLIQMKNMLDENAELDCVGT  120
            V  LSF+RNFGKE+AL+AGL+HA+GD V  +D DLQDP  ++ ++ +  +  AE+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRTTREGEPLIRSFFAKMFYKLINKISQVEMVDGARDFRLMRRQMVDAVLEVSEYNRFSK  180
            +R+ R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ +  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFKTEYLEYKNVERVAGQTSWNFWQLFNYSLEGIINFSDAPLTI-AFVGGVVAC  239
            GI++WVG +T+ +EY   ERVAG +  N W+L N +LEGI +FS  PL + +++G  VA 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  240  llaffliiiviirtlifGDPTSGWPSMISIILFLGGFQLLTIGILGKYIGKIFMETKKRP  299
             ++F+    +II TL+FG+P  G PS++  ILFLGG QL+ IG+LG YIG+I++ETK RP
Sbjct  239  -ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  IYVIKERSK  308
             Y++K   K
Sbjct  298  KYILKKGRK  306

452) Ccel_1307 in NC_011898


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (697),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 130/301 (44%), Positives = 204/301 (68%), Gaps = 4/301 (1%)

Query  6    LSIVVPVYNEQEVINETFKRLSG--VFKNYFMGVEYIFINDGSKDNTYFKLKEIANANTC  63
            +S+VVPV+NE+E I   +K +     +K Y   VE +FINDGSKD T   ++ +A ++  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPY--EVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VRVINFARNFGHQIAITAGMDYAQGDAVVIIDADLQDPPEVILQMVEQWNQGYEVVYGKR  123
            V  ++F+RNFG + A+ AG+D A GDAV+ ID DLQDP EVI +++E+W+ G E+V +KR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  LQREGETFFKKLTAKMFYRFLDSMTDVKLPVDVGDFRLIDRKVCDAMKCLPERSRYVRGL  183
             +R  +  +K+ TA  FY++ + ++  K+  +VGDFRL+ R V + +K LPER+ +++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  VSWVGFKQTSVEYRREKRFAGETKYPLKKMLKLAGDGIFSFSYKPLKLATFAGMLVSVIS  243
            +SWVG +   VEY R  R AG +K+   K+ +LA +GI SFS  PL++ T+ G++V+ IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIvvlvqklvknnvASGWASSMAVSLLFNGVMLIVIGIMGEYVGRIYEEVKARPLYV  303
            F+Y   ++++ LV  N   G +S +   L++ GV LI IG++GEY+GRIY E K+RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

453) M446_5303 in NC_010511


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (699),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 130/302 (44%), Positives = 208/302 (69%), Gaps = 2/302 (0%)

Query  10   VDLSVVIPVYNESANVGPLLARLLPVLERIGP-AFEVLFVDDGSRDataaviaahhaGEP  68
            + +S+V+PV+NE   + P++ + +  ++ + P   E++F++DGS+DAT ++I A   ++P
Sbjct  1    MKISLVVPVFNEEEAI-PVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  69   RIGAVSFSRNFGKEVAIAAGLDHARGRAVVLMDADLQHPPELIETFVALWREGNVMVYAQ  128
             + ++SF+RNFGKE A+ AGLDHA G AV+ +D DLQ+P E+I  ++  W+ G  MV A+
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  129  RMDRDGESRLRRGFARLFYRLFATFGEMPLPEGAGDFRLIDRKGVEVLRALPERARFSKG  188
            R DR  ++RL+R  A  FY+L   ++   + E  GDFRL+ R  VE ++ LPER  F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  189  LYSWIGFRSVGVPYAVEARHHGETKWSFRKLFRFAFDGITSFSTVPLRVWTylggaiaal  248
            + SW+G ++  V Y    R  G +K + +KL  +A++GITSFST PLRVWTY+G  +A++
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  249  aflaalyfVGEYLFRGPNVPGYASLIVSVMFFSGIQLMSLGIIGEYIGRIFAEVKRRPLY  308
            +FL +   + + L  G  V GY+SL+VS++F++G+QL+++G++GEYIGRI+ E K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  309  VV  310
            ++
Sbjct  300  IL  301

454) Daro_2759 in NC_007298


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (698),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 113/269 (43%), Positives = 185/269 (69%), Gaps = 1/269 (0%)

Query  85   EVIVVDDGSSDATPLLMTEW-VKKPGFSYLQLSRNFGKEAALTAGLEAAKGHAVVLLDAD  143
            E++ ++DGS DAT  ++    V  P    L ++RNFGKE+AL AGL+ A G+AV+ +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  144  LQHPVSLIPVMIKKWLSGIDNIYAVRKTREDESWIKRVGSQLFYKLLSTSRRVEVPAHAG  203
            LQ+P+ +IP +I KW +G + + A R  R  ++++KR  ++ FYKL +      +  + G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  204  DFRLMDRRVVEALLQLPERTRFMKGLYAWVGFQSEAIEYVPSDRLYGSSRFDIVKLLGLA  263
            DFRLM R VVE +  LPER  FMKG+ +WVG Q++ +EYV ++R+ G S+F+  KL  LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  264  LAGVTAFTTWPLRLVSGIGIFVAIPSFFYGLYLVVDYLLHGHQISGWTTIVTLQLFSSGI  323
            L G+T+F+T PLR+ + IG+FVA  SF+YG  +++D L+ G+ + G  +++   LF +G+
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  324  VLLSIGIVGEYLAQVFEEVKGRPLYLIRQ  352
             L++IG++GEY+++++ E K+RP Y++++
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILKK  303

455) PADK2_25575 in NC_018080


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (698),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 128/302 (43%), Positives = 203/302 (68%), Gaps = 9/302 (2%)

Query  17   LSVVVPVFNEEAVLPAFHQRLGAVLGDLGDDCEVLYVDDGSTDRSAAILAQLQAADRRVG  76
            +S+VVPVFNEE  +P F + +         + E+++++DGS D + +I+  L  +D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  77   VARFTRNFGKEQAMSAGLKLSRGAAVIVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRS  136
               FTRNFGKE A+ AGL  + G AVI ID DLQDP E+IP++++ W +GAEMV  +R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  137  RAGESWLKRASASAFYRLINRLSEVPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFA  196
            R+ +++LKR +A  FY+L N++S   I  +VGDFRL+ R VV+ +  LPE N FMKG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  197  WVGFRQVDIAYSRAARVAGHSKWRYWRLWNFALEGITGFSTAPlkvagylgllsllat--  254
            WVG +   + Y RA RVAG SK   W+LWN+ALEGIT+FST PL+V  Y+GL+    +  
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  255  ------llagIFGQQEIHEHWPVIAALFLIGSLQLLAIGVCSEYLGRMTMEARRRPLYLI  308
                  + + +FG+  ++   +++ +++++G++QL++IGV +EY+GR+ +E++ RP Y++
Sbjct  243  YGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  309  DR  310
             +
Sbjct  302  KK  303

456) Swoo_4251 in NC_010506


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (696),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 135/301 (45%), Positives = 214/301 (72%), Gaps = 2/301 (0%)

Query  16   LSIIIPVYNEAEVLPPLIARLSRVLSSIPESAEIVFIDDGSCDNTWELLQQLPVNSCEHQ  75
            +S+++PV+NE E +P +   +       P   EIVFI+DGS D T  +++ L+V+     
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  76   CIRLSRNFGKEAAMTAGLEQARGLAVILLDADLQDPPELIPQMLEAWRSGFDVVNMKRKK  135
             + ++RNFGKE+A+ AGL++A G AVI +D DLQDP E+IP+++E W++G ++V  KR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  136  RLGESWFKRFSAAAFYRIINGMAESPVPENVGDFRLLSRQVVDCINSLPERNRFMKGILS  195
            R  ++++KR +A  FY++ N ++ + + ENVGDFRL+SR+VV+ I+ LPERN FMKGILS
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  196  WPGFSQTEIL-FDRDPRYLGETKWNYSKLVGLAMDGITSFSIKPLRLATWAGILTALSAF  254
            W G +QT+++ + R  R  G +K N  KL  LA++GITSFS  PLR+ T  G++ A  +F
Sbjct  183  WVG-GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  255  TYGGWVLLKTMLWGETVVGYPSLMivqvalagvqllalgligEYLGRVFMEVKQRPIYLI  314
             YG+W+++ T++ G+ V GYPSL++  + L+GVQL+++G++GEY+GR+++E K RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  315  S  315
             
Sbjct  302  K  302

457) Cal7507_2922 in NC_019682


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (696),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 130/305 (43%), Positives = 203/305 (67%), Gaps = 7/305 (2%)

Query  7    SLVIPIYNEEENITEMYRRLINVMEQLDGEAELILIDDGSRDRSLSMIRELHQRDSRVLY  66
            SLV+P++NEEE I   Y+ + +  E    E E+++I+DGS+D + S+I  L   D+ V+ 
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  67   LSLARNFGHQIAVTAGLNFVQGKSVIVMDADLQDPPELILTMIEKWQEGYQVVYAQRLAR  126
            LS++RNFG + A+ AGL+   G +VI +D DLQDP E+I  +IEKWQ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  127  KKESWLKRFTAYAFYRILRRLANVDIPADTGDFCLMDRQVVDILNAMPERNRYIRGLRAW  186
              +++LKR TA  FY++  +++   I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  187  VGFRQTAVHFERDPRFAGEVKYTFGKSWALAVDGIISFSKVPLRLATYlgmlsaaaallm  246
            VG +   V++ R  R AG  K+   K W LA++GI SFS  PLR+ TY+G++ A+ ++L 
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  247  illvlYWRLFDPV---SPLIGFTLITLAMFFLGSVQLICIGILGEYIGRIYEEVKGRPIY  303
                  W ++D +   +P+ G+  + ++++FLG+VQLI IG+LGEYIGRIY E K+RP Y
Sbjct  244  GA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  304  TLKET  308
             LK  
Sbjct  300  ILKKG  304

458) Dtox_4310 in NC_013216


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (696),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 200/300 (67%), Gaps = 0/300 (0%)

Query  8    SIVVPVFNEEAVIAVTYERLKKVMDTTGESYELLFVNDGSSDQTAEIIDRICRQDDHVKL  67
            S+VVPVFNEE  I+V Y  ++   +      E++F+NDGS D T  II+ +   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   INFSRNFGHQIAISAGMDNALGQAVVVIDADLQDPPEVIWQMIERWKKGYEVVYATRKER  127
            ++F+RNFG + A+ AG+D+A G+AV+ ID DLQDP EVI ++IE+W+ G E+V A R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETLFKKWTAAAFYRLLKFITDIDIPVDTGDFRLIDRKVCNVMKNLKEKNRFVRGLVSW  187
              +  +K+ TA  FY+L + I+   I  + GDFRL+ R V + +K L E+N F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGFRQTAVEYVREERFAGESKYPLRKMIKLSLDAITTFSYKPLKLAVCLGFVFSSLSLVY  247
            VG +   VEYVR ER AG SK+  +K+ +L+L++IT+FS  PL++   +G+  +S+S++Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LFFALLERLIGTYTLPAWALLIAMGIFLNGIILSVLGIIGEYIGRIYDESKGRPLYIIAN  307
                +++ L+    + + + L+   +FL G+ L  +G++GEYIGRIY E+K+RP YI+ +
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

459) Geob_0317 in NC_011979


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  188 bits (696),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 127/307 (42%), Positives = 211/307 (69%), Gaps = 4/307 (1%)

Query  6    KFSIVVPVFNEEKVLPETYRRLHEVMEGLNEPYE--IIFVNDGSSDRTMFILDNICEQDR  63
            K+S+VVPVFNEE  +P  Y+ ++E  + L+ PYE  I+F+NDGS D T  I++ +   D 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDP  59

Query  64   HIRIIDFAKNFGHQTAITAGMdyadgdavvvidadLQDPPELIPQMIDRWREGYDVVYGK  123
             +  + F++NFG + A+ AG+D A GDAV+ ID DLQDP E+IP++I++W+ G ++V +K
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  124  RKERKGETLFKRFSAALFYRLMRKMTDVDIPVDTGDFRLIDRRVCDALKSIKERNRYIRG  183
            R +R  +  +KR +A  FY+L  K++   I  + GDFRL+ R V + +K + ERN +++G
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  184  IISWLGFRQIGVEFSREERFAGETKYPMKKMLKFAFDAITSFSFKPLKLSSYLGMSLSFF  243
            I+SW+G +   VE+ R ER AG +K+   K+ ++A+++ITSFS  PL++ +Y+G+ ++ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  244  SFVYLMVVVYQKFFTDRTVAGWASSMVISLFFNGIVLMMLGIAGEYIGRIYDETKGRPLY  303
            SF+Y   ++ + +  +  V G +S +V  LF+ G+ L+ +G+ GEYIGRIY ETK+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  304  VVRRVRN  310
            ++++ R+
Sbjct  300  ILKKGRK  306

460) CIY_26700 in NC_021031


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  187 bits (694),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 123/306 (41%), Positives = 211/306 (69%), Gaps = 4/306 (1%)

Query  6    LTIIVPCYNEEESLPIFYQTIRDMEKEDKLSSVDLEFVFVDDGSRDKTLEVCRNLHSQDE  65
            ++++VP +NEEE++P+FY+T+R+ +    L + ++E+VF++DGS+D T  +   L   D 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQE---LKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  66   RVHFVSFSRNFGKEAGIYAGLEKSKGDYVVIMDADLQDPPAMLPEMLTYIESGKYECVAT  125
             V  +SF+RNFGKE++++AGL+ + GD V+ +D DLQDP  ++P+++   ++G  E V +
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  126  RRVDRKGEPPIRSWFARKFYKLMNKISSADIVDGARDYQMMTRKVADAILSMKEYNRFSK  185
            +R DR  +  ++   A  FYKL NKIS++ I +   D+++M+R V + I  + E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  186  GIFGWVGFKRKWLEFENVERVAGETKWSFWKLFIYAIEGIVAFSTAPLIMASIFGMIMCL  245
            GI++WVG +   +E+   ERVAG +K + WKL   A+EGI +FST PL + + +G+++  
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  246  VAfifiiviivRTLTFGDPTNGWPSMVCIILLVSGIQLLCMGVLGEYLAKAYLETKNRPI  305
            ++F++   +I+ TL FG+P  G PS++  IL+++G+QL+ +GVLGEY+++ YLETK+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  306  YLVQEE  311
            Y+++  
Sbjct  299  YILKKG  304

461) Dacsa_3619 in NC_019780


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  187 bits (692),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 208/307 (68%), Gaps = 8/307 (2%)

Query  1    MISLVIPIYNEQGILEILYERIKVASAGWNQDYEVIFIDDGSSDYSLEIIQKLNQKDDRV  60
             ISLV+P++NE+  + ++Y  ++        + E++FI+DGS D +  II+ L   D  V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  61   KAISFSRNFGHQTAVSAGLKYSTGEIIVVMDGDLQDPPEQIINFLEQWQQGYQVVYAIRK  120
             ++SF+RNFG + A+ AGL  ++G+ ++ +D DLQDP E I +++E+WQ G ++V A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  121  KR-KEAWYKKLAYYSFYRLLNWMSSVKIPLDSGDFCLLDRTIVDHLNSLPERNRFVRGLR  179
             R  +++ K+ +   FY+L N +S+ KI  + GDF L+ R +V++++ LPERN F++G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  180  AWIGYKQIGIPYERNARLAGEAKYTFRKLIRLAFDGLINFSYRPLQVFTSLGIIVSLLSF  239
            +W+G +   + Y R  R+AG +K+  +KL  LA++G+ +FS  PL+V T +G++V+ +SF
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  240  LVAIYYLFAWILDPTV--REQLPGYTSIIIAILFLGGVQLISIGILGEYIGRIFDEVKAR  297
            L +     AW++  T+   + + GY S++++ILFLGGVQLI+IG+LGEYIGRI+ E K+R
Sbjct  242  LYG-----AWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  298  PLFIISQ  304
            P +I+ +
Sbjct  297  PKYILKK  303

462) BJAB0715_02996 in NC_021733


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (689),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDAKVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

463) ABD1_25760 in NC_020547


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (689),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDAKVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

464) gtrB in NC_018073


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (690),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 137/305 (45%), Positives = 208/305 (69%), Gaps = 4/305 (1%)

Query  1    MTISIIIPCFNEEESLPLFYAEMekikqqikeefqyiFVNDGSKDRTLQVLRDLNQTDRN  60
            M IS+++P FNEEE++P+FY  +  +++    E + +F+NDGSKD T  ++  L  +D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VHYLSFSRNFGKEAALYAGLQHATGDYVTVMDADLQDPPALLIQMKNMLDENAELDCVGT  120
            V  LSF+RNFGKE+AL+AGL+HA+GD V  +D DLQDP  ++ ++ +  +  AE+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRTTRKGEPQIRSFFAKMFYKLINKISQVEMVDGARDFRLMRRQMVDAVLEVSEYNRFSK  180
            +R+ R  + +++   A  FYKL NKIS   + +   DFRLM R++V+ +  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFKTEYLEYKNVERVAGQTSWNFWQLFNYSLEGIINFSDAPLTI-AFVGGVVAC  239
            GI++WVG +T+ +EY   ERVAG +  N W+L N +LEGI +FS  PL + +++G  VA 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  240  llaffliiiviirtlifGDPTSGWPSMISIILFLGGFQLLTIGILGKYIGKIFMETKKRP  299
             ++F+    +II TL+FG+P  G PS++  ILFLGG QL+ IG+LG YIG+I++ETK RP
Sbjct  239  -ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  VYIIK  304
             YI+K
Sbjct  298  KYILK  302

465) AXYL_00712 in NC_014640


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (690),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 112/269 (42%), Positives = 188/269 (70%), Gaps = 1/269 (0%)

Query  70   EIIVADDGSTDGTEALMAEWTEHDGFRY-VQLSRNFGKEAAISAGLEAATGNAVICLDAD  128
            EI+  +DGS D+TE+++   +  D +   + ++RNFGKE+A+ AGL+ A+G+AVI +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  129  LQHPPALIEQMLARWAAGAEMVYAVRETRADESWAKRAGARWFYKLLSGARGVDVPAHAG  188
            LQ+P  +I +++ +W AGAEMV A R  R+ +++ KR  A WFYKL +      +  + G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  189  DFRLMDRSVVNALIALPERTRFMKGLYAWVGFKGEALTYTPDERMHGDSRFGSMRLFRLA  248
            DFRLM R VV+ +  LPER  FMKG+ +WVG + + + Y   ER+ G S+F + +L  LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  249  LDGLTAFTTWPLRLVSLVGVafamlalayaaylVGEYLFFGNEVSGWTTIVTAVLFFAGV  308
            L+G+T+F+T PLR+ + +G+  A +++ Y+A ++ + L FGN V G  +++ ++LF++GV
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  309  NLISLGVVGEYVSRIFDEVKGRPLFVVRR  337
            +LI++GV+GEY++RI+ E K+RP +++++
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILKK  303

466) Bpet0641 in NC_010170


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (691),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 111/267 (42%), Positives = 183/267 (69%), Gaps = 1/267 (0%)

Query  70   EIIVVDDGSTDATPELMAEWTVLDGMRY-VQLSRNFGKEAALSAGFEAADGDAVICLDAD  128
            EI+ ++DGS DAT  ++   +V D +   + ++RNFGKE+AL AG++ A GDAVI +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  129  LQHPPALIGAMLQRWREGADMVYAVRTHRGDESWLKRTGARVFYRLLSGAHGVEVPAHAG  188
            LQ+P  +I  ++++W+ GA+MV A R++R+ +++LKR  A  FY+L +      +  + G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  189  DFRLMDRRVVEALVALPERTRFMKGLYAWVGFRAEPLPYTPDARAHGASRYGAWRLVRLA  248
            DFRLM R VVE +  LPER  FMKG+ +WVG +++ + Y    R  G S++ +W+L  LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  249  LDGLTAFTTWPLRLVSLLGCAFSLASFAYGSYLVLAYWFNGNQVSGWTTIITALLFFAGV  308
            L+G+T+F+T PLR+ + +G   +  SF YG+ +++     GN V G  +++ ++LF++GV
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  309  NLISLGVVGEYVARIFDEVKGRPLYVV  335
            +LI++GV+GEY++RI+ E K+RP Y++
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYIL  301

467) Dtox_4133 in NC_013216


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (689),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 124/302 (42%), Positives = 209/302 (70%), Gaps = 1/302 (0%)

Query  5    ISIVVPMYFEEKVVNECYMRLTSVLEQNKINYEIIFINDGSTDNTLQILETLAIKDSRVK  64
            IS+VVP++ EE  +   Y  +    E +  + EI+FINDGS D T  I+++LA+ D+ V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IINFSRNFGHQAAVTAGIENSFADAVVVIDADLQDPPELIPEMINLWENGYEVVYAKRKK  124
             ++F+RNFG ++A+ AG++++ +DAV+ ID DLQDP E+IP++I+ W+ G E+V AKR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGENWFKLITAKYFYRILSQMTEVSIPIDTGDFRLIDKKVIEEFKKMPEKNRFIRGMIS  184
            R  + ++K  TA  FY++ ++++   I  + GDFRL+ + V+E++K +PE+N F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WIGFKQIAIEYERDKRFAGDTKYPLKRMVKFALDGIISFSAKPLKllgilgfssvsislv  244
            W+G +   +EY R  R AG +K+   ++ ++AL+GI SFS+ PL++   +G+   SIS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  lllYTITVKFLNNNDVISGWASLMTTIIFFGGVQLLSVSVLGEYVGRIYDESKNRPLYII  304
                 I +  L   + + G +SL+ +I+F+GGVQL++++VLGEY+GRIY E+K+RP YI+
Sbjct  243  YGAWMI-IDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  305  DK  306
             K
Sbjct  302  KK  303

468) SHJG_3014 in NC_017765


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (689),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 128/311 (42%), Positives = 210/311 (68%), Gaps = 16/311 (5%)

Query  1    MLISIVAPCYNEEDVLARFHEEVQKVAEELLPLGHDMEFVYVDDGSRDRTLAVLKELADL  60
            M IS+V P +NEE+ ++ F   V+   +EL P   ++E+V+++DGS+D T ++++ LA  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKP--YEVEIVFINDGSKDATESIINALAVS  57

Query  61   DSRVRYVSFSRNFGKEAALLAGLRHASGDSVIVMDADLQHPPALIKRMVELREQGHDQVI  120
            D+ V  +SF+RNFGKE+AL+AGL HASGD+VI +D DLQ+P  +I +++E ++ G + V+
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVL  117

Query  121  AKRT--RTGDRFTRTVTARLYYRLVNRlvdvelvdgvgdFRLLSRRVVDAVLALTESNRF  178
            AKR+   T++R+ R  + + +Y+L N++    + + VGDFRL+SR VV+ +  L E N F
Sbjct  118  AKRSDRSTDGRLKRKTAEW-FYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  179  SKGLFAWVGFPSTTFEYQNAAREAGRS---SWNLRGLLNYGLDGLLSFNNRPLRAALWLG  235
             KG+++WVG  +   EY  A R AG S   +W+L+ L   +L+G+ SF+  PLR  +W  
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLR--VWTY  231

Query  236  VGLLLCAG--LYTAWIVGAALVHGVQTPGYVTIITAVTALAGVQMVMLGVIGEYTGRIYY  293
            +GL++ +   LY AW++  +LV G    GY +++ ++  L+GVQ++ +GV+GEY GRIY 
Sbjct  232  IGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYL  291

Query  294  EVKGRPHFLVK  304
            E K+RP +++K
Sbjct  292  ETKSRPKYILK  302

469) SHJGH_2779 in NC_020895


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (689),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 128/311 (42%), Positives = 210/311 (68%), Gaps = 16/311 (5%)

Query  1    MLISIVAPCYNEEDVLARFHEEVQKVAEELLPLGHDMEFVYVDDGSRDRTLAVLKELADL  60
            M IS+V P +NEE+ ++ F   V+   +EL P   ++E+V+++DGS+D T ++++ LA  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKP--YEVEIVFINDGSKDATESIINALAVS  57

Query  61   DSRVRYVSFSRNFGKEAALLAGLRHASGDSVIVMDADLQHPPALIKRMVELREQGHDQVI  120
            D+ V  +SF+RNFGKE+AL+AGL HASGD+VI +D DLQ+P  +I +++E ++ G + V+
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVL  117

Query  121  AKRT--RTGDRFTRTVTARLYYRLVNRlvdvelvdgvgdFRLLSRRVVDAVLALTESNRF  178
            AKR+   T++R+ R  + + +Y+L N++    + + VGDFRL+SR VV+ +  L E N F
Sbjct  118  AKRSDRSTDGRLKRKTAEW-FYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  179  SKGLFAWVGFPSTTFEYQNAAREAGRS---SWNLRGLLNYGLDGLLSFNNRPLRAALWLG  235
             KG+++WVG  +   EY  A R AG S   +W+L+ L   +L+G+ SF+  PLR  +W  
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLR--VWTY  231

Query  236  VGLLLCAG--LYTAWIVGAALVHGVQTPGYVTIITAVTALAGVQMVMLGVIGEYTGRIYY  293
            +GL++ +   LY AW++  +LV G    GY +++ ++  L+GVQ++ +GV+GEY GRIY 
Sbjct  232  IGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYL  291

Query  294  EVKGRPHFLVK  304
            E K+RP +++K
Sbjct  292  ETKSRPKYILK  302

470) gtrB in NC_010645


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (691),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 122/299 (41%), Positives = 198/299 (67%), Gaps = 2/299 (0%)

Query  39   QISCIVPCLNEADNLCVLLPALRNRLESLCSAWEIIVIDDGSTDNTAELMANWSGLDGFR  98
            +IS +VP +NE + + V+  ++R+  E      EI+ I+DGS D T  ++   +  D + 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  99   Y-IQLARNFGKEAAISAGLEAADGDVVICLDADMQHPPALIEEMLRRWQAGSEMVYAVRR  157
              + ++RNFGKE+A+ AGL+ A GD VI +D D+Q+P  +I +++ +WQAG+EMV A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  158  NRDDEGYFKRLGSDWFYRLLSG-SRVDVPAGAGDFRLMDRRVVNALVALPERTRFMKGLY  216
            +R  +G +KR  ++WFY+L +  S   +    GDFRLM R VV+ +  LPER  FMKG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  217  AWVGFKCEPLPYTPDSRMHGQSHFRPMKLIGLAMDGLTAFTTWPLRVVSMLGLVFALMSM  276
            +WVG + + + Y    R+ G S F   KL  LA++G+T+F+T PLRV + +GL  A +S 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  277  VYGAYLVGAYFLDGNPVSGWTTIVTALLFFAGINLLSLGVVGEYVARIFDEVKGRPLYI  335
            +YGA ++   ++ GNPV G  +++ ++LF++G++L+++GV+GEY++RI+ E K+RP YI
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

471) Msip34_1281 in NC_012969


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (690),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 123/303 (41%), Positives = 208/303 (69%), Gaps = 7/303 (2%)

Query  11   HITVIVPAFNEEAAIHLTLENIANQLNQLSP-NWDIVVIDDGSRDRTAQIVRNMPPFLNT  69
             I+++VP FNEE AI +    +  ++++L P + +IV I+DGS+D T  I+  ++  ++ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALA--VSD  58

Query  70   TLV---RFSRNFGKEYAISAGLEYATGDIVVCMDADGQHSSDLVSDMLAQWRQGYDMVYA  126
             LV    F+RNFGKE A+ AGL+ A+GD V+ +D D Q++ +++++++ +W+ G +MV A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  127  VRNDRAVESRFKRWGSRLFYRAISLGGQIHIPRDAGDFRLMDRKVVDALRALPERNRFMK  186
             R+DR+ ++R+KR  +  FY+  +  +   I  + GDFRLM R VV+ ++ LPERN FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  187  GMYAWVGYKSIGIPYTPLPRLHGESAFSRLRLMSLAWTGITSFSVIPLRLASAVGGILAL  246
            G+ +WVG ++  + Y    R+ G S F+  +L +LA  GITSFS +PLR+ + +G ++A 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  247  LAFIYGMTVVVDKLFLHESIPGWPTTIASIMFFSGVQLLFIGILGEYLARIYDEVKGRPP  306
            ++F+YG  +++D L + +++ G P+ + SI+F++GVQL+ IG+LGEY++RIY E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  307  YIV  309
            YI+
Sbjct  299  YIL  301

472) ABK1_2920 in NC_017162


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

473) ACICU_02866 in NC_010611


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

474) BJAB07104_02957 in NC_021726


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

475) BJAB0868_02837 in NC_021729


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

476) ABTJ_00849 in NC_017847


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

477) ABZJ_03051 in NC_017171


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

478) ABTW07_3088 in NC_017387


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

479) M3Q_3099 in NC_018706


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  10   VVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIEDYPLVV-LE  68
            VVP +NE E +  F  ++ +    +    EI+ ++DGSKD T +I++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVYGIR-NRTT  127
            ++RNFGKE+AL AGLDH +G+  + ID D+Q+P+E IP +I+ W+ G +MV + R +R+T
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +Y++ N  S   I E+ GDFRL+   VVE IK LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILALGAMSYGV  247
             ++  +++   ER  G S FN   L NLA+ G+T+FS +PLRV  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WIIIKTLIEGISIPGWATLAAGMTllggiqllfigilgEYIGRIYAEVKNRPKYIISTEH  307
            W+II TL+ G ++ G ++L  ++ +LGG+QL+ IG+LGEYIGRIY E K+RPKYI+   +
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

Query  308  S  308
             
Sbjct  306  K  306

480) csbB in NC_017668


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 134/303 (45%), Positives = 211/303 (70%), Gaps = 1/303 (0%)

Query  6    ISLILPSFNEEKNIPMIYEAIHNQMEPLHYDYELIFIDDGSQDHTLESIQMLASAHDQVK  65
            ISL++P FNEE  IP++Y ++++  E   Y+ E++FI+DGS+D T   I+ LA ++  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  66   YISFTRNFGKEAAMLAGLEKSKGEAVIILDADLQHPSSLLPAMVEGYEEGYDQVIARRT-  124
             +SFTRNFGKE+A++AGL+ + G+AVI +D DLQ+P  ++P ++E  + G + V+A+R+ 
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RTGESPLRKALSSTFYKVINQLVDVTLENGIGDFRLLSRAVVNDILKLSEGNRFSKGLFS  184
            R+ ++ L++  +  FYK+ N++    +E+ +GDFRL+SR VV++I  L+E N F KG++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGYEEKVINYENVSRQEGDSKWSFSKLLNYAIDGLVSFNTKPLRVCFYAGlltlllslG  244
            WVG +  V++Y    R  G SK +  KL N A++G+ SF+T PLRV  Y GL+   +S+ 
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  YIGFIFIEIIRTGIAVPGYFSTISAILFlggvqllslgvvgEYIGRIYNEVKRRPHYLVK  304
            Y + ++I+ +  G +V GY S + +ILFLGGVQL+++GV+GEYIGRIY E K RP Y++K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  305  DTN  307
               
Sbjct  303  KGR  305

481) RoseRS_3414 in NC_009523


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  186 bits (688),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 131/303 (44%), Positives = 206/303 (68%), Gaps = 5/303 (1%)

Query  26   SIVAPVYNEEALLPEFYRRVVAAIEPLGEPFE--IILVNDGSRDRSLQIMLELHERDPRV  83
            S+V PV+NEE  +P FY+  V  ++ L  P+E  I+++NDGS+D +  I+  L   DP V
Sbjct  4    SLVVPVFNEEEAIPVFYK-TVREFQEL-KPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  84   KVINFSRNFGHQIAITAGTDYARGRAVAVIDSDLQDPPEVIVDMIARWREGYQLIYGVRS  143
              ++F+RNFG + A+ AG D A G AV  ID DLQDP EVI ++I +W+ G +++ + RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  144  EREGETAFKLATASLFYRLIRKITSVDIPADTGDFRLMDRKVVDALKSMREHHRFMRGLS  203
            +R  +  +K  TA  FY+L  KI++  I  + GDFRLM R VV+ +K + E++ FM+G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  204  VWVGFKQTGVTYKRDARKAGVTKYPLRKMLKFAMDGITAFSYLPLQLATYvgfgvaalgl  263
             WVG +   V Y R  R AG++K+  +K+ ++A++GIT+FS +PL++ TY+G+ VA++++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  264  l-giiaviilrllgNELLGQATTLVAVLFMGGVQLVFLGILGEYLGRIYDEVKQRPLYIV  322
            L G   +I   ++GN + G ++ LV++LF+GGVQL+ +G+LGEY+GRIY E K RP YI+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  323  ADA  325
              +
Sbjct  302  KKG  304

482) Rcas_1513 in NC_009767


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  185 bits (687),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 133/303 (44%), Positives = 206/303 (68%), Gaps = 5/303 (1%)

Query  26   SIVAPVYNEEVLLPEFYRRVVAAIEPLGEPFE--IVLVNDGSRDRSLQIMLELHERDPRV  83
            S+V PV+NEE  +P FY+  V  ++ L  P+E  IV++NDGS+D +  I+  L   DP V
Sbjct  4    SLVVPVFNEEEAIPVFYK-TVREFQEL-KPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  84   KVINFSRNFGHQIAITAGTDYARGRAVAVIDSDLQDPPEVIVDMIARWREGYQLVYGVRS  143
              ++F+RNFG + A+ AG D A G AV  ID DLQDP EVI ++I +W+ G ++V + RS
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  144  EREGETAFKLATASLFYRLIRKITSVDIPADTGDFRLMDRKVVDALKSMREHHRFMRGLS  203
            +R  +  +K  TA  FY+L  KI++  I  + GDFRLM R VV+ +K + E++ FM+G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  204  VWVGFKQTGVTYKRDARKAGVTKYPLRKMLKFAMDGITAFSYLPLQLATYvgfgvaalgl  263
             WVG +   V Y R  R AG++K+  +K+ ++A++GIT+FS +PL++ TY+G+ VA++++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  264  l-giiaviilrllgNELLGQATTLVAVLFMGGVQLVFLGILGEYLGRIYDEVKQRPLYIV  322
            L G   +I   ++GN + G ++ LV++LF+GGVQL+ +G+LGEY+GRIY E K RP YI+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  323  ADA  325
              +
Sbjct  302  KKG  304

483) LEGAS_0760 in NC_014319


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  185 bits (686),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 127/304 (42%), Positives = 211/304 (70%), Gaps = 1/304 (0%)

Query  16   LSLVVPVHNEEETIQTFYDTLSALKDKLTATIQYHFVDDGSTDHTLSILRELANRDENVH  75
            +SLVVPV NEEE+I  FY T+  +++     ++  F++DGS D T SI+  LA  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  76   YISFSRNFGKEAGLYAGLQQTTGQYVAVMDVDLQDPPELLPQMLQDVQSGDYDAVGTRRA  135
             +SF+RNFGKE++L+AGL++++G+ V  +DVDLQDP E++P++++  Q+G  + V ++R+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRS  121

Query  136  DRSGEAKIRSWFSAQFYVWMNKISETQLVDGARDYRVMTRQMVNAILSMSENQRFSKGIF  195
            DRS +++++   +  FY   NKIS  ++ +   D+R+M+R++V+ I  ++E + F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  196  SWVGFKTKYIPFENRERVAGSTSWSFWSLSKYAIAGIVSFSTFPLTIITglgflsfgisl  255
            SWVG +T  + +   ERVAG +  + W L + A+ GI SFSTFPL + T +G++  +IS+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  256  lsaafIVIRALAYNNSAAGWPSIVTIILFIGGIQLLSLGVIGRYIAAIFLESKHRPIYIT  315
            L +A ++I +L + N+  G PS++  ILF+GG+QL+++GV+G YI+ I+LE+K RP YI 
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  316  REEK  319
            +  +
Sbjct  302  KKGR  305

484) blr7526 in NC_004463


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  185 bits (687),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 122/302 (41%), Positives = 202/302 (67%), Gaps = 5/302 (1%)

Query  22   LSIVVPVYNEAAGLAALHQRICDLAKTLRQRHRLACEVVYVDDGSADATLSIARSLPADA  81
            +S+VVPV+NE  +++ + + +    + +++      E+V+++DGS DAT SI  +L+   
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV----REFQELKPYEVEIVFINDGSKDATESIINALAVSD  58

Query  82   IDVQVVSLSRNFGKEAALMAGLDHARLGAVMFMDGDGQHPPALVEQLVGHWIDDGYDVVY  141
              V  +S++RNFGKE+AL AGLDHA  +AV+ +D D Q+P  ++ +L+  W + G ++V 
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEMVL  117

Query  142  TAKAHRDNETFLRRLAVHGFYALINWGARQKIPEDAGDFRLLSPRAVTALRQLPERNRFF  201
            + +++R  +  L+R + + FY L N  +  KI E+ GDFRL+S   V  ++ LPERN F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  202  KGLASWIGFRQIRVDYEPSPRAHGVTTFNAARLLGLSIEGLTSFSVAPLRFASLLGVVLA  261
            KG+ SW+G +   V+Y  + R  G++ FN+ +L  L++EG+TSFS  PLR  + +G+ +A
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  262  GIAFLFGLSILWEVFTTGKQVPGYPSLVVGLMTIGGVQLIMIGIVGEYIGKILSELKARP  321
            +I+FL+G  ++ + +  G+ V GYPSL+V+++ +GGVQLI IG++GEYIG+I  E K+RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  322  IY  323
             Y
Sbjct  298  KY  299

485) CLJU_c38890 in NC_014328


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  185 bits (685),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 131/307 (43%), Positives = 204/307 (67%), Gaps = 9/307 (2%)

Query  6    ISIVVPMYFEEEVASECYTRLSNVALKNDLNYELIFINDGSKDKTFNILKEIAKRDFHVK  65
            IS+VVP++ EEE  +  Y  + +    +  + E++FINDGSKD T +I++ +A  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  66   VISFSRNFGHQIAVTAGINKSNGDAVIIMDADLQDPPELIPKMIKLWEQGNDVVYGKRKK  125
             +SF+RNFG + A+ AG++ ++GDAVI +D DLQDP E+IP +I  W+ G ++V +KR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  126  RDGESVFKLITAKLFYKILNKMSSVTIPVDTGDFRLIDRKVVEVIKKMPEHNRFLRGMWS  185
            R  ++ +K  TA  FYK+ NK+S+  I  + GDFRL+ R VVE IK +PE+N F++G+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  186  WIGFKQVPLEYERKERFAGETKYPIKKMIRFALDGIISFSSKPLKVVEHLGLETILLSLI  245
            W+G +   +EY R ER AG +K+   K+  +AL+GI SFS+ PL+V   +GL   +++ I
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL---FVASI  239

Query  246  TFVY---LLVKILR-GTAVNSIGWVTTLTIACFIGGIQLFSIGIVGEYIARIYDESKCRP  301
            +F+Y   +++  L  G +V +    + L    F+GG+QL++IG++GEYI+RIY E+K RP
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYP--SLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  LYIIDKE  308
             YI+ K 
Sbjct  298  KYILKKG  304

486) ENT_26750 in NC_021023


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  185 bits (685),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 132/310 (43%), Positives = 210/310 (68%), Gaps = 9/310 (2%)

Query  2    LSIVVPCYNEEAAIPLFFEEVEKISQQLSHSVEYIFVNDGSKDNTLAVLRQLYREHPEKV  61
            +S+VVP +NEE AIP+F+  V  + +  +  VE +F+NDGSKD T +++  L   +P  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYLSFSRNFGKEAGLYAGLKEATGDLVTVMDVDLQDPPELLPQMIEMIETNTDLDCVGTR  121
              LSF+RNFGKE++L+AGL +A+GD V  +DVDLQDP E++P++IE  ++ +++  V ++
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  122  RITRDGEPPIRSFFARMFYKLINRIAETEMVDGARDFRVMTRQMVDAILELSEYNRFSKG  181
            R  R  +  ++   A  FYKL N+I+   + +   DFR+M+R++V+ I  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFKTEYIEFKNRERIAGET---SWSFWSLLSYSIDGIVNFSETPLNIASYVGAFS  238
            I+SWVG +T+ +E+   ER+AG +   +W +W+L   +++GI +FS  PL + +Y+G F 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  239  CIGSALAMLVIIFRTLVNGDPTSGWPSMVCIVLFVgglqllclgiigKYIGKIFLETKKR  298
               S L    +I+ TLV G+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYIVKESEK  308
            P YI+K + K
Sbjct  297  PKYILKKGRK  306

487) PMT1934 in NC_005071


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  185 bits (685),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 133/310 (43%), Positives = 213/310 (69%), Gaps = 13/310 (4%)

Query  13   QIWVVAACFNEEAVICHFIERVLALPEVS----HLLLVDDGSRDATVAQIRSWQQRFVGS  68
            +I +V + FNEE  I  F   V  + E+     ++++++DGS+DAT + I +       +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINAL------A  55

Query  69   KASTPVTLLELTRNFGKESAMLAGLDYAQDHCDAVVLIDSDLQHPPELITQMAQAWRGGA  128
             +   V  L +TRNFGKE+A++AGLD  +   DAV+ ID DLQ+P E+I ++ + W++GA
Sbjct  56   VSDPLVVPLSFTRNFGKEPALFAGLD--HASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA  113

Query  129  EVVTAVRDDRDQESRLKVTTSSWFYSVFNRVVDSIQLIDGAGDFRLLSAPVVQALTQMRE  188
            E+V A R DR  ++RLK  T+ WFY + N++  + ++ +  GDFRL+S  VV+ +  + E
Sbjct  114  EMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTP-KIEENVGDFRLMSREVVENIKLLPE  172

Query  189  FSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVIPLKIWSFL  248
             + F KG+L+W G ++  + Y R  R++G S  +  KLW+ AL+GI SFS +PL++W+++
Sbjct  173  RNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYI  232

Query  249  GLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFlggiqligigvlgEYIGRIYVD  308
            GL V+ IS+LY+A +++ T+  G  + GY+SL+V++LFLGG+QLIGIGVLGEYIGRIY++
Sbjct  233  GLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLE  292

Query  309  TKARPHYFIR  318
            TK+RP Y+++
Sbjct  293  TKSRPKYILK  302

488) cce_0378 in NC_010546


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  185 bits (686),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 127/308 (42%), Positives = 203/308 (66%), Gaps = 12/308 (3%)

Query  1    MLISIIIPCYNEQEVIQITHNRLVSVLEKITP-QFELIYVDDGSQDQTADHLRQLQQKDE  59
            M IS+++P +NE+E I +   + V  ++ + P + E+++++DGS+D T   +  L   D 
Sbjct  1    MKISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   RVKVVLLSRNFGHQMAVTAGLDHICGDAVVLIDADLQDPPEVIQEMIDRWYEGYDVAYGV  119
             V  + ++RNFG + A+ AGLDH  GDAV+ ID DLQDP EVI ++I++W  G ++  + 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RTDRQGETPFKLWSAKAFYRIMNRLSDVTIPLDTGDFRLMDRQVVEALKMMPERDRFLRG  179
            R+DR  +  +K  +A  FY++ N++S   I  + GDFRLM R+VVE +K++PER+ F++G
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  180  MVSWVGFRQVAVPYQRSPRLAGVSKYPLFKMIRFAADGILSFSLVPLRVAIWA--GLFTV  237
            ++SWVG +   V Y R+ R+AG+SK+   K+  +A +GI SFS  PLRV  W+  GLF  
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIGLFVA  237

Query  238  ALSIIGIIYALFVRLFTLSW---VPGWTISFIAILFIGGIQLVFLGVIGEYIGRIYREDK  294
            +   I+++Y+  + + TL     V G    +++ILF+GG+QL+ +GV+GEYIGRIY E K
Sbjct  238  S---ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  295  RRPLYLVR  302
             RP Y+++
Sbjct  295  SRPKYILK  302

489) GEI7407_2686 in NC_019703


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  185 bits (685),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 126/306 (42%), Positives = 205/306 (67%), Gaps = 7/306 (2%)

Query  6    SLVIPIYNEEATIPEMYRRVGAVMDGLDGPCELILVNDGSrdrslallrdlrdrdprVCY  65
            SLV+P++NEE +IP  Y+ V    +      E++++NDGS+D + +++  L   DP V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  66   LSFARNFGHQTAVTAGLNFARGRIVIVLDADLQDPPELIPAMVEQWRAGyqvvyaqrvqr  125
            LSF+RNFG + A+ AGL+ A G  VI +D DLQDP E+IP ++E+W+AG ++V A+R +R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  126  rqESWFKRLTAYGFYRVLRHLADVDIPTDTGDFCLMDRQVVEALNAMPERNRYLRGLRAW  185
              ++++KR TA  FY++   ++   I  + GDF LM R+VVE ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  186  AGFRQTAIPFQRDPRFAGEVKYTFRKSLALAIDGLVSFSKVPLRMSTYVGLLSAAIALLM  245
             G +   + + R  R AG  K+  +K   LA++G+ SFS  PLR+ TY+GL+ A+I++L 
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  246  GLLVLYWRLFEP---NSPLTGFATIAIAIFFLGAVQLVSIGILGEYIGRIYEEVKGRPLY  302
            G     W +++     +P+ G++++ ++I+FLG+VQL++IG+LGEYIGRIY E K+RP Y
Sbjct  244  GA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  303  TLAEVK  308
             L   +
Sbjct  300  ILKKGR  305

490) EFD32_2511 in NC_018221


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (684),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 133/310 (43%), Positives = 211/310 (69%), Gaps = 9/310 (2%)

Query  2    LSIVVPCYNEEAAIPLFFEEVEKISQQLSHSVEYIFVNDGSKDKTLAVLRQLYREHPEKV  61
            +S+VVP +NEE AIP+F+  V  + +  +  VE +F+NDGSKD T +++  L   +P  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYLSFSRNFGKEAGLYAGLKEATGDLVTVMDVDLQDPPELLPQMIEMIETSADLDCVGTR  121
              LSF+RNFGKE++L+AGL +A+GD V  +DVDLQDP E++P++IE  +++A++  V ++
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  122  RITRDGEPPIRSFFARMFYKLINRIAETEMVDGARDFRVMTRQMVDAILELSEYNRFSKG  181
            R  R  +  ++   A  FYKL N+I+   + +   DFR+M+R++V+ I  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFKTEYIEFKNRERIAGET---SWSFWSLLSYSIDGIVNFSETPLNIASYVGAFS  238
            I+SWVG +T+ +E+   ER+AG +   +W +W+L   +++GI +FS  PL + +Y+G F 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  239  CIGSALAMLVIIFRTLVNGDPTSGWPSMVCIVLFVgglqllclgiigKYIGKIFLETKKR  298
               S L    +I+ TLV G+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYIVKESEK  308
            P YI+K + K
Sbjct  297  PKYILKKGRK  306

491) EFS1_2314 in NC_019770


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (684),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 133/310 (43%), Positives = 211/310 (69%), Gaps = 9/310 (2%)

Query  2    LSIVVPCYNEEAAIPLFFEEVEKISQQLSHSVEYIFVNDGSKDKTLAVLRQLYREHPEKV  61
            +S+VVP +NEE AIP+F+  V  + +  +  VE +F+NDGSKD T +++  L   +P  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYLSFSRNFGKEAGLYAGLKEATGDLVTVMDVDLQDPPELLPQMIEMIETSADLDCVGTR  121
              LSF+RNFGKE++L+AGL +A+GD V  +DVDLQDP E++P++IE  +++A++  V ++
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  122  RITRDGEPPIRSFFARMFYKLINRIAETEMVDGARDFRVMTRQMVDAILELSEYNRFSKG  181
            R  R  +  ++   A  FYKL N+I+   + +   DFR+M+R++V+ I  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFKTEYIEFKNRERIAGET---SWSFWSLLSYSIDGIVNFSETPLNIASYVGAFS  238
            I+SWVG +T+ +E+   ER+AG +   +W +W+L   +++GI +FS  PL + +Y+G F 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  239  CIGSALAMLVIIFRTLVNGDPTSGWPSMVCIVLFVgglqllclgiigKYIGKIFLETKKR  298
               S L    +I+ TLV G+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYIVKESEK  308
            P YI+K + K
Sbjct  297  PKYILKKGRK  306

492) EF2908 in NC_004668


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (684),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 132/310 (43%), Positives = 211/310 (69%), Gaps = 9/310 (2%)

Query  2    LSIVVPCYNEEAAIPLFFEEVEKISQKLSHSVEYIFVNDGSKDNTLAVLRQLYREHPEKV  61
            +S+VVP +NEE AIP+F+  V  + +  +  VE +F+NDGSKD T +++  L   +P  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYLSFSRNFGKEAGLYAGLKEATGDLVTVMDVDLQDPPELLPQMIEMIETSTDLDCVGTR  121
              LSF+RNFGKE++L+AGL +A+GD V  +DVDLQDP E++P++IE  ++++++  V ++
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  122  RITRDGEPPIRSFFARMFYKLINRIAETEMVDGARDFRVMTRQMVDAILELSEYNRFSKG  181
            R  R  +  ++   A  FYKL N+I+   + +   DFR+M+R++V+ I  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFKTEYIEFKNRERIAGET---SWSFWSLLSYSIDGIVNFSETPLNIASYVGAFS  238
            I+SWVG +T+ +E+   ER+AG +   +W +W+L   +++GI +FS  PL + +Y+G F 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  239  CIGSALAMLVIIFRTLVNGDPTSGWPSMVCIVLFVgglqllclgiigKYIGKIFLETKKR  298
               S L    +I+ TLV G+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYIVKESEK  308
            P YI+K + K
Sbjct  297  PKYILKKGRK  306

493) P9303_25741 in NC_008820


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (684),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 133/310 (43%), Positives = 214/310 (70%), Gaps = 13/310 (4%)

Query  13   QIWVVAACFNEEVVICQFIERVLALPAVS----HLLLVDDGSRDGTVAQIRSWQQRFVGS  68
            +I +V + FNEE  I  F   V  +  +     ++++++DGS+D+T + I +       +
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINAL------A  55

Query  69   KASAPVTLLELTRNFGKESAMLAGLDYAQGHCDAVVLIDSDLQHPPELITQMAQAWRDGA  128
             + + V  L +TRNFGKE+A++AGLD A G  DAV+ ID DLQ+P E+I ++ + W+ GA
Sbjct  56   VSDPLVVPLSFTRNFGKEPALFAGLDHASG--DAVIPIDVDLQDPIEVIPHLIEKWQAGA  113

Query  129  EVVTAVRDDRDQESRLKVTTSSWFYRVFNRVVDSIQLIDGAGDFRLLSAPVVQALTQMRE  188
            E+V A R DR  ++RLK  T+ WFY++ N++  + ++ +  GDFRL+S  VV+ +  + E
Sbjct  114  EMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTP-KIEENVGDFRLMSREVVENIKLLPE  172

Query  189  FSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVIPLKIWSFL  248
             + F KG+L+W G ++  + Y R  R++G S  +  KLW+ AL+GI SFS +PL++W+++
Sbjct  173  RNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYI  232

Query  249  GLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFlggiqligigvlgEYIGRIYVD  308
            GL V+ IS+LY+A +++ T+  G  + GY+SL+V++LFLGG+QLIGIGVLGEYIGRIY++
Sbjct  233  GLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLE  292

Query  309  TKARPHYFIR  318
            TK+RP Y+++
Sbjct  293  TKSRPKYILK  302

494) Mar181_1407 in NC_015559


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (684),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 139/304 (46%), Positives = 214/304 (71%), Gaps = 4/304 (1%)

Query  26   VTVIIPFLNESDVLEQCHQRVCHALSTLQR-SCEIVYVDDGSQDSSWQLVSQFQHPTHKI  84
            +++++P +NE + +     +  + +  L+    EIV+++DGS+D++  +++ +  +   +
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  85   HSLRLSRNFGKEAALSAGLKFASGQCVILLDADLQDPPEYIPDMVEAWQQGAQVIEMQRR  144
             +L ++RNFGKE+AL AGL  ASG+ VI +D DLQDP E IP+++E WQ GA+++  +R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  145  ERQGENWLKRTTAHCFYRFMSYISDAPITENVGDFRLMDKKVVEVINTLPERTRFMKGLL  204
            +R  + +LKR TA+ FY++ + IS + I ENVGDFRLM + VVE I+ LPER  FMKG+L
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  205  AWPGFTRQVMTFDREPRLAGKTKWNYPKLIHLALEGITSFSTKPLR-WATIAGLTTSFFT  263
            +W G   +V+ + R  R+AG +K N  KL +LALEGITSFST PLR W+ I GL  + ++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYI-GLFVASIS  240

Query  264  FVMAMVVLTKTLVWGDPVVGYPSTVliilflggiqllsigVLGEYVGRLFIESKQRPLYV  323
            F+ +  ++  TLV G+PV GYPS ++ ILFLGG+QL++IGVLGEY+GR+++E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  324  LMEE  327
            L   
Sbjct  301  LKKG  304

495) OG1RF_12208 in NC_017316


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (683),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 132/310 (43%), Positives = 211/310 (69%), Gaps = 9/310 (2%)

Query  2    LSIVVPCYNEEAAIPLFFEEVEKISQQLSHSVEYIFVNDGSKDKTLAVLRQLYREHPEKV  61
            +S+VVP +NEE AIP+F+  V  + +  +  VE +F+NDGSKD T +++  L   +P  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYLSFSRNFGKEAGLYAGLKEATGDLVTVMDVDLQDPPELLPQMIEMIETSTDLDCVGTR  121
              LSF+RNFGKE++L+AGL +A+GD V  +DVDLQDP E++P++IE  ++++++  V ++
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  122  RITRDGEPPIRSFFARMFYKLINRIAETEMVDGARDFRVMTRQMVDAILELSEYNRFSKG  181
            R  R  +  ++   A  FYKL N+I+   + +   DFR+M+R++V+ I  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFKTEYIEFKNRERIAGET---SWSFWSLLSYSIDGIVNFSETPLNIASYVGAFS  238
            I+SWVG +T+ +E+   ER+AG +   +W +W+L   +++GI +FS  PL + +Y+G F 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  239  CIGSALAMLVIIFRTLVNGDPTSGWPSMVCIVLFVgglqllclgiigKYIGKIFLETKKR  298
               S L    +I+ TLV G+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYIVKESEK  308
            P YI+K + K
Sbjct  297  PKYILKKGRK  306

496) Clocel_1542 in NC_014393


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (683),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 127/304 (42%), Positives = 203/304 (67%), Gaps = 8/304 (2%)

Query  6    ISVVIPMYFEELVAEECYNRLTKVMQDNNYNYELIFINDGSRDKTIDILKRIARADAKVK  65
            IS+V+P++ EE      Y+ +    + + Y+ E++FINDGS+D T  I++ +A +D+ V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  66   VIDFSRNFGHQTAVTAGIDYSKGDAVVIIDADLQDPPELIYDMVKLWQQGFDVVYAKRKK  125
             + F+RNFG + A+ AG+D + GDAV+ ID DLQDP E+I +++  WQ G ++V AKR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  126  RKGETFFKLTTAKYFYKFLAYMSDIEIPKNTGDFRLIDRKVADAFSSMKERNRFVRGMIS  185
            R  +  +K  TA  FYK+   +S   I  N GDFRL+ R V + +  + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  186  WVGYNQTYVEYERDERFAGETKYPLKKMINFAADGIIAFSSKPLKLIMSIGFIAVIISFI  245
            WVG +   VEY R ER AG +K+   K+ N+A +GI +FS+ PL++   IG++   ISF+
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  246  ----VLIYSLVYRFSGHDIERGWTSIMVAITFFSGVQMLSLGVVGQYIARIYDESKSRPL  301
                ++I +LV+   G+ + RG  S++V+I F++GVQ++++GV+G+YI+RIY E+KSRP 
Sbjct  243  YGAWMIIDTLVF---GNPV-RGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YLIK  305
            Y++K
Sbjct  299  YILK  302

497) wcaA in NC_014733


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (684),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 125/303 (42%), Positives = 205/303 (68%), Gaps = 7/303 (2%)

Query  11   HITVIVPAFNEEAAIHLTLENIANQLNQLSP-NWDIVVIDDGSRDRTAQIVRNMPPFLNT  69
             I+++VP FNEE AI +    +  ++++L P + +IV I+DGS+D T  I+  ++  ++ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALA--VSD  58

Query  70   TLV---RFSRNFGKEYAISAGLEYAKGDIVVCMDADGQHSSELVTEMLAQWRLGYDMVYA  126
             LV    F+RNFGKE A+ AGL+ A GD V+ +D D Q++ E++ +++ +W+ G +MV A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  127  VRNDRAVESRFKRWGSRLFYRAISLGGQIHIPRDAGDFRLMDRKVVDALRALPERNRFMK  186
             R+DR+ ++R+KR  +  FY+  +  +   I  + GDFRLM R VV+ ++ LPERN FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  187  GMYAWVGYKSIGIPYTPLPRLHGESAFSRLRLMSLAWTGITSFSVIPLRLASAVGGILAL  246
            G+ +WVG ++  + Y    R+ G S F+  +L +LA  GITSFS +PLR+ + +G ++A 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  247  LAFIYGMTVVIDKLFMHESIPGWPTTIASIMFFSGVQLLFIGILGEYLARIYDEVKGRPP  306
            ++F+YG  ++ID L   +++ G P+ + SI+F++GVQL+ IG+LGEY++RIY E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  307  YIV  309
            YI+
Sbjct  299  YIL  301

498) CCU_19750 in NC_021018


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (683),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 124/309 (41%), Positives = 200/309 (65%), Gaps = 6/309 (1%)

Query  3    KVSLIIPCYNEEQALPIFAGELDKVR--QELRQYDFEVLMVNDGSSDKTLETMKKISEEY  60
            K+SL++P +NEE+A+P+F      VR  QEL+ Y+ E++ +NDGS D T   ++ ++   
Sbjct  2    KISLVVPVFNEEEAIPVF---YKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSD  58

Query  61   DYFKYLSFSRNFGKEAAMYAGFCNADGDYVAVMDADMQDPPSLLPEMLGILEQGEYDSVA  120
                 LSF+RNFGKE+A++AG+ +A GD V  +D D+QDP  ++P+++   + G  + V 
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVL  117

Query  121  TRRVTRKGEPPIRSWFARMFYKIINKISDADVVDGARDFRLMKAEMKDAIVSMCEYNRFS  180
            ++R  R  +  ++   A  FYK+ NKIS + + +   DFRLM  E+ + I  + E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  181  KGIFGWIGFRTKWLEYENVERVAGETKWNFWKLFKYALDGIINFSEAPMSIASGFGIFCT  240
            KGI++W+G +T  +EY   ERVAG +K N WKL + AL+GI +FS  P+ + + +G+F +
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  FVAFVMMLFFFIRKLVWGDPVAGWPSLVCIILFVSGLQFLCIGIMGKYIAKTYMETKGRP  300
             ++F+     +I  LV G+PV G PSL+  ILF++G+Q++ IG++G YI++ Y+ETK+RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  HYIISDTNK  309
             YI+    K
Sbjct  298  KYILKKGRK  306

499) STHERM_c17660 in NC_014484


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (681),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 134/302 (45%), Positives = 204/302 (68%), Gaps = 0/302 (0%)

Query  2    ISIIIPVYNEEEVLPALYERLTRVMEGTGEAYELVFVDDGSTDRTYQLLKDLHRRDPRCK  61
            IS+++PV+NEEE +P +Y  +    E      E+VF++DGS D T  +++ L   DP   
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   VIHFSRNFGHQIAITAGMDHARGDAVIIIDADLQDPPELIPRMLEKWRAGAQIVHARRVK  121
             + F+RNFG + A+ AG+DHA GDAVI ID DLQDP E+IP+++EKW+AGA++V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  122  RKGEGLFKRATAALFYRILKALTDVEIPVDVGDFRLMDRKVVDSLKGMRERNRFVRGLVS  181
            R  +G +KR TA  FY++ + ++   I  +VGDFRLM R VV+++K + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  182  WTGFRQDEVTYVRDPRYAGTTKYPLGKMIRFALNGITSFSDKPlkvasllgsllslagfl  241
            W G + D V YVR  R AG +K+   K+  +AL+GITSFS  PL+V + +G +++  +FL
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  242  yllyvlylrlfTDRVVQGWASIVVLILVFNGFTLLSLGILGEYVGRIYDEVKQRPLYIVE  301
            Y   ++   L  +  V+G +S++V IL + G  L+++G+LGEY+GRIY E K RP YI+ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  302  EA  303
             +
Sbjct  303  KG  304

500) XOC_3227 in NC_017267


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (683),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 129/305 (43%), Positives = 222/305 (73%), Gaps = 1/305 (0%)

Query  15   RLTVVIAAFNEETSIPLLHPRLCAVLAQLHGLQTHVLYVDDGSTDGTWDVLHALTEADAN  74
            ++++V++ FNEE +IP++   +   + +L   + ++++++DGS D+T  +++AL+ +D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  75   VSAVRLSRNFGKELAISAGLDHVLPGAVVLLDADGQDLPELIPEFVALWRSGYDNIFGTR  134
            V ++ ++RNFGKE A+ AGLDH   +AV+ +D D QD  E+IP+++  W++G + +++ R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  135  VFREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVEALQQLRERHRFMKGL  194
              R  +++LKR +A+ FY++  ++S   I  + GDFRL+S  VVE ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  195  FGWVGFRQVALPYRRAPRLSGNSKFTVWRLWNFALDGITSFSTVPlraatylglltalla  254
            ++WVG +   + Y RA R++G SKF  W+LWN+AL+GITSFST PLR  TY+GL+ A ++
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  255  FVFGGWVVIKATLVGDPVAGWPTMMSVilflggiqlialgligEYLGRLYDEAKQRPLYL  314
            F++G+W++I + + G+PV G P+++  ILFLGG+QLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  315  VDTHR  319
            +   R
Sbjct  301  LKKGR  305

501) A284_09785 in NC_020164


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  184 bits (683),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 130/311 (42%), Positives = 205/311 (66%), Gaps = 13/311 (4%)

Query  1    MNIRVIIPCYNEGEVVLKTYEKLTEILKQDSINKQYEYDLLFIDDGSKDSTIDHLQNLAL  60
            M+I +++P +NE E +   Y  + E+  Q+   K YE +++FI+DGSKD+T   ++ LA+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF--QEL--KPYEVEIVFINDGSKDATESIINALAV  56

Query  61   ADHHVKYISFSRNFGKEAAMVAGYQHSEHCDAVVMIDADLQHPPEFIPQMVEGYNEGYDQ  120
            +D  V  +SF+RNFGKE+A+ AG +H+   DAV+ ID DLQ+P E IP+++E  + G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHAS-GDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRKGENVARKSMTRAYYKLINAFVEDVQFEDGVGDFRLLSKRAVQALTSMDEYN  179
            V+AKR DR  +   ++  +  +YKL N  +   ++E+ VGDFRL+S+  V+ +  + E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYENVEREAGESK---WSFAKLLNYGIDGLISFNNKPLRMMIY  236
             F KG++ W+G +T V  Y   ER AG SK   W   KL N +++G+ SF+  PLR+  Y
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGW---KLWNLALEGITSFSTFPLRVWTY  231

Query  237  LGMFTFslsvlylvyllINIMISGVNIPGYFTTIAAITLLGGIQLMSIGVIGEYIGRIYY  296
            +G+F  S+S LY   ++I+ ++ G  + GY + + +I +LGG+QL++IGV+GEYIGRIY 
Sbjct  232  IGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYL  291

Query  297  EVKKRPKYIVQ  307
            E K RPKYI++
Sbjct  292  ETKSRPKYILK  302

502) AZOLI_2370 in NC_016622


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  183 bits (679),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 131/307 (43%), Positives = 209/307 (69%), Gaps = 6/307 (1%)

Query  35   RLSVVIPFYNEGPNIDALFARLTPVLEGLDMDWEVVCVNDGSRDNTVDRLLDVHDRDPRV  94
            ++S+V+P +NE   I  ++  +    E    + E+V +NDGS+D T   +  +   DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  95   KVVDLSRNFGKELALSAGLSHTTGDAVVPMDADLQHPPELLPDFIAKWREGFDVVVAVRH  154
              + ++RNFGKE AL AGL H++GDAV+P+D DLQ+P E++P++I KW+ G ++V+A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  155  ARVGQSLKHRLFAKLFYWVFDHLSEVKLPREVGDFRLMDRRVVEVINRMPERTRFMKGIF  214
             R  ++   R  A  FY + + +S  K+  +VGDFRLM R VVE I+ +PER  FMKGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  215  AWVGFRQAAIPYEQGERAGGDTK---WGFVKLLRLSFDGLTAFSTFPLRVWSLVGVAVSG  271
            +WVG +   + Y ++ER +G +K   W   KL  L+++G+T+FSTFPLRVW+ +G+ V++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGW---KLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  272  VAFVYILIRLVRTLFHGIDVPGYESLLVAVlflggiqlitlgiigDYLGRVFAEVKGRPL  331
            ++F+Y    ++ TL  G  V GY SLLV++LFLGG+QLI +G++G+Y+GR++ E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  332  FIVRSAH  338
            +I++ ++
Sbjct  299  YILKKGR  305

503) RC1_0152 in NC_011420


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  183 bits (680),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 127/302 (43%), Positives = 205/302 (68%), Gaps = 0/302 (0%)

Query  51   LSAILPMYNEAGNLARLFERLEGVLGRLRMDYEIICIDDGSRDGTFEALLFHRLRNPRIK  110
            +S ++P++NE   ++ ++  +         + EI+ I+DGS+D+T   +    + +P + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  111  PVRLSRNFGKeaamaagleraagaavvlLDSDLQHPPELIEAMVAHWRDGAEMVYARRTS  170
            P+ ++RNFGKE+A+ AGL++A+G AV+ +D DLQ+P E+I  ++  W+ GAEMV A+R+ 
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  171  RDTDGWlrrtltrayyrlyralSEVDLPPGAGDFRLLDRRVVDAIIAMPERRRFLKGMMA  230
            R TDG+L+R  +  +Y+L   +S   +    GDFRL+ R VV+ I  +PER  F+KG+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  231  WVGFRQVAIPYEPEARHAGSSTWNFWRLFTLAFDGLASFTTLPLRIWSVIGLFVALVAMA  290
            WVG +   + Y    R AG S  N W+L  LA++G++SF+T+PLR+W+ IGLFVA ++  
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  291  YGGVIAVRTLVYGVDVPGYASLMVATLFLGGVQLICLGVLGDYLGRVFEEVKRRPVYLVA  350
            YG+ + + TLV+G  V GY+SL+V+ LFLGGVQLI +GVLG+Y+GR++ E K RP Y++ 
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  351  EA  352
             +
Sbjct  303  KG  304

504) Cphy_0299 in NC_010001


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  183 bits (677),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 127/305 (42%), Positives = 197/305 (65%), Gaps = 9/305 (2%)

Query  3    RLTAVVPCFNEEEVLPMFYEEIMNVAECLKNEVEFEVLFVNDGSTDGTLQEIRKLRERDK  62
            +++ VVP FNEEE +P+FY  + +  E LK   E E++F+NDGS D+T   I  L   D 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQE-LKP-YEVEIVFINDGSKDATESIINALAVSDP  59

Query  63   RVKLVSFSRNFGKEAAMYAGLEHSTGDFVAILDADLQHPPKM---LIEMYHGIVLEGYDS  119
             V  +SF+RNFGKE+A++AGL+H++GD V  +D DLQ+P  +   LIE  ++    G + 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQA----GAEM  115

Query  120  VAAKRVTRDGEPKIRSFFSKKFYNILCKLSKIEIVEGSVDYRLMTRQMVKAVLSMSERNR  179
            V AKR  R  + +++   +  FY++  K+S   I E   D+RLM+R++V  +  ++ERN 
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  180  FTKGIFGWVGFHTKWIAYENVERAAGQTKWSFWKLFKYSLEGIIGFSTAPLAISSILGLA  239
            F KGI++WVG +T  + Y   ER AG +K + WKL + +LEGI +FST PL + + +GL 
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLF  235

Query  240  FCGFSVLAIIYIVIKTIIWGDPTSGWPSLACIILMVGGIQLFCMGILGQYMGKTYIEVKN  299
              ++S L    ++I T++ G+P  G PSL   IL +GG+QL+ +G+LG+Y+G+ Y+E K+
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  300  RPIYL  304
            RP Y+
Sbjct  296  RPKYI  300

505) CBUD_1485 in NC_009727


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  183 bits (677),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 125/305 (41%), Positives = 207/305 (68%), Gaps = 4/305 (1%)

Query  18   ISCIVPLHNEQGNVLRFFPALRN--EIAQYTDQFEIIAIDDGSTDQTRIALSQLYQTIPE  75
            IS +VP+ NE+  +  F+ ++R+  E+  Y  + EI+ I+DGS D T   ++ L  + P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPY--EVEIVFINDGSKDATESIINALAVSDPL  60

Query  76   LKTIFLSRRFGKEKAISAGIDYVKGDATLIIDGDFQHPFSTIKEFLRRWAEGYDMVYGIR  135
            +  + ++R FGKE A+ AG+D   GDA + ID D+Q+P+  I +++ +W  G +MV + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  136  HDRKQEGWFKKTCTGLFYKFTQFFTEVPIPKNAGDFRLLDKRVVEALRACPENNRFMKGL  195
             DR  +G++K+  +  FYK+ + ++   I  N GDFRL+ + VVE ++  PE N FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  196  YAWVGFDSVGVEFEVQARQAGKTSWSFKRLFSLALHGIFSFSDVPLRFWSLLGFTISSIS  255
             +WVG ++  VE+    R AG +  +  +L +LAL+GI SFS  PLR W+ +G+ ++SIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  256  FIYALWIILDTLLFGVDLPGFATIVVAIVFFggiqllsigilgEYIGRIFTEVKQRPRYL  315
            F+Y+ W+I+DTL+FG  + G+++++V+I+F+GG+QL++IG+LGEYIGRI+ E K RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  316  IAKKH  320
            + K +
Sbjct  301  LKKGR  305

506) csbB in NC_012004


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 125/308 (41%), Positives = 205/308 (67%), Gaps = 8/308 (2%)

Query  4    LSIIVPCFNEEETIPIFFKQMQVIEHAMTQDLSFEYIFIDDGSKDKTLDILRQLHANHAN  63
            +S++VP FNEEE+IP+F+K ++ +++    ++  E +FI+DGSKD T  I+  L  +++ 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRNFGKEAGLLAGLEEAKGDYITVMDADLQDPPELIPMMYAQLQKGYDVVGTRR  123
            V  LSF+RNFGKE++L+AGL++A GD +  +D DLQDP E+IP +  + Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  INRKGEPFIRSICSKLFYYLIAKISDTEMIDGVRDFRLMTRQVLESILELGEVNRFSKGI  183
             +R  +  ++   +  FY L  KIS   + + V DFRLM+R+V+E+I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGFKTTYISYDNRERQKGKT---SWHFFDLIRYSLDGFINFSEVPLALATWVGTlsf  240
            +SWVG +T  + Y   ER  G +   +W + +L   +L+G+ +FS  PL + T +G +  
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  llsllaiifiVVRKLLFDDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRP  300
             +S+L    +++  L+F++PV G +S +  ILF+GG+QL+ +G++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  VYIVKEKK  308
             YI+K  +
Sbjct  298  KYILKKGR  305

507) LRC_01200 in NC_015975


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  183 bits (679),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 125/312 (41%), Positives = 206/312 (67%), Gaps = 10/312 (3%)

Query  1    MKILSIIVPCYYEEESLPLFYKATEEVNKKLENIKFEYWFINDGSTDGTLAEMRKLNKLN  60
            MKI S++VP + EEE++P+FYK+  E +  L     E  FINDGS D+T + +  L   +
Sbjct  1    MKI-SLVVPVFNEEEAIPVFYKTVREFQE-LKPYEVEIVFINDGSKDATESIINALAVSD  58

Query  61   PENVHYVSFSRNFGKEAALYCGLQQATGNYVTVMDADLQDPPEMLPEMIKILENEDYDCV  120
            P  V  +SF+RNFGKE+AL+ GL++A+G+ V  +D DLQDP E++P++I   +    + V
Sbjct  59   PLVVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMV  116

Query  121  GTRRTTREGEPPIRSFFARMFYKIINKISDTEIVDGARDFRVMTRQMVDAILEMSEYNRF  180
             ++R+ R  +  ++   A  FYK+ NKIS   I +   DFR+M+R++V+ I  ++E N F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  181  SKGIFSWVGFNTKYLEYKNHERVAGKTSWNFWSLFKYSIDGIVNFSRFPLDIASFIGFIS  240
             KGI+SWVG +T  +EY   ERVAG +  N W L + +++GI +FS FPL + ++IG+  
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL--  234

Query  241  ALISGCAILF---IVIRYMIHGDPTSGWASMVCIMLFIGGIQLFCLGIVGKYIGKIFTEV  297
             ++++ ++L+   ++I  ++ G+P  G +S++  +LF+GG+QL+ +G++G YIG+I+ E 
Sbjct  235  -FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  298  KHRPIYIVKEKK  309
            K RP YI+K  +
Sbjct  294  KSRPKYILKKGR  305

508) BMD_2071 in NC_014103


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  183 bits (679),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 210/302 (70%), Gaps = 0/302 (0%)

Query  5    VKYSIVVPVYNEEEVIHETYRRLTEVMHSTKEAYELLFVNDGSRDRTAEIIKEYSEQDPA  64
            +K S+VVPV+NEEE I   Y+ + E  +      E++F+NDGS+D T  II+  +  DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VVLLDFARNFGHQIAITAGMDYARGEAVVVIDADLQDPPELILEMIEKWKQGFDVVYAKR  124
            VV L F+RNFG + A+ AG+D A G+AV+ ID DLQDP E+I ++IEKW+ G ++V AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  TKRKGETYFKKQTAAMFYRILGAMTDIDIPLDTGDFRLLDRKVCNQMNSIQEKNRFVRGL  184
            + R  +  +K++TA  FY++   ++   I  + GDFRL+ R V ++++ + E+N F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  VSWVGFKQIAVEYERDERLAGESKYPLKKMLKLSMDGITSFSYKPLKLASYAGVTLSGIG  244
            +SWVG +   VEY R ER+AG SK+   K+ +L+++GITSFS  PL++ +Y G+ +++I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FIYLLVVLYLKLFTDSTITGWSSLIVIQLFFSgiiliilgmigeyigRIYDETKNRPLYI  304
            F+Y   ++   L  ++ + G +SL+V  LF++G+ LI +G++GEYIGRIY ETK+RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  305  VR  306
            ++
Sbjct  301  LK  302

509) wcaA in NC_013722


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  183 bits (679),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 131/303 (44%), Positives = 209/303 (69%), Gaps = 1/303 (0%)

Query  16   RLTVVVTAFNEAQTLPLLQPRILAALDGLEGLQGRVLYVDDGSRDATWDTILALTESDPR  75
            ++++VV  FNE +++P++  + +  ++ L   +  +++++DGS+DAT   I AL+ SDP 
Sbjct  2    KISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  76   IGALRLSRNFGKELALTAGLDFVERGAAVLLDADGQDPPELIGQFVAHWRAGYDDIYGTR  135
            + +L ++RNFGKE AL AGLD    +A + +D D QDP E+I +++  W+AG + + + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  136  ILREGESWLKRGTAALFYRVIGRLSKTPIPADTGDFrllspralaalrqlrerhrFMKGL  195
              R  +++LKR TA  FY++  ++S   I  + GDFRL+S   +  ++ L ER+ FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  196  FGWVGFRRLAVPYRRAPRLAGRSKFSLWRLWNFALDGITGFSTAPLRVATYLGLvtavaa  255
            ++WVG +   V Y RA R+AG SKF+ W+LWN+AL+GIT+FST PLRV TY+GL  A  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  256  faygavvvCKAALWGDRVAGWPTMMAVILFLGGVQLIALGLIGEYLGRLYEESKQRPLYL  315
            F YGA ++  + + G+ V G P+++  ILFLGGVQLI++G++GEY+GR+Y E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  316  VDT  318
            +  
Sbjct  301  LKK  303

510) dpm1 in NC_020286


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 126/303 (42%), Positives = 202/303 (67%), Gaps = 10/303 (3%)

Query  24   SLIVPIYNEEDNIPVLYERLKAVMDQLAS--TELVLINDGSGDRSLEMIRALHDQDKRVC  81
            SL+VP++NEE+ IPV+Y  ++   ++L +   E+V+INDGS D +  +I AL   D  V 
Sbjct  4    SLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  82   YLSFARNFGHQVAVTAGLNFARGQAVIILDADLQDPPELVPQLVERWQAGYSVVYAQRVK  141
             LSF+RNFG + A+ AGL+ A G+AVI +D DLQDP E++P+L+E+WQAG  +V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  142  RRQESWFKRLTAYGFYRLLQRLADVRIPADTGDFCLMDRQVVDLLNTMPERNRYIRGLRA  201
            R  ++++KR TA  FY+L ++++  +I  + GDF LM R+VV+ ++ +PERN +++G+ +
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  202  WVGFPQTGVKFERDPRHAGEVKYTFRKSLRLAINSLVSFSIVPlrlatylgllaallaia  261
            WVG     V + R  R AG  K+  +K   LA++++ SFS  P      +    +L+  +
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP----LRVWTYIGLFVAS  238

Query  262  mmilvlyWRLSET---NSPLDGFATVVIANLFFGAVQLICIGILGEYIGRIYDEVKGRPL  318
            + +L   W + +T    +P+ G+++++++ LF+G+VQLI IG+LGEYIGRIY E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  319  YTL  321
            Y L
Sbjct  299  YIL  301

511) dpm1 in NC_000911


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 126/303 (42%), Positives = 202/303 (67%), Gaps = 10/303 (3%)

Query  24   SLIVPIYNEEDNIPVLYERLKAVMDQLAS--TELVLINDGSGDRSLEMIRALHDQDKRVC  81
            SL+VP++NEE+ IPV+Y  ++   ++L +   E+V+INDGS D +  +I AL   D  V 
Sbjct  4    SLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  82   YLSFARNFGHQVAVTAGLNFARGQAVIILDADLQDPPELVPQLVERWQAGYSVVYAQRVK  141
             LSF+RNFG + A+ AGL+ A G+AVI +D DLQDP E++P+L+E+WQAG  +V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  142  RRQESWFKRLTAYGFYRLLQRLADVRIPADTGDFCLMDRQVVDLLNTMPERNRYIRGLRA  201
            R  ++++KR TA  FY+L ++++  +I  + GDF LM R+VV+ ++ +PERN +++G+ +
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  202  WVGFPQTGVKFERDPRHAGEVKYTFRKSLRLAINSLVSFSIVPlrlatylgllaallaia  261
            WVG     V + R  R AG  K+  +K   LA++++ SFS  P      +    +L+  +
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP----LRVWTYIGLFVAS  238

Query  262  mmilvlyWRLSET---NSPLDGFATVVIANLFFGAVQLICIGILGEYIGRIYDEVKGRPL  318
            + +L   W + +T    +P+ G+++++++ LF+G+VQLI IG+LGEYIGRIY E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  319  YTL  321
            Y L
Sbjct  299  YIL  301

512) BMQ_2115 in NC_014019


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (676),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 133/302 (45%), Positives = 209/302 (70%), Gaps = 0/302 (0%)

Query  5    VKYSIVVPVYNEEEVIHETYRRLTEVMRSTKEAYELLFVNDGSKDRTAEIIKEYSEQDPA  64
            +K S+VVPV+NEEE I   Y+ + E         E++F+NDGSKD T  II+  +  DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   VVLLDFARNFGHQIAITAGMDYARGEAVVVIDADLQDPPELILEMIEKWKQGFDVVYAKR  124
            VV L F+RNFG + A+ AG+D A G+AV+ ID DLQDP E+I ++IEKW+ G ++V AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  125  TKRKGETYFKKQTAAMFYRFLRAMTDIDIPLDTGDFRLLDRKVCNQMNSIQEKNRFVRGL  184
            + R  +  +K++TA  FY++   ++   I  + GDFRL+ R V ++++ + E+N F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  185  VSWVGFKQIAVEYERDERLAGESKYPLKKMLKLSMDGITSFSYKPLKLASYAGVTLSGIG  244
            +SWVG +   VEY R ER+AG SK+   K+ +L+++GITSFS  PL++ +Y G+ +++I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  245  FIYLLVVMYLKLFTDSTITGWSSLIVIQLFFSgiiliilgmigeyigRIYDETKNRPLYI  304
            F+Y   ++   L  ++ + G +SL+V  LF++G+ LI +G++GEYIGRIY ETK+RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  305  VR  306
            ++
Sbjct  301  LK  302

513) Spith_1837 in NC_017583


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 133/299 (45%), Positives = 203/299 (68%), Gaps = 0/299 (0%)

Query  2    ISIIIPVYNEEEVLPALYERLTRVMKGTGEEYELVFVDDGSTDRTYQILKNLHEKDPRCK  61
            IS+++PV+NEEE +P +Y  +         E E+VF++DGS D T  I++ L   DP   
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   VIHFSRNFGHQIAITAGMDYARGDAVIIIDADLQDPPELIPQMLEKWRAGTQIVHARRVK  121
             + F+RNFG + A+ AG+D A GDAVI ID DLQDP E+IP+++EKW+AG+++V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  122  RKGEGLFKRATAALFYRILKALTDVEIPVDVGDFRLMDRKVVDSLKGMRERNRFVRGLVS  181
            R  +G +KR TA  FY++ + ++   I  +VGDFRLM R VV+++K + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  182  WTGFRQDEVTYVRDPRYAGTTKYPLGKMIRFALNGITSFSDKPlkvasllgsllslagfl  241
            W G + D V YVR  R AG +K+   K+  +AL+GITSFS  PL+V + +G +++  +FL
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  242  yllyvlylrlfTDQVVQGWASIVVLILVFNGFTLLSLGILGEYVGRIYDEVKQRPLYIV  300
            Y   ++   L  ++ V+G +S++V IL + G  L+++G+LGEY+GRIY E K RP YI+
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

514) SCI_1201 in NC_022238


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 136/306 (45%), Positives = 200/306 (66%), Gaps = 6/306 (1%)

Query  1    MTISIIIPCFNEEESLPLFYAEMEKIKSQINDHFEYIFVNDGSKDRTLSILRELSQKNNS  60
            M IS+++P FNEEE++P+FY  +  ++     + E +F+NDGSKD T SI+  L+  +  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VRYLSFSRNFGKEAALYAGLKYATGDLVTVMDADLQDPPALLIQMKNMLDENAELDCVGT  120
            V  LSF+RNFGKE+AL+AGL  A+GD V  +D DLQDP  ++ ++ +  +  AE+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRITREGEPLIRSFFAKMFYKLINKISQVEMVDGARDFRLMRRQMVDAVLEVSEYNRFSK  180
            +R  R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ +  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFKTKYLEYKNVERVAGKTSWNFWQLLNYSLEGIINFSDAPLTIAVWG--Giva  238
            GI++WVG +T  +EY   ERVAG +  N W+L N +LEGI +FS  PL   VW   G+  
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFV  236

Query  239  cllaffliiiviirtliFGDPTAGWPSMVSIILFLGGFQLLTIGILGKYIGKIFMETKKR  298
              ++F+    +II TL+FG+P  G PS++  ILFLGG QL+ IG+LG YIG+I++ETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYVIK  304
            P Y++K
Sbjct  297  PKYILK  302

515) SCRE_1142 in NC_022236


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 136/306 (45%), Positives = 200/306 (66%), Gaps = 6/306 (1%)

Query  1    MTISIIIPCFNEEESLPLFYAEMEKIKSQINDHFEYIFVNDGSKDRTLSILRELSQKNNS  60
            M IS+++P FNEEE++P+FY  +  ++     + E +F+NDGSKD T SI+  L+  +  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VRYLSFSRNFGKEAALYAGLKYATGDLVTVMDADLQDPPALLIQMKNMLDENAELDCVGT  120
            V  LSF+RNFGKE+AL+AGL  A+GD V  +D DLQDP  ++ ++ +  +  AE+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRITREGEPLIRSFFAKMFYKLINKISQVEMVDGARDFRLMRRQMVDAVLEVSEYNRFSK  180
            +R  R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ +  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFKTKYLEYKNVERVAGKTSWNFWQLLNYSLEGIINFSDAPLTIAVWG--Giva  238
            GI++WVG +T  +EY   ERVAG +  N W+L N +LEGI +FS  PL   VW   G+  
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFV  236

Query  239  cllaffliiiviirtliFGDPTAGWPSMVSIILFLGGFQLLTIGILGKYIGKIFMETKKR  298
              ++F+    +II TL+FG+P  G PS++  ILFLGG QL+ IG+LG YIG+I++ETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYVIK  304
            P Y++K
Sbjct  297  PKYILK  302

516) SCR2_1142 in NC_022245


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 136/306 (45%), Positives = 200/306 (66%), Gaps = 6/306 (1%)

Query  1    MTISIIIPCFNEEESLPLFYAEMEKIKSQINDHFEYIFVNDGSKDRTLSILRELSQKNNS  60
            M IS+++P FNEEE++P+FY  +  ++     + E +F+NDGSKD T SI+  L+  +  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VRYLSFSRNFGKEAALYAGLKYATGDLVTVMDADLQDPPALLIQMKNMLDENAELDCVGT  120
            V  LSF+RNFGKE+AL+AGL  A+GD V  +D DLQDP  ++ ++ +  +  AE+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRITREGEPLIRSFFAKMFYKLINKISQVEMVDGARDFRLMRRQMVDAVLEVSEYNRFSK  180
            +R  R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ +  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFKTKYLEYKNVERVAGKTSWNFWQLLNYSLEGIINFSDAPLTIAVWG--Giva  238
            GI++WVG +T  +EY   ERVAG +  N W+L N +LEGI +FS  PL   VW   G+  
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFV  236

Query  239  cllaffliiiviirtliFGDPTAGWPSMVSIILFLGGFQLLTIGILGKYIGKIFMETKKR  298
              ++F+    +II TL+FG+P  G PS++  ILFLGG QL+ IG+LG YIG+I++ETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYVIK  304
            P Y++K
Sbjct  297  PKYILK  302

517) ykcC in NC_017138


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (676),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 208/302 (69%), Gaps = 0/302 (0%)

Query  7    IKYSIVVPVYNEEEVIHETYRRLTEVMRSTKEAYELLFVNDGSRDRTAEIIKEYSEQDPA  66
            +K S+VVPV+NEEE I   Y+ + E         E++F+NDGS+D T  II+  +  DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  67   VVLLDFARNFGHQIAITAGMDYARGEAVVVIDADLQDPPELILEMIEKWEQGFDVVYAKR  126
            VV L F+RNFG + A+ AG+D A G+AV+ ID DLQDP E+I ++IEKW+ G ++V AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  127  TKRKGETYFKKQTAAMFYRFLRAMTDIDIPLDTGDFRLLDRKVCNQMNSIQEKNRFVRGL  186
            + R  +  +K++TA  FY++   ++   I  + GDFRL+ R V ++++ + E+N F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  187  VSWVGFKQIAVEYERDERLAGESKYPLKKMLKLSMDGITSFSYKPLKLASYAGVTLSGIG  246
            +SWVG +   VEY R ER+AG SK+   K+ +L+++GITSFS  PL++ +Y G+ +++I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  247  FIYLLVVLYLKLFTESTITGWSSLIVIQLFFSgiiliilgmigeyigRIYDETKNRPLYI  306
            F+Y   ++   L   + + G +SL+V  LF++G+ LI +G++GEYIGRIY ETK+RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  307  VR  308
            ++
Sbjct  301  LK  302

518) dpm1 in NC_017038


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 125/302 (42%), Positives = 200/302 (67%), Gaps = 8/302 (2%)

Query  3    SLIVPIYNEEDNIPVLYERLKAVMDQLA-STELVLINDGSGDRSLEMIRALHDQDKRVCY  61
            SL+VP++NEE+ IPV+Y  ++   +  +   E+V+INDGS D +  +I AL   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  62   LSFARNFGHQVAVTAGLNFARGQAVIILDADLQDPPELVPQLVERWQAGYSVVYAQRVKR  121
            LSF+RNFG + A+ AGL+ A G+AVI +D DLQDP E++P+L+E+WQAG  +V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  122  RQESWFKRLTAYGFYRLLQRLADVRIPADTGDFCLMDRQVVDLLNTMPERNRYIRGLRAW  181
              ++++KR TA  FY+L ++++  +I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  182  VGFPQTGVKFERDPRHAGEVKYTFRKSLRLAINSLVSFSIVPlrlatylgllaallaiam  241
            VG     V + R  R AG  K+  +K   LA++++ SFS  P      +    +L+  ++
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP----LRVWTYIGLFVASI  239

Query  242  milvlyWRLSET---NSPLDGFATVVIANLFFGAVQLICIGILGEYIGRIYDEVKGRPLY  298
             +L   W + +T    +P+ G+++++++ LF+G+VQLI IG+LGEYIGRIY E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  TL  300
             L
Sbjct  300  IL  301

519) dpm1 in NC_017052


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 125/302 (42%), Positives = 200/302 (67%), Gaps = 8/302 (2%)

Query  3    SLIVPIYNEEDNIPVLYERLKAVMDQLA-STELVLINDGSGDRSLEMIRALHDQDKRVCY  61
            SL+VP++NEE+ IPV+Y  ++   +  +   E+V+INDGS D +  +I AL   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  62   LSFARNFGHQVAVTAGLNFARGQAVIILDADLQDPPELVPQLVERWQAGYSVVYAQRVKR  121
            LSF+RNFG + A+ AGL+ A G+AVI +D DLQDP E++P+L+E+WQAG  +V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  122  RQESWFKRLTAYGFYRLLQRLADVRIPADTGDFCLMDRQVVDLLNTMPERNRYIRGLRAW  181
              ++++KR TA  FY+L ++++  +I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  182  VGFPQTGVKFERDPRHAGEVKYTFRKSLRLAINSLVSFSIVPlrlatylgllaallaiam  241
            VG     V + R  R AG  K+  +K   LA++++ SFS  P      +    +L+  ++
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP----LRVWTYIGLFVASI  239

Query  242  milvlyWRLSET---NSPLDGFATVVIANLFFGAVQLICIGILGEYIGRIYDEVKGRPLY  298
             +L   W + +T    +P+ G+++++++ LF+G+VQLI IG+LGEYIGRIY E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  TL  300
             L
Sbjct  300  IL  301

520) dpm1 in NC_017039


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 125/302 (42%), Positives = 200/302 (67%), Gaps = 8/302 (2%)

Query  3    SLIVPIYNEEDNIPVLYERLKAVMDQLA-STELVLINDGSGDRSLEMIRALHDQDKRVCY  61
            SL+VP++NEE+ IPV+Y  ++   +  +   E+V+INDGS D +  +I AL   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  62   LSFARNFGHQVAVTAGLNFARGQAVIILDADLQDPPELVPQLVERWQAGYSVVYAQRVKR  121
            LSF+RNFG + A+ AGL+ A G+AVI +D DLQDP E++P+L+E+WQAG  +V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  122  RQESWFKRLTAYGFYRLLQRLADVRIPADTGDFCLMDRQVVDLLNTMPERNRYIRGLRAW  181
              ++++KR TA  FY+L ++++  +I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  182  VGFPQTGVKFERDPRHAGEVKYTFRKSLRLAINSLVSFSIVPlrlatylgllaallaiam  241
            VG     V + R  R AG  K+  +K   LA++++ SFS  P      +    +L+  ++
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP----LRVWTYIGLFVASI  239

Query  242  milvlyWRLSET---NSPLDGFATVVIANLFFGAVQLICIGILGEYIGRIYDEVKGRPLY  298
             +L   W + +T    +P+ G+++++++ LF+G+VQLI IG+LGEYIGRIY E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  TL  300
             L
Sbjct  300  IL  301

521) dpm1 in NC_017277


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 125/302 (42%), Positives = 200/302 (67%), Gaps = 8/302 (2%)

Query  3    SLIVPIYNEEDNIPVLYERLKAVMDQLA-STELVLINDGSGDRSLEMIRALHDQDKRVCY  61
            SL+VP++NEE+ IPV+Y  ++   +  +   E+V+INDGS D +  +I AL   D  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  62   LSFARNFGHQVAVTAGLNFARGQAVIILDADLQDPPELVPQLVERWQAGYSVVYAQRVKR  121
            LSF+RNFG + A+ AGL+ A G+AVI +D DLQDP E++P+L+E+WQAG  +V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  122  RQESWFKRLTAYGFYRLLQRLADVRIPADTGDFCLMDRQVVDLLNTMPERNRYIRGLRAW  181
              ++++KR TA  FY+L ++++  +I  + GDF LM R+VV+ ++ +PERN +++G+ +W
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  182  VGFPQTGVKFERDPRHAGEVKYTFRKSLRLAINSLVSFSIVPlrlatylgllaallaiam  241
            VG     V + R  R AG  K+  +K   LA++++ SFS  P      +    +L+  ++
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP----LRVWTYIGLFVASI  239

Query  242  milvlyWRLSET---NSPLDGFATVVIANLFFGAVQLICIGILGEYIGRIYDEVKGRPLY  298
             +L   W + +T    +P+ G+++++++ LF+G+VQLI IG+LGEYIGRIY E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  TL  300
             L
Sbjct  300  IL  301

522) CbuG_1420 in NC_011527


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 206/305 (68%), Gaps = 4/305 (1%)

Query  18   ISCIVPLHNEQGNVLRFFPALRN--EIAQYTDQFEIIAIDDGSTDQTRIALSQLYQTIPE  75
            IS +VP+ NE+  +  F+ ++R+  E+  Y  + EI+ I+DGS D T   ++ L  + P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPY--EVEIVFINDGSKDATESIINALAVSDPL  60

Query  76   LKTIFLSRRFGKEKAISAGIDYVKGDVTLIIDGDFQHPFSTIKEFLRRWAEGYDMVYGIR  135
            +  + ++R FGKE A+ AG+D   GD  + ID D+Q+P+  I +++ +W  G +MV + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  136  HDRKQEGWFKKTCTGLFYKFTQFFTEVPIPKNAGDFRLLDKRVVEALRACPENNRFMKGL  195
             DR  +G++K+  +  FYK+ + ++   I  N GDFRL+ + VVE ++  PE N FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  196  YAWVGFDSVGVEFEVQARQAGKTSWSFKRLFSLALHGIFSFSDVPLRFWSLLGFTISSIS  255
             +WVG ++  VE+    R AG +  +  +L +LAL+GI SFS  PLR W+ +G+ ++SIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  256  FIYALWIILDTLLFGVDLPGFATIVVAIVFFggiqllsigilgEYIGRIFTEVKQRPRYL  315
            F+Y+ W+I+DTL+FG  + G+++++V+I+F+GG+QL++IG+LGEYIGRI+ E K RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  316  IAKKH  320
            + K +
Sbjct  301  LKKGR  305

523) CbuK_1260 in NC_011528


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 206/305 (68%), Gaps = 4/305 (1%)

Query  18   ISCIVPLHNEQGNVLRFFPALRN--EIAQYTDQFEIIAIDDGSTDQTRIALSQLYQTIPE  75
            IS +VP+ NE+  +  F+ ++R+  E+  Y  + EI+ I+DGS D T   ++ L  + P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPY--EVEIVFINDGSKDATESIINALAVSDPL  60

Query  76   LKTIFLSRRFGKEKAISAGIDYVKGDVTLIIDGDFQHPFSTIKEFLRRWAEGYDMVYGIR  135
            +  + ++R FGKE A+ AG+D   GD  + ID D+Q+P+  I +++ +W  G +MV + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  136  HDRKQEGWFKKTCTGLFYKFTQFFTEVPIPKNAGDFRLLDKRVVEALRACPENNRFMKGL  195
             DR  +G++K+  +  FYK+ + ++   I  N GDFRL+ + VVE ++  PE N FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  196  YAWVGFDSVGVEFEVQARQAGKTSWSFKRLFSLALHGIFSFSDVPLRFWSLLGFTISSIS  255
             +WVG ++  VE+    R AG +  +  +L +LAL+GI SFS  PLR W+ +G+ ++SIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  256  FIYALWIILDTLLFGVDLPGFATIVVAIVFFggiqllsigilgEYIGRIFTEVKQRPRYL  315
            F+Y+ W+I+DTL+FG  + G+++++V+I+F+GG+QL++IG+LGEYIGRI+ E K RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  316  IAKKH  320
            + K +
Sbjct  301  LKKGR  305

524) COXBURSA331_A0692 in NC_010117


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 206/305 (68%), Gaps = 4/305 (1%)

Query  18   ISCIVPLHNEQGNVLRFFPALRN--EIAQYTDQFEIIAIDDGSTDQTRIALSQLYQTIPE  75
            IS +VP+ NE+  +  F+ ++R+  E+  Y  + EI+ I+DGS D T   ++ L  + P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPY--EVEIVFINDGSKDATESIINALAVSDPL  60

Query  76   LKTIFLSRRFGKEKAISAGIDYVKGDVTLIIDGDFQHPFSTIKEFLRRWAEGYDMVYGIR  135
            +  + ++R FGKE A+ AG+D   GD  + ID D+Q+P+  I +++ +W  G +MV + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  136  HDRKQEGWFKKTCTGLFYKFTQFFTEVPIPKNAGDFRLLDKRVVEALRACPENNRFMKGL  195
             DR  +G++K+  +  FYK+ + ++   I  N GDFRL+ + VVE ++  PE N FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  196  YAWVGFDSVGVEFEVQARQAGKTSWSFKRLFSLALHGIFSFSDVPLRFWSLLGFTISSIS  255
             +WVG ++  VE+    R AG +  +  +L +LAL+GI SFS  PLR W+ +G+ ++SIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  256  FIYALWIILDTLLFGVDLPGFATIVVAIVFFggiqllsigilgEYIGRIFTEVKQRPRYL  315
            F+Y+ W+I+DTL+FG  + G+++++V+I+F+GG+QL++IG+LGEYIGRI+ E K RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  316  IAKKH  320
            + K +
Sbjct  301  LKKGR  305

525) CBU_0578 in NC_002971


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 206/305 (68%), Gaps = 4/305 (1%)

Query  18   ISCIVPLHNEQGNVLRFFPALRN--EIAQYTDQFEIIAIDDGSTDQTRIALSQLYQTIPE  75
            IS +VP+ NE+  +  F+ ++R+  E+  Y  + EI+ I+DGS D T   ++ L  + P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPY--EVEIVFINDGSKDATESIINALAVSDPL  60

Query  76   LKTIFLSRRFGKEKAISAGIDYVKGDVTLIIDGDFQHPFSTIKEFLRRWAEGYDMVYGIR  135
            +  + ++R FGKE A+ AG+D   GD  + ID D+Q+P+  I +++ +W  G +MV + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  136  HDRKQEGWFKKTCTGLFYKFTQFFTEVPIPKNAGDFRLLDKRVVEALRACPENNRFMKGL  195
             DR  +G++K+  +  FYK+ + ++   I  N GDFRL+ + VVE ++  PE N FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  196  YAWVGFDSVGVEFEVQARQAGKTSWSFKRLFSLALHGIFSFSDVPLRFWSLLGFTISSIS  255
             +WVG ++  VE+    R AG +  +  +L +LAL+GI SFS  PLR W+ +G+ ++SIS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  256  FIYALWIILDTLLFGVDLPGFATIVVAIVFFggiqllsigilgEYIGRIFTEVKQRPRYL  315
            F+Y+ W+I+DTL+FG  + G+++++V+I+F+GG+QL++IG+LGEYIGRI+ E K RP+Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  316  IAKKH  320
            + K +
Sbjct  301  LKKGR  305

526) AZL_023000 in NC_013854


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (674),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 133/307 (44%), Positives = 213/307 (70%), Gaps = 8/307 (2%)

Query  35   LSVVIPFYNEGPNIDALFARLVPVLDGL-GMDWEVVCVNDGSRDDTIDRLLDVHDREARV  93
            +S+V+P +NE   I ++F + V  ++ L   + E+V +NDGS+D T   +  +   ++ V
Sbjct  3    ISLVVPVFNEEEAI-PVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  94   KVVDLSRNFGKELALSAGLSHTTGDAVVPMDADLQHPPELLPEFIAKWREGFDVVVAVRH  153
              + ++RNFGKE AL AGL H++GDAV+P+D DLQ+P E++P++I KW+ G ++V+A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  154  ARVGQSLKHRLFARLFYWVFDHLSEIKLPREVGDFRLMDRRVVEVINRMPERTRFMKGIF  213
             R  ++   R  A  FY + + +S  K+  +VGDFRLM R VVE I+ +PER  FMKGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  214  AWVGFRQAAIPYEQGERAGGDTK---WGFVKLLRLSFDGLTAFSTFPLRVWSLVGMAVSG  270
            +WVG +   + Y ++ER +G +K   W   KL  L+++G+T+FSTFPLRVW+ +G+ V++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGW---KLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  271  VAFVYILIRLIRTLVHGIDVPGYESLLVAVlflggiqlitlgiigDYLGRVFAEVKGRPL  330
            ++F+Y    +I TLV G  V GY SLLV++LFLGG+QLI +G++G+Y+GR++ E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  331  FIVRSAH  337
            +I++ ++
Sbjct  299  YILKKGR  305

527) LMRG_01697 in NC_017544


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

528) lmo2550 in NC_003210


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

529) LMLG_2763 in NC_017547


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

530) LMKG_02479 in NC_017546


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

531) LMOG_02308 in NC_017545


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

532) BN418_3017 in NC_020557


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

533) BN419_3030 in NC_020558


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

534) LMOSLCC2755_2556 in NC_018587


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

535) LMOSLCC2372_2614 in NC_018588


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

536) LMOSLCC2479_2613 in NC_018589


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

537) LMOSLCC2540_2583 in NC_018586


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

538) LMOSLCC5850_2554 in NC_018592


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

539) LMOSLCC7179_2462 in NC_018593


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

540) M642_10965 in NC_021823


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

541) M639_04235 in NC_021837


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

542) M637_00945 in NC_021824


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

543) M643_08235 in NC_021826


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

544) LM5923_2694 in NC_013768


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 131/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKASSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ ++ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

545) LM5578_2745 in NC_013766


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 131/301 (44%), Positives = 209/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKASSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ ++ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

546) Mfla_1377 in NC_007947


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 132/306 (44%), Positives = 209/306 (69%), Gaps = 13/306 (4%)

Query  11   HISVIVPAFNESSAITSTVENIANQLATLSP-HWDIVVIDDGSRDKTADIVRGLPAYLRT  69
             IS++VP FNE  AI      +  ++  L P + +IV I+DGS+D T  I+ +L+  +  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALA--VSD  58

Query  70   TLV---RFSRNFGKEYAITAGLEYASGDIVICMDADGQHSPALISEMLEKWRAGYDMVYA  126
             LV    F+RNFGKE A+ AGL+ ASGD VI +D D Q++  +I++++EKW+AG +MV A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  127  VRQNRHIESGFKRWGSKLFYEIMTLGERITIPR---DAGDFRLMNRNVVNALRKLPERNR  183
             R +R  ++ +KR  +  FY    L ++I+ P+   + GDFRLM+R+VV+ ++ LPERN 
Sbjct  119  KRSDRSTDGRLKRKTAEWFY---KLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  184  FMKGMYAWVGYKSIGIPYTPLPRSHGVSTFSRLKLIQLAWTGITSFSVIPlrlasavggl  243
            FMKG+ +WVG ++  + Y    R  G+S F+  KL +LA  GITSFS +PLR+ + +G +
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLF  235

Query  244  lallaFIYGIWVILEKMFFHESIPGWPTVVASLMFFSGVQLLFIGILGEYIARIYDEVKG  303
            +A ++F+YG W+I++ + F +++ G P+++ S++F++GVQL+ IG+LGEYI+RIY E K+
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  304  RPPYIV  309
            RP YI+
Sbjct  296  RPKYIL  301

547) Acear_2145 in NC_014378


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (672),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 115/273 (43%), Positives = 183/273 (68%), Gaps = 2/273 (0%)

Query  39   NVEVIFVNDGSSDKTQEILQDVYTNNKSFVRVIDLSRNFGKESAMLAGLKYSKGDLITVM  98
            +VE++F+NDGS D T+ I++ + + + ++V  + ++RNFGKE+A++AGL  + GD +  +
Sbjct  33   EVEIVFINDGSKDATESIINAL-AVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPI  91

Query  99   DADLQDPPTLLQDMIYAICEEGYDAVATRRHTRKGEPLMRSFFARQFYNIINKISDIDIV  158
            D DLQDP  ++ ++I    + G + V ++R  R  +  ++   A  FY++ NKIS   I 
Sbjct  92   DVDLQDPIEVIPHLI-EKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIE  150

Query  159  EGARDYRMMTDQVAEALLNMKEYNRFSKGLYEWIGFNTKYIEFENVERVAGNTSWSFWKL  218
            E   D+R+M+ +V E +  + E N F KG+  W+G +T  +E+   ERVAG +  + WKL
Sbjct  151  ENVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKL  210

Query  219  FKYAVEGIVSFTTMPLRIASLLGAVVSGFSFIYMMIIIIKTLVFGEVVRGYPSLMSVILA  278
             + A+EGI SF+T PLR+ + +G  V+++SF+Y   +II TLVFG+ VRGYPSL+  IL 
Sbjct  211  WNLALEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILF  270

Query  279  LSGVQLLCMGILGEYLARTYTEVKDRPRYIVKS  311
            L+GVQL+ +G+LGEY++R Y E K RP+YI+K 
Sbjct  271  LGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

548) LEUM_1401 in NC_008531


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (672),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 129/306 (43%), Positives = 212/306 (70%), Gaps = 7/306 (2%)

Query  14   LSLVVPVHNEEATINIFYNTIEKLKPNLTADVHYHFIDDGSTDSTLSILRDLSKINDNVH  73
            +SLVVPV NEE +I +FY+T+  ++     +V+  FI+DGS D+T SI+  L+  +  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  74   YISFSRNFGKEAGLYAGLQQADGDYVAVMDVDLQDPPELLPEMLREVQNGEYDAVGTRRA  133
             +SF+RNFGKE++L+AGL++A GD V  +DVDLQDP E++P+++   Q G  + V ++R+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRS  121

Query  134  NRNGEAKIRSWFSEQFYTWMNKISQTHLVDGARDYRVMTRQMVDAILSLSENQRFSKGIF  193
            +R+ +++++   +E FY   NKIS   + +   D+R+M+R++V+ I  L+E + F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  194  TWVGFNTKYIPFENRERVAGNT---SWSFWSLTKYAIEGVVSFSTVPLTVITVLGllsfa  250
            +WVG +T  + +   ERVAG +   +W +W+L   A+EG+ SFST PL V T +GL+  +
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVAS  238

Query  251  lsllsaafIVIRALVNNNSVAGWPSMVTIVLFIGGIQLLSLGVIGRYMAAIFLETKKRPI  310
            +S+L +A ++I +LV  N+V G PS++  +LF+GG+QL+++GV+G Y++ I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  311  FIKKEE  316
            +I K  
Sbjct  299  YILKKG  304

549) MI1_06170 in NC_016805


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (672),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 129/306 (43%), Positives = 212/306 (70%), Gaps = 7/306 (2%)

Query  14   LSLVVPVHNEEATINIFYNTIEKLKPNLTADVHYHFIDDGSTDSTLSILRDLSKINDNVH  73
            +SLVVPV NEE +I +FY+T+  ++     +V+  FI+DGS D+T SI+  L+  +  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  74   YISFSRNFGKEAGLYAGLQQADGDYVAVMDVDLQDPPELLPEMLREVQNGEYDAVGTRRA  133
             +SF+RNFGKE++L+AGL++A GD V  +DVDLQDP E++P+++   Q G  + V ++R+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRS  121

Query  134  NRNGEAKIRSWFSEQFYTWMNKISQTHLVDGARDYRVMTRQMVDAILSLSENQRFSKGIF  193
            +R+ +++++   +E FY   NKIS   + +   D+R+M+R++V+ I  L+E + F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  194  TWVGFNTKYIPFENRERVAGNT---SWSFWSLTKYAIEGVVSFSTVPLTVITVLGllsfa  250
            +WVG +T  + +   ERVAG +   +W +W+L   A+EG+ SFST PL V T +GL+  +
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVAS  238

Query  251  lsllsaafIVIRALVNNNSVAGWPSMVTIVLFIGGIQLLSLGVIGRYMAAIFLETKKRPI  310
            +S+L +A ++I +LV  N+V G PS++  +LF+GG+QL+++GV+G Y++ I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  311  FIKKEE  316
            +I K  
Sbjct  299  YILKKG  304

550) MELS_1190 in NC_015873


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 120/298 (41%), Positives = 196/298 (66%), Gaps = 3/298 (1%)

Query  1    MSIVVPVYNEQPNIEKFYEEATKAAATLDMDYEIIFVDDGSKDATPLILSRLTQQDGHVR  60
            +S+VVPV+NE+  I  FY            + EI+F++DGSKDAT  I++ L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  61   AFILARNFGHQLAITCGMDHAIGDAVITMDGDLQHPPSMIPELVRKWREGNDVVQTIRES  120
            ++ ++RNFG + A+  G+DHA GDAVI +D DLQ+P  +IP+L+ KW+ G ++V + R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  121  TDDAGFLKRITSKWYYRILNTVSPVHITPGGSDFRLIDKRVLETFKQFREHDRFIRGMIG  180
                G LKR T+ W+Y++ N +S   I    +DFRL+ + V+E +K + E++ F++G+++
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  181  DIGYTQTFIHFVAPRRYAGKSKFSVRKMLHFALDGIMAYSKIPLRVSFYVGMlsgllsll  240
             +G     +++V + R AG SKF+ +K+ ++AL+GI ++S +PLRV  Y+G++ + +S+L
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  241  lilHVIYCNIV-GEAVQGWTTTMIVDCLF-SGFQLIFIGVIGEYIGRIFEEVKHRPLY  296
                +I   +V G++V+G   +++V  LF +G QLI IGV+GEYIGRI+ E K RP Y
Sbjct  243  YGAWMIIDTLVFGNPVRG-YPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

551) L336_0514 in NC_021219


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 132/301 (44%), Positives = 215/301 (72%), Gaps = 3/301 (0%)

Query  5    ITILVPAYNEEEVLPLLMKRLDSLTGQLPNYSWELLFINDGSKDKTDEMLRSYAESDSRI  64
            I+++VP +NEEE +P++ K +  +  +L  Y  E++FINDGSKD T+ ++ + A SD+ +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  65   SYVNFSRNFGKEAALIAGFDYAKGDAVVNIDADLQDPPELIPEMIRYWEEGYDDVYAKRR  124
              ++F+RNFGKE+AL+AG+D A GDAV+ ID DLQDP E+IP++I  W+ G + V AKR 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  125  SRAGETWFKKFSSRTYYRILQSSTLVPLQVDTGDFRLLSKRAVEAMKQFRESERYTKGMF  184
             R+ + ++K+ ++  +Y++ +  +   ++ + GDFRL+S+  VE +K + E + + KG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  185  SWIGFKKKELLYDRDPRAAGMAKQNYRKLINLAIDGITSLTTAPLRISTYVGAFTSFVAF  244
            SW+G +   + Y R  R AG++K N +KL NLA++GITS++T PLR+ TY+G F + ++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  245  VYIVYLLVRPL-FGVPTVPGYASTLAVilflggiqllslgiigEYVGRIFNETKRRPLYF  303
            +Y   +++  L FG P V GY+S L  ILFLGG+QL+++G++GEY+GRI+ ETK RP Y+
Sbjct  242  LYGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

552) SAIN_0665 in NC_022244


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (670),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 131/306 (43%), Positives = 202/306 (67%), Gaps = 6/306 (1%)

Query  1    MTISVIVPCYNEEESLPLFYAEMEKIKPRLHDNLEYIFVNDGSQDRTLEVLHELNMMDPN  60
            M IS++VP +NEEE++P+FY  +  ++     ++E +F+NDGS+D T  +++ L + DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   AHFISFSRNFGKEAALYAGLQHATGKLVTVMDADLQDPPALLIQMKNMLDENAELDCVGT  120
               +SF+RNFGKE+AL+AGL+HA+G  V  +D DLQDP  ++ ++ +  +  AE+  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  121  RRITREGEPLIRSFFAKMFYKLINKISQVEMVDGARDFRLMRRQMVDAVLEVSEYNRFSK  180
            +R  R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ +  ++E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  181  GIFAWVGFKTKYLEYKNVERVAGKTSWNFWQLLNYSLEGIINFSDASLTIAFWG--Giva  238
            GI++WVG +T  +EY   ERVAG +  N W+L N +LEGI +FS  +L +  W   G+  
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIGLFV  236

Query  239  cllaffliiiviirtliFGDPTAGWPSMVSIILFLGGFQLLTIGILGKYIGKIFMETKKR  298
              ++F+    +II TL+FG+P  G PS++  ILFLGG QL+ IG+LG YIG+I++ETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PIYVVK  304
            P Y++K
Sbjct  297  PKYILK  302

553) S23_61560 in NC_017082


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (671),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 121/301 (41%), Positives = 203/301 (68%), Gaps = 5/301 (1%)

Query  23   SIVVPLYNEAAGLASLHQRICDLAKTLAQRYRLACEIVYVDDGSTDATLSIAHGLPADAV  82
            S+VVP++NE  +++ + + + ++     + Y    EIV+++DGS DAT SI ++L+    
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQEL--KPY--EVEIVFINDGSKDATESIINALAVSDP  59

Query  83   DVQVVSLSRNFGKEAALMAGLDHARLGAVMFMDGDGQHPPHLVEQLVRHWIEDGYDVVYT  142
             V  +S++RNFGKE+AL AGLDHA  +AV+ +D D Q+P +++ +L+  W + G ++V +
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEMVLA  118

Query  143  AKAHRDNEPFLRRIAVHGFYALINWGARQKIPEDAGDFRLLSPRAVAALRQLPERNRFFK  202
             +++R  +  L+R + + FY L N  +  KI E+ GDFRL+S   V  ++ LPERN F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  203  GLASWIGFRQIRVDYEPAPRIHGVTTFSAARLLGLSIEGVTSFSVAPLRFASLLGVILAG  262
            G+ SW+G +   V+Y  A R+ G++ F++ +L  L++EG+TSFS  PLR  + +G+++A+
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  263  GAFLFGLSILWEVWTTGKQVPGYPSLVIGLMTIGGVQLIMIGIVGEYIGKILSELKARPI  322
             +FL+G  ++ +    G+ V GYPSL+++++ +GGVQLI IG++GEYIG+I  E K+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  323  Y  323
            Y
Sbjct  299  Y  299

554) BJ6T_17650 in NC_017249


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (670),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 123/302 (41%), Positives = 203/302 (68%), Gaps = 5/302 (1%)

Query  22   LSIVVPVYNEAAGLAVLHQRICDLAKTLRQRYRLGCEVVYVDDGSADATLSIARSLPADA  81
            +S+VVPV+NE  +++V+ + + ++ + L+  Y    E+V+++DGS DAT SI  +L+   
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKP-Y--EVEIVFINDGSKDATESIINALAVSD  58

Query  82   VDVQVVSLSRNFGKEAALMAGLDHARLGAVMFMDGDGQHPPALVEQLVRHWIEDGYDVVY  141
              V  +S++RNFGKE+AL AGLDHA  +AV+ +D D Q+P  ++ +L+  W + G ++V 
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEMVL  117

Query  142  TAKAHRDNEPFLRRVAVRGFYSLINWGARQKIPEDAGDFRLLSPRAVAALRQLPERNRFF  201
            + +++R  +  L+R +   FY L N  +  KI E+ GDFRL+S   V  ++ LPERN F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  202  KGLASWIGFRQIRVDYEPAPRTHGVTTFSAARLLGLSIEGVTSFSVAPLRFASLLGVILA  261
            KG+ SW+G +   V+Y  A R  G++ F++ +L  L++EG+TSFS  PLR  + +G+++A
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  262  GGAFLFGLSILWEVWTTGKQVPGYPSLVIGLMTIGGVQLIMIGIVGEYIGKILSELKARP  321
            + +FL+G  ++ +    G+ V GYPSL+++++ +GGVQLI IG++GEYIG+I  E K+RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  322  IY  323
             Y
Sbjct  298  KY  299

555) Slin_0212 in NC_013730


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  181 bits (669),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 127/305 (42%), Positives = 202/305 (67%), Gaps = 11/305 (3%)

Query  1    MISLVVPAFNEEENLSVL--VHRLMAVMSQYECYEILIVDDGSSDQTRHVLRQLSQAYPA  58
             ISLVVP FNEEE ++V+    R    +  YE  EI++++DGS D T  ++  L+ + P 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEV-EIVFINDGSKDATESIINALAVSDPL  60

Query  59   VRFISFSRNFGHQMALRAGYDNARGEAVICLDADLQHPPELIPTLIEKWREGYEVVYTVR  118
            V  +SF+RNFG + AL AG D+A G+AVI +D DLQ+P E+IP LIEKW+ G E+V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  119  QADPKLSWFKRTTSKYFYQLLRNVSNLKIEDGAADFRLLDRKVVDTLKQFKENDLFLRGA  178
               +  +++KR T+  FY+L  ++S  KIE+  +DFRL+ R VV+ +K + E +LF++G 
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  179  ISWVGFRQCRILYEPAARYAGRSKYSFRKMLQLAAMGITSFSTRPL----YLSVLLGFTM  234
            +SWVG +   + Y  A R AG SK++ +K+ +LA  GITSFST PL    Y++++++   
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  235  FLMAGLFGAETLYEHFFTDATVSGWTTLVLLMVLIGGVQFIMIGIIGVYLGKTFVEVKGR  294
            F    L+GA  + + +  +  V G  +L++ ++++GGVQ+I IG++G Y+G+ ++E K+R
Sbjct  241  F----LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  295  PAYII  299
            P YI+
Sbjct  297  PKYIL  301

556) SDSE_0570 in NC_019042


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  180 bits (667),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 201/305 (66%), Gaps = 2/305 (0%)

Query  4    LSVIIPCFNEEKAILPYFEEMRQLELSMTSQLAFEYIFIDDGSKDQTLNILRDLATRFPN  63
            +S+++P FNEE AI  ++  +R+++     ++  E +FI+DGSKD T +I+  LA   P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKEAGLLAGLEEAKGNYITVMDVDLQDPPELLPLMFAKITEGYDVVVTRR  123
            V  LSF+R+FGKE++L+AGL++A G+ +  +DVDLQDP E++P ++ K   G ++V+++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  HNRQGEPWLRSALSHLFYSLIQNLSDTEIVSGVRDYRLMTRQVVDSILELGEVNRFSKGI  183
             +R  + +L+   ++ FY L +++S   I   V D+RLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGYRTTYISFDNRKRQHGKSHWSFWGLFRYSLDGFVNFSEMPLTIATWTGTfsflis  243
            +SWVG +T  + +    R  G S  + W L   +L+G+ +FS  PL + T  G F   IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  ilailfiviRKLLFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRPVYI  303
            +L    ++I  L+FG+PV G +S +  ILF+GG+QL+ +G++G YI++I+LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  IKEKH  308
            +K  +
Sbjct  301  LKKGR  305

557) SDE12394_02720 in NC_017567


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  180 bits (667),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 201/305 (66%), Gaps = 2/305 (0%)

Query  4    LSVIIPCFNEEKAILPYFEEMRQLELSMTSQLAFEYIFIDDGSKDQTLNILRDLATRFPN  63
            +S+++P FNEE AI  ++  +R+++     ++  E +FI+DGSKD T +I+  LA   P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKEAGLLAGLEEAKGNYITVMDVDLQDPPELLPLMFAKITEGYDVVVTRR  123
            V  LSF+R+FGKE++L+AGL++A G+ +  +DVDLQDP E++P ++ K   G ++V+++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  HNRQGEPWLRSALSHLFYSLIQNLSDTEIVSGVRDYRLMTRQVVDSILELGEVNRFSKGI  183
             +R  + +L+   ++ FY L +++S   I   V D+RLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGYRTTYISFDNRKRQHGKSHWSFWGLFRYSLDGFVNFSEMPLTIATWTGTfsflis  243
            +SWVG +T  + +    R  G S  + W L   +L+G+ +FS  PL + T  G F   IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  ilailfiviRKLLFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRPVYI  303
            +L    ++I  L+FG+PV G +S +  ILF+GG+QL+ +G++G YI++I+LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  IKEKH  308
            +K  +
Sbjct  301  LKKGR  305

558) SDEG_0540 in NC_012891


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  180 bits (667),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 201/305 (66%), Gaps = 2/305 (0%)

Query  4    LSVIIPCFNEEKAILPYFEEMRQLELSMTSQLAFEYIFIDDGSKDQTLNILRDLATRFPN  63
            +S+++P FNEE AI  ++  +R+++     ++  E +FI+DGSKD T +I+  LA   P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKEAGLLAGLEEAKGNYITVMDVDLQDPPELLPLMFAKITEGYDVVVTRR  123
            V  LSF+R+FGKE++L+AGL++A G+ +  +DVDLQDP E++P ++ K   G ++V+++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  HNRQGEPWLRSALSHLFYSLIQNLSDTEIVSGVRDYRLMTRQVVDSILELGEVNRFSKGI  183
             +R  + +L+   ++ FY L +++S   I   V D+RLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGYRTTYISFDNRKRQHGKSHWSFWGLFRYSLDGFVNFSEMPLTIATWTGTfsflis  243
            +SWVG +T  + +    R  G S  + W L   +L+G+ +FS  PL + T  G F   IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  ilailfiviRKLLFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRPVYI  303
            +L    ++I  L+FG+PV G +S +  ILF+GG+QL+ +G++G YI++I+LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  IKEKH  308
            +K  +
Sbjct  301  LKKGR  305

559) rfaG in NC_017481


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  180 bits (667),  Expect = 7e-47, Method: Compositional matrix adjust.
 Identities = 126/308 (41%), Positives = 201/308 (66%), Gaps = 4/308 (1%)

Query  4    KLSIIVPCYYEEETIPLFYEAVEKVKKELNGIELEYWFVNDGSQDGTLDEMRKLNAKDKE  63
            K+S++VP + EEE+IP+FY +V   + EL+  E+E  F+NDGS+D+T   +  L   D  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQ-ELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   HVHYVSFSRNFGKEAALYCGLQQATGDYITVMDADLQDPPDMLPEMIEILENEDYDCVGT  123
             V  +SF+RNFGKE+AL+ GL++A+GD +  +D DLQDP +++P++IE  +    + V +
Sbjct  61   VVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  124  RRTNRKGEPPIRSFFARMFYKLINKISDTEIVDGARDFRVMTRQMVDAILSMTEYNRFSK  183
            +R++R  +  ++   A  FYKL NKIS   I +   DFR+M+R++V+ I  + E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  184  GIFSWVGFNTKYLEYKNQERVAGTTSWNFWSLLKYSIDGIVNFSQAPLDIAVYFGMLTSF  243
            GI+SWVG +T  +EY   ERVAG +  N W L + +++GI +FS  PL +  Y+G++ + 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  244  FSGIGIVWIIIRYFLEGGDPTTGWTSTICLLLFFSGIQLMCLGIVGKYIGKIFSEVKRRP  303
            +S +   W+II   L  G+P  G  S +  +LF++G+QL+ +G++G YIG+I+ E K RP
Sbjct  239  ISFLYGAWMIIDT-LVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  304  VYIIKEKK  311
             YI+K  +
Sbjct  298  KYILKKGR  305

560) rfaG in NC_007929


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  180 bits (667),  Expect = 7e-47, Method: Compositional matrix adjust.
 Identities = 126/308 (41%), Positives = 201/308 (66%), Gaps = 4/308 (1%)

Query  4    KLSIIVPCYYEEETIPLFYEAVEKVKKELNGIELEYWFVNDGSQDGTLDEMRKLNAKDKE  63
            K+S++VP + EEE+IP+FY +V   + EL+  E+E  F+NDGS+D+T   +  L   D  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQ-ELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   HVHYVSFSRNFGKEAALYCGLQQATGDYITVMDADLQDPPDMLPEMIEILENEDYDCVGT  123
             V  +SF+RNFGKE+AL+ GL++A+GD +  +D DLQDP +++P++IE  +    + V +
Sbjct  61   VVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  124  RRTNRKGEPPIRSFFARMFYKLINKISDTEIVDGARDFRVMTRQMVDAILSMTEYNRFSK  183
            +R++R  +  ++   A  FYKL NKIS   I +   DFR+M+R++V+ I  + E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  184  GIFSWVGFNTKYLEYKNQERVAGTTSWNFWSLLKYSIDGIVNFSQAPLDIAVYFGMLTSF  243
            GI+SWVG +T  +EY   ERVAG +  N W L + +++GI +FS  PL +  Y+G++ + 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  244  FSGIGIVWIIIRYFLEGGDPTTGWTSTICLLLFFSGIQLMCLGIVGKYIGKIFSEVKRRP  303
            +S +   W+II   L  G+P  G  S +  +LF++G+QL+ +G++G YIG+I+ E K RP
Sbjct  239  ISFLYGAWMIIDT-LVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  304  VYIIKEKK  311
             YI+K  +
Sbjct  298  KYILKKGR  305

561) GGS_0516 in NC_018712


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  180 bits (667),  Expect = 7e-47, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 201/305 (66%), Gaps = 2/305 (0%)

Query  20   LSVIIPCFNEEKAILPYFEEMRQLELSMTSQLAFEYIFIDDGSKDQTLNILRDLATRFPN  79
            +S+++P FNEE AI  ++  +R+++     ++  E +FI+DGSKD T +I+  LA   P 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSDPL  60

Query  80   VHYLSFSRHFGKEAGLLAGLEEAKGNYITVMDVDLQDPPELLPLMFAKITEGYDVVVTRR  139
            V  LSF+R+FGKE++L+AGL++A G+ +  +DVDLQDP E++P ++ K   G ++V+++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  140  HNRQGEPWLRSALSHLFYSLIQNLSDTEIVSGVRDYRLMTRQVVDSILELGEVNRFSKGI  199
             +R  + +L+   ++ FY L +++S   I   V D+RLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  200  FSWVGYRTTYISFDNRKRQHGKSHWSFWGLFRYSLDGFVNFSEMPLTIATWTGTfsflis  259
            +SWVG +T  + +    R  G S  + W L   +L+G+ +FS  PL + T  G F   IS
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  260  ilailfiviRKLLFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRPVYI  319
            +L    ++I  L+FG+PV G +S +  ILF+GG+QL+ +G++G YI++I+LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  320  IKEKH  324
            +K  +
Sbjct  301  LKKGR  305

562) LBU_0044 in NC_017469


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  179 bits (665),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 130/301 (44%), Positives = 209/301 (70%), Gaps = 1/301 (0%)

Query  19   KKISIIVPCYNEEEALPFFYPVAHEVLEKLPDDYELIFVNDGSKDKTLEILRDLAAKDPH  78
             KIS++VP +NEEEA+P FY   +E  E  P + E++F+NDGSKD T  I+  LA  DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  79   VFYISFSRNFGKEAAMYAGFVNASGDYVAVMDADLQDPPALLPEMIKILDSGEYDSVATR  138
            V  +SF+RNFGKE+A++AG+ +ASGD V  +D DLQDP  ++P++I   ++G  + V ++
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  139  REDRKGEPPVRSWFARKFYQIINKISDADVVDGARDFRLMKRDMVDAIVEMSEYNRFSKG  198
            R DR  +  ++   A  FY++ NKIS + + +   DFRLM R++V+ I  ++E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  199  IFGWVGFKTYWLPYENVERVAGESKWNFWKLLKYAIDGIINFSLVPLNLSSWMGFFMTGV  258
            I++WVG +T  + Y   ERVAG SK N WKL + A++GI +FS  PL + + +G+F++++
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  259  SFIMLIVIVLRKLIKGDPVAGWASLICVVIFIgglvmlslgvmgQYLAKIYMESKRRPHY  318
            SF+    +++  L+ G+PV G +SL+  ++F+GG+ ++++GV+G+Y+++IY+E+K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  319  I  319
            I
Sbjct  300  I  300

563) Ldb0071 in NC_008054


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  179 bits (665),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 130/300 (44%), Positives = 209/300 (70%), Gaps = 1/300 (0%)

Query  3    KISIIVPCYNEEEALPFFYPVAHEVLEKLPDDYELIFVNDGSKDKTLEILRDLAAKDPHV  62
            KIS++VP +NEEEA+P FY   +E  E  P + E++F+NDGSKD T  I+  LA  DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   FYISFSRNFGKEAAMYAGFVNASGDYVAVMDADLQDPPALLPEMIKILDSGEYDSVATRR  122
              +SF+RNFGKE+A++AG+ +ASGD V  +D DLQDP  ++P++I   ++G  + V ++R
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKR  120

Query  123  EDRKGEPPVRSWFARKFYQIINKISDADVVDGARDFRLMKRDMVDAIVEMSEYNRFSKGI  182
             DR  +  ++   A  FY++ NKIS + + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  183  FGWVGFKTYWLPYENVERVAGESKWNFWKLLKYAIDGIINFSLVPLNLSSWMGFFMTGVS  242
            ++WVG +T  + Y   ERVAG SK N WKL + A++GI +FS  PL + + +G+F++++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  243  FIMLIVIVLRKLIKGDPVAGWASLICVVIFIgglvmlslgvmgQYLAKIYMESKRRPHYI  302
            F+    +++  L+ G+PV G +SL+  ++F+GG+ ++++GV+G+Y+++IY+E+K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

564) LBUL_0061 in NC_008529


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  179 bits (665),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 130/300 (44%), Positives = 209/300 (70%), Gaps = 1/300 (0%)

Query  3    KISIIVPCYNEEEALPFFYPVAHEVLEKLPDDYELIFVNDGSKDKTLEILRDLAAKDPHV  62
            KIS++VP +NEEEA+P FY   +E  E  P + E++F+NDGSKD T  I+  LA  DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   FYISFSRNFGKEAAMYAGFVNASGDYVAVMDADLQDPPALLPEMIKILDSGEYDSVATRR  122
              +SF+RNFGKE+A++AG+ +ASGD V  +D DLQDP  ++P++I   ++G  + V ++R
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKR  120

Query  123  EDRKGEPPVRSWFARKFYQIINKISDADVVDGARDFRLMKRDMVDAIVEMSEYNRFSKGI  182
             DR  +  ++   A  FY++ NKIS + + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  183  FGWVGFKTYWLPYENVERVAGESKWNFWKLLKYAIDGIINFSLVPLNLSSWMGFFMTGVS  242
            ++WVG +T  + Y   ERVAG SK N WKL + A++GI +FS  PL + + +G+F++++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  243  FIMLIVIVLRKLIKGDPVAGWASLICVVIFIgglvmlslgvmgQYLAKIYMESKRRPHYI  302
            F+    +++  L+ G+PV G +SL+  ++F+GG+ ++++GV+G+Y+++IY+E+K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

565) Cpha266_0350 in NC_008639


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  179 bits (665),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 125/301 (42%), Positives = 203/301 (68%), Gaps = 3/301 (0%)

Query  4    LSLVIPCYNEEAVIDETIKRLKTFCSERNDLDVELILVDDGSRDRTRMLLKSYASDDTRI  63
            +SLV+P +NEE  I    K ++ F  E +  +VE+++++DGS+D T  ++++ A  D  +
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   KVIVFARNFGHQIAVTAGIDAARGDAVVLIDADLQDPPEVIHKMIAKWREGYDVIYGTRA  123
              + F+RNFG + A+ AG+D A GDAV+ ID DLQDP EVI  +I KW+ G +++ + R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  VRIGESAFKQFSARFFYRFLNKLSDIPIPLDTGDFRLMSRDVVDTLKAMPENDRFVRGMV  183
             R  ++ +K+ +A  FY++ NK+S   I  + GDFRLMSR+VV+ +K +PE + F++G++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  SWVGFKQTALPYTRQERFAGESKYPLKKMLRFANDGILSFSTKPLQisislgllsaalaf  243
            SWVG +   + Y R ER AG SK+   K+  +A +GI SFST PL++   +GL+ A+++F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  agiiYALLVR-IFTYNWVEGWAGIMIAVLFLGGIQLISVGILGEYIGRIYNEVKKRPLYV  302
                  ++   +F    V G +++++++LFLGG+QLI++G+LGEYIGRIY E K RP Y+
Sbjct  242  LYGAWMIIDTLVFGNP-VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  303  V  303
            +
Sbjct  301  L  301

566) Cyan7425_1943 in NC_011884


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  179 bits (665),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 126/305 (42%), Positives = 201/305 (66%), Gaps = 7/305 (2%)

Query  7    TLSLVIPIFNEAETIPELYQRVKAVIDRLEHAAEVIMIDDGSQDHSLKLIRDLHQSDRRF  66
             +SLV+P+FNE E+IP +Y+ V+   +      E++ I+DGS+D +  +I  L  SD   
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  67   CYLSFARNFGHQVAVTAGLNFARGEAVVLLDADLQDPPELIPAMIELWQQGYEVVYGQRT  126
              LSF+RNFG + A+ AGL+ A G+AV+ +D DLQDP E+IP +IE WQ G E+V ++R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  127  HRHKENWLKRFTAYVFYRVLSYLAEVDIPIDAGDFCLMDRRVVKVLNAMPERERYIRGLR  186
            +R  + +LKR TA  FY++ + ++   I  + GDF LM R VV  ++ +PER+ +++G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  187  AWVGFRQTAIPFEREPRFAGEVKYTLRKSLRLAINSIIAFSRVPLRLSTYlglfaaglal  246
            +WVG +   + + R  R AG  K+  +K   LA+++I +FS  PLR+ TY+GLF A++++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  247  lmiilvlYWRLFEP---NSHLTGYaiiaiaiFFLGAVQLLCIGILGEYIGRIYEEVKGRP  303
            L       W +++     + + GY+ + ++I+FLG+VQL+ IG+LGEYIGRIY E K+RP
Sbjct  242  LYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  304  LYTLR  308
             Y L+
Sbjct  298  KYILK  302

567) PHZ_c0185 in NC_011144


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 143/304 (48%), Positives = 215/304 (71%), Gaps = 2/304 (0%)

Query  8    KRLSLVTPMHDEAPaldaffarvdaaaaglgvELEIVCVDDGSRDDTYERLAARAAADPR  67
             ++SLV P+ +E  A+  F+  V         E+EIV ++DGS+D T   + A A +DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  68   IRLIGLSRNFGKEAALTAGLDAASGDMVVPIDADLQDPPELIAEFLALWEQGYDVVYGVr  127
            +  ++++RNFGKE+AL AGLD ASGD V+PID DLQDP E+I++++  W+ G ++V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  128  adrasdsaaKRVTAGAFYRVFNLVSDHPIPASAGDFRLMDRQVVEALKRLPERNRFMKGL  187
            +DR++D+  KR TA  FY++ N +S   I  + GDFRLM R+VVE +K LPERN FMKG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  188  FAWVGFRQVGVPYVRPPRSAGTSSW-GWLKLWRFAVDGITAFTTAPLRVWSvvgvlaala  246
            ++WVG +   V YVR+ R AG S   GW KLW +A++GIT+F+T PLRVW+ +G++ A  
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGW-KLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  247  ailfglviivrvlvigrDVPGYASLMVVLLFGFALQMIALGVLGEYVGRMYEEVKRRPIY  306
            ++L+G  +I+  LV+G  V GY+SL+V +LF  ++Q+I++GVLGEY+GR+Y E K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  307  MVRR  310
            ++++
Sbjct  300  ILKK  303

568) Mmol_1244 in NC_012968


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 130/302 (44%), Positives = 207/302 (69%), Gaps = 5/302 (1%)

Query  14   HISIIVPAFNEEAAIVSTIHTIVDRVKQLSA-NWEIIVIDDGSRDQTANIVRSLP--ESL  70
             IS++VP FNEE AI + +   V   ++L + + EI+ I+DGS+D T +I+ +L+  ++L
Sbjct  2    KISLVVPVFNEEEAI-PVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  71   QTTLVRFSRNFGKEYAITAGLEYATGNVVICMDADGQHSSELLVEMLAKWRAGYDMVYAY  130
               L  F+RNFGKE A+ AGL+ A+G+ VI +D D Q++ E++ +++ KW+AG +MV A 
Sbjct  61   VVPL-SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  131  RQDRDVESRFKRWGSRIFYRAISLGGQIHIPRDAGDFRLMDRQVVNALLSLPERNRFMKG  190
            R DR  ++R+KR  +  FY+  +  +   I  + GDFRLM R+VV+ +  LPERN FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  191  IYAWVGYHSIGIPYIPLPRSHGESAFSKLKLIQLAWTGVTSFSVMPlrlasavgallall  250
            I +WVG ++  + Y+   R  G S F+  KL +LA  G+TSFS  PLR+ + +G ++A +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  251  SFTYGMYVVVDHMFFDKSVPGWPTIIASMMFFAGVQLLFIGILGEYLSRIYDEVKGRPPY  310
            SF YG  +++D + F+++V G P+++ S++F++GVQL+ IG+LGEY++RIY E K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  311  IV  312
            I+
Sbjct  300  IL  301

569) N134_07655 in NC_021872


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  179 bits (663),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 127/308 (42%), Positives = 198/308 (65%), Gaps = 5/308 (1%)

Query  3    KLSIVVPCYNEEETIPLFYPAVEKVVKQMPVDTEYWFVNDGSSDGTLAELRKLHAQDPER  62
            K+S+VVP +NEEE+IP+FY +V       P + E  F+NDGS D+T + +  L   DP  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   VHYVSFSRNFGKEAGLYAGLQAATGDYIVVMDADLQDPPEYLPEMYQDISKGEYDCVGMR  122
            V  +SF+RNFGKE++L+AGL+ A+GD ++ +D DLQDP E +P++ +    G  + V  +
Sbjct  62   VP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  123  RTDRKGEAKFKSFLSNQFYNVINKISDTKIVSGARDYRMMTRQMVDAVLSLTEYNRFSKG  182
            R+DR  ++++K   ++ FY++ NKIS  KI     D+R+M+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFNWVGFKTKYLPYKNVERVAGTTDWSTWKLFKYAIDGITDFSEAPLAIATWA-GGLTAF  241
            I++WVG +T  + Y   ERVAG +  + WKL + A++GIT FS  PL +  W+  GL   
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIGLFVA  237

Query  242  isiigmiivvirkiLEPSSSAFGWASMVCIILFLGGIQLLCLGIVGRYIGRIYMQTKKRP  301
               +     +I   L  +++  G +S++  ILFLGG+QL+ +G++G YIGRIY++TK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  IYIIKEKK  309
             YI+K  +
Sbjct  298  KYILKKGR  305

570) LSA1519 in NC_007576


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 130/308 (43%), Positives = 207/308 (68%), Gaps = 3/308 (0%)

Query  3    KTISIIVPCFNEQESVPLFYAAVEKVAAQLPDHAIEYLFINDGSADQTLPAMRTLQAQDP  62
              IS++VP FNE+E++P+FY +V +   +L    +E +FINDGS D T + + +L   DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  63   EHVHYISFSRNFGKEAALYAGLQAATGDYVAVMDVDLQDPPALLPEMIQGIEVEGYDCVG  122
              V  +SF+RNFGKE+AL+AGL+ A+GD V  +DVDLQDP  ++P++I+  +  G + V 
Sbjct  60   LVVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQ-AGAEMVL  117

Query  123  TRRTTRAGEPPVRSFFAKKFYQIINHISQTKIVDGARDYRLMTRQMVDAILEMTEYNRFS  182
            ++R+ R+ +  ++   A  FY++ N IS  KI +   D+RLM+R++V+ I  + E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  183  KGIFSWVGFDTKYLEYQNQDRVAGTTSWSFWGLFKYSLDGIVTFSETPLaiasfigffsf  242
            KGI+SWVG +T  +EY   +RVAG +  + W L + +L+GI +FS  PL + ++IG+F  
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  243  iiasialifiiiraiifGDPTSGWPSLISVVLMIGGLQLLCLGIVGKYIGKIYLEVKNRP  302
             I+ +    +II +++FG+P  G PSL+  +L +GG+QL+ +G++G YIG+IYLE K+RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  303  VYIVKEKK  310
             YI+K  +
Sbjct  298  KYILKKGR  305

571) all5118 in NC_003272


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 127/305 (42%), Positives = 202/305 (67%), Gaps = 7/305 (2%)

Query  4    KYSFIVPIYNEEETITEMYRRISQVMDQMDGSVELCLVNDGSRDRSLKMMRELHQKDPRV  63
            K S++VP++NEEE+I   Y+ + +  +     VE+ ++NDGS+D +  ++  L   DP V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   VYLSLARNFGHQIAVTAGLNFARGQIVVILDADLQDPPELIAEMVELWRQGYHIIYAQRI  123
            V LS++RNFG + A+ AGL+ A G+ V+ +D DLQDP E+I++++E W+ G +++ A+R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  KRRQEGWFKRFTAYAFYRILKQLADVDIPTDTGDFCLLDRQVVDVLNAMPERNRYIRGLR  183
             R  +G++KR TA  FY++ ++++   I  + GDF L+ R+VV+ ++ +PERN +++G+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  SWVGFNQTAVKFERDPRFAGDVKYTFRKSFALAINGIVSFSKVPLRLSTYLGLFAAIASL  243
            SWVG +   V + R  R AG  K+  +K   LA++GI SFS  PLR+ TY+GLF A  S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  LMCLLVLYWRIFTP---HSPLTgiaiiliaifflgaVQLVSIGILGEYIGRIYEEVKQRP  300
            L       W I+      +P+ G + +L++I+FLG+VQL++IG+LGEYIGRIY E K RP
Sbjct  242  LYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  LYTLS  305
             Y L 
Sbjct  298  KYILK  302

572) SSUA7_0881 in NC_017622


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 133/302 (45%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVVVPCFNEEEAIPYFYDAMEKVRKEMEEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS+VVP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKEaalyaglqaaqgglVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFARLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

573) LMOSLCC2482_2554 in NC_018591


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  178 bits (660),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 131/301 (44%), Positives = 208/301 (70%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFINDGSKDKTLEIVKQLHKEDNR  63
            I++ VP +NE+E+I  +Y T+ +  + +K  Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKP-YEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELIKEMIELWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++IE W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+ W+YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K N + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYIVIKTLIVGSDVSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRLLYF  303
            F+Y   ++I TL+ G+ V G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K R  Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

574) ECBG_01921 in NC_020995


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  178 bits (658),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 126/310 (41%), Positives = 208/310 (68%), Gaps = 9/310 (2%)

Query  2    LSIVVPCFNEEASLPIFFEETEKVKKHLNMPFEYIFVNDGSSDQTLSVLRDLYRTHPESV  61
            +S+VVP FNEE ++P+F+      +       E +F+NDGS D T S++  L  ++P  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYLSFSRNFGKEAALYAGLQAAKGDFVTVMDADLQDPPTLLPEMFAMLEAKPELDCVGTR  121
              LSF+RNFGKE+AL+AGL+ A GD V  +D DLQDP  ++P+++   +A +E+  V ++
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  122  RADRKGEPKIRSFFSDAFYNIINKIADTEMVNGARDFRLMRRNMVDAVLQLSEYNRFSKG  181
            R+DR  + +++   ++ FY++ NKI+   + +   DFRLM R++V+ +  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFDTEYIAYENRERVAGETSWSFWKLFQYSIDGIVNFSDTPLNIASFIGALSCFG  241
            I+SWVG +T+ + Y   ERVAG +  + WKL + +++GI +FS  PL + ++IG    F 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL---FV  236

Query  242  SLIALIF---IVIRTFIFGDPTTGWPSMVSIFLFVgglqllclgiigKYIGKIFLETKNR  298
            + I++++   ++I T++FG+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK+R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PLYFLKETEK  308
            P Y+LK   K
Sbjct  297  PKYILKKGRK  306

575) MPTP_0516 in NC_015516


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  177 bits (656),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 133/311 (43%), Positives = 202/311 (65%), Gaps = 15/311 (4%)

Query  2    LSIVVPCYNEEESIPLFFDEVEKVSNQLDQSVEYIFINDGSKDNTLTTLRELYKKNPLKV  61
            +S+VVP +NEEE+IP+F+  V    +     VE +FINDGSKD T + +  L   +PL V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYLSFSRNFGKEAGLYAGLKEAKGDLITVMDVDLQDPPELLPKMIKMLDENLELDCIGTR  121
              LSF+RNFGKE++L+AGL +A GD +  +DVDLQDP E++P +I   +   E+  + ++
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  122  RVTRDGEPPIRSFFARLFYKLINRIGETEMVDGARDFRLMTRQMVDAILELKEYNRFSKG  181
            R  R  +  ++   A  FYKL N+I+   + +   DFRLM+R++V+ I  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFNTQYLEYENRERVAGET---SWSFWSLLSYSIDGIIDFSDAPLNIASYAGAFS  238
            I+SWVG +T+ +EY   ERVAG +   +W +W+L   +++GI  FS  PL + +Y G F 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  239  CIGSTIAMLI---IIFRTLINGDPTSGWPSMVCIFLFVggiqllclgiigKYIGKIFLET  295
               ++I+ L    +I+ TL+ G+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LET
Sbjct  237  ---ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  296  KRRPIYIVKET  306
            K RP YI+K  
Sbjct  294  KSRPKYILKKG  304

576) MPD5_1400 in NC_016938


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  177 bits (656),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 133/311 (43%), Positives = 202/311 (65%), Gaps = 15/311 (4%)

Query  2    LSIVVPCYNEEESIPLFFDEVEKVSNQLDQSVEYIFINDGSKDNTLTTLRELYKKNPLKV  61
            +S+VVP +NEEE+IP+F+  V    +     VE +FINDGSKD T + +  L   +PL V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYLSFSRNFGKEAGLYAGLKEAKGDLITVMDVDLQDPPELLPKMIKMLDENLELDCIGTR  121
              LSF+RNFGKE++L+AGL +A GD +  +DVDLQDP E++P +I   +   E+  + ++
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  122  RVTRDGEPPIRSFFARLFYKLINRIGETEMVDGARDFRLMTRQMVDAILELKEYNRFSKG  181
            R  R  +  ++   A  FYKL N+I+   + +   DFRLM+R++V+ I  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFNTQYLEYENRERVAGET---SWSFWSLLSYSIDGIIDFSDAPLNIASYAGAFS  238
            I+SWVG +T+ +EY   ERVAG +   +W +W+L   +++GI  FS  PL + +Y G F 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  239  CIGSTIAMLI---IIFRTLINGDPTSGWPSMVCIFLFVggiqllclgiigKYIGKIFLET  295
               ++I+ L    +I+ TL+ G+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LET
Sbjct  237  ---ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  296  KKRPIYIVKET  306
            K RP YI+K  
Sbjct  294  KSRPKYILKKG  304

577) ykcC in NC_015391


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  177 bits (657),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 126/304 (42%), Positives = 210/304 (70%), Gaps = 7/304 (2%)

Query  4    ITILIPAYNEEAVIDKMYKKLDSVCGGLSQYAFEFLFVNDGSTDRTLEQIKAFKEKDSRV  63
            I++++P +NEE  I   YK +      L  Y  E++F+NDGS D T   I+A+   D+ V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   QYVDLSRNFGKETAMLAGFDYAKGDALIIIDADLQQPPETFAEMIHWWEEGYDDVYAVRK  123
              + ++RNFGKE A++AG+D A GDA+I ID DLQ+P E ++++I+ W+ G + V A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  EREGETWLKKWTSDMYYRVLQNVAKVKVYPQAGDFRLLDKKCVAALTQLREHERYTKGMY  183
            +R  + +LK+ T++ +Y++ ++++  K+  + GDFRL+ +  V  +  L E++ + KG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  GWIGFKKKEISYIAEARAAGETK---WKLSALMNLALNGITSYSTMPLRIWSIIGFIISM  240
            +W+G +   + Y+   R AG +K   WKL    NLAL+GITS+ST PLR+W+ IG++++ 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLW---NLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  241  FAFVYLTIEIIRTMLFGTSVAGYPSliagilflggiqlislgiigEYLGRVFVETKERPV  300
            ++F+Y +  II T++FG +V GYPSL+ +ILFLGG+QLI++G++GEY+GR+++ETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  301  YFIQ  304
            Y+++
Sbjct  299  YILK  302

578) ACIAD1119 in NC_005966


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  177 bits (655),  Expect = 6e-46, Method: Compositional matrix adjust.
 Identities = 125/299 (42%), Positives = 204/299 (69%), Gaps = 2/299 (0%)

Query  10   VVPAYNEAENLKKFIPALAANLEQQQLSYEIIVVDDGSRDDTLHVLQSMVDHYPLVV-LE  68
            VVP +NE E +  F  ++    E +    EI+ ++DGS+D T  +++++    PLVV L 
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLS  65

Query  69   LSRNFGKEAALSAGLDRVRGDITLLIDADFQHPLDAIPTMVNLWKNGYDMVYGIR-DRSS  127
            ++RNFGKE+AL AGLD+  GD  + ID D+Q+P++ IP +++ W+ G +MV + R DRS+
Sbjct  66   FTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRST  125

Query  128  ESWLKRILTNNYYKVLNMSSPIDIPENAGDFRLMDAKVVDAVRRLPEKNRYMKGLYAWVG  187
            +++LKR  ++ +YK+ N  S   I EN GDFRLM   VV+ ++ LPE+N +MKG+ +WVG
Sbjct  126  DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVG  185

Query  188  FKSIGIHFSEQQRQFGQSSFNGKALFRLAMSGLTGFTDLPLRLSIYLGALLALSAMGYGI  247
             ++  +++   +R  G S FNG  L  LA+ G+T+F+ +PLR+  Y+G ++A  +  YG 
Sbjct  186  GQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGA  245

Query  248  WVLIETLIEGIRVPGWAtlvigltllggiqllflgivgEYIARIYAEVKNRPKYIVSSE  306
            W++I+TL+ G  V G ++L++++ +LGG+QL+ +G++GEYI+RIY E K+RPKYI+   
Sbjct  246  WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKG  304

579) CLDAP_20770 in NC_017079


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  177 bits (654),  Expect = 9e-46, Method: Compositional matrix adjust.
 Identities = 136/301 (46%), Positives = 200/301 (67%), Gaps = 0/301 (0%)

Query  13   SLVIPVWNEEEVIPVLYERLVQVMESTGESWEVIFVNDGSTDHSlelllelHERDPRIKV  72
            SLV+PV NEEE IPV+Y  + +  E      E++F+NDGS D +  ++  L   DP +  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  73   LNFSRNFGHQIAITAGFDYADGDAVIVMDADLQDPPEVLLRMIERWREGYDVVYAVRIKR  132
            L+F+RNFG + A+ AG+D A GDAVI +D DLQDP EV+ ++IE+W+ G ++V A R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  133  EGESKFKLWTAAAFYRLIHSIADVDIPLDAGDFRLMDRRVVLAMRRLREKSRFMRGLSSW  192
              ++++K  TA  FY+L + I+   I  + GDFRLM R VV  ++ L E++ FM+G+ SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  193  VGFKQIAVEYERAPRYAGETKYPLRKMVRLAFNAITSFSHVPLQLATYTgfafagisgig  252
            VG +   VEY RA R AG +K+  +K+  LA+++ITSFS  PL++ TY G+  A+IS + 
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  253  iiiaifMRLLGNAQLLGQATTLVSVLFLGGVQLIFLGIIGEYLGRIYDEVKNRPLYIIAD  312
                I+  L+    + G ++ LVS+LFLGGVQLI +G++GEY+GRIY E K+RP YI+  
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKK  303

Query  313  A  313
            +
Sbjct  304  G  304

580) SSUBM407_0915 in NC_012926


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

581) SSGZ1_0888 in NC_017617


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

582) SSUJS14_0990 in NC_017618


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

583) SSU0863 in NC_012925


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

584) YYK_04085 in NC_018526


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

585) NJAUSS_0944 in NC_020526


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

586) SSUSC84_0909 in NC_012924


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

587) SSU12_0930 in NC_017619


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 203/302 (68%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

588) lse_2456 in NC_013891


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (652),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 129/301 (43%), Positives = 205/301 (69%), Gaps = 2/301 (0%)

Query  4    ITISVPAYNEQESIATLYETVVNVMDTVKDKYTFELLFINDGSKDNTLEIVKQLHTQDER  63
            I++ VP +NE+E+I+ +Y TV +  +     Y  E++FINDGSKD T  I++ L   D  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQEL--KPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPPELITEMIGLWELGYEDVYARR  123
            V  + ++RN+GKE A+ AG+D A GDAVI +D DLQ+P E+I ++I  W+ G E V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  NKRHGESWLKKATSKLYYKTLQKVTKTPVLPDTGDFRLLDRRCVDALKKLRETQRYTKGL  183
            + R  +++LK+ T+  +YK  +K++   +  + GDFRL+ R  V+ +K L E + + KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  YNWIGFKKVEVTFDAAPRHAGETKWSYRSLINLALEGITSYTTLPLRLSTIAGFAISLGT  243
             +W+G +   V +  A R AG +K + + L NLALEGITS++T+PLR+ T  G+ ++  +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  244  FIYLIYILIKTLVVGSTGSGFPTLMITilflggiqlisigiigEYLGRIFNEVKKRPLYF  303
            F+Y   ++I TLV G+   G+P+L+++ILFLGG+QLI+IG++GEY+GRI+ E K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  304  V  304
            +
Sbjct  301  L  301

589) Lreu_1376 in NC_009513


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (652),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 127/308 (42%), Positives = 198/308 (65%), Gaps = 5/308 (1%)

Query  3    KLSIVVPCYNEEETIPLFYPAVEKVVKQMPVDTEYWFVNDGSSDGTLAELRKLHEQDPEQ  62
            K+S+VVP +NEEE+IP+FY +V       P + E  F+NDGS D+T + +  L   DP  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   VHYVSFSRNFGKEAGLYAGLQAATGDYVVVMDADLQDPPEYLPEMYKAISTGEYDCVGMR  122
            V  +SF+RNFGKE++L+AGL+ A+GD V+ +D DLQDP E +P++     +G  + V  +
Sbjct  62   VP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  123  RTDRKGEAKFKSFLSNQFYNVINKISDTKIVSGARDYRMMTRQMVDAVLSLTEYNRFSKG  182
            R+DR  ++++K   ++ FY++ NKIS  KI     D+R+M+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFNWVGFKTKYLPYKNVERVAGTTDWSTWKLFKYAIDGITDFSEAPLAIATWA-GGLTAF  241
            I++WVG +T  + Y   ERVAG +  + WKL + A++GIT FS  PL +  W+  GL   
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIGLFVA  237

Query  242  isiigmiiviirkiiEPASSAFGWASMVCIILFLGGIQLLCLGIVGRYIGRIYMQTKKRP  301
               +     +I   +  +++  G +S++  ILFLGG+QL+ +G++G YIGRIY++TK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  IYIIKEKK  309
             YI+K  +
Sbjct  298  KYILKKGR  305

590) LAR_1295 in NC_010609


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (652),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 127/308 (42%), Positives = 198/308 (65%), Gaps = 5/308 (1%)

Query  3    KLSIVVPCYNEEETIPLFYPAVEKVVKQMPVDTEYWFVNDGSSDGTLAELRKLHEQDPEQ  62
            K+S+VVP +NEEE+IP+FY +V       P + E  F+NDGS D+T + +  L   DP  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   VHYVSFSRNFGKEAGLYAGLQAATGDYVVVMDADLQDPPEYLPEMYKAISTGEYDCVGMR  122
            V  +SF+RNFGKE++L+AGL+ A+GD V+ +D DLQDP E +P++     +G  + V  +
Sbjct  62   VP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  123  RTDRKGEAKFKSFLSNQFYNVINKISDTKIVSGARDYRMMTRQMVDAVLSLTEYNRFSKG  182
            R+DR  ++++K   ++ FY++ NKIS  KI     D+R+M+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFNWVGFKTKYLPYKNVERVAGTTDWSTWKLFKYAIDGITDFSEAPLAIATWA-GGLTAF  241
            I++WVG +T  + Y   ERVAG +  + WKL + A++GIT FS  PL +  W+  GL   
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIGLFVA  237

Query  242  isiigmiiviirkiiEPASSAFGWASMVCIILFLGGIQLLCLGIVGRYIGRIYMQTKKRP  301
               +     +I   +  +++  G +S++  ILFLGG+QL+ +G++G YIGRIY++TK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  IYIIKEKK  309
             YI+K  +
Sbjct  298  KYILKKGR  305

591) NH8B_1027 in NC_016002


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (653),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 123/302 (41%), Positives = 206/302 (69%), Gaps = 3/302 (0%)

Query  24   VSCIIPAYNEAENIVPLLQTLHGLLKEHGYRHELIVVDDGSRDAT--VEKVLSETAPLPV  81
            +S ++P +NE E I  + +T++ +     Y  E++ ++DGS+DAT  + + L+ + PL V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  82   TLVQLSRNFGKEIALTAGVNQAGGDVAVLIDGDFQHPPELVPEFLAHWRRGYDMVYSVRS  141
             L  ++RNFGKE AL AG+++A+GD  + ID D+Q+P E++P+++  W+ G +MV + RS
Sbjct  63   PL-SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  142  SREGESLAKRCFTRVFYTLLNTGARLKIPENTQDFRVLDRNILDALRAMPERDRFMKGLY  201
             R  ++  KR  +  FY L N  +  KI EN  DFR++ R++++ ++ +PER+ FMKG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  202  NWVGFTRLGLETHTNARRSGQSSFNFKRLLDLGLTGLTSFSTMPLRIWTLVGSAISLVAI  261
            +WVG     +E     R +G S FN  +L +L+L G+TSFST PLR+WT +G  ++ +++
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  262  GYAFYEVFRTLVYGNPLHGWPTLAVAVTFlggiqllsigilgEYVGRIFDEVKQRPNYLI  321
             Y+   ++ TLV+GNP++G P+L V++ FLGG+QL++IG+LGEY+GRI+ E K RP+Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  322  SR  323
             +
Sbjct  302  KK  303

592) LRI_0603 in NC_021494


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  176 bits (650),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 127/308 (42%), Positives = 199/308 (65%), Gaps = 5/308 (1%)

Query  3    KLSIVVPCYNEEETIPLFYPAVEKVVKQMPVDTEYWFVNDGSNDGTLAELRKLHEQDPER  62
            K+S+VVP +NEEE+IP+FY +V       P + E  F+NDGS+D+T + +  L   DP  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   VHYVSFSRNFGKEAGLYAGLQAATGDYVVVMDADLQDPPEYLPEMYRAISTGEYDCVGMR  122
            V  +SF+RNFGKE++L+AGL+ A+GD V+ +D DLQDP E +P++     +G  + V  +
Sbjct  62   VP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  123  RTDRKGEAKFKSFLSNQFYNVINKISDTKIVSGARDYRMMTRQMVDAVLSLTEYNRFSKG  182
            R+DR  ++++K   ++ FY++ NKIS  KI     D+R+M+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFNWVGFKTKYLPYKNVERVAGTTDWSTWKLFKYAIDGITDFSEAPLAIATWA-GGLTAF  241
            I++WVG +T  + Y   ERVAG +  + WKL + A++GIT FS  PL +  W+  GL   
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIGLFVA  237

Query  242  isiigmiiviirkiiEPASSAFGWASMVCIILFLGGIQLLCLGIVGRYIGRIYMQTKKRP  301
               +     +I   +  +++  G +S++  ILFLGG+QL+ +G++G YIGRIY++TK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  302  IYIIKEKK  309
             YI+K  +
Sbjct  298  KYILKKGR  305

593) Msm_1627 in NC_009515


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  175 bits (648),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 205/302 (68%), Gaps = 3/302 (0%)

Query  2    KTLDIVVPCYNEEEMLPIFYRELSN--NLKNINWNVIFINDGSNDNTLEVIKKLKNSYGN  59
              + +VVP +NEEE +P+FY+ + +  +LK  + +++FINDGS+D T  +I+ L  S   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  60   VKYISFSRNFGKESAIYAGLDYSTGDYIVLMDADLQDPPSLIPEML-KYISKYDIVGTRR  118
            V  +SF+RNFGKE+A++AGLD ++GD ++ +D DLQDP  +IP+++ K  +  ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  119  VTRKGEPPIRSFFARLFYKIANKITKIELVDGARDFRLMKREVVNAILDLKEYNRFSKGI  178
              R  +  ++   A  FYK+ NKI+   + +   DFRLM REVV+ I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  179  FQWVGFETKWLEYENIERQKGETSWSFWELFKYSIEGIVSFTTAPLHiatiigiffsiia  238
            + WVG +T  +EY   ER  G +  + W L + ++EGI SF+T PL++ T IG+F + I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  239  flsiiviviKTLLFGDPVEGWPSTISIILFLSGIQLFAAGIIGEYLAKIYLESKKRPLYI  298
            FL    ++I TL+FG+PV G PS +  ILFL+G+QL++ G++GEY+++IYLE+K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  299  IK  300
            +K
Sbjct  301  LK  302

594) SSU98_1017 in NC_009443


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  175 bits (649),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 133/306 (44%), Positives = 203/306 (67%), Gaps = 8/306 (2%)

Query  1    MISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDGTLTVLRQLSGQDRAV  60
             IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD+T +++  L+  D  V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  61   RYLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTR  120
              LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAK  119

Query  121  RVSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKG  180
            R  R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  181  IFAWVGFETEYLPYENVERVAGET---SWSFWNLLSYSIEGIINFSDTPLNIDSYTGLIN  237
            I++WVG +T+ + Y   ERVAG +   +W +WNL   ++EGI +FS  PL + +Y GL+ 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  238  FllslvlmvsvlHKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKR  297
              +S++    ++  TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  298  PIYIVK  303
            P YI+K
Sbjct  297  PKYILK  302

595) SSUD9_1150 in NC_017620


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  175 bits (647),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 202/302 (67%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDRTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

596) SSUST1_0937 in NC_017950


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  175 bits (647),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 202/302 (67%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDRTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

597) SSUST3_1040 in NC_015433


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  175 bits (647),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 202/302 (67%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDRTLTVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD T +++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

598) Moth_2359 in NC_007644


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  175 bits (646),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 132/313 (43%), Positives = 205/313 (66%), Gaps = 20/313 (6%)

Query  5    VRYTIIIPVYNEEDVIRETYRRLTLVMQSLGEPYE--LLFVNDGSEDRTAEIIEVLAETD  62
            ++ ++++PV+NEE+ I   Y+ +    Q L  PYE  ++F+NDGS D T  II+ LA +D
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQEL-KPYEVEIVFINDGSKDATESIINALAVSD  58

Query  63   DSVRLLNFSRNFGHQIAITAGMDYARGDAIVIIDADLQDPPELIPRMIEKWQEGYEVVYA  122
              V  L+F+RNFG + A+ AG+D A GDA++ ID DLQDP E+IP++IEKWQ G E+V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  123  RRVQRKGETLFKKWTASLFYRTLRMMTEVDIPLDTGDFRLIDRKVCDVMHSIREKSRFIR  182
            +R +R  +  +K+ TA  FY+    ++   I  + GDFRL+ R V + +  + E++ F++
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  183  GLISWIGFRQAAIEYIREERFAGKTKYPLKKMLRLAIDGITSFSHKPLKLATYLGLALSL  242
            G++SW+G +   +EY+R ER AG +K+   K+  LA++GITSFS  PL++ TY+GL ++ 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  243  PSFAY--------LVFSLGLKIFTASTISGGRWlftlllllngvnfillgilGEYIGRIY  294
             SF Y        LVF+  ++ + +  +S        +L+L GV++I +G+LGEYIGRIY
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVS--------ILFLGGVQLIGIGVLGEYIGRIY  290

Query  295  DETKDRPLYILRN  307
             ETK RP YIL++
Sbjct  291  LETKSRPKYILKK  303

599) SAAG_01127 in NC_022113


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  174 bits (645),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 134/308 (44%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigVVSEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV++EYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

600) SSUD12_0880 in NC_017621


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  174 bits (644),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 201/302 (67%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDRTLKVLRQLSGQDRAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD T  ++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

601) TL13_0918 in NC_021213


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  174 bits (645),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 132/302 (44%), Positives = 201/302 (67%), Gaps = 2/302 (0%)

Query  2    ISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKDRTLKVLRQLSGQDQAVR  61
            IS++VP FNEEEAIP FY ++   +     + E +F+NDGSKD T  ++  L+  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   YLSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRR  121
             LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKR  120

Query  122  VSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftflls  241
            ++WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  lvlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYI  301
            ++    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  VK  303
            +K
Sbjct  301  LK  302

602) CK5_23930 in NC_021022


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  174 bits (645),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 124/302 (42%), Positives = 206/302 (69%), Gaps = 3/302 (0%)

Query  1    MISIIVPCYNEQEAIPFFHKEITLVLKEIGE-DYELLFVNDGSKDDTLKELKALSEKDSH  59
             IS++VP +NE+EAIP F K +   ++E+   + E++F+NDGSKD T   ++AL+  D+ 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  60   VIYLSFSRNFGKEAAMYAGFCNAKGDYVAVMDADLQDPPALLPEMLRLLRSGEYDSVATR  119
            V+ LSF+RNFGKE+A++AG+ +A GD V  +D DLQDP  ++P+++   ++G  + V ++
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  120  RVSREGEPAVRSWFARRFYSIINKISEADIVDGARDFRLMKKSMVDAIVAMGEYNRFSKG  179
            R  R  +  ++   A +FY + NKIS + I +   DFRLM + +V+ I  + E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  180  LFGWIGFRTYWMPYENVERVAGETKWSFWKLFKYAIDGIINFSHVPLSIASWFGTTMTFF  239
            +++W+G +T  + Y   ERVAG +K + WKL + A++GI +FS  PL + + +G  ++ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  240  SFlalaviiirrliFGDPVAGWASIVCVVIFIGGIQLLCLGIMGQYISKTYLETKHRPHF  299
            SFL  A +II  L+FG+PV G +S++  ++F+GG+QL+ +G++G+YI++ YLETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  300  II  301
            I+
Sbjct  300  IL  301

603) csbB in NC_015978


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  174 bits (643),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 129/314 (42%), Positives = 197/314 (63%), Gaps = 14/314 (4%)

Query  3    TISLVVPCYNEQESITLFYDTVEKVFAGMNKDSKKYVPDYIFINDGSSDNTLKILNELHN  62
             ISLVVP +NE+E+I +FY TV + F  +    K Y  + +FINDGS D T  I+N L  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQEL----KPYEVEIVFINDGSKDATESIINALAV  56

Query  63   QHPETVHFISFSRNFGKESAITAGLRSANGDYIALMDVDLQDPPELLPKMLKIITTEDYD  122
             +P  V  +SF+RNFGKE+A+ AGL  A+GD +  +DVDLQDP E++P ++    +    
Sbjct  57   SDPLVVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  123  CVGCIQTSRKQNPIRAFLSSTFYHVIDRLSDVKIKPNVRDYRLMTRQYVDAVNDLTEYNR  182
             ++       +  ++   +  FY + +++S  KI  NV D+RLM+R+ V+ ++ L E N 
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  183  FSKGIFSWVGFNTKYIKYAGRERAAGETHWSMIQLLEYSIEGIIDFSDAPLKVATWV-GG  241
            F KGI+SWVG +T  + Y   ER AG +  +  +L + ++EGI  FS  PL+V  W   G
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIG  233

Query  242  LSCFFAVLGIIFT---VIRTICFGGSVAGWPSLVSIMLLIGGIQLFCLGILGKYIGKIYL  298
            L  F A +++++    +I T+ FG +V G PSL+  +L++GG+QL+ +G+LG YIG+IYL
Sbjct  234  L--FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYL  291

Query  299  ETKHRPQYIIKEQK  312
            ETK RP+YI+K  +
Sbjct  292  ETKSRPKYILKKGR  305

604) lse_0831 in NC_013891


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 123/297 (42%), Positives = 204/297 (69%), Gaps = 2/297 (0%)

Query  10   IVPVFNEEEVLLKTYQRLTEVMQSLDG-TYEIIFVNDGSRDSTRSILQKLSTEDSSVKAL  68
            +VPVFNEEE +   Y+ + E  Q L     EI+F+NDGS+D+T SI++ L+  D+ V +L
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPL  64

Query  69   HFSRNFGHQIAITAGANYASGEAVIVIDADLQDPPELIVQMVEKWKEGYQVVYAQRIKRN  128
             F+RNFG + A+ AG + ASG+AVI ID DLQDP E+I +++EKW+ G ++V A+R  R+
Sbjct  65   SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRS  124

Query  129  GETFFKKQSASLFYRILSKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSWL  188
             +  +K+++A  FY++ +K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW+
Sbjct  125  TDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWV  184

Query  189  GFKQTSIHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVITAFIGFVYL  248
            G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y 
Sbjct  185  GGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYG  244

Query  249  IIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
              ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  245  AWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

605) SACE_0180 in NC_009142


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  173 bits (641),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 127/305 (42%), Positives = 206/305 (68%), Gaps = 7/305 (2%)

Query  27   VSYVLPVYNEVEGIRRFHEELTAVVATRPEFRYEFVYVNDGSVDGSLGILRDLAKNDSRV  86
            +S V+PV+NE E+I  F   +      +P +  E+V++NDGS D++ +I+  LA +D+ V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  87   HVVDFARNFGHQIAITAGLDHAAGDAVIIMDTDLQDPPRVSLELIDAWLSGAEIVSARRR  146
              + F+RNFG + A+ AGLDHA+GDAVI +D DLQDP  V  +LI+ W +GAE+V A+R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  147  TRQ-DSRFKRFTAHGYYRLLRHCAEVDIPVDTGDFrlldrraaeelrGFRERSRFIRGMV  205
             R  D+R+KR TA+ +Y+L    +   I  + GDFRL+ R   E+++ + ER+ F++G++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  206  ASMGFQQAEVLFDRDERVAGETKYPMRKMLRLAADGVTSFSTVPLRLITRIGFVSLALAL  265
            + +G Q   V + R ERVAG +K+  +K+  LA +G+TSFST PLR+ T   +++L +A 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWT---YIGLFVAS  238

Query  266  LGIVYA--VALRVFLPEVTVSGWTMLMVAMLFLGGVQMLSLGVIGSYVGRIYNEVQQRPL  323
            ++++Y+  + +  ++    V G   L+V++LFLGGVQ++++GV+G Y+GRIY E + RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  324  YIVRK  328
            YI++K
Sbjct  299  YILKK  303

606) Cspa_c27890 in NC_020291


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 123/303 (41%), Positives = 202/303 (67%), Gaps = 10/303 (3%)

Query  8    SIIVPLYNEELVLNESYRRLKEVMVSTKENYEIVFVNDGSKDKTKVMAEEICASDDSVKL  67
            S++VP++NEE  +   Y+ ++E       + EIVF+NDGSKD T  + + +  SD  V  
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   INFSRNFGHQAAITAGMDLALGDAIIVIDADLQDPPEVMLEMIKKWKEGYEVVYGKRIKR  127
            ++F+RNFG ++A+ AG+D A GDA+I ID DLQDP EV+ ++I KW+ G E+V +KR  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  EGETFFKKFTAKMYYRVLKSMTSVDIPVDTGDFRLIDRKVCDALIALPEKNRYVRGLVSW  187
              +  +K+ TA  +Y++ + +++  I  + GDFRL+ R V + +  LPE+N +++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  VGYKQTYVEFVRQERFAGETKYPFKKMIKLAFDGITSLSYKPLVIAGHFGILAFIAGIIL  247
            VG +   VE+VR ER AG +K+   K+ +LA++GITS+S  PL +   +G+  F+A+I +
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL--FVASISF  241

Query  248  MFTD--IIKDL-FNKS--GFVNFTLMISINMMMFGVTLGCIGIMGQYIGRIFDESKGRPI  302
            ++    II  L F ++  G+   +L++SI + + GV L  IG++G+YIGRI+ E+K+RP 
Sbjct  242  LYGAWMIIDTLVFGNPVRGYP--SLLVSI-LFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  303  YII  305
            YI+
Sbjct  299  YIL  301

607) PEPE_1610 in NC_008525


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  173 bits (640),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 125/310 (41%), Positives = 205/310 (67%), Gaps = 8/310 (2%)

Query  2    KKLSIIVPAYNEEETVGLFYDAFSKVESQMDVEPEIIFVDDGSKDKTLIELKKLQKEHEE  61
             K+S++VP +NEEE++ +FY +    +     E EI+F++DGSKD T   ++ L   +  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VHYISFSRNFGKEAALYAGLQKATGDFVAVMDVDLQDPPELLPKMLKIVEEGEYDAVATR  121
            V  +SF+RNFGKE+AL+AGL+ A+GD V  +DVDLQDP E++P ++   + G  + V ++
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  122  RQDRDGESKIRSFFARMFYKWINKVSSLELVDGARDFRVMTRQMVDSVLSMDERERFSKG  181
            R DR  +++++   A  FYK  NK+S+  + +   DFR+M+R++V+++  + ER+ F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  LFNWVGFNTYYISYENRERVAGST---SWSFWGLLKYAIEGFISFSTAPLSFVTSAGVLT  238
            +++WVG +T  + Y   ERVAG +   +W +W L   A+EG+ SFST PL   T  G++ 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFV  236

Query  239  CvlavlgaiavvirailFPHTAAFGWPSLAVIILFFSGVQLLSLGIIGRYIAEIYLETKN  298
              ++ L +  ++I +++F +    G PSL V ILF++GVQL+++G++G YI+ IYLETK+
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVR-GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  299  RPIYIIKEEK  308
            RP YI+K  +
Sbjct  296  RPKYILKKGR  305

608) LVISKB_1507 in NC_020819


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  173 bits (641),  Expect = 7e-45, Method: Compositional matrix adjust.
 Identities = 135/319 (43%), Positives = 205/319 (65%), Gaps = 23/319 (7%)

Query  4    KISLVVPCYNEEESIPLFYQTVSKVITSMNTPTPTVEPEYIFVDDGSSDHTLDEMKQLHQ  63
            KISLVVP +NEEE+IP+FY+TV + +  ++      E E +F++DGS D T   ++ L  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKP----YEVEIVFINDGSKDATESIINALAV  56

Query  64   RYPETVHYRSFSRNFGKESALAAGLQATTGDLVAVMDVDLQDPPELLPKMFALIEN--DG  121
              P  V   SF+RNFGKE+AL AGL+ ++GD V  +DVDLQDP E++P    LIE+   G
Sbjct  57   SDPLVVPL-SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPH---LIEKWQAG  112

Query  122  YDCVGTVQKERRGQSKLRAFLSSSFYRVINWLSDVHIEPNARDYRLMTRQYVDTVLSLPE  181
             + V + + +R  +++L+   +  FY++ N +S   IE N  D+RLM+R+ V+ +  LPE
Sbjct  113  AEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPE  172

Query  182  FNRFSKGIFSWVGFKTTYLAYESQPRAAGTTHWNLRQLFAYSIEGIIDFSDAPLRLATW-  240
             N F KGI+SWVG +T  + Y    R AG +  N ++L   ++EGI  FS  PLR+  W 
Sbjct  173  RNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WT  230

Query  241  -----IGSLSFLLSIVGLIFVIVRALTVGGAVAGWPSLVVIMLLVGGIQLFCLGILGQYI  295
                 ++S+SFL +      +I+ +L  G +V G PSL+V +L++GG+QL+ +G+LG+YI
Sbjct  231  YIGLFVASISFLYGA----WMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYI  286

Query  296  SKIYLETKHRPKYIIREEQ  314
            ++IYLETK RPKYI++  +
Sbjct  287  GRIYLETKSRPKYILKKGR  305

609) SAMSHR1132_06490 in NC_016941


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  173 bits (641),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 137/308 (45%), Positives = 209/308 (68%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILARDSHLKGYNYNMLFIDDGSTDTTIDQMQHLAS  60
            MKI +V+P FNE E I    + + E+     +LK Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDNHVSFISFSRNFGKEAAMIAGYQHSTDFDAVIMIDCDLQHPPEYIPNMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H+++ DAVI ID DLQ+P E IP+++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VVAKR-DRNGENLSRKTLSHLYYKLVNCFVEEVKFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DR+ +   ++  ++ +YKL N  +   K+++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFVNILISGVNIPGYFSTiaailllggiqlisigvigEYIGRIYYEVK  299
            F+ SIS LY   ++++ L+ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

610) csbB in NC_017340


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

611) MS7_0755 in NC_017351


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

612) SABB_00753 in NC_021670


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

613) SAKOR_00701 in NC_022226


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

614) SACOL0764 in NC_002951


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

615) ECTR2_655 in NC_017343


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

616) SAEMRSA15_06300 in NC_017763


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (637),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSYISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

617) SaurJH1_0744 in NC_009632


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

618) SaurJH9_0728 in NC_009487


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

619) SAA6008_00720 in NC_017341


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

620) SAA6159_00659 in NC_017338


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (637),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSYISFSRNFGKEAAMIAGYQHSTKFDAVIMIDCDLQHPPEYIPKMIEGFMEGCDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP +IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

621) BN843_7050 in NC_021059


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

622) SAS0669 in NC_002953


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

623) MW0666 in NC_003923


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

624) SAOUHSC_00713 in NC_007795


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

625) NWMN_0673 in NC_009641


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

626) SAI1T1_2005440 in NC_020529


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

627) SAI2T2_1005460 in NC_020564


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

628) SAI3T3_1005450 in NC_020532


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

629) SAI4T8_1005440 in NC_020533


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

630) SAI7S6_1005450 in NC_020537


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

631) SAT0131_00774 in NC_017347


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

632) SATW20_07790 in NC_017331


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

633) SAI5S5_1005410 in NC_020566


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

634) SAI6T6_1005420 in NC_020536


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

635) SAI8T7_1005450 in NC_020568


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

636) SAUSA300_0689 in NC_007793


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

637) USA300HOU_0727 in NC_010079


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

638) SAVC_03155 in NC_016912


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

639) BCG9842_B5394 in NC_011772


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (637),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 129/306 (43%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASSDS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA SD+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNDGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLVSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSIYLGLLTTIF  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  GLLYVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

640) BTG_21225 in NC_018500


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (637),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 129/306 (43%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASSDS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA SD+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNDGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLVSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSIYLGLLTTIF  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  GLLYVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

641) R2APBS1_2036 in NC_020541


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (637),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 130/306 (43%), Positives = 218/306 (72%), Gaps = 2/306 (0%)

Query  5    VRLTVVVPAYNEAEVLPLFHARLVGVLDGMALDARVIYVDDGSRDGTWLVLNRLMGQDPR  64
            +++++VVP +NE E +P+F   +    +  + +  +++++DGS+D+T  ++N L   DP 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  65   IGALRLSRNFGKEAALTAGLdavtdeadaiviidadLQDPPELIPELLARWRAGYDVVYA  124
            + +L ++RNFGKE+AL AGLD  +++A   + +D  LQDP E+IP+L+ +W+AG ++V A
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD--LQDPIEVIPHLIEKWQAGAEMVLA  118

Query  125  TREHREGESWFKRATAHLFYRLMARMAAFNVPHDTGDFRLMSARAVAALRQLRERQRFMK  184
             R +R  ++++KR TA+ FY+L  ++++ ++ ++ GDFRLMS   V  ++ L ER+ FMK
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  185  GLFGWIGYPHTAVMYQRSPRQAGRTKWNYWRLFNLAVEGITSFSILPLRLATAVGVATSV  244
            G+++W+G     V Y R+ R AG +K N W+L NLA+EGITSFS +PLR+ T +G+  + 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  245  CAFSYGAGVFIKAVLWGDPVKGYPSlmvvvlvlgglqllalgvlgeylgRVYAEVKQRPI  304
             +F YGA ++I +++ G+PV+GYPSL+V +L LGG+QL+++GVLGEY+GR+Y E K RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  305  YLIEAA  310
            Y++  +
Sbjct  299  YILKKG  304

642) BTF1_25645 in NC_018508


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (635),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASSDS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA SD+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGNAIVIMDADLQHPPTLIKELLEGYNDGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+G+A++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLVSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSIYLGLLTTIF  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  GLLYVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

643) C248_0788 in NC_018608


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEIQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   I+ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

644) ST398NM01_0781 in NC_017673


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEIQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   I+ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

645) SAPIG0781 in NC_017333


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEIQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   I+ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

646) EFAU004_00549 in NC_017022


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 132/307 (43%), Positives = 210/307 (69%), Gaps = 3/307 (0%)

Query  1    MKVSIVVPCFNEEKTVPLFFDEVEKFKGAHEFE--YLFIDDGSKDGTLAAIKKLASAYPY  58
            MK+S+VVP FNEE ++P+F+  V  F+    +E   +FI+DGSKD+T + I+ LA + P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   VRFVSFSRNFGKEAALYAGLQASTGDLVTVMDVDLQDPPELLPEMINRITTSDIDCVGTR  118
            V  +SF+RNFGKE+AL+AGL+ ++GD V  +DVDLQDP E++P++I++  ++  + V ++
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  119  RSTREGEPAIRSFFAKKFYQLINKISDTEMVDGARDFRLMTRQMVDAVLELTEYNRFSKG  178
            RS R  +  ++   A  FY+L NKIS   + +   DFRLM+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWVGFKTEYISYENRERVAGETSWSFWKLFNYSIDGIVNFSDAPLTIASFIGALSCVG  238
            ++SWVG +T+ + Y   ERVAG +  + WKL N +++GI +FS  PL + ++IG +    
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  SGiailfiilrallfGDPTSGWPSMVSiflfiggiqllclgiigKYIGKIFLETKQRPVY  298
            S +    +I+ +L+FG+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IIRETEK  305
            I++   K
Sbjct  300  ILKKGRK  306

647) EFAU085_00487 in NC_021994


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 132/307 (43%), Positives = 210/307 (69%), Gaps = 3/307 (0%)

Query  1    MKVSIVVPCFNEEKTVPLFFDEVEKFKGAHEFE--YLFIDDGSKDGTLAAIKKLASAYPY  58
            MK+S+VVP FNEE ++P+F+  V  F+    +E   +FI+DGSKD+T + I+ LA + P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   VRFVSFSRNFGKEAALYAGLQASTGDLVTVMDVDLQDPPELLPEMINRITTSDIDCVGTR  118
            V  +SF+RNFGKE+AL+AGL+ ++GD V  +DVDLQDP E++P++I++  ++  + V ++
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  119  RSTREGEPAIRSFFAKKFYQLINKISDTEMVDGARDFRLMTRQMVDAVLELTEYNRFSKG  178
            RS R  +  ++   A  FY+L NKIS   + +   DFRLM+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWVGFKTEYISYENRERVAGETSWSFWKLFNYSIDGIVNFSDAPLTIASFIGALSCVG  238
            ++SWVG +T+ + Y   ERVAG +  + WKL N +++GI +FS  PL + ++IG +    
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  SGiailfiilrallfGDPTSGWPSMVSiflfiggiqllclgiigKYIGKIFLETKQRPVY  298
            S +    +I+ +L+FG+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IIRETEK  305
            I++   K
Sbjct  300  ILKKGRK  306

648) HMPREF0351_10563 in NC_017960


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 132/307 (43%), Positives = 210/307 (69%), Gaps = 3/307 (0%)

Query  1    MKVSIVVPCFNEEKTVPLFFDEVEKFKGAHEFE--YLFIDDGSKDGTLAAIKKLASAYPY  58
            MK+S+VVP FNEE ++P+F+  V  F+    +E   +FI+DGSKD+T + I+ LA + P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   VRFVSFSRNFGKEAALYAGLQASTGDLVTVMDVDLQDPPELLPEMINRITTSDIDCVGTR  118
            V  +SF+RNFGKE+AL+AGL+ ++GD V  +DVDLQDP E++P++I++  ++  + V ++
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  119  RSTREGEPAIRSFFAKKFYQLINKISDTEMVDGARDFRLMTRQMVDAVLELTEYNRFSKG  178
            RS R  +  ++   A  FY+L NKIS   + +   DFRLM+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWVGFKTEYISYENRERVAGETSWSFWKLFNYSIDGIVNFSDAPLTIASFIGALSCVG  238
            ++SWVG +T+ + Y   ERVAG +  + WKL N +++GI +FS  PL + ++IG +    
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  SGiailfiilrallfGDPTSGWPSMVSiflfiggiqllclgiigKYIGKIFLETKQRPVY  298
            S +    +I+ +L+FG+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IIRETEK  305
            I++   K
Sbjct  300  ILKKGRK  306

649) M7W_725 in NC_020207


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 132/307 (43%), Positives = 210/307 (69%), Gaps = 3/307 (0%)

Query  1    MKVSIVVPCFNEEKTVPLFFDEVEKFKGAHEFE--YLFIDDGSKDGTLAAIKKLASAYPY  58
            MK+S+VVP FNEE ++P+F+  V  F+    +E   +FI+DGSKD+T + I+ LA + P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   VRFVSFSRNFGKEAALYAGLQASTGDLVTVMDVDLQDPPELLPEMINRITTSDIDCVGTR  118
            V  +SF+RNFGKE+AL+AGL+ ++GD V  +DVDLQDP E++P++I++  ++  + V ++
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  119  RSTREGEPAIRSFFAKKFYQLINKISDTEMVDGARDFRLMTRQMVDAVLELTEYNRFSKG  178
            RS R  +  ++   A  FY+L NKIS   + +   DFRLM+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWVGFKTEYISYENRERVAGETSWSFWKLFNYSIDGIVNFSDAPLTIASFIGALSCVG  238
            ++SWVG +T+ + Y   ERVAG +  + WKL N +++GI +FS  PL + ++IG +    
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  SGiailfiilrallfGDPTSGWPSMVSiflfiggiqllclgiigKYIGKIFLETKQRPVY  298
            S +    +I+ +L+FG+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IIRETEK  305
            I++   K
Sbjct  300  ILKKGRK  306

650) SAHV_0701 in NC_009782


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (634),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISALYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

651) SAV0704 in NC_002758


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (634),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISALYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

652) SA0659 in NC_002745


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (634),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 206/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISALYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

653) LIV_0875 in NC_016011


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (634),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 125/302 (42%), Positives = 202/302 (67%), Gaps = 2/302 (0%)

Query  5    MDYSCIVPVFNEEEVLVKTYQRLTDVMQSLDG-TYEIIFVNDGSKDLTRSILQKLSTEDN  63
            M  S +VPVFNEEE +   Y+ + +  Q L     EI+F+NDGSKD T SI++ L+  D 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  64   CVKALHFSRNFGHQIAITAGANYASGKAVIVIDADLQDPPELIVQMVKKWKEGYQVVYAK  123
             V +L F+RNFG + A+ AG + ASG AVI ID DLQDP E+I +++ KW+ G ++V AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  124  RLKRKGESFFKKQSASLFYRILSKLTDINIPVDTGDFRLMDAQVCRELASLHEKNPFVRG  183
            R  R  ++ +K+++A  FY++ +K++  +I  + GDFRLM  +V  ++  L E+N F++G
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  184  QVSWLGFKQTAIHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFI  243
             +SW+G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  244  GFVYLIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLY  303
            +F+Y   ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  304  IV  305
            I+
Sbjct  300  IL  301

654) RSAU_000679 in NC_022222


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (633),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMIEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP +IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

655) SAOV_0738 in NC_017337


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (633),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSYISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMIEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP +IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

656) SAAV_0666 in NC_013450


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (632),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y   ER  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  VRPKYIIQ  307
             RPKYI++
Sbjct  295  SRPKYILK  302

657) SARLGA251_06370 in NC_017349


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (633),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSYISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMIEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP +IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

658) M013TW_0690 in NC_016928


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (632),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMIEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP +IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

659) SA40_0644 in NC_022443


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (632),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMIEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP +IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

660) SA957_0659 in NC_022442


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (632),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMIEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP +IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

661) ENT_22900 in NC_021023


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (633),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 125/308 (41%), Positives = 202/308 (66%), Gaps = 10/308 (3%)

Query  3    KLFIVVPCYNEEEVLPISSKVLLDFLKRMIAKNKVSTESSILFVDDGSKDKTWAIIKRLS  62
            K+ +VVP +NEEE +P+  K + +F      ++  + E  I+F++DGSKD T +II+ L+
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREF------QELKPYEVEIVFINDGSKDATESIINALA  55

Query  63   EQEEHFKGLKFSRNFGHQNALLAGMTTAVQFADMIVTIDADLQDDVEAIEGMIDAYHDGN  122
              +     L F+RNFG + AL+AG+  A   +D ++ ID DLQD +E I  +I+  + G 
Sbjct  56   VSDPLVVPLSFTRNFGKEPALFAGLDHAS--GDAVIPIDVDLQDPIEVIPHLIEKWQAGA  113

Query  123  DVVYGVRSNRDTDTAFKRKTAEMFYSFMNKLGVNTVPNH-ADFRLMSNRATKVLLTFKEE  181
            ++V + RS+R TD  +KRKTAE FY + NK++   + ++ +DFRLMS      +  + E 
Sbjct  114  EMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPER  173

Query  182  NLFLRGMVPLVGFPSTKVYYSRNIRVAGESKYPLKKMLNFAMEGITSFSIVPIKMVRNIG  241
            NLF++G+++ VG  +  V Y R  RVAG SK+   K+ N+A+EGITSFS  P+++   IG
Sbjct  174  NLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIG  233

Query  242  FITLLIGIFYMIYSLIQHFT-GNVEAGWSSLIISIWFLGGIQLISLSIVGEYIGKIYSEV  300
            ++   I+++Y    +I+ +  GN   G +SL++SI FLGG+QLI+++++GEYIG+IY E 
Sbjct  234  LFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  301  KGRPRFII  308
            K+RP++I+
Sbjct  294  KSRPKYIL  301

662) CA347_720 in NC_021554


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (631),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 135/308 (44%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

663) SAR0757 in NC_002952


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (632),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 135/308 (44%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

664) HMPREF0772_12483 in NC_017342


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  171 bits (632),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 135/308 (44%), Positives = 205/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP ++E    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

665) LACR_2086 in NC_008527


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (627),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 134/310 (44%), Positives = 212/310 (69%), Gaps = 12/310 (3%)

Query  3    KLSIIVPAYNEEETLEIFLNEVNKQSVEL-PLEKTYFFINDGSTDNTLEVLKNLTTKYDN  61
            K+S++VP +NEEE++ +F + V ++  EL P E    FINDGS D T  +++ L+     
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VKYISFSRNFGKEAALIAGLEVSDGDFVTVMDADLQDPPEMLNEMFTKITEGYDVVGTRR  121
            V  +SF+RNFGKE+AL+AGL+ + GD V  +D DLQDP E++ +++ K   G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  122  VSRVGEPPIRSFFAKTFYKLINKISDTEMVDGVRDFRLMTRQVVDSILELKENNRFSKGI  181
              R  +  ++   A  FYKL NKIS   + + V DFRLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FSWVGFKTTYLPYENRERIAGTT---SWNFFGLLKYSIDGIVNFSEAPLNIATFVGFISF  238
            +SWVG +T  + Y   ER+AG +   +W++  L   +++GI +FS  PL + T++G+  F
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL--F  235

Query  239  LASV--LLSVFYLLKTLVFGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKK  296
            +AS+  L +   ++ TLVFG+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  297  RPNYIIKESN  306
            RP+YI+K + 
Sbjct  296  RPKYILKKGR  305

666) Clocl_2555 in NC_016627


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (627),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 127/302 (43%), Positives = 199/302 (66%), Gaps = 2/302 (0%)

Query  21   ISVVVPCYNEGELLLVLHNKLCEIAQLMAEVDFEYIFVDDGSKDNTITVIKSLYEKDSRV  80
            IS+VVP +NE E + V+ + + E+ +L +  + E +F++DGSKD T ++I++L   D+ V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  81   KYISFSRNFGKEAAMLSGMQMAKGDFVAIIDADMQDPPTMIPEMYKGIKEEGYDCVAARR  140
              +SF+RNFGKE+A+++G++ A GD V  ID D+QDP  +IP++     + G + V A+R
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEK-WQAGAEMVLAKR  120

Query  141  INRIGEPKLRSFFARQFYKLMRILSKTEIVDGARDFRLMTRQMTDAILSVCEYNRFSKGI  200
             +R  + +L+   A  FYKL   +S   I +   DFRLM+R++ + I  + E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  201  FSWVGFNTKWLEYENIERAGGRSKWSFWKLFLYSIDGIVAFSTAPLALSSLLGIFFCAia  260
            +SWVG +T  +EY   ER +G SK + WKL   +++GI +FST PL + + +G+F  +I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  261  fisivitiiRQLVWGGSAYGWSSLVCIILFLAGIQLFCIGILGQYLSKTYLETKKRPVYI  320
            F+     II  LV G +  G +SL+  ILFL+G+QL+ IG+LG+Y+++ YLETK RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  321  VK  322
            +K
Sbjct  301  LK  302

667) PRU_2903 in NC_014033


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (627),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 122/301 (41%), Positives = 211/301 (71%), Gaps = 2/301 (0%)

Query  4    VTIILPAYNEESSFELLKERMGEVLKQNPDYNWEFLLVNDGSSDHTLQQMMRLHREDLHY  63
            +++++P +NEE ++ ++   + E    +P Y+ E++++NDGS D T   +  L   D   
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   NYLDLSRNYGKEIAMMAGFDYAKGDAVIVMDADMQHPIDVIPEMLQYWEQGYDDVYATRQ  123
              L ++RN+GKE A+ AG+D A GDAVI +D D+Q+PI+VIP++++ W+ G + V A R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  D-SKESWLKRKTSHWYYEVLQSVTKVPIQKDTGDFRLLDRSCVEALKQMRETERNTKGMY  182
            D S +++LKRKT++W+Y + + ++   I+ + GDFRL+ R  VE +K + E +   KG+ 
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  183  SWIGFRKKGIGYKQLERQTGESKWSTRALMHLALNGIMSYTTAPLRLASVLGLIVSFAAF  242
            SW+G +   + Y + ER +G SK + + L +LAL+GI S++T PLR+ + +GL+V+  +F
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  243  LYLIYIIVITNLYGEPVQGYPTMMVTilflggiqllslgilgEYVAKIFNEVKGRPGYFL  302
            LY   +I+ T ++G+PV+GYP+++V+ILFLGG+QL+++G+LGEY+++I+ E K+RP Y+L
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  303  N  303
            +
Sbjct  302  K  302

668) SMUGS5_09305 in NC_018089


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (627),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 124/308 (41%), Positives = 200/308 (65%), Gaps = 10/308 (3%)

Query  1    MKLSIVVAFYNEEKMIEKTHSEISKQLQLMQPDTIDEYELVYINDGSKDKTLSLMKQMAQ  60
            MK+S+VV+ +NEE  I      + +++Q ++P  +   E+V+INDGSKD T S+++ +A 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTV-REFQELKPYEV---EIVFINDGSKDATESIINALAV  56

Query  61   NDHHVRFISFSRNFGREGAILSGLKYATGDAVMLMDGDLQHPPALIPSFVAAFKEGYDVV  120
            +D  V  +SF+RNFG+E A+++GL  A+GDAV+ +D DLQ+P  +IP ++   + G ++V
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMV  116

Query  121  SGQR-DRKGEPKQSTFFARLFYRFANHLMDVQLTDGISEFKLFSRKAVDTILALPEYNRF  179
             ++R DR  + +     A  FY++ N +   ++ + +++F+L SR  V+ I  LPE N F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  180  SKGIFSWIGFKEKIIPYQNQVREAGESKFGFRRSMNYAFQGIISFNDKPLRICIQFGLAC  239
             KGI+SW+G +  ++ Y    R AG SKF  ++  N A++GI SF+  PLR+   +GL  
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  240  VGFALLYLLVMFIAY--FVKPEILVSGYFTTLAAIILFSGVQLISIGVLGEYIGKIYYEV  297
             ++++LY   M+I    F +P   V GY + L +I++++GVQLI+IGVLGEYIG+IY E 
Sbjct  237  ASISFLYGAWMIIDTLVFGNP---VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  298  KRRPHYIV  305
            K RP YI+
Sbjct  294  KSRPKYIL  301

669) BSA_15580 in NC_021485


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (629),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 206/307 (68%), Gaps = 8/307 (2%)

Query  4    LSVIVPCYNEQETVSTFLTEIKKVESEMARYTHFEYIFVNDGSTDRTLELLKKAAKQFDN  63
            +S++VP +NE+E+++ F   ++  + E+  Y + E +F+NDGS D T  +++  A     
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPY-EVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKDAALLAGLEHTTGDFITVMDVDLQDPPTLLPEMYLKLQEGYDIVATRR  123
            V  LSF+R+FGK++AL+AGL+H++GD +  +DVDLQDP  ++P++  K Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  KDRKGEPLIRSLFAKLFYKLINQVSDTKMVDGARDFRLMTKQVVDSILELNEVNRFSKGI  183
             DR  +  ++   A  FYKL N++S  K+ +   DFRLM+++VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWIGYDVAYISYENRERIAGKT---SWSFFNLLKYSLDGFINFSEIPLAIATWIGTLSS  240
            +SW+G +   + Y   ER+AG +   +W + NL   +L+G+ +FS +PL + T IG + +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  VLSLLAIIFIIIRKLLFGDPVSGWASTVTIVLFMggiqllslgiigKYISKIFLETKKRP  300
             +S+L    +II  L+FG+PV G +S +  +LF+GG+QL+++G++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  VYIVKEE  307
             YI+K  
Sbjct  298  KYILKKG  304

670) SAG1479 in NC_004116


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (629),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 206/307 (68%), Gaps = 8/307 (2%)

Query  4    LSVIVPCYNEQETVSTFLTEIKKVESEMARYTHFEYIFVNDGSTDRTLELLKKAAKQFDN  63
            +S++VP +NE+E+++ F   ++  + E+  Y + E +F+NDGS D T  +++  A     
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPY-EVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKDAALLAGLEHTTGDFITVMDVDLQDPPTLLPEMYLKLQEGYDIVATRR  123
            V  LSF+R+FGK++AL+AGL+H++GD +  +DVDLQDP  ++P++  K Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  KDRKGEPLIRSLFAKLFYKLINQVSDTKMVDGARDFRLMTKQVVDSILELNEVNRFSKGI  183
             DR  +  ++   A  FYKL N++S  K+ +   DFRLM+++VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWIGYDVAYISYENRERIAGKT---SWSFFNLLKYSLDGFINFSEIPLAIATWIGTLSS  240
            +SW+G +   + Y   ER+AG +   +W + NL   +L+G+ +FS +PL + T IG + +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  VLSLLAIIFIIIRKLLFGDPVSGWASTVTIVLFMggiqllslgiigKYISKIFLETKKRP  300
             +S+L    +II  L+FG+PV G +S +  +LF+GG+QL+++G++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  VYIVKEE  307
             YI+K  
Sbjct  298  KYILKKG  304

671) SAK_1509 in NC_007432


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (629),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 206/307 (68%), Gaps = 8/307 (2%)

Query  4    LSVIVPCYNEQETVSTFLTEIKKVESEMARYTHFEYIFVNDGSTDRTLELLKKAAKQFDN  63
            +S++VP +NE+E+++ F   ++  + E+  Y + E +F+NDGS D T  +++  A     
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPY-EVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKDAALLAGLEHTTGDFITVMDVDLQDPPTLLPEMYLKLQEGYDIVATRR  123
            V  LSF+R+FGK++AL+AGL+H++GD +  +DVDLQDP  ++P++  K Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  KDRKGEPLIRSLFAKLFYKLINQVSDTKMVDGARDFRLMTKQVVDSILELNEVNRFSKGI  183
             DR  +  ++   A  FYKL N++S  K+ +   DFRLM+++VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWIGYDVAYISYENRERIAGKT---SWSFFNLLKYSLDGFINFSEIPLAIATWIGTLSS  240
            +SW+G +   + Y   ER+AG +   +W + NL   +L+G+ +FS +PL + T IG + +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  VLSLLAIIFIIIRKLLFGDPVSGWASTVTIVLFMggiqllslgiigKYISKIFLETKKRP  300
             +S+L    +II  L+FG+PV G +S +  +LF+GG+QL+++G++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  VYIVKEE  307
             YI+K  
Sbjct  298  KYILKKG  304

672) rgpI in NC_018646


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (629),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 206/307 (68%), Gaps = 8/307 (2%)

Query  4    LSVIVPCYNEQETVSTFLTEIKKVESEMARYTHFEYIFVNDGSTDRTLELLKKAAKQFDN  63
            +S++VP +NE+E+++ F   ++  + E+  Y + E +F+NDGS D T  +++  A     
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPY-EVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKDAALLAGLEHTTGDFITVMDVDLQDPPTLLPEMYLKLQEGYDIVATRR  123
            V  LSF+R+FGK++AL+AGL+H++GD +  +DVDLQDP  ++P++  K Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  KDRKGEPLIRSLFAKLFYKLINQVSDTKMVDGARDFRLMTKQVVDSILELNEVNRFSKGI  183
             DR  +  ++   A  FYKL N++S  K+ +   DFRLM+++VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWIGYDVAYISYENRERIAGKT---SWSFFNLLKYSLDGFINFSEIPLAIATWIGTLSS  240
            +SW+G +   + Y   ER+AG +   +W + NL   +L+G+ +FS +PL + T IG + +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  VLSLLAIIFIIIRKLLFGDPVSGWASTVTIVLFMggiqllslgiigKYISKIFLETKKRP  300
             +S+L    +II  L+FG+PV G +S +  +LF+GG+QL+++G++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  VYIVKEE  307
             YI+K  
Sbjct  298  KYILKKG  304

673) SAIL_15400 in NC_021507


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (629),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 206/307 (68%), Gaps = 8/307 (2%)

Query  4    LSVIVPCYNEQETVSTFLTEIKKVESEMARYTHFEYIFVNDGSTDRTLELLKKAAKQFDN  63
            +S++VP +NE+E+++ F   ++  + E+  Y + E +F+NDGS D T  +++  A     
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPY-EVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKDAALLAGLEHTTGDFITVMDVDLQDPPTLLPEMYLKLQEGYDIVATRR  123
            V  LSF+R+FGK++AL+AGL+H++GD +  +DVDLQDP  ++P++  K Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  KDRKGEPLIRSLFAKLFYKLINQVSDTKMVDGARDFRLMTKQVVDSILELNEVNRFSKGI  183
             DR  +  ++   A  FYKL N++S  K+ +   DFRLM+++VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWIGYDVAYISYENRERIAGKT---SWSFFNLLKYSLDGFINFSEIPLAIATWIGTLSS  240
            +SW+G +   + Y   ER+AG +   +W + NL   +L+G+ +FS +PL + T IG + +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  VLSLLAIIFIIIRKLLFGDPVSGWASTVTIVLFMggiqllslgiigKYISKIFLETKKRP  300
             +S+L    +II  L+FG+PV G +S +  +LF+GG+QL+++G++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  VYIVKEE  307
             YI+K  
Sbjct  298  KYILKKG  304

674) stu1485 in NC_006448


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (629),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 135/306 (45%), Positives = 211/306 (69%), Gaps = 8/306 (2%)

Query  1    MTISVVIPCFNEEDSIPFFYSEMERIQIEMKK-KFEYIFINDGSTDNTLSVLRRLNASNP  59
            M IS+V+P FNEE++IP FY  +  +Q E+K    E +FINDGS D T S++  L  S+P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQ-ELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   NVHYLSFSRNFGKEAALYAGLQRATGDYVTVMDADLQDPPELLIEMYAKIQEGYDVVGTR  119
             V  LSF+RNFGKE+AL+AGL++A+GD V  +D DLQDP E++ ++  K Q G ++V ++
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RADRKGEPPIRSFFAKAFYWLINKISDTEMVDGARDFRLMTRQVVDAILELKEVNRFSKG  179
            R+DR  +  ++   A  FY L NKIS   + +   DFRLM+R+VV+ I  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  180  LFSWVGFDVAYVSYENCERVAGETSWSFWKLLNYSLDGFINFSEVPLKLATWAGTFSFLI  239
            ++SWVG +   V Y   ERVAG +  + WKL N +L+G+ +FS  PL++  W+  +++++
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WT-YIGLFV  236

Query  240  SLVGIFF---VVIRKLTIGGSVAGWASLVSiilfiggiqllalgiigNYISKIFLETKKR  296
            + +++++   ++I  L +G +V G +SL+  ILF+GG+QL+++G++G+YI++I+LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  297  PVYIVK  302
            P YI+K
Sbjct  297  PKYILK  302

675) SOR_0607 in NC_015291


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (630),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 131/308 (43%), Positives = 208/308 (68%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQSVEALLPDLGA-EVEYVFVDDGSSDGTLELLKTYREQNP  59
            M IS++VP +NEEE +P+FY++V  +  +L + EVE VF++DGS D+T  ++++    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVRYVSFSRNFGKEAALYAGLQHATGDLVVVMDADLQDPPSMLLEMKALLDQNADIDCVG  119
             V  +SF+RNFGKE+AL+AGL+HA+GD V+ +D DLQDP  ++ ++    +  A++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCANLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILTLTESNRFS  179
            ++R+ R  +  ++   A+ FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGILNFSDFPLSIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSFVMTVFVVFRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +SF+    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLVK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

676) Vapar_5572 in NC_012792


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (629),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 116/269 (44%), Positives = 190/269 (71%), Gaps = 1/269 (0%)

Query  62   EIIVVDDGSTDDTAAVAQAWCELTGFRC-ICLSRNFGKEaalsaglaaaagdavvvldgd  120
            EI+ ++DGS D T ++ +A      +   + ++RNFGKE+AL AGL  A+GDAV+ +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  121  LQHSPSLIRAMLDHWKAGAEVVYAVRQERSDESRLKQIGSRIFYRLLNASDRFAVPQDAG  180
            LQ++  +I  +++ W+AGAE+V A R +RS ++RLK+  +  FY+L N      + ++ G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  181  DFRLMDRRVVDALTSLPERSRFMKGLYAWVGFRAVAMPYTPRPRAAGASSFNARRLFALA  240
            DFRLM R VV+ +  LPER+ FMKG+ +WVG ++  + Y    R AG S FN+++L  LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  241  IDGLTAFTTWPLRMVSVVGLLFAVPALSYGAYVVLDHLMFGNPVSGWSTIVVSLMFFIGV  300
            ++G+T+F+T PLR+ + +GL+ A  ++ YGA +++D L+FGNPV G ++++VS++F+ GV
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  301  QMIFTGIVGEYVARIYEEVKGRPLYVVRR  329
            Q+I  G++GEY++RIY E K+RP Y++++
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILKK  303

677) gbs1545 in NC_004368


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (628),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 206/307 (68%), Gaps = 8/307 (2%)

Query  4    LSVIVPCYNEQETVSTFLTEIKKVESEMARYTHFEYIFVNDGSTDRTLELLKKAARQFDN  63
            +S++VP +NE+E+++ F   ++  + E+  Y + E +F+NDGS D T  +++  A     
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPY-EVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VHYLSFSRHFGKDAALLAGLEHTTGDFITVMDVDLQDPPTLLPEMYLKLQEGYDIVATRR  123
            V  LSF+R+FGK++AL+AGL+H++GD +  +DVDLQDP  ++P++  K Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  KDRKGEPLIRSLFAKLFYKLINQVSDTKMVDGARDFRLMTKQVVDSILELNEVNRFSKGI  183
             DR  +  ++   A  FYKL N++S  K+ +   DFRLM+++VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWIGYDVAYISYENRERIAGKT---SWSFFNLLKYSLDGFINFSEIPLAIATWIGTLSS  240
            +SW+G +   + Y   ER+AG +   +W + NL   +L+G+ +FS +PL + T IG + +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  VLSLLAIIFIIIRKLLFGDPVSGWASTVTIVLFMggiqllslgiigKYISKIFLETKKRP  300
             +S+L    +II  L+FG+PV G +S +  +LF+GG+QL+++G++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  VYIVKEE  307
             YI+K  
Sbjct  298  KYILKKG  304

678) uc509_1851 in NC_019435


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  170 bits (628),  Expect = 9e-44, Method: Compositional matrix adjust.
 Identities = 135/310 (44%), Positives = 212/310 (69%), Gaps = 12/310 (3%)

Query  5    KLSIIVPAYNEEETLEIFLNEVNKQSVEL-PLEKTYFFINDGSTDNTLEVLKNLTTKYDN  63
            K+S++VP +NEEE++ +F + V ++  EL P E    FINDGS D T  +++ L+     
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VKYISFSRNFGKEAALIAGLEVSDGDFVTVMDADLQDPPEMLNEMFTKITEGYDVVGTRR  123
            V  +SF+RNFGKE+AL+AGL+ + GD V  +D DLQDP E++ +++ K   G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  VSRVGEPPIRSFFAKTFYKLINKISDTEMVDGVRDFRLMTRQVVDSILELKENNRFSKGI  183
              R  +  ++   A  FYKL NKIS   + + V DFRLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGFKTTYLPYENRERVAGTT---SWNFFGLVKYSIDGIVNFSEAPLNIATFVGFISF  240
            +SWVG +T  + Y   ERVAG +   +W++  L   +++GI +FS  PL + T++G+  F
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL--F  235

Query  241  LASV--LLSVFYLLKTLVFGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKK  298
            +AS+  L +   ++ TLVFG+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  299  RPNYIIKESN  308
            RP+YI+K + 
Sbjct  296  RPKYILKKGR  305

679) GTCCBUS3UF5_23250 in NC_016593


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  169 bits (626),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 127/308 (42%), Positives = 194/308 (63%), Gaps = 14/308 (4%)

Query  5    SVIIPVYNEALVIRETYRRLKTVME-QTYEPYELLFINDGSTDETLEILRELAVKDDTMK  63
            S+++PV+NE   I   Y+ ++   E + YE  E++FINDGS D T  I+  LAV D  + 
Sbjct  4    SLVVPVFNEEEAIPVFYKTVREFQELKPYEV-EIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   YIDFSRNFGHQIAITAGMDYASGQAIIVIDADLQDPPELILEMIERWKEGYEVVYARRVK  123
             + F+RNFG + A+ AG+D ASG+A+I ID DLQDP E+I ++IE+W+ G E+V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  RKGETVFKRWTAYVFYRLLRAATEIDIPVDTGDFRLIDRKVCDQLRYMRERSRFVRGLVS  183
            R  +  +KR TA  FY+L    +   I  + GDFRL+ R V ++++ + ER+ F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  184  WVGFRQTAVEYEREPRFAGETKYPLKKMIRFSLDGITSFSYKPLKLASWLGFLLSAASVV  243
            WVG +   VEY R  R AG +K+   K+  ++L+GITSFS  PL++ + +G+++++ S  
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS--  240

Query  244  GMFVVLYLKWFAHST------VAGWASLLMVMLLGNGVTLLMLGAIGEYIGRIYDEVKER  297
                 LY  W    T      V G +SLL+ +L+  GV L+ +G +GEYIGRIY E K R
Sbjct  241  ----FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  298  PLYIVNET  305
            P YI++  
Sbjct  297  PKYILKKG  304

680) csbB in NC_013928


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  169 bits (626),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 124/308 (41%), Positives = 200/308 (65%), Gaps = 10/308 (3%)

Query  1    MKLSIVVAFYNEEKMIEKTHSEISKQLQLMQPDTIDEYELVYINDGSKDKTLSLMKQMAQ  60
            MK+S+VV+ +NEE  I      + +++Q ++P  +   E+V+INDGSKD T S+++ +A 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTV-REFQELKPYEV---EIVFINDGSKDATESIINALAV  56

Query  61   NDHHVRFISFSRNFGREGAILSGLKYATGDAVMLMDGDLQHPPALIPSFVTAFKEGYDVV  120
            +D  V  +SF+RNFG+E A+++GL  A+GDAV+ +D DLQ+P  +IP ++   + G ++V
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMV  116

Query  121  SGQR-DRKGEPKQSTFFARLFYRFANHLMDVQLTDGISEFKLFSRKAVDTILALPEYNRF  179
             ++R DR  + +     A  FY++ N +   ++ + +++F+L SR  V+ I  LPE N F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  180  SKGIFSWIGFKEKIIPYQNQVREAGESKFGFRRSMNYAFQGIISFNDKPLRICIQFGLAC  239
             KGI+SW+G +  ++ Y    R AG SKF  ++  N A++GI SF+  PLR+   +GL  
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  240  VGFALLYLLVMFIAY--FVKPEILVSGYFTTLAAIILFSGVQLISIGVLGEYIGKIYYEV  297
             ++++LY   M+I    F +P   V GY + L +I++++GVQLI+IGVLGEYIG+IY E 
Sbjct  237  ASISFLYGAWMIIDTLVFGNP---VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  298  KRRPHYIV  305
            K RP YI+
Sbjct  294  KSRPKYIL  301

681) csbB in NC_004350


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  169 bits (626),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 124/308 (41%), Positives = 200/308 (65%), Gaps = 10/308 (3%)

Query  1    MKLSIVVAFYNEEKMIEKTHSEISKQLQLMQPDTIDEYELVYINDGSKDKTLSLMKQMAQ  60
            MK+S+VV+ +NEE  I      + +++Q ++P  +   E+V+INDGSKD T S+++ +A 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTV-REFQELKPYEV---EIVFINDGSKDATESIINALAV  56

Query  61   NDHHVRFISFSRNFGREGAILSGLKYATGDAVMLMDGDLQHPPALIPSFVTAFKEGYDVV  120
            +D  V  +SF+RNFG+E A+++GL  A+GDAV+ +D DLQ+P  +IP ++   + G ++V
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMV  116

Query  121  SGQR-DRKGEPKQSTFFARLFYRFANHLMDVQLTDGISEFKLFSRKAVDTILALPEYNRF  179
             ++R DR  + +     A  FY++ N +   ++ + +++F+L SR  V+ I  LPE N F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  180  SKGIFSWIGFKEKIIPYQNQVREAGESKFGFRRSMNYAFQGIISFNDKPLRICIQFGLAC  239
             KGI+SW+G +  ++ Y    R AG SKF  ++  N A++GI SF+  PLR+   +GL  
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  240  VGFALLYLLVMFIAY--FVKPEILVSGYFTTLAAIILFSGVQLISIGVLGEYIGKIYYEV  297
             ++++LY   M+I    F +P   V GY + L +I++++GVQLI+IGVLGEYIG+IY E 
Sbjct  237  ASISFLYGAWMIIDTLVFGNP---VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  298  KRRPHYIV  305
            K RP YI+
Sbjct  294  KSRPKYIL  301

682) MCA2193 in NC_002977


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  169 bits (624),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 126/308 (41%), Positives = 220/308 (72%), Gaps = 9/308 (2%)

Query  3    TLGIVVPCFNEEEALPETTRRLAVVLNDLQEKGKIGP-DSRVYFVDDGSRDGTWQSIRGL  61
             +++VVP FNEEEA+P       V  + ++E   + P +  + F++DGS+D+T   I +L
Sbjct  2    KISLVVPVFNEEEAIP-------VFYKTVREFQELKPYEVEIVFINDGSKDATESIINAL  54

Query  62   AETYGFVRGMKLSRNQGHQSALLAGLMHARGDCLVSIDADLQDDLTAIESMLDAHAAGAD  121
            A +  +V  + ++RN G ++AL+AGL HA GD +++ID DLQD +  I  +++   AGA+
Sbjct  55   AVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAE  114

Query  122  IVYGVRKNRKTDSLFKRWSAEWYYRVLALMGVEVVFNH-ADYRLMSRRAIDALREFGEVN  180
            +V + R +R TD+ +KR +AEW+Y++   ++   + ++ +D+RLMSR  ++ ++ + E N
Sbjct  115  MVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  181  LFLRGIIPKLGFNTATVYYDRAERIAGESKYPLRKMLGLALQGVTSFSVFPLRVITFLGF  240
            LF++GI++ +G +T  V Y RAER+AG SK+  +K+  LAL+G+TSFS FPLRV T++G+
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  241  LISAVSFLVVCWVLWVRFVAGEAVPGWSSILLPMsllggiqllslgvigEYLGKIYLETK  300
            +++++SFL   W++   +V G++V G +S+L+++ +LGG+QL+++GV+GEY+G+IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  301  RRPRYFIQ  308
             RP+Y+++
Sbjct  295  SRPKYILK  302

683) csbB in NC_017768


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  169 bits (624),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 124/308 (41%), Positives = 200/308 (65%), Gaps = 10/308 (3%)

Query  1    MKLSIVVAFYNEEKMIEKTHSEISKQLQLMQPDTIDEYELVYINDGSKDKTLSLMKQMAK  60
            MK+S+VV+ +NEE  I      + +++Q ++P  +   E+V+INDGSKD T S+++ +A 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTV-REFQELKPYEV---EIVFINDGSKDATESIINALAV  56

Query  61   NDHHVRFISFSRNFGREGAILSGLKYATGDAVMLMDGDLQHPPALIPSFVTAFKEGYDVV  120
            +D  V  +SF+RNFG+E A+++GL  A+GDAV+ +D DLQ+P  +IP ++   + G ++V
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMV  116

Query  121  SGQR-DRKGEPKQSTFFARLFYRFANHLMDVQLTDGISEFKLFSRKAVDTILALPEYNRF  179
             ++R DR  + +     A  FY++ N +   ++ + +++F+L SR  V+ I  LPE N F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  180  SKGIFSWIGFKEKIIPYQNQVREAGESKFGFRRSMNYAFQGIISFNDKPLRICIQFGLAC  239
             KGI+SW+G +  ++ Y    R AG SKF  ++  N A++GI SF+  PLR+   +GL  
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  240  VGFALLYLLVMFIAY--FVKPEILVSGYFTTLAAIILFSGVQLISIGVLGEYIGKIYYEV  297
             ++++LY   M+I    F +P   V GY + L +I++++GVQLI+IGVLGEYIG+IY E 
Sbjct  237  ASISFLYGAWMIIDTLVFGNP---VRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  298  KRRPHYIV  305
            K RP YI+
Sbjct  294  KSRPKYIL  301

684) 2SCK8.01; SCK20.16 in NC_003888


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  169 bits (625),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 126/308 (41%), Positives = 202/308 (66%), Gaps = 10/308 (3%)

Query  1    MLISIVAPCYNEEDVIERFHAAVQKVADDLLPLGHDMEFVYVDDGSRDRTLTLLEQLAEH  60
            M IS+V P +NEE+ I  F  +V+   ++L P   ++E+V+++DGS+D T ++++ LA  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKP--YEVEIVFINDGSKDATESIINALAVS  57

Query  61   DPRVRYVSFSRNFGKEAALLAGLRHSSGDSVVVMDADLQHPPELIGRMVELRDEGYDQVL  120
            DP V  +SF+RNFGKE+AL+AGL H+SGD+V+ +D DLQ+P E+I +++E ++ G + VL
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVL  117

Query  121  ArrsrrgdrftrT-LTARLYYRLVNRlvdvelvdgvgdFRLLSRRVVDAVLGLTEYNRFS  179
            A+RS R+        TA  +Y+L N++    + + VGDFRL+SR VV+ +  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFPSTTFEYENAVREHGSS---SWSLKSLLNYGLDGLLSFNNRPLRAALHLGM  236
            KG+++WVG  +   EY  A R  G S   +W L +L   +L+G+ SF+  PLR    +G+
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  VLLTCAGLYTAWIVGAALVNGVETPGYVTIITVVTALAGVQMVMLGVVGEYTGRIYYEVK  296
             + + + LY AW++  +LV G    GY +++  +  L+GVQ++ +GV+GEY GRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  GRPHFLVK  304
            +RP +++K
Sbjct  295  SRPKYILK  302

685) SynWH7803_0218 in NC_009481


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 136/308 (45%), Positives = 207/308 (68%), Gaps = 13/308 (4%)

Query  9    VVAACFNEEAVIVRFIERVLAVPGVD----HLVLIDDGSRDATRDQIRTFLAQRRSLGVP  64
            +V + FNEE  I  F   V     +     ++V+I+DGS+DAT   I + LA   +L VP
Sbjct  5    LVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINA-LAVSDPLVVP  63

Query  65   VPVTLLELTRNFGKEAAMLAGLDHVRERCEAAVLIDSDLQHPPELIEAMVSEWRAGAEVV  124
                 L +TRNFGKE+A++AGLDH     +A + ID DLQ+P E+I  ++  W+AGAE+V
Sbjct  64   -----LSFTRNFGKEPALFAGLDHASG--DAVIPIDVDLQDPIEVIPHLIEKWQAGAEMV  116

Query  125  TAVRDDRDQESRLKVLSASWFYRVFNKVVDSIQLQEGAGDYRLLDVAVVDAFTRLRESSR  184
             A R DR  ++RLK  +A WFY++ NK+  + +++E  GD+RL+   VV+ +  L E + 
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTP-KIEENVGDFRLMSREVVENIKLLPERNL  175

Query  185  FSKGLLPWTGYRSVELPYQRVSRVGGTTSWSPLKLIGYAFDGIFSFSVLPLKVWTglgvl  244
            F KG+L+W G ++  + Y R  RV+G +  +  KL   A++GI SFS +PL+VWT +G++
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLF  235

Query  245  vsgisllYALLIALRTALVGRDVPGYASLMVAVLFlggiqligigvlgDYIGRIYVESKA  304
            V++IS+LY+  + + T + G  V GY+SL+V++LFLGG+QLIGIGVLG+YIGRIY+E+K+
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  305  RPHYFIRS  312
            RP Y+++ 
Sbjct  296  RPKYILKK  303

686) SAB0653 in NC_007622


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (623),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 135/308 (44%), Positives = 204/308 (67%), Gaps = 7/308 (2%)

Query  1    MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT  60
            MKI +V+P FNE E I    + + E+      +K Y+ +++FI+DGS D+T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   IDRHVSFISFSRNFGKEAAMIAGYQYSTEFDAVIMIDCDLQHPPEYIPKMIEGFMEGYDQ  120
             D  V  +SF+RNFGKE+A++AG + ++  DAVI ID DLQ+P E IP +IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYN  179
            V+AKR DRS +   ++  ++ +YKL N  +   ++++ VGDFRL+S+  V +I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGL  239
             F KG++ W+G +T V  Y    R  G SK +  KL N +++G+ SF++ PLR+  Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FIFSISVLYIIYLFINIMISGVNIPGYFSTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ SIS LY   ++I+ ++ G  + GY S + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  ARPKYIIQ  307
            +RPKYI++
Sbjct  295  SRPKYILK  302

687) LM5923_0968 in NC_013768


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

688) LMRG_02032 in NC_017544


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

689) lmo0933 in NC_003210


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

690) LMLG_1421 in NC_017547


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

691) LMKG_02359 in NC_017546


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

692) LMOG_00796 in NC_017545


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

693) BN418_1135 in NC_020557


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

694) BN419_1137 in NC_020558


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

695) LMOSLCC2372_0946 in NC_018588


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

696) LMOSLCC2479_0945 in NC_018589


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

697) LMOSLCC5850_0935 in NC_018592


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

698) LMOSLCC7179_0913 in NC_018593


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

699) M642_02325 in NC_021823


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

700) M639_12980 in NC_021837


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

701) LM5578_1014 in NC_013766


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (621),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 123/298 (42%), Positives = 201/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYKRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   YK + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

702) VAPA_1c12880 in NC_022247


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (620),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 119/268 (45%), Positives = 190/268 (71%), Gaps = 1/268 (0%)

Query  62   EIIVVDDGSTDDTAAVAQAWC-ELPGFRCISLSRNFGKEaaltaglaaaagdavivldgd  120
            EI+ ++DGS D T ++ +A     P    +S++RNFGKE+AL AGL  A+GDAVI +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  121  LQHSPSLIHAMLAQWKAGAEVVYAVRQQRSDESRLKQIGSRLFYKLLNSSDRFVVPKDAG  180
            LQ++  +I  ++ +W+AGAE+V A R +RS ++RLK+  +  FYKL N      +  + G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  181  DFRLMDRKVVDALMSLPERSRFMKGLYAWVGFRAVAMPYTPEPRAEGTSTFNARRLLSLA  240
            DFRLM R VV+ +  LPER+ FMKG+ +WVG ++  + Y    R  G S FN+++L +LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  241  IDGLTAFTTWPLRMVSLVGLLFAVLALSYGAYVILDHLMFGNSVSGWATIVVSLMFFIGV  300
            ++G+T+F+T PLR+ + +GL+ A +++ YGA +I+D L+FGN+V G ++++VS++F+ GV
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  301  QMIFTGIVGEYVARIYEEVKGRPLYVVR  328
            Q+I  G++GEY++RIY E K+RP Y+++
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILK  302

703) Acfer_0817 in NC_013740


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (620),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 128/302 (43%), Positives = 200/302 (67%), Gaps = 0/302 (0%)

Query  2    KKISFVVPVFNEEENIHEFHRRLTQVMAPLPYDYEILFIDDGSRDRTSLLIRELAEKDSH  61
             KIS+VVPVFNEEE I  F + + +     PY+ EI+FI+DGS+D T  +I  LA  D+ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VQGYVFARNFGHQLALTCGLDQSTGDAVISMDGDLQHPPEMVPDLLKKWEEGYEIVQTVR  121
            V    F+RNFG + AL  GLD+++GDAVI++D DLQ+P E++P+L+ KW+ G E+V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  122  KSTEDATWFKSITSRLYYKLINSMSEVRITPGGSDFRLMDRKAVDALNRFRERARFIRGM  181
                   ++K  T+  +YKL N +S  +I    +DFRLM R  V+ ++ + ER  F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  VNNLGFRYTTLEFVAPPRFAGHSKFSLRKMLRFALDGITAFSRVPLRLALYVGCIAGLGS  241
            ++ +G +   +E+V + R AG SKF+ +K+  +AL+GIT+FS  PLR+  Y+G + +  S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  ILLIGHVIYVKYIVQDAVPGWTTLAAAEFFlggveligigivgeyvgRIFDEVKQRPLYI  301
            +L  + +I    +  ++V G  +L  + +FLGGV+LIGIG++GEY+GRI+ E K RP YI
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  302  IR  303
            ++
Sbjct  301  LK  302

704) TKWG_06770 in NC_017964


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  168 bits (620),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 113/269 (43%), Positives = 187/269 (70%), Gaps = 0/269 (0%)

Query  74   EIIVVDDGSTDDTPAFMSEVCQREDRVRYLQLSRNFGKEAALSAGLELAVGQVVVTLDAD  133
            EI+ ++DGS D T ++++ +   +  V  L ++RNFGKE+AL AGL+ A G+ V+ +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  134  LQHPPALIARMVVHWEQGADMVYAVREARADERLLKRIGTRIFYFLMKGTGKIRIEPDAC  193
            LQ+P  +I++++  W+ GA+MV A R  R+ +  LKR  +  FY L +  +  +IE +  
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  194  DFRLMDRKVVQALCQLPERTRFMKGLYAWVGFRTQAVYYQPDERRFGTSRFNLFRLVGHG  253
            DFRLM R VV+ +  LPER  FMKG+ +WVG +T+ V Y   ER  G S+FN  +L   +
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  254  LQGLTAFTTWPlrmamfggmllaglallyglYVIFEYVMVGNPVRGYSTLIVAESFFAGI  313
            L+G+T+F+T PLR+  + G+++A++++LYG  +I++ ++ GNPVRGY++L+V+  F++G+
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  314  ILISVGMVGEYVAHIYEEVKRRPLFIVSK  342
             LI++G++GEY+++IY E K RP +I+ K
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILKK  303

705) SPPN_07880 in NC_015875


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  167 bits (618),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 131/308 (43%), Positives = 206/308 (67%), Gaps = 10/308 (3%)

Query  7    MVISIIVPCLNEEEVLPLFYQALEALIPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  65
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  66   AVHYISFSRNFGKEAALYAGLQYATGDPVVVMDADLQDPPGMLLEMKNLLDQNADLDCVG  125
             V  +SF+RNFGKE+AL+AGL+ A+GD+V+ +D DLQDP  ++ ++ +  +  A++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  126  TRRTSREGEPFFRSFCANLFYCLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNHFS  185
            ++R+ R  +  ++   A+ FY L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  186  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSLRQLFFYSIEGIVNFSDFPLIIAFVAGL  242
            KG+++WVG +T  ++Y   ER AG +   +W L++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  243  LSCFISFVMTVFVVFRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  302
            +   ISF+    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  303  KRPLYLIK  310
             RP Y++K
Sbjct  295  SRPKYILK  302

706) KSE_39670 in NC_016109


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  167 bits (618),  Expect = 7e-43, Method: Compositional matrix adjust.
 Identities = 123/303 (41%), Positives = 198/303 (66%), Gaps = 8/303 (2%)

Query  11   LSVVVPMYNEEDALPSFAARMRPVLDGLGVRYEVVAVDDGSADKTAALLRDLAADWPELR  70
            +S+VVP++NEE+A+P F   +R   +      E+V ++DGS D T +++  LA   P + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  71   MVRLRRNSGHQAALTAGLDHAVGDYVASIDADLQDPPEKIPEMLELARAEGLDIVYGVRE  130
             + + RN G ++AL AGLDHA GD V +ID DLQDP E IP+++E  +  G ++V + R 
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIE-KWQAGAEMVLAKRS  121

Query  131  DRSTDTGFKRWTAGGYYWLMRRLVGRQVPANAGDFRLLSREAVEALKELPDQQRVYRLLV  190
            DRSTD  +KR TA  +Y L  ++   ++  N GDFRL+SRE VE +K LP+++   + ++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  191  PWLGFPSGEVRYVREERVAGSTKYPLAKMVRLALDSVTGFSAAPLRLATWLGTVAFFTCL  250
            +W+G  ++ V YVR ERVAG +K+   K+  LAL+++T+FS+ PLR+  W   +++F   
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--W-TYIGLFVAS  238

Query  251  LLLGFS----LTVYLFGATVPGWTSLFVGLLFIGGIQLICVGLLGEYVARIYTAVQRRPA  306
            + + ++    +   +FG  V G  SL+V++LF+GG+QLI +G+LGEY++RIY   + RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  307  YFI  309
            Y++
Sbjct  299  YIL  301

707) RPE_0870 in NC_008435


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  167 bits (616),  Expect = 9e-43, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 203/304 (67%), Gaps = 13/304 (4%)

Query  24   LVVPVFNEAAGLTHLHERLETLAATLRERHGLR---CEVIYVDDGSADDTLAIARGLNAA  80
            LVVPVFNE  ++  +         T+RE + L+    E+++++DGS D T +I  +L  +
Sbjct  5    LVVPVFNEEEAIPVFYK-------TVREFQELKPYEVEIVFINDGSKDATESIINALAVS  57

Query  81   ALDVQVVSLSRNFGKEAALMAGLDYAGRGAVLFMDGDGQHPPALVEQLVRHWMVDGYDVV  140
               V  +S++RNFGKE+AL AGLD A+ +AV+ +D D Q+P  ++ +L+  W  ++ ++V
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMV  116

Query  141  FTAKAHRDNESWLRRKAVRGFYALLNWGARQKIPEDAGDFRLLSPRAAEALRRMPERNRF  200
            ++ +++R  +++L+RK+   FY L N  +  KI E+ GDFRL+S    E ++ +PERN F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  201  FKGLASWIGFRQIRVDYEPAERVHGITSFNAARLIGLSIEGITSFSVAPLRI-Asllgvl  259
             KG+ SW+G +   V+Y  AERV GI+ FN+ +L  L++EGITSFS  PLR+ + +   +
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  260  lalsaflfglMILWETWIDGQSVPGYPSLMVGMMTIGGVQLLMIGIVGEYIGKILSELKA  319
             ++S +  + MI+ +T + G++V GYPSL+V+++ +GGVQL+ IG++GEYIG+I  E K+
Sbjct  237  ASISFLYGAWMII-DTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  320  RPVY  323
            RP Y
Sbjct  296  RPKY  299

708) SYNW0167 in NC_005070


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (613),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 137/303 (46%), Positives = 206/303 (68%), Gaps = 9/303 (2%)

Query  24   VVAACFNEEAVIIRFIERVLALPQVSR----LLLIDDGSSDATVAVIRAWQQSHPDQGLT  79
            +V + FNEE  I  F   V  + ++      +++I+DGS DAT ++I A   S+P   + 
Sbjct  5    LVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL--VV  62

Query  80   LLELTRNFGKEAAMLAGLDFADGRCGAAVLIDSDLQHPPERIPAMVKAWQEGAEVVTAVR  139
             L +TRNFGKE+A++AGLD A G  +A + ID DLQ+P E IP ++  WQ GAE+V A R
Sbjct  63   PLSFTRNFGKEPALFAGLDHASG--DAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  140  DDSDAEGLMKVATASWFYRVFNRLVDSIQLQEGAGDFRLLSAPVIEAVIQMREATRFSKG  199
             D  ++G +K  TA WFY++ N+ + + +++E  GDFRL+S  V+E +  + E   F KG
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  200  LMPWTGYRSVEIPYSRVARAGGATSWSSLKLWRYALDGIFSFSVKPLKVWgligllislf  259
            +++W G ++  + Y R  R +G +  ++ KLW  AL+GI SFS  PL+VW  IGL+++ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  260  sflYAALIVLRTVVFGVDLPGYASLIVAilflggiqligigvlgEYIGRIYIDVKRRPHY  319
            SFLY+A +++ T+VFG  + GY+SL+V+ILFLGG+QLIGIGVLGEYIGRIY++ K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  320  FIR  322
            +++
Sbjct  300  ILK  302

709) SBI_01024 in NC_016582


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (612),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 130/309 (43%), Positives = 203/309 (66%), Gaps = 11/309 (3%)

Query  15   MLISIVVPCYNEEAVIDRFHEHLTRELRAIDH-DCEFVYVDDGSKDRTLSLLKNLAETDP  73
            M IS+VVP +NEE  I  F   + RE++ +   + E+V+++DGSKD T S+++ LA +DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  74   RVRYVSFSRNFGKEAAMLAGLRYASGDAVVIMDADLQHPPELVKRMVELHAQGHDQVIAK  133
             V  +SF+RNFGKE+A++AGL  ASGDAV+ +D DLQ+P E++ +++E    G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  134  RT--RDGDRVTRVLTARAYYRLINRFVDVELVDGVGDFRLLSRRAVDAVLGLTEYNRFSK  191
            R+    ++R+ R  + + +Y+L N++    + + VGDFRL+SR  V+ +  L E N F K
Sbjct  120  RSDRSTDGRLKRKTAEW-FYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  192  GLFAWVGFPSVTFEYENAVREEGRSK---WTFGQLLNYGADGLISFNNKPLRaavylgll  248
            G+++WVG  +   EY  A R  G SK   W   +L N + +G+ SF+  PLR   Y+GL+
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGW---KLWNLALEGITSFSTFPLRVWTYIGLF  235

Query  249  llsvaalyaaWIVGSAAVNGVDTPGYVTLLVVITALAGVQMVMVGVIGEYIGRIYYEVKR  308
            + S++ LY+AW++  + V G    GY +LLV I  L+GVQ++ +GV+GEYIGRIY E K 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  309  RPHFLVQST  317
            RP ++++  
Sbjct  296  RPKYILKKG  304

710) LMOSLCC2755_0934 in NC_018587


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (612),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 122/298 (41%), Positives = 200/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYGRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   Y  + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

711) LMOSLCC2482_0978 in NC_018591


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (612),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 122/298 (41%), Positives = 200/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYGRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   Y  + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

712) LMOSLCC2540_0932 in NC_018586


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (612),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 122/298 (41%), Positives = 200/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYGRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   Y  + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

713) M637_07335 in NC_021824


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (612),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 122/298 (41%), Positives = 200/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYGRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   Y  + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

714) M643_14980 in NC_021826


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (612),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 122/298 (41%), Positives = 200/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYGRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   Y  + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

715) M641_09160 in NC_021838


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (612),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 122/298 (41%), Positives = 200/298 (68%), Gaps = 4/298 (1%)

Query  10   IVPVFNEEEVLLKTYGRLTEVMQTLDGPYE--IIFVNDGSRDLTKSMLQKLSAEDSCVKA  67
            +VPVFNEEE +   Y  + E  Q L  PYE  I+F+NDGS+D T S+++ L+  D+ V +
Sbjct  6    VVPVFNEEEAIPVFYKTVRE-FQELK-PYEVEIVFINDGSKDATESIINALAVSDPLVVP  63

Query  68   IHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDPPELIIEMVEKWKEGYQVVYAQRLKR  127
            + F+RNFG + A+ AG + A G AVI ID DLQDP E+I +++EKW+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  128  KGETFFKKQSASLFYRILTKLTDINIPVDTGDFRLMDAQVCRELAGLHEKNPFVRGQVSW  187
              +  +K+++A  FY++  K++  +I  + GDFRLM  +V  ++  L E+N F++G +SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  188  LGFKQTALHYERDERAAGETKYPLKKMIKLSIDGITSFSYRPLKLASYLGVLTAFIGFIY  247
            +G +   ++Y R ER AG +K+   K+ +L+++GITSFS  PL++ +Y+G++ A I+F+Y
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLY  243

Query  248  LIIVLFQRFFTDTTLTGWTSIIILQlvfggtilfilgligEYIGRIYDEVKDRPLYII  305
               ++++ +  +  + G  S+++  L +GG  L+ +G++GEYIGRIY E K RP YI+
Sbjct  244  GAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

716) rfaG3 in NC_015697


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  166 bits (615),  Expect = 9e-43, Method: Compositional matrix adjust.
 Identities = 130/310 (42%), Positives = 197/310 (64%), Gaps = 9/310 (2%)

Query  3    KLSIAVPCYNEEETIPLFYPAVEKVVKQMPVETEYWFINDGSSDGTLTELRKLHTQDPER  62
            K+S+ VP +NEEE+IP+FY +V       P E E  FINDGS D+T + +  L   DP  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  63   VHYVSFSRNFGKEAGLYAGLQAATGDYVVVMDADLQDPPEYLPEMYKDISTGEYDCVGMR  122
            V  +SF+RNFGKE++L+AGL+ A+GD V+ +D DLQDP E +P++     +G  + V  +
Sbjct  62   VP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  123  RIDRKGEAKFKSFLSNQFYNVINKISDTKIVSGARDYRMMTRQMVDAVLSLTEYNRFSKG  182
            R DR  ++++K   ++ FY++ NKIS  KI     D+R+M+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFNWVGFRTKYLPYKNVERVAGTTDWSTWKLFKYAIDGITDFSEaplai---atlagglt  239
            I++WVG +T  + Y   ERVAG +  + WKL + A++GIT FS  PL +     L  +  
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  240  aFisiigmiiviirkiVEPGSSAFGWASMVCIILFLGGIQLLCLGIVGRYIGRIYMQTKK  299
            +F+    MII  +      G++  G +S++  ILFLGG+QL+ +G++G YIGRIY++TK 
Sbjct  240  SFLYGAWMIIDTLVF----GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  300  RPIYIIKEKK  309
            RP YI+K  +
Sbjct  296  RPKYILKKGR  305

717) Niako_6502 in NC_016609


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  165 bits (611),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 126/303 (42%), Positives = 206/303 (68%), Gaps = 3/303 (0%)

Query  5    VSIIVPVHNERENVTVMAKAIKRTFADL-PYRYNLLFVDDGSSDLTLHEVKKLALQDDHV  63
            +S++VPV NE E + V  K++ R F +L PY  +++F++DGS D T   ++ LA+ D  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   RYISFSRNFGHQAAIKAGLDKADGDCVITMDGDMQHPPSLIPTLLEKWEEGYDVVYTVRK  123
              +SF+RNFG ++A+ AGLD A GD VI +D D+Q+P  +IP L+EKW+ G ++V + R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  EDKKLPFLKRATSNLFYTILNWLSDIKIEKGTADFRLMNRNVVDVLRGLAEFEPFFRGLV  183
            +      LKR T++ FY + N +S  KIE   +DFRLM+R+VV+ ++ L+E + F +G++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  KWAGFKQEPVEYEPNERRSGASKYTSKKMIKFALQGITSFSIRPLYAATYIGFTFAALST  243
             W G + + VEY   ER +G SK+ + K+ ++AL+GITSFS  PL   TYIG+  A++S 
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  LYIPYALY-SYYFGYTISGWSSLIVTVVFFgglqlmilgiigiylgklFMQNKHRPVYIV  302
            LY +  +  +  FG  + G +SL+V+++F+GG+QL+ +G++G Y+G+++++ K RP YI+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  303  KES  305
            K +
Sbjct  302  KKG  304

718) RSPPHO_01842 in NC_017059


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  165 bits (611),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 121/302 (41%), Positives = 207/302 (69%), Gaps = 6/302 (1%)

Query  37   VSVVVPMHNESLSLEALFARLSPVLDRVGEPAEIVCVDDGSTDDTLERLKALRLREPRVR  96
            +S+VVP+ NE  ++  ++  +    +      EIV ++DGS D T   ++AL + +P V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  97   VVALSRNFGKEaalaaglqrargqaVVLMDADLQHPPELIEAFVQHWREGWPVVFGQRTS  156
             ++++RNFGKE+AL AGL++A G+AV+ +D DLQ+P E+I  +++ W+ G  +V+++R+ 
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  157  RKTDTWLRRWAARSFYRVFAAISQTHLPAGAGDFRLMDRRAVDALNTLVERTRFTKGLYA  216
            R TD +L+R +A  FY++   IS   +    GDFRLM R  V+ ++ L ER  F KG+ +
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  217  WIGFRSLAVPFEVGERAGGTS---GWRLGALWRFAVDAITAFSTLPLRMWTYVGTAVSLC  273
            W+G ++  V +  +ER +G S   GW+L   W +A+++IT+FST+PLR+WTY+G  V+  
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKL---WNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  274  ALIYAAHFLIRTLLYGVDLPGFPSLIIAITFFAGVQliglgiigeylgRVFTEVKQRPLF  333
            +++Y+A  +I TL++G  + G+PSL+++I F++GVQLIG+G++GEY+GR++ E K RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  334  LV  335
            ++
Sbjct  300  IL  301

719) C270_02970 in NC_018673


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (606),  Expect = 4e-42, Method: Compositional matrix adjust.
 Identities = 128/304 (43%), Positives = 210/304 (70%), Gaps = 1/304 (0%)

Query  4    LSIIVPVHNEEETIEIFYNTVEKFKKEIAAVIHYHFIDDGSTDKTISILRQLSATNDNVH  63
            +S++VPV NEEE+I +FY+TV  F+   +  ++  FI+DGS D T SI+  L+ ++  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   YISFSRNFGKEAGLYAGLQQADGDYVAVMDVDLQDPPELLPQMLREVQAGDYDAVGTRRA  123
             +SF+RNFGKE++L+AGL++A GD V  +DVDLQDP E++P+++   QAG  + V ++R+
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRS  121

Query  124  DRDGEAKLRSWFSSQFYIWMNRISQTQLVDGARDYRVMTRQMVNAILSLSENQRFSKGIF  183
            DR  +++L+   +  FY   N+IS  ++ +   D+R+M+R++V+ I  L+E + F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  TWVGFKTKYIPFENRERIAGNTSWSFWSLSKYAIEGIVSFSTVPLMFITLLGFVSFGISL  243
            +WVG +T  + +   ER+AG +  + W L + A+EGI SFST PL   T +G+   +IS+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  ISAAFIVIRALVDNNSVDGWPSLVTiilfiggiqllslgiigRYVAAIFLETKHRPIYIT  303
            + +A ++I +LV  N+V G PSL+  ILF+GG+QL+++G++G Y++ I+LETK RP YI 
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  304  REEK  307
            +  +
Sbjct  302  KKGR  305

720) SPD_1431 in NC_008533


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

721) SPH_1719 in NC_010380


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

722) SPNOXC_14100 in NC_017592


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

723) SPP_1627 in NC_012467


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

724) gtrB in NC_003098


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (607),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  47   MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  105
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  106  AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  165
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  166  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  225
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  226  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  282
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  283  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  342
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  343  KRPLYLIK  350
             RP Y++K
Sbjct  295  SRPKYILK  302

725) SPN034156_04970 in NC_021006


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

726) SPN034183_14080 in NC_021028


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

727) SPN994038_13970 in NC_021026


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

728) SPN994039_13980 in NC_021005


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  164 bits (605),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 205/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

729) Geoth_1551 in NC_015660


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  163 bits (601),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 129/307 (43%), Positives = 196/307 (64%), Gaps = 6/307 (1%)

Query  2    VKYSVVIPVYNEALVIRETYRRLKRVMEQTDGPYELLFVNDGSEDETIDILKELAVKDET  61
            +K S+V+PV+NE   I   Y+ ++   E      E++F+NDGS D T  I++ LAV D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VKYVDFSRNFGHQIAITAGMDYAAGKAIVIIDADLQDPPELILEMIEKWKEGYDVVYAKR  121
            V  + F+RNFG + A+ AG+D A+G A++ ID DLQDP E+I ++IEKW+ G ++V AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  122  VKRKGETIFKKVTAYLFYRVLRAATEIDIPVDTGDFRLIDRKVRDQLVFMRERSRFVRGL  181
              R  +  +K+ TA  FY++    +   I  + GDFRL+ R V +++ ++ ER+ F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  ISWVGFKQTAVEYEREERFAGKTKYPLKKMIRFSLDGITSFSYKPlklasllgfflsass  241
            +SWVG +   VEY R ER AG +K+   K+  ++L+GITSFS  PL++ + +G+F+++ S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  ---vlgMIITLYLKLFTHSTVAGWASLLMVMLLCNGVMFIMIGVIGEYIGRIYDEVKQRP  298
                  MII     L   + V G +SLL+ +L+  GV +I IGV+GEYIGRIY E K RP
Sbjct  241  FLYGAWMIID---TLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  299  LYIVKET  305
             YI+K  
Sbjct  298  KYILKKG  304

730) FI9785_242 in NC_013504


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  163 bits (604),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 134/311 (44%), Positives = 210/311 (68%), Gaps = 8/311 (2%)

Query  2    KKLSIIVPCYNEEESVPLFYPAVNKVMDTIPDLEPEYWFINDGSKDNTLKEIKELRKKDP  61
             K+S++VP +NEEE++P+FY +V    +  P  E E  FINDGSKD T   I+ L   DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDP  59

Query  62   EHVHFVSFSRNFGKESALYAGLQAATGDYVVVMDVDLQDPPKFLPQMYDLIKTGEYDCIG  121
              V  +SF+RNFGKE+AL+AGL+ A+GD V+ +DVDLQDP   +P++ +  ++G  + + 
Sbjct  60   LVVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVL  117

Query  122  TRRVDRTGEAKFKSFLSDMFYKVVNKISDTEIVPGARDYRMMTRQMVDAVLNMPEYNRFS  181
            ++R DR+ ++++K   ++ FYK+ NKIS   I     D+R+M+R++V+ +  +PE N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  182  KGIFSWVGFKTKYLDYHNVERVAGESDWSTWKLFKYAMDGIADFSQAPLNLAVWIGTGSF  241
            KGI+SWVG +T  ++Y   ERVAG S  + WKL + A++GI+ FS  PL   VW   G F
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLF  235

Query  242  ILSLIGLIA--VIIRRVLYPGSSIFGWASMVciilllgglqllcigilgKYIGRVYIQVK  299
            + S+  L +  +II  +++ G+++ G +S++  IL+LGG+QL+ IG+LG YIGR+Y++ K
Sbjct  236  VASISFLYGAWMIIDTLVF-GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  NRPIYIIKEKK  310
            +RP YI+K  +
Sbjct  295  SRPKYILKKGR  305

731) kw2_0087 in NC_022369


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  163 bits (603),  Expect = 9e-42, Method: Compositional matrix adjust.
 Identities = 126/307 (42%), Positives = 210/307 (69%), Gaps = 10/307 (3%)

Query  4    LAIVVPVYNEQETIELFVREVNKKTENLEIKKNFYFVNDGSSDQTLPLLKKLARQNDNIN  63
            +++VVPV+NE+E+I +F + V    E      ++ F+NDGS D T ++++ LA  +  + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   YISFSRNFGKEAALLAGLQATKESLITVMDVDLQDPPELLVPMYHKLKEGYDAVGARRIS  123
             +SF+RNFGKE+AL+AGL+ +    +  +DVDLQDP E++  + +K + G + V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  RKGEALIVSLFSNLFYKIINKVSTTPIVEGARDFRLMTRQVVDSILELRESNRFSKGLFS  183
            R  ++ +    ++ FYK+ NK+ST  I E   DFRLM+R+VV++I  L E N F KG++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  184  WVGYEVTYLEYENHERSAGQT---SWSFRQLLSYSIDGIINFSETPLNIATFVGFISFLA  240
            WVG +   +EY   ER AG +   +W +++L   +++GI +FS  PL + T++G+  F+A
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL--FVA  237

Query  241  SV--LLSIFYLLKTLIFGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKRRP  298
            S+  L +   ++ TL+FG+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  299  NYIIKES  305
            +YI+K +
Sbjct  298  KYILKKG  304

732) LJ0168 in NC_005362


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (600),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 134/311 (44%), Positives = 209/311 (68%), Gaps = 8/311 (2%)

Query  2    KKLSIIVPCYNEEESVPLFYPAVNKVMDTIPDLEPEYWFINDGSKDNTLKEIKELRKKDP  61
             K+S++VP +NEEE++P+FY +V    +  P  E E  FINDGSKD T   I+ L   DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDP  59

Query  62   EHVHFVSFSRNFGKESALYAGLQAATGDYVVVMDVDLQDPPKFLPQMYDLIKTGEYDCIG  121
              V  +SF+RNFGKE+AL+AGL+ A+GD V+ +DVDLQDP   +P++ +  ++G  + + 
Sbjct  60   LVVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVL  117

Query  122  TRRVDRTGEAKFKSFLSDMFYKVVNKISDTEIVPGARDYRMMTRQMVDAVLNMPEYNRFS  181
            ++R DR+ ++++K   ++ FYK+ NKIS   I     D+R+M+R++V+ +  +PE N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  182  KGIFSWVGFKTKYLDYHNVERVAGESDWNTWKLFKYAMDGIADFSQAPLNLAVWIGTGSF  241
            KGI+SWVG +T  ++Y   ERVAG S  N WKL + A++GI+ FS  PL   VW   G F
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLF  235

Query  242  ILSLIGLIA--VIIRRVLYPDSSIFGWASMVciilllgglqllcigilgKYIGRVYIQVK  299
            + S+  L +  +II  +++ + ++ G +S++  IL+LGG+QL+ IG+LG YIGR+Y++ K
Sbjct  236  VASISFLYGAWMIIDTLVFGN-PVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  NRPIYIIKEKK  310
            +RP YI+K  +
Sbjct  295  SRPKYILKKGR  305

733) SE0477 in NC_004461


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (599),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 134/310 (44%), Positives = 204/310 (66%), Gaps = 7/310 (2%)

Query  1    MKIRVIVPCYNEGEVVLKTYDKLTEIMKKDSLIKNYEYDLLFINDGSTDTTIHHIKNIVA  60
            MKI ++VP +NE E +   Y  + E+      +K YE +++FINDGS D+T   I+ +  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQE----LKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   YDNHVKYLSFSRNFGKEAAMIAGYQHSTMHDAVIMIDGDLQHPPEYIPQMIEGYIEGYDQ  120
             D  V  LSF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP++IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHAS-GDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VVAKR-NRQGENFVRKTLSRCYYKLINAFVEDIQFEDGVGDFRLLSRRAVQALTTLDEYN  179
            V+AKR +R  +  +++  +  +YKL N  +   ++E+ VGDFRL+SR  V+ +  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYETKVFQYENVTREDGESKWTFRKLLNYGIDGLISFNNKPLRMMIYLGM  239
             F KG++ W+G +T V +Y    R  G SK   +KL N +++G+ SF+  PLR+  Y+G+
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FTFsisilyiiyllinilinginiPGYFttiaailllggiQLMSIGVVGEYIGRIYYEVK  299
            F  SIS+LY   ++I+ L+ G  + GY + + +IL+LGG+QL++IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  HRPKYIVENS  309
             RPKYI+ ++
Sbjct  295  SRPKYILKKG  304

734) SERP0363 in NC_002976


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (599),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 134/310 (44%), Positives = 204/310 (66%), Gaps = 7/310 (2%)

Query  1    MKIRVIVPCYNEGEVVLKTYDKLTEIMKKDSLIKNYEYDLLFINDGSTDTTIHHIKNIVA  60
            MKI ++VP +NE E +   Y  + E+      +K YE +++FINDGS D+T   I+ +  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQE----LKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   YDNHVKYLSFSRNFGKEAAMIAGYQHSTMHDAVIMIDGDLQHPPEYIPQMIEGYIEGYDQ  120
             D  V  LSF+RNFGKE+A++AG +H++  DAVI ID DLQ+P E IP++IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHAS-GDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VVAKR-NRQGENFVRKTLSRCYYKLINAFVEDIQFEDGVGDFRLLSRRAVQALTTLDEYN  179
            V+AKR +R  +  +++  +  +YKL N  +   ++E+ VGDFRL+SR  V+ +  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYETKVFQYENVTREDGESKWTFRKLLNYGIDGLISFNNKPLRMMIYLGM  239
             F KG++ W+G +T V +Y    R  G SK   +KL N +++G+ SF+  PLR+  Y+G+
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  FTFsisilyiiyllinilinginiPGYFttiaailllggiQLMSIGVVGEYIGRIYYEVK  299
            F  SIS+LY   ++I+ L+ G  + GY + + +IL+LGG+QL++IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  HRPKYIVENS  309
             RPKYI+ ++
Sbjct  295  SRPKYILKKG  304

735) SynRCC307_0406 in NC_009482


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (597),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 132/303 (44%), Positives = 205/303 (68%), Gaps = 9/303 (2%)

Query  11   IACCFNEEAGIITFIEAVLA----QPSVDRLLLIDDGSCDHTTGAIRQWMEAQPQAPITL  66
            +   FNEE +I  F  +V      +P    +++I+DGS D T + I     ++P   +  
Sbjct  6    VVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL--VVP  63

Query  67   VELTRNFGKEAAMLAGLDQAVGRCGAVIQIDSDLQHPPELIAEMVQHWHAGAEMVTAVRD  126
            + +TRNFGKE+A++AGLD+A G  +AVI ID DLQ+P E+I+++++ W+AGAEMV A R 
Sbjct  64   LSFTRNFGKEPALFAGLDHASG--DAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  127  ERDQESRLKILSASGFYRLFNRMVDSIELTDGAGDYRLLSAPVVQALTELRENDRFSKGL  186
            +R  ++RLK  +A  FY+L N+ + +  + +  GD+RL+S  VV+ +  L E + F KG+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  187  YPWTGFRSVNIAYLRPPRSSGTSAWNPRRLWLYALDGIFSFSVLPLKVWTllglvislls  246
             +W G ++  + Y+R+ R +G S  N ++LW  AL+GI SFS +PL+VWT +GL ++ +S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  247  liYAFYRLTITLVFGIDVPGWTTLVVAilflggvqligigilgEYVGRIYMESKRRPAYF  306
            ++Y+   +  TLVFG  V G  +L+V+ILFLGGVQLIGIG+LGEY+GRIY+E+K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  307  VRD  309
            ++ 
Sbjct  301  LKK  303

736) EHR_01935 in NC_018081


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (597),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 204/303 (68%), Gaps = 3/303 (0%)

Query  1    MKISIVVPCYNEEKTVPLFFDEVEKFKDGHEFE--YLFIDDGSSDGTLQAIKALARKYKY  58
            MKIS+VVP +NEE ++P+F+  V  F++   +E   +FI+DGS D+T   I+ALA     
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  59   VRFVSFSRNFGKEAALYAGLQASTGELITVMDVDLQDPPELLPLMIEKITTTDIDCVGTR  118
            V  +SF+RNFGKE+AL+AGL+ ++G+ +  +DVDLQDP E++P +IEK  +   + V ++
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  119  RSTREGEPVIRSFFAKRFYQLINKISDTEMVDGARDFRLMTRQMVDAVLELTEYNRFSKG  178
            RS R  +  ++   A +FY+L NKIS   + +   DFRLM+R++V+ +  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWVGFKTEYLSFENRERVAGETSWSFWKLFNYSIDGIVNFSDAPLTIASFTGALSCIG  238
            ++SWVG +T+ + +   ERVAG +  + WKL N +++GI +FS  PL + ++ G +    
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  SGiailfiiarallfGDPTAGWPSMVSiflfiggiqllclgiigKYIGKIFLETKQRPVY  298
            S +    +I  +L+FG+P  G PS++  +LF+GG+QL+ +G++G YIG+I+LETK RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IIR  301
            I++
Sbjct  300  ILK  302

737) GY4MC1_1457 in NC_014650


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (597),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 129/307 (43%), Positives = 197/307 (65%), Gaps = 6/307 (1%)

Query  2    VKYSVVIPVYNEALVIRETYRRLKRVMEQTDGPYELLFVNDGSEDETIDILKELAVKDET  61
            +K S+V+PV+NE   I   Y+ ++   E      E++F+NDGS D T  I++ LAV D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VKYVDFSRNFGHQIAITAGMDYAAGKAIVIIDADLQDPPELILEMIEKWKEGYDVVYAKR  121
            V  + F+RNFG + A+ AG+D A+G A++ ID DLQDP E+I ++IEKW+ G ++V AKR
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  122  VKRKGETIFKKVTAYLFYRVLRAATEIDIPVDTGDFRLIDRKVRDQLVFMRERSRFVRGL  181
              R  +  +K+ TA  FY++    +   I  + GDFRL+ R V +++ ++ ER+ F++G+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  ISWVGFKQTAVEYEREERFAGKTKYPLKKMIRFSLDGITSFSYKPlklasllgfflsass  241
            +SWVG +   VEY R ER AG +K+   K+  ++L+GITSFS  PL++ + +G+F+++ S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  ---vlgMIITLYLKLFTYSTVAGWASLLMVMLLCNGVMFIMIGVIGEYIGRIYDEVKQRP  298
                  MII     +F  + V G +SLL+ +L+  GV +I IGV+GEYIGRIY E K RP
Sbjct  241  FLYGAWMIIDTL--VFG-NPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  299  LYIVKET  305
             YI+K  
Sbjct  298  KYILKKG  304

738) SSP2013 in NC_007350


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (600),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 130/308 (43%), Positives = 202/308 (66%), Gaps = 7/308 (2%)

Query  1    MQMRVIVPCYNEGEVILKTYEKLTEILSKDSQYHHYDYDILFVDDGSKDKTINYIQDMAT  60
            M++ ++VP +NE E I   Y  + E+     +   Y+ +I+F++DGSKD T + I+ +A 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   KDHHVKFISFSRNFGKESAMIAGYQHSKDCDGVIMIDADLQHPPELIPQMIEGYMDGYDQ  120
             D  V  +SF+RNFGKE+A++AG +H+ + D+VI ID DLQ+P E+IP++IE    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRIGEKQSRKVMTKIYYKLINHFVEDIKLEDGIGDFRLLSQRAVISLTQLDEYN  179
            V+AKR DR  + + ++  +  +YKL N  +   K+E+ +GDFRL+S+  V ++  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLYEWIGYNTKVFTYENVEREDGESKWSFSKLLNYGIDGLISFNNKPLRAMIYLGL  239
             F KG+  W+G +T V  Y   ER  G SK +  KL N +++G+ SF+  PLR   Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  IVFFISLLYIGYISVGIMIRGVETPGYFSTiaailllggiqlisigivgEYIGRIYYEVK  299
            +V  IS+LY + + ++ ++ G    GY S + +IL+LGG+QLI+IG++GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  QRPKYIVQ  307
             RPKYI++
Sbjct  295  SRPKYILK  302

739) SPN23F_16200 in NC_011900


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (599),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

740) SPJ_1512 in NC_012466


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (599),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

741) SPNA45_00621 in NC_018594


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYCLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWSFRQLFFYSIEGIVNFSDFPLTIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

742) Vpar_1183 in NC_013520


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 121/299 (41%), Positives = 201/299 (68%), Gaps = 1/299 (0%)

Query  1    MLLSIVVPVYNEEENIANFYKAVTDVMSGLTYDYELIFVDDGSSDSSAMILREIAFNDKH  60
            M +S+VVPV+NEEE I+ FYK+V +      Y+ E++F++DGS D++  I+  +A +D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   VKVLLLARNFGHQTALTCGLDYAHGDAVITMDGDMQHPPALIPELVRLWESGYDVVRTIR  120
            V  L ++RNFG + AL  GLD A GDAVI +D D+Q+P  +IP+L+  W++G ++V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  DSTDDASWAKSFTSKYYYKLMNKMADVPIVEGGSDFRLMNSKALGTLKRFREHGRFLRGI  180
                  ++ K  T+  +YKL NK++   I E  +DFRLM+   +  +K + E+  F++GI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  VGALGYRQAELHFVAPPRFAGVSKFSVRKMIRFALDGVTAFSRVPLRAALYVGVLCGGMS  240
            ++ +G +   +++V + R AG+SKF+ +K+  +AL+G+T+FS  PLR   Y+G++ +++S
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  241  FllilhllyvylT-GQALNGWTTLGVSilfiggiqlvglgiigEYVGRIFEEVKQRPLY  298
            FL    ++   L  G+++ G  +L VSILF+GG+QL+G+G++GEY+GRI+ E K RP Y
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

743) INV104_13740 in NC_017591


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (597),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 205/306 (67%), Gaps = 6/306 (1%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKTSWSFRKLFFYSIEGIINFSDFPLII-AFVAGLLS  238
            KG+++WVG +T  ++Y   ER AG +  + +KL   ++EGI +FS FPL + +++ GL+ 
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYI-GLFV  236

Query  239  CFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETKKR  298
              +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  299  PLYLIK  304
            P Y++K
Sbjct  297  PKYILK  302

744) S58_62950 in NC_020453


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  162 bits (597),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 121/302 (41%), Positives = 197/302 (66%), Gaps = 5/302 (1%)

Query  21   LSIVIPLYNEGAGLTSLHERLNGLASTLRQRFGLACELVYVDDGSRDNTLAIARTLQADA  80
            +S+V+P++NE  ++  +   +  +   L+       E+V+++DGS+D T +I  +L    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQE-LKP---YEVEIVFINDGSKDATESIINALAVSD  58

Query  81   LDVQVVSLSRNFGKEAALMAGLDHARRGAVLFMDGDGQHPPALVEQLVSHWIKDGYDVVY  140
              V  +S++RNFGKE+AL AGLDHA  +AV+ +D D Q+P  ++ +L+  W + G ++V 
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEMVL  117

Query  141  TAKAHRDNEPFLRRVAVRGFYSLINWGARQKIPEDAGDFRLLSPRAVAALRQLPERNRFF  200
            + +++R  +  L+R +   FY L N  +  KI E+ GDFRL+S   V  ++ LPERN F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  201  KGLASWIGFRQIRVDYEPAARAHGVTTFNVTSLLGLSIEGLTSFSVAPLRfasllgilla  260
            KG+ SW+G +   V+Y  A R  G++ FN   L  L++EG+TSFS  PLR  + +G+++A
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  261  sgaflfglsILWETFTTGKSVPGYPSLMVGLMTIGGVQLIMIGIMGEYIGKILSELKARP  320
            S +FL+G  ++ +T+  G++V GYPSL+V+++ +GGVQLI IG++GEYIG+I  E K+RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  321  IY  322
             Y
Sbjct  298  KY  299

745) SP70585_1646 in NC_012468


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (596),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 128/305 (42%), Positives = 202/305 (67%), Gaps = 4/305 (1%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKTSWSFRKLFFYSIEGIINFSDFPLIIAFVAGLLSC  239
            KG+++WVG +T  ++Y   ER AG +  + +KL   ++EGI +FS FPL +    GL+  
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  240  FLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETKKRP  299
             +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  300  LYLIK  304
             Y++K
Sbjct  298  KYILK  302

746) SPNINV200_14380 in NC_017593


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 128/309 (42%), Positives = 207/309 (67%), Gaps = 12/309 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKTN---WSFRQLFFYSIEGIINFSDFPLII-AFVAG  235
            KG+++WVG +T  ++Y   ER AG ++   W +++L   ++EGI +FS FPL + +++ G
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYI-G  233

Query  236  LLSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLET  295
            L+   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLET
Sbjct  234  LFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  296  KKRPLYLIK  304
            K RP Y++K
Sbjct  294  KSRPKYILK  302

747) RBR_05740 in NC_021013


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (596),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 123/305 (41%), Positives = 203/305 (67%), Gaps = 8/305 (2%)

Query  4    IDLVVPCYNEEAGLEHFVLETNKVINSLPEYSFRYILVNDGSKDRTYLIMKKLAKTFNNI  63
            I LVVP +NEE ++  F   T + ++ L  Y    +++NDGSKD T  I++ LA +   +
Sbjct  3    ISLVVPVFNEEEAIPVF-YKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  64   KYISFSRNFGKEAAMYAGLKHTTADYVVVMDADLQHPPQLFPQMIQAVEHEGYDCCATKR  123
              +SF+RNFGKE+A++AGL H+++D V+ +D DLQ+P +++P++I+   + G +   +KR
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEMVLAKR  120

Query  124  ADREGESKFRGIFSKLFFKLSNRLTDVKMPYGAMDFRMMSRQMVDSILELSEVQRFSKGI  183
            +DR  +++++   +  F+KL N+++  K+     DFR+MSR++V++I  L+E + F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGFNTKWIAYKTVDRQLGQT---TWKFSSLFKYAIEGITSFSVAPLRFTAVMGfiif  240
            +SWVG +T  + Y   +R  G +    WK+ +L   A+EGITSFS  PLR  + +G+++ 
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  visliyiiitliqtlflgittPGYVTTLCAILFMGGITEMSIGILGEYIGKIYMEAKDRP  300
             IS++Y    +I+TL +G    GY + L +ILF+GG+  ++IG+LGEYIG+IY+E+K RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  IYITK  305
             YI K
Sbjct  298  KYILK  302

748) SP670_1690 in NC_014498


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (595),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFLYSIEGIINFSDFPLIIAFVAGL  236
            KG+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

749) gtrB in NC_010582


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (595),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  19   MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  77
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  78   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  137
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  138  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  197
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  198  KGLFAWVGFKTYYLDYPNVERQAGKTN---WSFRQLFFYSIEGIINFSDFPLIIAFVAGL  254
            KG+++WVG +T  ++Y   ER AG ++   W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  255  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  314
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  315  KRPLYLIK  322
             RP Y++K
Sbjct  295  SRPKYILK  302

750) SPG_1530 in NC_011072


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (595),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFFYSIEGIINFSDFPLIIAFVAGL  236
            KG+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

751) gtrB in NC_018630


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (595),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  7    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  65
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  66   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  125
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  126  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  185
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  186  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFFYSIEGIINFSDFPLIIAFVAGL  242
            KG+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  243  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  302
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  303  KRPLYLIK  310
             RP Y++K
Sbjct  295  SRPKYILK  302

752) MYY_1536 in NC_017769


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (595),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFLYSIEGIINFSDFPLIIAFVAGL  236
            KG+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

753) SPT_1546 in NC_012469


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (595),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  1    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  119
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFLYSIEGIINFSDFPLIIAFVAGL  236
            KG+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  296
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

754) arnC in NC_014251


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (595),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 204/308 (67%), Gaps = 10/308 (3%)

Query  7    MMISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  65
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  66   AVHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVG  125
             V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  126  TRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  185
            ++R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  186  KGLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFLYSIEGIINFSDFPLIIAFVAGL  242
            KG+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  243  LSCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETK  302
            +   +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  303  KRPLYLIK  310
             RP Y++K
Sbjct  295  SRPKYILK  302

755) Geoth_1688 in NC_015660


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (594),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 125/307 (41%), Positives = 204/307 (67%), Gaps = 10/307 (3%)

Query  6    LTIVVPCYNEEEVLPETIDKLRGLREELIDERLISSESALLFVDDGSNDATWDIIYKASL  65
            +++VVP +NEEE +P     +R ++E      L + E  ++F++DGS+DAT  II   ++
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQE------LKPYEVEIVFINDGSKDATESIINALAV  56

Query  66   RYPEVKGLKLARNAGHQNALLAGLMAAKTRSDCIVSIDADLQDDIAVIRDFVKKFQEGYE  125
              P V  L ++RN G + AL+AGL    + +D +++ID DLQD I VI +++ K Q G E
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGL--DHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAE  114

Query  126  IVYGVRNKRDADTFFKRHTAQWFYKLMRAMGVDLVYNH-ADYRLLSRRAVEELERFEEVN  184
            +V + R+ R +D  +KR TA+WFYKL   ++   + ++ +D+RL+SR  VE++  + E N
Sbjct  115  MVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  185  LFLRGIVPLLGFRSATVHYDRKERLAGKTKYPLKKMIAFALDGITSFSVTPIRMISLIGL  244
            LF++GI++ +G ++  V+Y R ER+AG +K+   K+  +AL+GITSFS  P+R+ + IGL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  245  -VSffisllfggyflflkltgHTQTGWTSLIISIWFLGGLQLIAFGLIGEYIGKIYKETK  303
             V+ +  L  +  ++   + G+   G  SL++SI FLGG+QLI++G++GEYIG+IY ETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  304  RRPRYIV  310
             RP+YI+
Sbjct  295  SRPKYIL  301

756) GY4MC1_1604 in NC_014650


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (594),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 125/307 (41%), Positives = 204/307 (67%), Gaps = 10/307 (3%)

Query  6    LTIVVPCYNEEEVLPETIDKLRGLREKLIDERLISSESALLFVDDGSNDATWDIIYKASL  65
            +++VVP +NEEE +P     +R ++E      L + E  ++F++DGS+DAT  II   ++
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQE------LKPYEVEIVFINDGSKDATESIINALAV  56

Query  66   RYPEVKGLKLARNAGHQNALLAGLLAAKTRSDCIVSIDADLQDDIAVIRDFVKKFQEGYE  125
              P V  L ++RN G + AL+AGL    + +D +++ID DLQD I VI +++ K Q G E
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGL--DHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAE  114

Query  126  IVYGVRNKRDADTFFKRHTAQWFYKLMRAMGVDLVYNH-ADYRLLSRRAVEELERFEEVN  184
            +V + R+ R +D  +KR TA+WFYKL   ++   + ++ +D+RL+SR  VE++  + E N
Sbjct  115  MVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  185  LFLRGIVPLLGFRSATVHYDRKERLAGKTKYPLKKMIAFALDGITSFSVTPIRMISLIGL  244
            LF++GI++ +G ++  V+Y R ER+AG +K+   K+  +AL+GITSFS  P+R+ + IGL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  245  -VSffisllfggyflflkltgHTQTGWTSLIISIWFLGGLQLIAFGLIGEYIGKIYKETK  303
             V+ +  L  +  ++   + G+   G  SL++SI FLGG+QLI++G++GEYIG+IY ETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  304  RRPRYIV  310
             RP+YI+
Sbjct  295  SRPKYIL  301

757) RPB_1844 in NC_007778


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  161 bits (593),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 201/304 (67%), Gaps = 5/304 (1%)

Query  19   LGLSIVVPAFNEAAGLPALHDRLTTLAATLRQRYGLACEVVYVDDGSADATLSIARDLPA  78
            + +S+VVP FNE  ++P +   +  +     + Y +  E+V+++DGS DAT SI   L+ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQEL--KPYEV--EIVFINDGSKDATESIINALAV  56

Query  79   VGIDVQVVSLSRNFGKEAALLAGLDHARRGAVLFMDGDGQHAPELVETLVSHWIDDGYDV  138
             +  V  +S++RNFGKE+AL+AGLDHA  +AV+ +D D Q++ E++  L+  W + G ++
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEM  115

Query  139  VYTAKAHRDNEPALRRAAVRGFYAMINWGARQKIPEDAGDFRLLSPRAATALKLLPERNR  198
            V + +++R  +  L+R +   FY + N  +  KI E+ GDFRL+S      +KLLPERN 
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  199  FFKGLASWIGFKQFRVDYEPAPRTHGFTSFSAGRLIGLSIEGLTSFSVAPLRIasllgaa  258
            F KG+ SW+G +   V+Y  A R  G++ F++ +L  L++EG+TSFS  PLR+ + +G  
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLF  235

Query  259  lafgaflfglsILWETWVGGKSVPGYPSLMVGMMTIGGVQLLMIGIVGEYIGKILSELKA  318
            +A  +FL+G  ++ +T V G++V GYPSL+V+++ +GGVQL+ IG++GEYIG+I  E K+
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  319  RPIY  322
            RP Y
Sbjct  296  RPKY  299

758) MSA_13580 in NC_021486


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  160 bits (589),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 127/307 (42%), Positives = 208/307 (68%), Gaps = 8/307 (2%)

Query  6    LSVVVPCYNEEETVKLFIKEIQQYEKQLSESLIFEYIFVNDGSKDDTLKVLRTVSATIDN  65
            +S+VVP +NEEE++ +F K +++++ +L    + E +F+NDGSKD T  ++ +++ +   
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPYEV-EIVFINDGSKDATESIINALAVSDPL  60

Query  66   VHFLSLSRNFGKESALLAGLEYASGDYITVMDVDLQDPPELLVDMYQKIQEGYDIVGTRR  125
            V  LS++RNFGKE+AL+AGL+ ASGD +  +DVDLQDP E++ ++ +K Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  126  KDREGEPPIRTFFAKLFYKVINSVSDTKIVDGARDFRLMTRQVVDSILEMGEVNRFSKGI  185
             DR  +  ++   A  FYK+ N +S  KI +   DFRLM+R+VV++I  + E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  186  FAWVGYETYYIAFENRERVAGET---SWSFWQLVRYSMEGFINFSEALLSIATYSGITSF  242
            ++WVG +T  + +   ERVAG +   +W +W+L   ++EG+ +FS   L + TY G+   
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  243  LISLLGILFVIIRKLAYGGSVDGWASIVVVilfigglqllclgilgKYVAKIFLETKKRP  302
             IS+L    +II  L +G +V G +S++V ILF+GG+QL+ +G+LG Y+++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  303  AYFIKET  309
             Y++K  
Sbjct  298  KYILKKG  304

759) llmg_0114 in NC_009004


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  160 bits (589),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 126/309 (41%), Positives = 210/309 (68%), Gaps = 14/309 (4%)

Query  4    LAIVVPVYNEQEMIELFVREVN--KKTENLEIKKIFYFVNDGSSDQTLPLLKKLARQNDN  61
            +++VVPV+NE+E I +F + V   +     E+  +F  +NDGS D T ++++ LA  +  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVF--INDGSKDATESIINALAVSDPL  60

Query  62   INYISFSRNFGKEAALLAGLQATKESLITVMDVDLQDPPELLVPMYHKLKEGYDAVGARR  121
            +  +SF+RNFGKE+AL+AGL+ +    +  +DVDLQDP E++  + +K + G + V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  122  ISRKGEALIVSLFSNLFYKIINKVSTTPIVEGARDFRLMTRQVVDSILELRESNRFSKGL  181
              R  ++ +    ++ FYK+ NK+ST  I E   DFRLM+R+VV++I  L E N F KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FSWVGYEVIYLEYENHERSAGQT---SWSFRQLLSYSIDGIINFSETPLNIATFVGFISF  238
            +SWVG +   +EY   ER AG +   +W +++L   +++GI +FS  PL + T++G+  F
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL--F  235

Query  239  LASV--LLSIFYLLKTLIFGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKR  296
            +AS+  L +   ++ TL+FG+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  297  RPNYIIKES  305
            RP+YI+K +
Sbjct  296  RPKYILKKG  304

760) LLNZ_00570 in NC_017949


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  160 bits (589),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 126/309 (41%), Positives = 210/309 (68%), Gaps = 14/309 (4%)

Query  4    LAIVVPVYNEQEMIELFVREVN--KKTENLEIKKIFYFVNDGSSDQTLPLLKKLARQNDN  61
            +++VVPV+NE+E I +F + V   +     E+  +F  +NDGS D T ++++ LA  +  
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVF--INDGSKDATESIINALAVSDPL  60

Query  62   INYISFSRNFGKEAALLAGLQATKESLITVMDVDLQDPPELLVPMYHKLKEGYDAVGARR  121
            +  +SF+RNFGKE+AL+AGL+ +    +  +DVDLQDP E++  + +K + G + V A+R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  122  ISRKGEALIVSLFSNLFYKIINKVSTTPIVEGARDFRLMTRQVVDSILELRESNRFSKGL  181
              R  ++ +    ++ FYK+ NK+ST  I E   DFRLM+R+VV++I  L E N F KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FSWVGYEVIYLEYENHERSAGQT---SWSFRQLLSYSIDGIINFSETPLNIATFVGFISF  238
            +SWVG +   +EY   ER AG +   +W +++L   +++GI +FS  PL + T++G+  F
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL--F  235

Query  239  LASV--LLSIFYLLKTLIFGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKR  296
            +AS+  L +   ++ TL+FG+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  297  RPNYIIKES  305
            RP+YI+K +
Sbjct  296  RPKYILKKG  304

761) K710_1454 in NC_021314


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  160 bits (589),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 125/311 (41%), Positives = 201/311 (65%), Gaps = 14/311 (4%)

Query  4    LSIIVPCYNEEETIYPYLDEMRLLENAMVSQLAFEYIFIDDGSTDNTLSILRELSSRFGN  63
            +S++VP +NEEE+I  +   +R +++  +     E +FI+DGS D T SI+  L+     
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQE--LKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   LHYLSFSRNFGKEAGLLAGLEEAKGDFITVMdvdlqdppdllplMYAKILEGYDVVGTRR  123
            +  LSF+RNFGKE++L+AGL++A GD +  +DVDLQDP +++P +  K   G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  ISRKGEPLVRSFCSKLFYSLINRMSKTPILDGVRDFRLMTRQVVDSILELGEVNRFSKGI  183
              R  +  ++   +  FY L N++S   I + V DFRLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGYETTYISYDNRERQHGKS---SWTFWDLIHYSIDGFINFSEMPLTIATWTGTISF  240
            +SWVG +T  + Y   ER  G S   +W +W+L   +++G+ +FS  PL +  WT    F
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRV--WTYIGLF  235

Query  241  VLSIFAIIF---IVIRKLLFGDPVSGWASTVSIILFIGGIQLFCMGIIGKYMSKIFLETK  297
            V SI ++++   ++I  L+FG+PV G +S +  ILF+GG+QL+ +G++G Y+++I+LETK
Sbjct  236  VASI-SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  298  KRPIYIIKEKR  308
             RP YI+K  R
Sbjct  295  SRPKYILKKGR  305

762) CC1_07560 in NC_021009


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  160 bits (592),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 203/305 (67%), Gaps = 10/305 (3%)

Query  7    IVIPCYNEEEVLPITSKMFLEELEDLIHKGKISDNSRILFVNDGSKDKTWEIIENLAAEN  66
            +V+P +NEEE +P+  K  + E+++L      + +  I+F+NDGSKD T  II+ LA  +
Sbjct  5    LVVPVFNEEEAIPVFYKT-VREFQELK-----PYEVEIVFINDGSKDATESIINALAVSD  58

Query  67   PHFIGMSQSRNRGHQNAVLAGLMESKDMCDITISIDCDGQDDIKAMEAMVDAYHDGSEVV  126
            P  + +S +RN G + A++AGL ++ +  D  I+ID D QD I  +  +++  + G+E+V
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASG--DAVIPIDVDLQDPIEVIPHLIEKWQAGAEMV  116

Query  127  YGVRSKRDTDTFFKRFTAESFYKLLNKMGVEVVYNH-ADYRLISARVLKEFANFKEVNLF  185
             + RS R TD  +KR TAE FYKL NK++   + ++ +D+RL+S  V+ ++  + E NLF
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  186  LRGMIPLVGFKSTSVYYERHERIAGESHYPLSKMLGLAIDGITSLSIKPIRLITGLGIGV  245
            ++G+++ VG ++  V Y R ER+AG S +   K+  LA++GITS+S  P+R+ T +G+ V
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  246  SILSFIGVIWAVISQLT-GHAVTGWASTVCLVCFMGGVQLICLGVLGEYIGKIYMEVKAR  304
            + +SF+   W +I  L  G++V G +S +  + F+GGVQLI +GVLGEYIG+IY+E K+R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  305  PRYII  309
            P+YI+
Sbjct  297  PKYIL  301

763) ykoT in NC_015690


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  160 bits (591),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 125/309 (41%), Positives = 206/309 (67%), Gaps = 14/309 (4%)

Query  9    IVVPCYNEEEVLPE--TTSRLIEVLQNLINQKKIALQSKIMFVDDGSKDRTWEIIQALND  66
            +VVP +NEEE +P    T R ++ L+        + +  I+F++DGSKD T  II+AL  
Sbjct  5    LVVPVFNEEEAIPVFYKTVREFQELK--------PYEVEIVFINDGSKDATESIINALAV  56

Query  67   KQDFVTGLKLARNAGHQNALLAGLMTAKSFSDCVISIDADLQDDVNAIYEFIQKYHEGYD  126
             + +V  L ++RN G + AL+AGL    + +D VI+ID DLQD ++ I ++I+K + G +
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGL--DHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAE  114

Query  127  IVYGVRQSRTTDTFFKRFTAESFYRLMKTMGVNLVFNH-ADYRLMSKRTLENLADFQEVN  185
            +V + R  R+TD  +KR TAE FY+L + ++   + ++ +D+RLMS+  +EN+  + E N
Sbjct  115  MVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  186  LFIRGIVPLLGYKSTEVYYDRNERFAGESKYPLKKMLAFAFDGISSFSVTPIRLVTTAGF  245
            LF++GI++ +G ++  V Y R ER AG SK+   K+  +A++GI+SFS  P+R+ T  G+
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  246  MIFGLSILAGIYAIIAK-ILGMTVTGWASIILSVWFLGGVQLIALGLIGEYVGKIYKEVK  304
             + ++S+L G   II   ++G  V G +S+++S+ FLGGVQLI++G++GEY+G+IY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  305  ARPKFIIEK  313
            +RPK+I+ K
Sbjct  295  SRPKYILKK  303

764) SP_1606 in NC_003028


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  159 bits (587),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 127/307 (42%), Positives = 203/307 (67%), Gaps = 10/307 (3%)

Query  1    MISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNPA  59
             IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  60   VHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVGT  119
            V  +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  120  RRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFSK  179
            +R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  180  GLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFFYSIEGIINFSDFPLIIAFVAGLL  236
            G+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL+
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLF  235

Query  237  SCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETKK  296
               +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  297  RPLYLIK  303
            RP Y++K
Sbjct  296  RPKYILK  302

765) CFF8240_1389 in NC_008599


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  159 bits (587),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 128/311 (42%), Positives = 202/311 (65%), Gaps = 17/311 (5%)

Query  24   VSIVVPCYNEEASISIFQNEIIKILTNIKDKINSNFEYEIIFIDDGSQDKTALEIKKLCN  83
            +S+VVP +NEE +I++F    ++ + ++K      +E EI+FI+DGS+D T   I+ L  
Sbjct  3    ISLVVPVFNEEEAIPVF-YKTVREFQELK-----PYEVEIVFINDGSKDATESIINALAV  56

Query  84   KFNNTHLIKFSRNFGKEAAILAGFRMAKNSSIVLIDVDLQHPVYLIEKMYEIWYSNEADI  143
                   + F+RNFGKE+A++AG+  A   +++ IDVDLQ+P+ +I  + E W    A++
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEM  115

Query  144  IYAIRKDRKGESFLKSRLSEIFYKISNIISDVKLKPGVSDFRLMDKKVVDILVAMNEYHR  203
            + A R DR  ++ LK + +E FYK+ N IS  K+   V+DFRLM + VV+ +  + E + 
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  204  FSKAMFEWVGFKKIALEYDYAPRINGKT---SWSYMKLFKYAVEGMISFSTTPLKISFW-  259
            F K+++ WVG +   +EY  A R+ G +   +W   KL + A+EG+ SFST PL++  W 
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGW---KLWNLALEGITSFSTFPLRV--WT  230

Query  260  -IGLMISFISGTYGIFIVFDTIINGNTVKGYPSMLTiilflggiqliflgiigqYIARIY  318
             IGL ++ IS  YG  +++DT++ GN V+GYPS+L  ILFLGG+QLI +G++G+YI+RIY
Sbjct  231  YIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY  290

Query  319  EQVKDRPHYIV  329
             + K RP YI+
Sbjct  291  LETKSRPKYIL  301

766) RPD_4119 in NC_007958


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  159 bits (588),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 122/302 (41%), Positives = 202/302 (67%), Gaps = 5/302 (1%)

Query  21   LSIVVPVFNEAAGLQALHQRLSVLANTLRQRYALACEVVYVDDGSSDSTLSIARNLPANG  80
            +S+VVPVFNE  ++  + + +  + +   + Y +  E+V+++DGS D+T SI   L+ ++
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQEL--KPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  81   IDVQMVSLSRNFGKEAALLAGLDHARRGAVLFMDGDGQHAPEMVEKLVSHWIDDGYDVVY  140
              V  +S++RNFGKE+AL+AGLDHA  +AV+ +D D Q++ E++  L+  W + G ++V 
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKW-QAGAEMVL  117

Query  141  TAKAHRDHEPRLRRAAVRGFYALINWGARQKIPEDAGDFRLLSPRAAAALKQLPERNRFF  200
            + +++R  + RL+R +   FY L N  +  KI E+ GDFRL+S      +K LPERN F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  201  KGLASWIGFRQFRVDYEPEPRAHGFTTFSAGRLIGLSIEGLTSFSVAPLRiasalgaala  260
            KG+ SW+G +   V+Y    R  G++ F++ +L  L++EG+TSFS  PLR+ + +G  +A
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVA  237

Query  261  igaflfglsILWETWIDGKSVPGYPSLMVGMMTIGGVQLLMIGIVGEYIGKILSELKARP  320
              +FL+G  ++ +T + G++V GYPSL+V+++ +GGVQL+ IG++GEYIG+I  E K+RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  321  IY  322
             Y
Sbjct  298  KY  299

767) ybaI in NC_020450


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  158 bits (583),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 130/307 (43%), Positives = 212/307 (70%), Gaps = 6/307 (1%)

Query  1    MKLSIVVPVYNEEESIEIFIKEVEEKTKSLPLEKIFYFVNDGSTDKTLKIIKKLAEKRAD  60
            MK+S+VVPV+NEEE+I +F K V E     P E  + F+NDGS D T  II+ LA   + 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  61   IQYISFSRNFGKeaallaglevavgDFVTIMDVDLQDPPEMLPEMFEKLQEGYDVVGTRR  120
            +  +SF+RNFGKE+AL+AGL+ A GD V  +DVDLQDP E++P+++EK Q G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  121  TSRTGEPPIRSFFAKLFYKIINKISKTQIVDGARDYRLMTRQVVDSILKLQESNRFSKGL  180
            + R+ +  ++   A  FYK+ NKIS  +I +   D+RLM+R+VV++I  L E N F KG+
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  181  FSWVGYEVTYLEYENRERSRGQT---SWSFWSLLRYSVDGFVNFSELPLNIATFVGilcf  237
            +SWVG +   +EY   ER  G +   +W +W+L   +++G+ +FS +PL + T++G++  
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  238  fisiilslfYTVKTLVWGDSVQGFPTlvilvlmlgglqllASGIIGKYLAKTFIEVKKRP  297
             IS++ +    + TLV G++V+G+P+L++ +L LGG+QL++ G++G Y+++ ++E K RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  298  NYIIKES  304
            +YI+K +
Sbjct  298  KYILKKG  304

768) SPAP_1627 in NC_014494


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  158 bits (583),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 126/307 (42%), Positives = 202/307 (66%), Gaps = 10/307 (3%)

Query  1    MISIIVPCLNEEEVLPLFYQALEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNPA  59
             IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  60   AHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVGT  119
               +SF+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP  ++ ++ +  +   ++  V +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLA  118

Query  120  RRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFSK  179
            +R+ R  +  ++   A  FY+L +KIS   +   V DFR+M R VV+ I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  180  GLFAWVGFKTYYLDYPNVERQAGKT---SWSFRQLFFYSIEGIINFSDFPLIIAFVAGLL  236
            G+++WVG +T  ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL+
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLF  235

Query  237  SCFLSLLMTFFVVVRTLILGNPTSGWTSLMAVilflggiqlltigilgKYISKIYLETKK  296
               +S+L    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  297  RPLYLIK  303
            RP Y++K
Sbjct  296  RPKYILK  302

769) NIDE0738 in NC_014355


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  158 bits (582),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 196/304 (65%), Gaps = 7/304 (2%)

Query  84   LSVIIPVFNEAENLPTLHGRLTRALVNL-GMEYEIVLVDDGSQDQSPDILRRMEAEDQRI  142
            +S+++PVFNE E +P +  +  R + +L   E EIV+++DGS+D +  I+  +   D  +
Sbjct  3    ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  143  VIVEFARNFGHQVAISAGLEQSRGRVVCIMDADLQDPPEVLHTFLAKWREGWEVVYAIRT  202
            V + F+RNFG + A+ AGL+++ G  V  +D DLQDP EV+  ++ KW+ G E+V A R+
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  203  ERKEWWGKRLAYAG---FYRLLQRVANIDIPLDAGDFCvmdrrvvdllvrmPERNRFVRG  259
            +R    + RL       FY+L ++++   I  + GDF +M R VV+ +  +PERN F++G
Sbjct  122  DRST--DGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  260  IRSWVGFKQIGVPYERHARHAGAPKYTFRKLLYLALDGLISFSHMPLRIITllgfsvsfl  319
            I SWVG +   V Y R  R AG +K+  +KL  LAL+G+ SFS  PLR+ T +G+ V+ +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  320  sflvalfylvKKFTLGTGVPGFTTLVVSIFFLSGIQLMTIGVIGEYIGRISDEVKRRPLY  379
            SFL +   ++  + +G  V G+ +L+VSI+FL+G+QL+ IGV+GEYIGRI  E K RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  380  VARR  383
            + ++
Sbjct  300  ILKK  303

770) Sca_2101 in NC_012121


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  157 bits (578),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 113/276 (41%), Positives = 179/276 (65%), Gaps = 9/276 (3%)

Query  3    KVRMLIPCFNEEDVINYTYKELTKVLARD-SELHHYDYDLLFIDDGSKDRTIDIIKDYSQ  61
            K+ +++P FNEE+ I   YK +     R+  EL  Y+ +++FI+DGSKD T  II+  + 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-----REFQELKPYEVEIVFINDGSKDATESIINALAV  56

Query  62   QDEKVKYISFSRNFGKEAAMFAGLENSQDVDAVIILDGDLQHPPELIPQMIKKYLEDGTD  121
             D  V  +SF+RNFGKE+A+FAGL+++ + DAVI +D DLQ+P E+IP++I K  + G++
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKW-QAGAE  114

Query  122  QVIAKR-NRDGEKASRKLMTKCYYKLVNRFVDVPIEDGVGDFRLLSQRVVRSLAELDEAQ  180
             V+AKR +R  +   ++  +  +YKL N++    IE+ VGDFRL+S+ VV ++  L E +
Sbjct  115  MVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  181  RFSKGLFSWVGYPTETIEYKNQERVAGDSKWYFFKLLDYGVDGVISFNNKPLRTIMYFGM  240
             F KG++SWVG  T+ +EY   ERVAG SK    KL + +++G+ SF+  PLR   Y+G+
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  241  GIFGISILYLLVNFILILINGVDSPGYFTTIFAVLF  276
             + +IS+LY    +I  L+ G    GY + + ++LF
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILF  270

771) BACI_c54270 in NC_014335


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  157 bits (578),  Expect = 8e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

772) LA14_1285 in NC_021181


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  157 bits (578),  Expect = 8e-40, Method: Compositional matrix adjust.
 Identities = 132/316 (42%), Positives = 208/316 (66%), Gaps = 20/316 (6%)

Query  3    KLSIVVPCYNEEESIPLFYNAVEKVMQTILDLDYEYWFVNDGSSDKSLEEMRQLQKNDPE  62
            K+S+VVP +NEEE+IP+FY++V +  Q +   + E  F+NDGS D +   +  L  +DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  63   HVHYVSFSRNFGKEAALYAGLQASIGDYIVVMDVDLQDPPEFLPEMYNYIKTGKYDCIGT  122
             V  +SF+RNFGKE+AL+AGL+ + GD ++ +DVDLQDP E +P++ +  ++G  + + +
Sbjct  61   VVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  123  RRVDRKGEAKFKSFLSDMFYKLVNKISNTEIVSGARDYRMMTRQMVDAVLSMPEYNRFSK  182
            +R DR  ++++K   ++ FYKL NKIS   I     D+R+M+R++V+ +  +PE N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  183  GIFSWVGFKTKYLDYHNVERVAGESDWNTWKLFKYAMDGIADFSQAPLN----IAVWIGT  238
            GI+SWVG +T  ++Y   ERVAG S  N WKL + A++GI+ FS  PL     I++ +++
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  239  TSFI----LSIIGLVFVIVRHFIDTNSSVFGWASMVSiilllgglqllcigilgKYLGRI  294
             SF+    + I  LVF          ++V G +S++  IL+LGG+QL+ IG+LG Y+GRI
Sbjct  239  ISFLYGAWMIIDTLVF---------GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRI  289

Query  295  YLQVKNRPIYIIKEKK  310
            YL+ K+RP YI+K  +
Sbjct  290  YLETKSRPKYILKKGR  305

773) LBA1283 in NC_006814


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  157 bits (578),  Expect = 8e-40, Method: Compositional matrix adjust.
 Identities = 132/316 (42%), Positives = 208/316 (66%), Gaps = 20/316 (6%)

Query  3    KLSIVVPCYNEEESIPLFYNAVEKVMQTILDLDYEYWFVNDGSSDKSLEEMRQLQKNDPE  62
            K+S+VVP +NEEE+IP+FY++V +  Q +   + E  F+NDGS D +   +  L  +DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  63   HVHYVSFSRNFGKEAALYAGLQASIGDYIVVMDVDLQDPPEFLPEMYNYIKTGKYDCIGT  122
             V  +SF+RNFGKE+AL+AGL+ + GD ++ +DVDLQDP E +P++ +  ++G  + + +
Sbjct  61   VVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  123  RRVDRKGEAKFKSFLSDMFYKLVNKISNTEIVSGARDYRMMTRQMVDAVLSMPEYNRFSK  182
            +R DR  ++++K   ++ FYKL NKIS   I     D+R+M+R++V+ +  +PE N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  183  GIFSWVGFKTKYLDYHNVERVAGESDWNTWKLFKYAMDGIADFSQAPLN----IAVWIGT  238
            GI+SWVG +T  ++Y   ERVAG S  N WKL + A++GI+ FS  PL     I++ +++
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  239  TSFI----LSIIGLVFVIVRHFIDTNSSVFGWASMVSiilllgglqllcigilgKYLGRI  294
             SF+    + I  LVF          ++V G +S++  IL+LGG+QL+ IG+LG Y+GRI
Sbjct  239  ISFLYGAWMIIDTLVF---------GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRI  289

Query  295  YLQVKNRPIYIIKEKK  310
            YL+ K+RP YI+K  +
Sbjct  290  YLETKSRPKYILKKGR  305

774) YBT020_27100 in NC_017200


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (576),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 128/301 (43%), Positives = 202/301 (68%), Gaps = 2/301 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNNINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKIADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R + + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllY-TITVKVFGHGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIV  303
                  I   VFG+  + G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+
Sbjct  243  YGAWMIIDTLVFGNPVR-GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  304  K  304
            K
Sbjct  302  K  302

775) llmg_0600 in NC_009004


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 130/308 (43%), Positives = 209/308 (68%), Gaps = 8/308 (2%)

Query  5    RLSIIVPAYNEEETLEIFLNEVNKQTIEL-PLEKTYFFINDGSTDNTLEVIKELSNKYDN  63
            ++S++VP +NEEE++ +F + V ++  EL P E    FINDGS D T  +I+ L+     
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VKYISFSRNFGKEAALIAGLEVSDGEFITVMDADLQDPPEMLNEMFAKITEGYDVVGTRR  123
            V  +SF+RNFGKE+AL+AGL+ + G+ +  +D DLQDP E++ +++ K   G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  VSRIGEPPIRSFFAKTFYKLINKISDTEMVDGVRDFRLMTRQVVDSILKLKENNRFSKGI  183
              R  +  ++   A  FYKL NKIS   + + V DFRLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGFKTTYLPYENRERVAGNT---SWNFFSLLKYSIDGIVNFSEAPLNIATFVGfvsf  240
            +SWVG +T  + Y   ERVAG +   +W++ +L   +++GI +FS  PL + T++G+   
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  ltscllslfyllktlIFGDAVQGFPTlivlilllgglqllsigiigKYIAKIFLETKKRP  300
              S L +   ++ TL+FG++V+G+P+L+V IL+LGG+QL++IG++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  NYIIKESN  308
            +YI+K + 
Sbjct  298  KYILKKGR  305

776) LLNZ_03080 in NC_017949


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 130/308 (43%), Positives = 209/308 (68%), Gaps = 8/308 (2%)

Query  5    RLSIIVPAYNEEETLEIFLNEVNKQTIEL-PLEKTYFFINDGSTDNTLEVIKELSNKYDN  63
            ++S++VP +NEEE++ +F + V ++  EL P E    FINDGS D T  +I+ L+     
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV-REFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  64   VKYISFSRNFGKEAALIAGLEVSDGEFITVMDADLQDPPEMLNEMFAKITEGYDVVGTRR  123
            V  +SF+RNFGKE+AL+AGL+ + G+ +  +D DLQDP E++ +++ K   G ++V ++R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  124  VSRIGEPPIRSFFAKTFYKLINKISDTEMVDGVRDFRLMTRQVVDSILKLKENNRFSKGI  183
              R  +  ++   A  FYKL NKIS   + + V DFRLM+R+VV++I  L E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  184  FSWVGFKTTYLPYENRERVAGNT---SWNFFSLLKYSIDGIVNFSEAPLNIATFVGfvsf  240
            +SWVG +T  + Y   ERVAG +   +W++ +L   +++GI +FS  PL + T++G+   
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVA  237

Query  241  ltscllslfyllktlIFGDAVQGFPTlivlilllgglqllsigiigKYIAKIFLETKKRP  300
              S L +   ++ TL+FG++V+G+P+L+V IL+LGG+QL++IG++G YI++I+LETK RP
Sbjct  238  SISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  301  NYIIKESN  308
            +YI+K + 
Sbjct  298  KYILKKGR  305

777) Hneap_1526 in NC_013422


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 124/307 (41%), Positives = 198/307 (65%), Gaps = 9/307 (2%)

Query  6    VRISCVVPAFNEAANLPNLLTQLSMQLGELSD-HWEIIVVDDGSRDRTRAVLAEYADTPG  64
            ++IS VVP FNE   +P +   +  ++ EL   + EI+ ++DGS+D T +++   A +  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  65   LVV-LHFSRNFGKEAALSAGLDRVRGDVCFMLDADLQHPVALMPQMLAAWREGAQMVYFV  123
            LVV L F+RNFGKE+AL AGLD+  GD  + +D DLQ+P+ ++P+++  W+ GA+MV   
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  124  REHRRDEPFWKRWGSGLLYWLINFGSAVQVPEDAGDFRLLDAKVVAALRALPERNRFMKG  183
            R +R  +   KR  +  +Y L N  S+ ++ E+ GDFRL+   VV  ++ LPERN FMKG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  184  LYAWVGFRTQALPYTPEPRLHGKSHFSGRRLLNLALTGLTAFSNVPLRLWS---VFglil  240
            + +WVG +T+ + Y    R+ G S F+G++L NLAL G+T+FS  PLR+W+   +F   +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  241  allaliyggyVTLAYFIDQRPVAGWTTIVAGLMlfggiqlisigilgEYLGRVYDEVKQR  300
            ++L        TL +     PV G  +++ +++++GG+QLI+IG+LGEY+GR+Y E K R
Sbjct  240  SFLYGAWMIIDTLVF---GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  301  PRYIVDE  307
            P+YI+  
Sbjct  297  PKYILKK  303

778) LJP_0173 in NC_017477


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (574),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 134/310 (44%), Positives = 205/310 (67%), Gaps = 6/310 (1%)

Query  2    KKLSIIVPCYNEEESVPLFYPAVNKVMDTIPDLEPEYWFINDGSKDNTLKEIKELRKKDP  61
             K+S++VP +NEEE++P+FY +V    +  P  E E  FINDGSKD T   I+ L   DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDP  59

Query  62   EHVHFVSFSRNFGKESALYAGLQAATGDYVVVMDVDLQDPPKFLPQMYDLIKTGEYDCIG  121
              V + SF+RNFGKE+AL+AGL+ A+GD V+ +DVDLQDP   +P++ +  ++G  + + 
Sbjct  60   LVVPL-SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVL  117

Query  122  TRRVDRTGEAKFKSFLSDMFYKVVNKISDTEIVPGARDYRMMTRQMVDAVLNMPEYNRFS  181
            ++R DR+ ++++K   ++ FYK+ NKIS   I     D+R+M+R++V+ +  +PE N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  182  KGIFSWVGFKTKYLDYHNVERVAGESDWNTWKLFKYAMDGIADFSQAPLNLAVWIGTGSF  241
            KGI+SWVG +T  ++Y   ERVAG S  N WKL + A++GI+ FS  PL   VW   G F
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLF  235

Query  242  ilsiigliaviirrvlYP-GSSIFGWASMVciilllgglqllcigilgKYIGRVYIQVKN  300
            + SI  L +  +       G+++ G +S++  IL+LGG+QL+ IG+LG YIGR+Y++ K+
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  301  RPIYIIKEKK  310
            RP YI+K  +
Sbjct  296  RPKYILKKGR  305

779) rpoB in NC_018693


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (574),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 126/302 (42%), Positives = 199/302 (66%), Gaps = 0/302 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNNINYEFVFVNDGSIDRTMDILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVDFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             + F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGDGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++ +    G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

Query  305  ET  306
              
Sbjct  303  KG  304

780) BAA_5713 in NC_012659


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

781) GBAA_5684 in NC_007530


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

782) BA_5684 in NC_003997


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

783) BAMEG_5730 in NC_012581


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

784) H9401_5427 in NC_017729


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

785) BAS5287 in NC_005945


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

786) BCA_5585 in NC_012472


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

787) BCAH820_5528 in NC_011773


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

788) bcf_27280 in NC_016779


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

789) BALH_4936 in NC_008600


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

790) BT9727_5112 in NC_005957


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKVADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R V + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRivmslgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllYTITVKIIGNGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

791) TC41_2715 in NC_017167


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  155 bits (573),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 98/222 (45%), Positives = 154/222 (70%), Gaps = 0/222 (0%)

Query  1    MVVPVFNEEDVILTTHERLTAVLDGLPLSWEVLYVDDGSTDASPALLDRLAEGDPRVRVI  60
            +VVPVFNEE+ I      +    +  P   E+++++DGS DA+ ++++ LA +DP V  +
Sbjct  5    LVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPL  64

Query  61   HFARNFGHQLAITAGIDAAMGDAVVVIDADLQDPPDLIPELVAKWREGYEVVLARRAIRF  120
             F+RNFG + A+ AG+D A GDAV+ ID DLQDP ++IP+L+ KW+ G E+VLA+R+ R 
Sbjct  65   SFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRS  124

Query  121  GETWFKRATAAAFYRVLNRLTDVEIPVDVGDFRLMDRKVCDVLRALPEHRRFVRGLVAWM  180
             + ++KR TA  FY++ N+++   I  +VGDFRLM R V + ++ LPE+  F++G+++W+
Sbjct  125  TDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWV  184

Query  181  GFRQAEVEYVRQPRFAGESKYPLRRMVRLALDAVTSFSTRPL  222
            G +   VEYVR  R AG SK+  +++  LAL+++TSFST PL
Sbjct  185  GGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPL  226

792) CLL_A2508 in NC_010674


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  155 bits (571),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 126/311 (41%), Positives = 205/311 (66%), Gaps = 22/311 (7%)

Query  7    LVIPCYNEE---AVLHETAKRLLVKMNSMIDKDFIAHDSKILFVNDGSKDKTWNIIEELH  63
            LV+P +NEE   +V+  T + +         +++ + +  I+F+NDGSKD T +II+ L 
Sbjct  5    LVVPVFNEEEAIPVFYKTVREF---------QELKPYEVEIVFINDGSKDATESIINALA  55

Query  64   AQNPIFSGVNLSRNKGHQNALLAGLMTAKNYADITISLDADLQDDIEVIDKFVEEYYSGS  123
              +P+   ++++RN G + AL+AGL  A   +D  I++D DLQD IEVI  ++E   +G+
Sbjct  56   VSDPLVVPLSFTRNFGKEPALFAGLDHAS--GDAVIPIDVDLQDPIEVIPHLIEKWQAGA  113

Query  124  DVVYGVRSSRKTDTFFKRTTALGFYKFMNALGVDVMYNH-ADYRLMSKRALEGLNQFKEV  182
            ++V + RS R TD  +KR TA  FYK+ N ++   + ++ +D+RLMS+  +E ++ + E 
Sbjct  114  EMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPER  173

Query  183  NLFLRGIVPLIGYKYSVVEYERHERFAGESKYPLKKMLAFALDGITSFSIKPIRIITGLG  242
            NLF++GI++ +G +  VVEY R ER AG SK+   K+  +AL+GITSFS  P+R+     
Sbjct  174  NLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV---WT  230

Query  243  FFIFFVSFIALIYS--LIVKFL--GNTVTGWTSLTLSIWMLGGIQLLSLGVIGEYIGKIY  298
            ++ +FV+ I+++Y+  +I+  L  GN V G  SL +SI  LGG+QL+++GV+GEYIG+IY
Sbjct  231  YIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIY  290

Query  299  NETKQRPRFII  309
             ETK RP++I+
Sbjct  291  LETKSRPKYIL  301

793) lhv_0838 in NC_010080


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  155 bits (571),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 125/309 (41%), Positives = 203/309 (66%), Gaps = 6/309 (1%)

Query  2    KNLSIVVPCFNEQETVPLFYAATQKVLQKMPVKAEYWLVDDGSKDNTLQEIKKLHQENPA  61
             ++S+VVP FNE+E++P+FY + +   +  P   E  +++DGSKD T   I+ L   +P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VHYISFSRNFGKESAIYAGLKAATGDYIVLMDVDLQDPPEFLPKMYRLLQTGKYDAVGCR  121
            V  +SF+RNFGKE+A++AGL  A+GD ++ +DVDLQDP E +P +    Q+G  + V  +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  122  RVDRTGESKFKSFLSDQFYKVINKISKTEIVPGARDYRMMTRQMVNAVLSMPEYSRFSKG  181
            R DR+ ++++K   ++ FYK+ NKIS   I     D+R+M+R++V+ +  +PE + F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFKTKYLEYHNVERVAGKTDWTTKKLFKYALSGIADFSQAPLDLSVCIGIISFIL  241
            I+SWVG +T  +EY   ERVAG +     KL + AL GI+ FS  PL +   IG+  F+ 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL--FVA  237

Query  242  SIAGL--IFVIVRKIITPSSSIFGWASLVSiilliggiqllclgiigRYVGRIYLQVKNR  299
            SI+ L    +I+  ++  ++++ G +SL+  IL++GG+QL+ +G++G Y+GRIYL+ K+R
Sbjct  238  SISFLYGAWMIIDTLVF-GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PIYIVKEKK  308
            P YI+K  +
Sbjct  297  PKYILKKGR  305

794) Pjdr2_0086 in NC_012914


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  154 bits (569),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 208/306 (68%), Gaps = 4/306 (1%)

Query  4    RYSIIVPMYNEEEVIRHTYAKLKEVMDGYGEPYE--LVFVNDGSKDRTVEIVEGVCQQDS  61
            + S++VP++NEEE I   Y  ++E  +    PYE  +VF+NDGSKD T  I++++   D+
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQEL--KPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  62   NVRLVNFSRNFGHQIAITAGMDYAQGdaiiiidadLQDPPEVMLEMIAKWKEGYEVVYGK  121
             V  ++F+RNFG + A+ AG+D A GDA+I ID DLQDP EV+ ++I KW+ G E+V +K
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  122  RLKRKGETFFKKITAMMFYRTMRSLTNFDIPMDTGDFRLIDRKVCDVLRGLKEKNRFVRG  181
            R  R  +  +K+ TA  FY+    ++   I  + GDFRL+ R V + ++ L E+N F++G
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  LVSWVGFRQTMVEYVREERFAGETKYPLKKMINFAVDGITSFSYKPLKIASYIGFTLSAT  241
            ++SWVG +  +VEYVR ER AG +K+   K+ N+A++GITSFS  PL++ +YIG+ +++ 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  242  SFVYLLVVLCQRLFTSSTVAGWTTIVAINllfngiilmllgligeyigRIYDESKNRPLY  301
            SF+Y   ++ + L  ++ V G  +++   L++ G+ L+ +G++GEYIGRIY E+K+RP Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  302  IVREAR  307
            I++ +R
Sbjct  300  ILKKGR  305

795) LVIS_1575 in NC_008497


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  154 bits (568),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 114/280 (41%), Positives = 183/280 (66%), Gaps = 12/280 (4%)

Query  9    EPEYIFVDDGSSDHTLDEMKQLHQRYPETVHYRSFSRNFGKESALAAGLQATTGDLVAVM  68
            E E +F++DGS D T   ++ L    P  V   SF+RNFGKE+AL AGL+ ++GD V  +
Sbjct  33   EVEIVFINDGSKDATESIINALAVSDPLVVPL-SFTRNFGKEPALFAGLDHASGDAVIPI  91

Query  69   DVDLQDPPELLPKMFALIEN--DGYDCVGTVQKERRGQSKLRAFLSSSFYRVINWLSDVH  126
            DVDLQDP E++P    LIE+   G + V + + +R  +++L+   +  FY++ N +S   
Sbjct  92   DVDLQDPIEVIPH---LIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPK  148

Query  127  IEPNARDYRLMTRQYVDTVLSLPEFNRFSKGIFSWVGFKTTYLAYESQPRAAGTTHWNLR  186
            IE N  D+RLM+R+ V+ +  LPE N F KGI+SWVG +T  + Y    R AG +  N +
Sbjct  149  IEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGW  208

Query  187  QLFAYSIEGIIDFSDAPLRLATWIGSLSFLLSIVGLIF---VIVRALTVGGAVAGWPSLV  243
            +L   ++EGI  FS  PLR+  W   ++++++ +++++   +I+ +L  G +V G PSL+
Sbjct  209  KLWNLALEGITSFSTFPLRV--W-TYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLL  265

Query  244  VIMLLVGGIQLFCLGILGQYISKIYLETKHRPKYIIREEQ  283
            V +L++GG+QL+ +G+LG+YI++IYLETK RPKYI++  +
Sbjct  266  VSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKGR  305

796) lhe_0809 in NC_021744


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 124/309 (41%), Positives = 203/309 (66%), Gaps = 6/309 (1%)

Query  2    KNLSIVVPCFNEQETVPLFYAATQKVLQKMPVKAEYWLVDDGSKDNTLQEMKKLHQENPA  61
             ++S+VVP FNE+E++P+FY + +   +  P   E  +++DGSKD T   ++ L   +P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VHYISFSRNFGKESAIYAGLKAATGDYIVLMDVDLQDPPEFLPKMYRLLQTGKYDAVGCR  121
            V  +SF+RNFGKE+A++AGL  A+GD ++ +DVDLQDP E +P +    Q+G  + V  +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  122  RVDRTGESKFKSFLSDQFYKVINKISKTEIVPGARDYRMMTRQMVNAVLSMPEYSRFSKG  181
            R DR+ ++++K   ++ FYK+ NKIS   I     D+R+M+R++V+ +  +PE + F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFKTKYLEYHNVERVAGKTDWTTKKLFKYALSGIADFSQAPLDLSVCIGIISFIL  241
            I+SWVG +T  +EY   ERVAG +     KL + AL GI+ FS  PL +   IG+  F+ 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL--FVA  237

Query  242  SIAGL--IFVIVRKIITPSSSIFGWASLVSiilliggiqllclgiigRYVGRIYLQVKNR  299
            SI+ L    +I+  ++  ++++ G +SL+  IL++GG+QL+ +G++G Y+GRIYL+ K+R
Sbjct  238  SISFLYGAWMIIDTLVF-GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PIYIVKEKK  308
            P YI+K  +
Sbjct  297  PKYILKKGR  305

797) WANG_0857 in NC_015602


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  154 bits (568),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 126/309 (41%), Positives = 203/309 (66%), Gaps = 6/309 (1%)

Query  2    KNLSIVVPCFNEQETVPLFYAATQKVLQKMPVKAEYWLVDDGSKDNTLQEIKKLHQENPA  61
             ++S+VVP FNE+E++P+FY + +   +  P   E  +++DGSKD T   I+ L   +P 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VHYISFSRNFGKESAIYAGLKAATGDYIVLMDVDLQDPPEFLPKMYRLLQTGKYDAVGCR  121
            V  +SF+RNFGKE+A++AGL  A+GD ++ +DVDLQDP E +P +    Q+G  + V  +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  122  RVDRTGESKFKSFLSDQFYKVINKISKTEIVPGARDYRMMTRQMVNAVLSMPEYSRFSKG  181
            R DR+ ++++K   ++ FYK+ NKIS   I     D+R+M+R++V+ +  +PE + F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  182  IFSWVGFKTKYLEYHNVERVAGKTDWTTKKLFKYALSGIADFSQAPLDLSVWIGIISFIL  241
            I+SWVG +T  +EY   ERVAG +     KL + AL GI+ FS  P  L VW  I  F+ 
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP--LRVWTYIGLFVA  237

Query  242  SIAGL--IFVIVRKIITPSSSIFGWASLVSiilliggiqllclgiigHYVGRIYLQVKNR  299
            SI+ L    +I+  ++  ++++ G +SL+  IL++GG+QL+ +G++G+Y+GRIYL+ K+R
Sbjct  238  SISFLYGAWMIIDTLVF-GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PIYIVKEKK  308
            P YI+K  +
Sbjct  297  PKYILKKGR  305

798) LGAS_0170 in NC_008530


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  153 bits (563),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 134/311 (44%), Positives = 208/311 (67%), Gaps = 8/311 (2%)

Query  2    KKLSIIVPCYNEEESVPLFYPAVNKVMDTIPDLEPEYWFINDGSKDNTLKEIKELRKKDP  61
             K+S++VP +NEEE++P+FY +V    +  P  E E  FINDGSKD T   I+ L   DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKP-YEVEIVFINDGSKDATESIINALAVSDP  59

Query  62   EHVHFVSFSRNFGKESALYAGLQAATGDYVVVMDVDLQDPPKFLPQMYDLIKTGEYDCIG  121
              V  +SF+RNFGKE+AL+AGL+ A+GD V+ +DVDLQDP   +P++ +  ++G  + + 
Sbjct  60   LVVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVL  117

Query  122  TRRVDRTGEAKFKSFLSDMFYKVVNKISDTEIVPGARDYRMMTRQMVNAVLDMPEYNRFS  181
            ++R DR+ ++++K   ++ FYK+ NKIS   I     D+R+M+R++V+ +  +PE N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  182  KGIFSWVGFKTKYLDYHNVERVAGESDWNTWKLFKYAMDGIADFSQAPLNLAVW--IGTg  239
            KGI+SWVG +T  ++Y   ERVAG S  N WKL + A++GI+ FS  PL   VW  IG  
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLF  235

Query  240  sfvlsiigliiviirrALYPGSSIFGWASMVciilllgglqllcigilgKYIGRVYIQVK  299
               +S++    +II   ++ G+++ G +S++  IL+LGG+QL+ IG+LG YIGR+Y++ K
Sbjct  236  VASISFLYGAWMIIDTLVF-GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  NRPIYIIKEKK  310
            +RP YI+K  +
Sbjct  295  SRPKYILKKGR  305

799) BMD_4081 in NC_014103


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  153 bits (564),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 200/301 (67%), Gaps = 2/301 (0%)

Query  5    ISIVVPMYFEEEVANECYNRLLSVMHKNHINYEFIFVNDGSTDRTIEILKDVAAMDSNVK  64
            IS+VVP++ EEE     Y+ +    + +  + E++F+NDGS D T  I++ +A  D+ V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   VIDFARNFGHQTAVTAGIDYAQGDAIVIIDADLQDPPEMIPELIAKWQQGYEIVYAKRKK  124
             + F+RNFG + A+ AG+D A GDA++ ID DLQDP E+IP+LI KWQ G E+V AKR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RSGETFFKLATAKYFYRFLNYMSDIEIPKDTGDFRIIDRKVADVFKKMTERNRFVRGMMS  184
            RS +  +K  TA  FY++ N +S   I  + GDFR++ R V + +K + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WIGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIGFSTKPLRL-VMvigllsvfvsl  243
            W+G +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +  +++ +  L
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  244  lvlsysivvwliGKNIQPGWTSIMVAITFFSgiqllglglvgqYIARIYDESKNRPIYVV  303
                  I   ++G+ ++ G  S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP Y++
Sbjct  243  YGAWMIIDTLVFGNPVR-GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  304  R  304
            +
Sbjct  302  K  302

800) BMWSH_1134 in NC_017138


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  153 bits (564),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 200/301 (67%), Gaps = 2/301 (0%)

Query  5    ISIVVPMYFEEEVANECYNRLLSVMHKNHINYEFIFVNDGSTDRTIEILKDVAAMDSNVK  64
            IS+VVP++ EEE     Y+ +    + +  + E++F+NDGS D T  I++ +A  D+ V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   VIDFARNFGHQTAVTAGIDYAQGDAIVIIDADLQDPPEMIPELIAKWQQGYEIVYAKRKK  124
             + F+RNFG + A+ AG+D A GDA++ ID DLQDP E+IP+LI KWQ G E+V AKR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RSGETFFKLATAKYFYRFLNYMSDIEIPKDTGDFRIIDRKVADVFKKMTERNRFVRGMMS  184
            RS +  +K  TA  FY++ N +S   I  + GDFR++ R V + +K + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WIGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIGFSTKPLRL-VMvigllsvfvsl  243
            W+G +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +  +++ +  L
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  244  lvlsysivvwliGKNIQPGWTSIMVAITFFSgiqllglglvgqYIARIYDESKNRPIYVV  303
                  I   ++G+ ++ G  S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP Y++
Sbjct  243  YGAWMIIDTLVFGNPVR-GYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  304  R  304
            +
Sbjct  302  K  302

801) BCZK5129 in NC_006274


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  153 bits (566),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 125/300 (42%), Positives = 199/300 (67%), Gaps = 0/300 (0%)

Query  5    ISVVVPMYFEEEVAQECYNRLKSVMLQNDINYEFVFVNDGSTDRTMEILSEIAANDYRTK  64
            IS+VVP++ EEE     Y+ ++     +  + E+VF+NDGS D T  I++ +A +D    
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  65   IVNFARNFGHQVAVTAGIAAAKGDAIVIIDADLQDPPEVIPELIAKWEEGYEVVYAKRKQ  124
             ++F+RNFG + A+ AG+  A GDA++ ID DLQDP EVIP+LI KW+ G E+V AKR +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  125  RKGETWFKLLTAKYFYKFLNYMSDIDIPKDTGDFRIIDRKIADVFNQMTERNRFIRGMMS  184
            R  + ++K  TA  FYK+ N +S   I  + GDFR++ R + + ++ + ERN F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  185  WVGFRQTYVEYERDERFAGETKYPLKKMIKFASDGIIAFSTKPLRIVMtlgllsvlisii  244
            WVG +   VEY R ER AG +K+   K+ ++A +GI +FST PLR+   +GL+   IS++
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  245  vllytitvKIIGTGTQTGWASIMVAITFFSgiqllglgivgqYIARIYDESKNRPIYIVK  304
                 I   ++      G +S++V+I F++G+QL+G+G++G+YI+RIY E+K+RP YI+K
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

802) LAF_1409 in NC_010610


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  152 bits (562),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 126/310 (41%), Positives = 203/310 (66%), Gaps = 8/310 (2%)

Query  3    KLSIVVPCYNEQKVLPLFYSAVEEVVQKIKNLEVEYWLVDDGSADQTLAEMRKLHTDDPK  62
            K+S+VVP +NE+  +P+FY +V E  Q +K  EVE  +++DGS D T + +  L   DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  63   RVHYLTFSRNFGKESAMYAGLSVATGDYVVIMDADLQDPPSFLQQMYSIMQGGEYDCVAT  122
             V  L+F+RNFGKE+A++AGL  A+GD V+ +D DLQDP   + ++    Q+G  + V +
Sbjct  61   VVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  123  RRTDRTGEAKFKSFLSDQFYKVINRISQTNIVPGARDFRMMSRQMVDAVLSMREYSRFSK  182
            +R+DR+ ++++K   ++ FYK+ N+IS  +I     DFR+MSR++V+ +  + E + F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  183  GIFSWVGFKTKYLEYKNVERVAGTTDWSTWKLFKYAMDGIADFSQAPLSLAVWLGTTSFI  242
            GI+SWVG +T  +EY   ERVAG +  + WKL + A++GI+ FS  PL   VW     F+
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFV  236

Query  243  VSILGLIFV--IIRRILEPSSSAFGWASMvciilllgglqllcigivgKYIGSIYMQVKN  300
             SI ++++   +I   L  +++  G +S++  IL+LGG+QL+ IG++G YIG IY++ K+
Sbjct  237  ASI-SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  301  RPIYIIKEKK  310
            RP YI+K  +
Sbjct  296  RPKYILKKGR  305

803) CLH_2276 in NC_010723


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  152 bits (561),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 116/274 (43%), Positives = 186/274 (68%), Gaps = 10/274 (3%)

Query  41   DSKILFVNDGSKDKTWTIIEDLHSQNPIFSGVNLSRNKGHQNALLAGLMTAKDYADITIS  100
            +  I+F+NDGSKD T +II+ L   +P+   ++++RN G + AL+AGL  A   +D  I+
Sbjct  33   EVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHAS--GDAVIP  90

Query  101  LDADLQDDIEVIDKFVEEYYSGSDVVYGVRSSRKTDTFFKRTTALGFYKFMNALGVDVMY  160
            +D DLQD IEVI  ++E   +G+++V + RS R TD  +KR TA  FYK+ N ++   + 
Sbjct  91   IDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIE  150

Query  161  NH-ADYRLMSKRALDGLSQFKEVNLFLRGIVPLIGYKYSVVEYERHERFAGESKYPLKKM  219
            ++ +D+RLMS+  ++ +  + E NLF++GI++ +G +  VVEY R ER AG SK+   K+
Sbjct  151  ENVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKL  210

Query  220  LAFALDGITSFSIKPIRIITGLGFFIFFVSFIALIYS--LIVKFL--GKTVTGWTSLTLS  275
              +AL+GITSFS  P+R+     ++ +FV+ I+++Y+  +I+  L  G+ V G  SL +S
Sbjct  211  WNLALEGITSFSTFPLRV---WTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVS  267

Query  276  IWMLGGIQLLSLGVIGEYIGKIYNETKQRPRFII  309
            I  LGG+QL+++GV+GEYIG+IY ETK RP++I+
Sbjct  268  ILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

804) LBHH_1315 in NC_017467


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  152 bits (561),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 126/307 (42%), Positives = 200/307 (66%), Gaps = 6/307 (1%)

Query  1    MSIVVPCFNEQKTVPLFYAATQKVLQKMPVKAEYWLVDDGSKDNTLQEIKKLHQENPAVH  60
            +S+VVP FNE+ ++P+FY + +   +  P   E  +++DGSKD T   I+ L   +P V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  61   YISFSRNFGKESAIYAGLKAATGDYIVLMDVDLQDPPEFLPKMYRLLQTGKYDAVGCRRV  120
             +SF+RNFGKE+A++AGL  A+GD ++ +DVDLQDP E +P +    Q+G  + V  +R 
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKRS  121

Query  121  DRTGESKFKSFLSDQFYKVINKISKTEIVPGARDYRMMTREMVNAVLSMPEYSRFSKGIF  180
            DR+ ++++K   ++ FYK+ NKIS   I     D+R+M+RE+V+ +  +PE + F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  181  SWVGFKTKYLEYHNVERVAGKTDWTTKKLFKYALSGIADFSQAPLDLSVWIGIISFILSI  240
            SWVG +T  +EY   ERVAG +     KL + AL GI+ FS  P  L VW  I  F+ SI
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP--LRVWTYIGLFVASI  239

Query  241  AGL--IFVIVRKIITPSSSIFGWASLVSiilliggiqllclgiigRYVGRIYLQVKNRPI  298
            + L    +I+  ++  ++++ G +SL+  IL++GG+QL+ +G++G Y+GRIYL+ K+RP 
Sbjct  240  SFLYGAWMIIDTLVF-GNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  299  YIVKEKK  305
            YI+K  +
Sbjct  299  YILKKGR  305

805) smi_0669 in NC_013853


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  152 bits (562),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 207/308 (68%), Gaps = 10/308 (3%)

Query  1    MVISIIVPCLNEEEVLPLFYQAMEALLPDLET-EIEYVFVDDGSSDGTLELLKAYREQNP  59
            M IS++VP +NEEE +P+FY+++  +  +L   E+E VF++DGS D+T  +++A    +P
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAALYAGVQYATGDLVVVMDADLQDPPSMLLEMKNLLDQNADLDCVG  119
             V  +SF+RNFGKE+AL+AG++ A+GD V+ +D DLQDP  ++ ++ +  +  A++  V 
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VL  117

Query  120  TRRTSREGEPFFRSFCADLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFS  179
            ++R+ R  +  ++   A+ FY+L +KIS   +   V DFR+M R VV+ I  L E N F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFAWVGFKTHYLDYPNVERQAGKT---SWTFRQLFFYSIEGIVNFSDFPLIIAFVAGL  236
            KG+++WVG +T+ ++Y   ER AG +   +W +++L   ++EGI +FS FPL +    GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL  234

Query  237  LSCFISlfttlfvvvrtlllGNPTSGWTSLMAiilflggiqlltigilgKYISKIYLETK  296
            +   IS++    +++ TL++GNP  G  SL+  ILFLGG+QL+ IG+LG YI++IYLETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  297  KRPLYLIK  304
             RP Y++K
Sbjct  295  SRPKYILK  302

806) str1485 in NC_006449


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 127/304 (42%), Positives = 200/304 (66%), Gaps = 2/304 (0%)

Query  2    KTLAIVVPCYNEEETIPPFLEACQAVERQMANQLIFNYYFVNDGSKDRTLDVLRQVSKQF  61
              +++VVP +NEEE+IP F  + +  +   + ++  +  F+NDGSKD T  ++  ++   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKEAALYAGLQRATGDYVTVMDADLQDPPELLIEMYAKIQEGYDVVGT  121
              V  LSF+RNFGKE+AL+AGL++A+GD V  +D DLQDP E++ ++  K Q G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPPIRSFFAKAFYWLINKVSDTELVDGARDFRLMTRQVVDAILELKEVNRFSK  181
            +R+DR  +  ++   A  FY L NK+S   + +   DFRLM+R+VV+ I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVAYVSYENRERVAGETSWSFWKLLNYSLDGFINFSEVPLKLATWAGTFSFL  241
            G++SWVG +   V Y   ERVAG +  + WKL N +L+G+ +FS  PL++ T  G F   
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  ISLVGIFFVVIRKLTIGGSVAGWASLVSiilfiggiqllalgiigNYISKIFLETKKRPV  301
            IS++    ++I  L +G +V G +SL+  ILF+GG+QL+++G++G+YI++I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YIVK  305
            YI+K
Sbjct  299  YILK  302

807) STER_1446 in NC_008532


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 127/304 (42%), Positives = 200/304 (66%), Gaps = 2/304 (0%)

Query  2    KTLAIVVPCYNEEETIPPFLEACQAVERQMANQLIFNYYFVNDGSKDRTLDVLRQVSKQF  61
              +++VVP +NEEE+IP F  + +  +   + ++  +  F+NDGSKD T  ++  ++   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKEAALYAGLQRATGDYVTVMDADLQDPPELLIEMYAKIQEGYDVVGT  121
              V  LSF+RNFGKE+AL+AGL++A+GD V  +D DLQDP E++ ++  K Q G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPPIRSFFAKAFYWLINKVSDTELVDGARDFRLMTRQVVDAILELKEVNRFSK  181
            +R+DR  +  ++   A  FY L NK+S   + +   DFRLM+R+VV+ I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVAYVSYENRERVAGETSWSFWKLLNYSLDGFINFSEVPLKLATWAGTFSFL  241
            G++SWVG +   V Y   ERVAG +  + WKL N +L+G+ +FS  PL++ T  G F   
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  ISLVGIFFVVIRKLTIGGSVAGWASLVSiilfiggiqllalgiigNYISKIFLETKKRPV  301
            IS++    ++I  L +G +V G +SL+  ILF+GG+QL+++G++G+YI++I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YIVK  305
            YI+K
Sbjct  299  YILK  302

808) STND_1417 in NC_017563


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 127/304 (42%), Positives = 200/304 (66%), Gaps = 2/304 (0%)

Query  2    KTLAIVVPCYNEEETIPPFLEACQAVERQMANQLIFNYYFVNDGSKDRTLDVLRQVSKQF  61
              +++VVP +NEEE+IP F  + +  +   + ++  +  F+NDGSKD T  ++  ++   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKEAALYAGLQRATGDYVTVMDADLQDPPELLIEMYAKIQEGYDVVGT  121
              V  LSF+RNFGKE+AL+AGL++A+GD V  +D DLQDP E++ ++  K Q G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPPIRSFFAKAFYWLINKVSDTELVDGARDFRLMTRQVVDAILELKEVNRFSK  181
            +R+DR  +  ++   A  FY L NK+S   + +   DFRLM+R+VV+ I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVAYVSYENRERVAGETSWSFWKLLNYSLDGFINFSEVPLKLATWAGTFSFL  241
            G++SWVG +   V Y   ERVAG +  + WKL N +L+G+ +FS  PL++ T  G F   
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  ISLVGIFFVVIRKLTIGGSVAGWASLVSiilfiggiqllalgiigNYISKIFLETKKRPV  301
            IS++    ++I  L +G +V G +SL+  ILF+GG+QL+++G++G+YI++I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YIVK  305
            YI+K
Sbjct  299  YILK  302

809) AZC_1472 in NC_009937


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 197/305 (65%), Gaps = 5/305 (1%)

Query  12   DLSIVVPCYNEATGLPFFHERLSAHARKVAEARGMRIEIVYVDDGSRDQTAAVALALKPQ  71
             +S+VVP +NE  ++P F   +    R   E +   +EIV+++DGS+D T ++  AL   
Sbjct  2    KISLVVPVFNEEEAIPVFYKTV----REFQELKPYEVEIVFINDGSKDATESIINALAVS  57

Query  72   GTDVQVVALSRNFGKEAALMAGLDHARGDALLFMDGDGQHPPEMIETFVGLWKDEGYDVA  131
            +  V  ++++RNFGKE+AL AGLDHA GDA++ +D D Q+P E+I  ++  W+  + ++ 
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMV  116

Query  132  YAIKADRMDEPAARRTFVKIFYWLLNFGAQSRIPEDAADFrllspraaaalrrlpERNRF  191
             A ++DR  +   +R     FY L N  + ++I E+ +DFRL+S      ++ LPERN F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  192  FKGLSSWIGFRQKAVPYRPAAREHGTSSWSFLRLLGLSMEGLTSFSPAPLRlagmvgaal  251
             KG+ SW+G +   V Y  A R  G S  +  +L  L++EG+TSFS  PLR+   +G  +
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  252  aaaaflygSWIVIERLVWGIPLPGYPSLVVGLMVIGGVQLLVIGIMGEYIARILSEIKAR  311
            A+ +FLYG+W++I+ LV G P+ GYPSL+V+++ +GGVQL+ IG++GEYI+RI  E K+R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  312  PVYFV  316
            P Y++
Sbjct  297  PKYIL  301

810) Alide_1405 in NC_014910


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (557),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 113/270 (42%), Positives = 182/270 (68%), Gaps = 1/270 (0%)

Query  48   EIVLVDDGSTDATGERMDRW-IRQPGVHALQLSRNFGKeaaltagleaaagaVVVMMDSD  106
            EIV+++DGS DAT   ++   + +P V +L ++RNFGKE+AL AGL+ A+G  V+ +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  107  MQHPPALLDTFVRHWRAGADVVYAVREHRDAETAFKRVGTGWFYRLINHGDRFEVPQGAG  166
            +Q+P  ++  ++  W+AGA++V A R +R ++  +KR  + WFY+L N      + +  G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  167  DFRLMDRRVVQALLALPERNRFMKGLYAWVGFESVAVPYLPDERQHGRSYFNKLRLLRLA  226
            DFRLM R VV+ +  LPERN FMKG+ +WVG ++  V Y+  ER  G S FN  +L  LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  227  FAGLTAFTVWPLRavialgfvlalaafgygaylTLVYLLYGHDVSGWTTIVVSLMLFVGI  286
            + G+T+F+  PLR    +G+ +A  +F YGA + +  L++G+ V G  +++VS++++ G+
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  287  QLVSLGVVGEYVGRIYEEVKRRPLYVVKRE  316
            QL+++GV+GEY+GRIY E K RP Y++K+ 
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILKKG  304

811) Alide2_3511 in NC_015422


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 113/270 (42%), Positives = 182/270 (68%), Gaps = 1/270 (0%)

Query  48   EIVLVDDGSTDATGERMDRW-IRQPGVHALQLSRNFGKeaaltagleaaagaVVVMMDSD  106
            EIV+++DGS DAT   ++   + +P V +L ++RNFGKE+AL AGL+ A+G  V+ +D D
Sbjct  35   EIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVD  94

Query  107  MQHPPALLDTFVRHWRAGADVVYAVREHREAETAFKRVGTGWFYRLINHGDRFEVPQGAG  166
            +Q+P  ++  ++  W+AGA++V A R +R ++  +KR  + WFY+L N      + +  G
Sbjct  95   LQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVG  154

Query  167  DFRLMDRRVVQALLALPERNRFMKGLYAWVGFESVAVPYLPDERQHGRSYFNKLRLLRLA  226
            DFRLM R VV+ +  LPERN FMKG+ +WVG ++  V Y+  ER  G S FN  +L  LA
Sbjct  155  DFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLA  214

Query  227  FAGLTAFTVWPLRavialgfvlalaafgygaylTLVYLLYGHDVSGWTTIVVSLMLFVGI  286
            + G+T+F+  PLR    +G+ +A  +F YGA + +  L++G+ V G  +++VS++++ G+
Sbjct  215  LEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGV  274

Query  287  QLVSLGVVGEYVGRIYEEVKRRPLYVVKRE  316
            QL+++GV+GEY+GRIY E K RP Y++K+ 
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILKKG  304

812) BC5432 in NC_004722


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (557),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASADS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA +D+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNEGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLVSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSiylgllttil  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  gllyVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

813) BCB4264_A5555 in NC_011725


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASADS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA +D+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNDGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLLSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSiylgllttil  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  gllyVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

814) BMB171_C5027 in NC_014171


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (557),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASADS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA +D+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNEGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLVSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSiylgllttil  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  gllyVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

815) csbB in NC_018877


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASADS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA +D+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNDGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLLSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSiylgllttil  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  gllyVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

816) CT43_CH5472 in NC_017208


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASADS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA +D+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNDGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLLSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSiylgllttil  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  gllyVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

817) H175_ch5565 in NC_020376


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 207/306 (68%), Gaps = 3/306 (0%)

Query  1    MTLSIVVPCYNEEKVLRAFYSETSLEIHKLTT-DYEFVFVNDGSKDDTLNILRDLASADS  59
            M +S+VVP +NEE  +  FY     E++ L   + E+VF+NDGSKD T +I+  LA +D+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   SVHYISFSRNFGKEAAMLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNDGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPVRSFVSRLYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLLSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGYNELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSiylgllttil  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  gllyVITTFVQIILGGVEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +++ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

818) SH2190 in NC_007168


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 130/311 (42%), Positives = 202/311 (65%), Gaps = 13/311 (4%)

Query  1    MKIRVIVPCFNEGEVVTKTYDKLTEILMEDSLDKGYDYDLLFVDDGSKDNTIDHVQHLAS  60
            MKI ++VP FNE E +   Y  + E+   + L K Y+ +++F++DGSKD T   ++ LA 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF---QEL-KPYEVEIVFINDGSKDATESIINALAV  56

Query  61   LDQHVKYISFSRNFGKESAMIAGFQHSVKCDAVVMVDGDLQHPPEFIPQMIEGFQEGYDQ  120
             D  V  +SF+RNFGKE+A++AG++H+   DAV+ +D DLQ+P E IP++IE  Q G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHA-SGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAKR-DRTGENIARKSMTKLYYKLINSFVEDIEFIDGVGDFRLLSQRAVKAMSSLKEYN  179
            V+AKR DR+ +   ++  +  +YKL N  +    + + VGDFRL+S+  V  +  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFEWIGYNTKIFTYQNVEREAGHSK---WTFTKLLNYGIDGLISFNNKPLRAMIY  236
             F KG++ W+G +T +  Y   ER AG SK   W   KL N +++G+ SF+  PLR   Y
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGW---KLWNLALEGITSFSTFPLRVWTY  231

Query  237  LGMTifslsivyilylliGIMVNGINNPGYFTTIAAvlliggiqlisigvvgEYIGRIYY  296
            +G+ + S+S++Y   ++I+ +V G    GY + + ++L++GG+QLI+IGV+GEYIGRIY 
Sbjct  232  IGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYL  291

Query  297  EVKQRPKYIVQ  307
            E K RPKYI++
Sbjct  292  ETKSRPKYILK  302

819) Isop_3703 in NC_014962


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (558),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 125/305 (41%), Positives = 195/305 (64%), Gaps = 5/305 (1%)

Query  15   LELSVVVPLYNEEAVVGELHRRLD--LALRGLGVAYEIVFVNDGSKDATAELTAQLVARD  72
            + +S+VVP++NEE  +  + + +     L+   V  EIVF+NDGSKDAT  +   L   D
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  73   PCLRVIHLSRNFGHQAAVCAGIDQARGAAVLVMDGDLQDPPELIPEFYALWKRGWEVVYA  132
            P +  + ++RNFG ++A+ AG+D+A G AV+ +D DLQDP E+IP++   W+ G E+V A
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  133  VRGSRKERG-LKRLGYYLFYRIMAALSDLEIPLDSGDFGLMDRRVVeelkklpekkRFVR  191
             R+ R   G LKR     FY++   +S   I  + GDF LM R VVE++K LPE++ F++
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  192  GLRTFVGFRQVGLEYARSAREAGEPKYTFRGLVRLALDGLVSFSDAPLRLASILGGVAIL  251
            G+ + VG +   +EY R+ R AG +K+  + L  LAL+G+ SFS  PLR+ + +G     
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  252  MALGLGAFTIIDAIWTRTAPPGWASLMTTVLFLGAVQLICVGILGEYLRLIFYETKGRPT  311
            +++  GA  IID++    +  G +SL+ ++LFLG+VQLI +G+LGEY+  I+ ETK+RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  312  YIVGR  316
            YI+ +
Sbjct  299  YILKK  303

820) LC40_0903 in NC_017465


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (557),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 126/310 (41%), Positives = 200/310 (65%), Gaps = 8/310 (2%)

Query  3    KLSIVVPCYNEQKVLPLFYSAVEEVVQKIKNLEVEYWLVDDGSADQTLAEMRKLHTDDPK  62
            K+S+VVP +NE+  +P+FY +V E  Q +K  EVE  +++DGS D T + +  L   DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  63   RVHYLTFSRNFGKESAMYAGLSVATGDYVVIMDADLQDPPSFLQQMYSIMQGGEYDCVAT  122
             V  L+F+RNFGKE+A++AGL  A+GD V+ +D DLQDP   + ++    Q+G  + V +
Sbjct  61   VVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  123  RRTDRTGEAKFKSFLSDQFYKVINRISQTNIVPGARDFRMMSRQMVDAXLSMXEYSRFSK  182
            +R+DR+ ++++K   ++ FYK+ N+IS  +I     DFR+MSR++V+    + E + F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  183  GIFSWVGFKTKYLEYKNVERVAGTTDWSTWKLFKYAMDGIADFSQAPLSLAVWLGTTSFI  242
            GI+SWVG +T  +EY   ERVAG +  + WKL + A++GI+ FS  PL   VW     F+
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFV  236

Query  243  XSIXGLIFVX--IRRXJEPXSSAFGWASMvciilllgglqllcigivgKYIGRIYMQVKN  300
             SI ++++    I       ++  G +S++  IL+LGG+QL+ IG++G YIGRIY++ K+
Sbjct  237  ASI-SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  301  RPIYIIKEKK  310
            RP YI+K  +
Sbjct  296  RPKYILKKGR  305

821) Sinac_3878 in NC_019892


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  151 bits (556),  Expect = 6e-38, Method: Compositional matrix adjust.
 Identities = 129/299 (44%), Positives = 201/299 (68%), Gaps = 1/299 (0%)

Query  30   ISVVVPLHNEQETLVElyrrlslalrslGMTYEIVLVNDGSRDATPGMIARLQESDPALV  89
            IS+VVP+ NE+E++  +Y+ +           EIV++NDGS+DAT ++I  L  SDP +V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  90   ALHLSRNFGHQAAVTAGLDHARGLAVAIMDGDLQDppellpelVALWREGNDVVYAVR-H  148
            +L ++RNFG ++A+ AGLDHA G AV  +D DLQDP E++P+L+  W+ G ++V A R +
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  149  RRQEGVLKRLGYFAFYRLMRAMSDLDIPLDSGDFCLMDRQVVEALKALPERLRFVRGLRS  208
            R  +G LKR     FY+L   +S   I  + GDF LM R+VVE +K LPER  F++G+ S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  209  FVGFRQVGLSYDRPAREAGTSKYPLRRLVALAVDGLVSFSSRPLRMVTYLGIASATSAAA  268
             VG +   + Y R+ R AG SK+  ++L  LA++G+ SFS+ PLR+ TY+G+  A+ +  
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFL  242

Query  269  LMVWALIDAFSTRSAPRGWASTIVVVLFMgsiqlislgiigEYIRMIFLEAKQRPTYLV  327
               W +ID++   ++ RG +S +V +LF+G++QLI++G++GEYI  I+LE+K RP Y++
Sbjct  243  YGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

822) MY9_0949 in NC_017743


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  150 bits (551),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 122/303 (41%), Positives = 203/303 (67%), Gaps = 3/303 (0%)

Query  6    ISIIIPSYNEGYNVKLIHESLKKEFKNI-HYDYEIFFINDGSVDDTLQQIKDLAVTCSRV  64
            IS+++P +NE   + ++  +++ EF+++  Y+ EI FINDGS D T   I+ LAV+ + V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  65   KYISFSRNFGKEAAILAGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQVIAQR-  123
              +SF+RNFGKE+A++AG++H  G+AVI +D DLQ+P  ++ ++I   + G + V+A+R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  NRKGDGFVRSLLSSMYYKFINKAVEVDLRDGVGDFRLLSRQAVNALLKLSEGNRFSKGLF  183
            +R  DG ++   +  +YK+ NK     + + VGDFRL+SR+ V+ +  L+E N F KG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  CWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRLCFYTGifilllsi  243
             W+G +  +V Y   ER  G SK +   L N +++G+ SF+  PLR+  Y G+F+  +S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  iyiiATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLgiigeyigriyyeTKKRPHYLI  303
            +Y    ++  L  G +V GY +++ ++LFLGGVQL+++G++GEYIGRIY ETK RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  304  KEA  306
            K +
Sbjct  302  KKG  304

823) PECL_428 in NC_016605


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  150 bits (551),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 127/314 (41%), Positives = 209/314 (67%), Gaps = 16/314 (5%)

Query  2    KKLSVVVPVYNEEETVNIFYNEFQKVTEKINYETELWFIDDGSKDNTLEEIRRLNNKDNT  61
             K+S+VVPV+NEEE++ +FY+  +   E   YE E+ FI+DGSKD T   I  L   D  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  62   VHYVSFSRNFGKEAGLLAGLERAKGDLVAVMDVDLQDPPELLPKMIRLVE--EDGYDAVA  119
            V  +SF+RNFGKE++L+AGL++A GD V  +DVDLQDP E++P   +L+E  + G + V 
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIP---HLIEKWQAGAEMVL  117

Query  120  TRRKDREGESKIRSFFARMFYRLINKMTNLNLVDGARDFRVMTRQMVKSILKMPERQRFS  179
            ++R DR  +++++   A  FY+L NK++  ++ +   DFR+M+R++V +I  +PER+ F 
Sbjct  118  AKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFM  177

Query  180  KGLFNWVGFNTYYLSFENRERVAGSTSWSFGG--LLKYAIEGFVDFSTTPL---TFVTGL  234
            KG+++WVG +T  + +   ERVAG +   F G  L + A+EG+  FST PL   T++ GL
Sbjct  178  KGILSWVGGQTDVVEYVRAERVAGIS--KFNGWKLWNLALEGITSFSTFPLRVWTYI-GL  234

Query  235  GATSFGLSILGAIIVLVRAIVAPHASAFGWSSMAViilffsglqllslgIVGRYIAEIYL  294
              +S+++ + GA +++   + +    ++  +S+ V ILF++G+QL+++G++G YI+ IYL
Sbjct  235  FVASISF-LYGAWMIIDTLVFGNPVRGY--PSLLVSILFLGGVQLIGIGVLGEYIGRIYL  291

Query  295  EVKSRPVYLVKEEK  308
            E KSRP Y++K  +
Sbjct  292  ETKSRPKYILKKGR  305

824) RUM_23000 in NC_021039


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  150 bits (553),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 119/271 (44%), Positives = 183/271 (68%), Gaps = 10/271 (3%)

Query  44   VMFVNDGSKDRTWEIIEELVAGDTLFQGVKLSRNKGHQNALLAGLMTAKDHCDAAISMDA  103
            ++F+NDGSKD T  II+ L  +D L   + ++RN G + AL+AGL       DA I++D 
Sbjct  36   IVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGL--DHASGDAVIPIDV  93

Query  104  DLQDDINAVDEMIEKFDGGCDIVYGVRSERKTDTFFKKFTAQGYYKLLAMMGVDIVYNH-  162
            DLQD I+ + ++IEK ++G ++V + RS+R TD  +K+ TA+ +YKL   ++   + ++ 
Sbjct  94   DLQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENV  153

Query  163  ADYRLMSRRALQNLESFGEVNLFLRGVVPMIGYKTDKVYYERAERFAGESKYPLKKMLAF  222
            +D+RLMSR  ++N+  + E NLF++G+++ +G +TD V Y RAER AG SK+   K+  +
Sbjct  154  GDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL  213

Query  223  AMEGITSLSVKPIRFITSTGFVIFVISLL----MLIYSLVRYFMGATIPGWTSLAVSVWA  278
            A+EGITS+S  P+R  T  G+ +  IS+L    M+I +LV    G  + G  SL VS+  
Sbjct  214  ALEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLV---FGNPVRGYPSLLVSILF  270

Query  279  IGGLQLLAIGVVGEYIGKIYLETKHRPKYIV  309
            +GG+QL++IGV+GEYIG+IYLETK RPKYI+
Sbjct  271  LGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

825) csbB in NC_006270


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 122/303 (41%), Positives = 200/303 (67%), Gaps = 3/303 (0%)

Query  6    VSIIIPSYNEASNIKLIYESLRNEFQSidy-dyeiyyindGSTDRTLEEIKKLAEKSEHV  64
            +S+++P +NE   I ++Y ++R EFQ +   + EI +INDGS D T   I+ LA     V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  65   KYISFSRNFGKEAAILAGFQHARGDAVVVMDADLQHPTYLLHDFIKGYEEGYDQVVAQR-  123
              +SF+RNFGKE+A++AG++HA GDAV+ +D DLQ+P  ++ ++I   + G + V+A+R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  NRKGDNPVRSYLSSLYYRFINNAVEVDLRDGVGDFRLLSRKAVNAMLKLSEGNRFSKGLF  183
            +R  D  ++   +  +Y++ N+     + + VGDFRL+SR  V+ +  L+E N F KG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  CWIGFDQKIVYYENVERKNGKSKWSFRHLLNYGIDGIVSFNNRPLRMCFYAGIFILFLSL  243
             W+G +  +V Y   ER  G SK + + L N +++GI SF+  PLR+  Y G+F+  +S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  IYIAATFIRILKYGVIVPGYFTIISAVLFLGGVQLLSLgiigeyigriyyeTKKRPHYLI  303
            +Y A  +I  L +G  V GY +++ ++LFLGGVQL+++G++GEYIGRIY ETK RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  304  QEA  306
            + +
Sbjct  302  KKG  304

826) csbB in NC_006322


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  149 bits (550),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 122/303 (41%), Positives = 200/303 (67%), Gaps = 3/303 (0%)

Query  6    VSIIIPSYNEASNIKLIYESLRNEFQSidy-dyeiyyindGSTDRTLEEIKKLAEKSEHV  64
            +S+++P +NE   I ++Y ++R EFQ +   + EI +INDGS D T   I+ LA     V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  65   KYISFSRNFGKEAAILAGFQHARGDAVVVMDADLQHPTYLLHDFIKGYEEGYDQVVAQR-  123
              +SF+RNFGKE+A++AG++HA GDAV+ +D DLQ+P  ++ ++I   + G + V+A+R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  124  NRKGDNPVRSYLSSLYYRFINNAVEVDLRDGVGDFRLLSRKAVNAMLKLSEGNRFSKGLF  183
            +R  D  ++   +  +Y++ N+     + + VGDFRL+SR  V+ +  L+E N F KG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  184  CWIGFDQKIVYYENVERKNGKSKWSFRHLLNYGIDGIVSFNNRPLRMCFYAGIFILFLSL  243
             W+G +  +V Y   ER  G SK + + L N +++GI SF+  PLR+  Y G+F+  +S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  244  IYIAATFIRILKYGVIVPGYFTIISAVLFLGGVQLLSLgiigeyigriyyeTKKRPHYLI  303
            +Y A  +I  L +G  V GY +++ ++LFLGGVQL+++G++GEYIGRIY ETK RP Y++
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  304  QEA  306
            + +
Sbjct  302  KKG  304

827) Amet_0306 in NC_009633


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  149 bits (547),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 100/227 (45%), Positives = 149/227 (66%), Gaps = 1/227 (0%)

Query  6    ISLVVPMYCENEVAKECYKRLKEVMKKHEIPYEMVFINDGSTDETLSILEVIAAQDKKVK  65
            ISLVVP++ E+E     YK ++E         E+VFINDGS D T SI++ +A  D  V 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  66   VISFARNFGHQIAVTAGIKRAQGDAVIVIDADLQDPPELIPEMIKLWEEGYHVVYGKRKK  125
             +SF+RNFG + A+ AG+ +A GDAVI ID DLQDP E+IP++I  W+ G ++V +KR  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  126  RQGETWFKLTTAKYFYRFLNSITEVDIPLDTGDFRLMDRKVVDIFNNMPEKNRFIRGMVS  185
            R  + ++K  TA  FY++ N I+   I  + GDFRLM R VV+ ++ +PE+N F++G++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  186  WIGFKQTAIEYERQERFAGETKYPLKQMLKLAADGILSFSFKPVK-W  231
            W+G +   +EY R ER AG +K+   ++ +LA +GI SFS  P++ W
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVW  229


 Score = 36.1 bits (117),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 24/30 (80%), Gaps = 0/30 (0%)

Query  263  QLFAIGIIGEYVVRIYDEARARPIYTVEKE  292
            QL++IG++GEY+ RIY E+++RP Y + K 
Sbjct  275  QLIGIGVLGEYIGRIYLETKSRPKYILKKG  304

828) CL2_24110 in NC_021016


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  149 bits (547),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 127/307 (42%), Positives = 209/307 (69%), Gaps = 10/307 (3%)

Query  14   IVVPCYNEEQVLAETSKRLKEKCEMLIHDGKIAKESRIVFVDDGSKDHTWNMIDEFHKMD  73
            +VVP +NEE+ ++   K ++E     +++ K + E  IVF++DGSKD T ++I+ +   D
Sbjct  5    LVVPVFNEEEAIPVFYKTVRE-----FQELK-PYEVEIVFINDGSKDATESIINALAVSD  58

Query  74   SIFSGVKLSRNRGHQNALLAGLTMASEKADIVISMDADLQDDINAVDQMIEKYYEGCDIV  133
            ++   + ++RN G + AL+AGL  AS  +D VI++D DLQD I+ + ++IEK   G ++V
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHAS--GDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMV  116

Query  134  YGVRSARDTDTFFKRFTAEAFYKLINKMGGELVYNH-ADYRLMSKRALKGLLEFDEVNIF  192
             + RS R TD  +KR TAE FYKL NK++   + ++ +D+RLMS+  +  +  + E N+F
Sbjct  117  LAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLF  176

Query  193  LRGMVPMVGYQSDIVTYERAERFAGESKYPFKKMLSFAFEGITSLSVKPIKMIFNVGili  252
            ++G+++ VG Q+D+V Y RAER AG SK+   K+ ++A+EGITS+S  P+++   +G+++
Sbjct  177  MKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  253  ciisvlaiiYCLVRHFT-NNTVSGWTSLVMSIWFLGGLQLIAIGMVGQYIGKIYLETKAR  311
              IS L     ++  +   N V G  SL++SI FLGG+QLI+IG++G+YIG+IYLETK+R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  312  PKFIIEQ  318
            PK+I+ +
Sbjct  297  PKYILKK  303

829) GWCH70_1941 in NC_012793


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  149 bits (549),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 124/307 (41%), Positives = 204/307 (67%), Gaps = 10/307 (3%)

Query  6    LTIVVPCYNEEEVLPETIRQLRNLREELIAERLVSPESTLLFVDDGSGDATWDIIYKASL  65
            +++VVP +NEEE +P   + +R+++E      L + E  ++F++DGS DAT  II   ++
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQE------LKPYEVEIVFINDGSKDATESIINALAV  56

Query  66   RYPEVKGVKLARNAGHQNALLAGLFAAKTRSDCIVSIDADLQDDISVIRDFVQKFHEGYE  125
              P V  + ++RN G + AL+AGL    + +D +++ID DLQD I VI ++++K + G E
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGL--DHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAE  114

Query  126  IVYGVRNKRDTDTFFKRHTAQWFYKLMRAMGVDLVYNH-ADYRLMSRRAVEELERFEEVN  184
            +V + R+ R TD  +KR TA+WFYKL   ++   + ++ +D+RLMSR  VE++  + E N
Sbjct  115  MVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  185  LFLRGIVPLLGFRSTTIYYDRKERFAGKTKYPLKKMIAFALDGITSFSITPIRiisligf  244
            LF++GI++ +G ++  + Y R ER AG +K+   K+  +AL+GITSFS  P+R+ + IG+
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  245  vsffvsllfgvyflllkfT-GHTQTGWTSLITSIWFLGGLQLIAFGLIGEYIGKIYKETK  303
                +S+L+G   ++  +  G+   G  SL+ SI FLGG+QLI++G++GEYIG+IY ETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  304  RRPRYIV  310
             RP+YI+
Sbjct  295  SRPKYIL  301

830) RPC_4719 in NC_007925


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  149 bits (549),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 206/304 (68%), Gaps = 5/304 (1%)

Query  20   KTLSLVVPLFNEAAGLPQLHDRLVALAATLRQRYGLGCEVIYVDDGSADATLSVARGLSA  79
              +SLVVP+FNE  ++P +   +  +     + Y +  E+++++DGS DAT S+  +L+ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQEL--KPYEV--EIVFINDGSKDATESIINALAV  56

Query  80   PTLDVQVVSLSRNFGKEAALMAGLDHAGNGAVLFMDGDGQHPPALVEQLVQHWIVDSYDV  139
            +   V  +S++RNFGKE+AL AGLDHA+ +AV+ +D D Q+P  ++ +L++ W  ++ ++
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EM  115

Query  140  VYTAKAHRDNETWLRRTAVRGFYMLINWGARQKIPEDAGDFrllspraaaalrqlperNR  199
            V + +++R  + +L+R +   FY L N  +  KI E+ GDFRL+S      ++ LPERN 
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  200  FFKGLASWIGFRQIRVDYEPEPRSHGITSFNAARLVGLSIEGLTSFSVAPLRIasllgll  259
            F KG+ SW+G +   V+Y    R  GI+ FN+ +L  L++EG+TSFS  PLR+ + +GL+
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLF  235

Query  260  lafvaflfglsILWETMVSGKSVPGYPSLVVGLMTIGGVQLIMIGIVGEYIGKILSELKA  319
            +A ++FL+G  ++ +T+V G++V GYPSL+V+++ +GGVQLI IG++GEYIG+I  E K+
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  320  RPIY  323
            RP Y
Sbjct  296  RPKY  299

831) SUB0703 in NC_012004


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  148 bits (544),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 125/304 (42%), Positives = 203/304 (67%), Gaps = 2/304 (0%)

Query  3    KKLSIVIPCYNEEETIGPFLREMKKVEEQLSSQLIFDYLFINDGSKDKTLKVLREVAVEI  62
             K+S+V+P +NEEE+I  F + ++  +E  + ++  + +FINDGSKD T  ++  +AV  
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  63   PNVHYISFSRNFGKEAALLAGLEESDGDYVTVMDVDLQDPPEILIEMYQKIQEGYDVVGS  122
            P V  +SF+RNFGKE+AL+AGL+++ GD V  +DVDLQDP E++ ++ +K Q G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  123  RRSDRKGEPVIRSFFSKLFYKLINLVSDTEMVDGARDFRLMTRQVVDSILELGEVNRFSK  182
            +RSDR  +  ++   +  FYKL N +S   + +   DFRLM+R+VV++I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  183  GLFSWVGYDVTYISFENRDRVAGETSWNFFSLFKYSLEGFINFSNAPLELATWSGVMafi  242
            G++SWVG +   + +   +RVAG +  N   L + +LEG+ +FS  PL + T  G+    
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  243  vaiigiifiviRKLVVGDPVSGWASTICVilllgglqllalgiigKYIAKIFLETKKRPV  302
            ++++    ++I  LV G+PV G +S +  IL+LGG+QL+++G++G YI++I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  303  YIVK  306
            YI+K
Sbjct  299  YILK  302

832) SLGD_02126 in NC_013893


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  146 bits (539),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 134/310 (44%), Positives = 208/310 (68%), Gaps = 7/310 (2%)

Query  1    MKIRVIVPCYNEGEVVLKTYERLTEIMLKDSNEKNYDYDLLFIDDGSKDSTIQHIQQLSL  60
            MKI ++VP +NE E +   Y  + E+     + K Y+ +++FI+DGSKD+T   I+ L++
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   EDKHVKFISFSRNFGKESAMIAGFHHSVDVDAVIMIDGDLQHPPEFIPNMIDGYLEGYDQ  120
             D  V  +SF+RNFGKE+A++AG++H+ + DAVI ID DLQ+P E IP++I+    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAQR-DREGEQLSRKIVTKMYYKLINAFVEDVQFVDGVGDFRLLSQRAVCAIAELQENN  179
            V+A+R DR  +   ++  +  +YKL N  +   ++ + VGDFRL+S+  V  I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFAWIGYNTKVFSYKNVEREAGQSKWNFRKLFNYGIDGLISFNSKPLRTMIYFGL  239
             F KG+++W+G +T V  Y   ER AG SK N +KL N +++G+ SF++ PLR   Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  fifaisliyiiylsigiivngiSNPGYFTTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ +IS++Y   + I+ +V G +  GY + + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  QRPKYIVQAS  309
             RPKYI++ +
Sbjct  295  SRPKYILKKG  304

833) llh_2610 in NC_017492


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 109/246 (45%), Positives = 172/246 (70%), Gaps = 10/246 (4%)

Query  4    ISFSRNFGKEAALIAGLEVSDGDFVTVMDADLQDPPEMLNEMFTKITEGYDVVGTRRVSR  63
            +SF+RNFGKE+AL+AGL+ + GD V  +D DLQDP E++ +++ K   G ++V ++R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  64   VGEPPIRSFFAKTFYKLINKISDTEMVDGVRDFRLMTRQVVDSILELKENNRFSKGIFSW  123
              +  ++   A  FYKL NKIS   + + V DFRLM+R+VV++I  L E N F KGI+SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  124  VGFKTTYLPYENRERVAGTT---SWNFFGLLKYSIDGIVNFSEAPLNIATFVGFISFLAS  180
            VG +T  + Y   ERVAG +   +W++  L   +++GI +FS  PL + T++G+  F+AS
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL--FVAS  238

Query  181  V--LLSVFYLLKTLFFGDPVQGFPTliflilllgglqllslgiigKYIAKIFLETKKRPN  238
            +  L +   ++ TL FG+PV+G+P+L+  IL+LGG+QL+++G++G YI++I+LETK RP+
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  239  YIIKES  244
            YI+K +
Sbjct  299  YILKKG  304

834) GK2052 in NC_006510


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  145 bits (532),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 103/248 (42%), Positives = 156/248 (63%), Gaps = 12/248 (4%)

Query  26   IDFSRNFGHQIAITAGMDYASGQAVIIIDADLQDPPELILDMIARWKEGYDVVYARRVKR  85
            + F+RNFG + A+ AG+D ASG+AVI ID DLQDP E+I ++I +W+ G ++V A+R  R
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDR  123

Query  86   KGETLFKRWTAYVFYRLLRAATEIDIPADAGDFRLIDRKVCNQLRYMRERNRFVRGLVSW  145
              +  +KR TA  FY+L    +   I  + GDFRL+ R V ++++ + ERN F++G++SW
Sbjct  124  STDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSW  183

Query  146  VGFRHIAVEYEREPRLAGETKYPLKKMIRFSVDGITSFSHKPLKLASWLGFALSAASVVG  205
            VG +   VEY R  R+AG +K+   K+  ++++GITSFS  PL++  W  ++L  AS+  
Sbjct  184  VGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRV--WTYIGLFVASI--  239

Query  206  MMAVLYLKWFTHST------VAGWASLLIVMLFCNGATMTMLGITGEYIGRIYDEVKERP  259
              + LY  W    T      V G +SLL+ +LF  G  +  +G+ GEYIGRIY E K RP
Sbjct  240  --SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

Query  260  LYIINETW  267
             YI++  +
Sbjct  298  KYILKKGR  305

835) SLUG_20980 in NC_017353


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  144 bits (531),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 134/310 (44%), Positives = 208/310 (68%), Gaps = 7/310 (2%)

Query  1    MKIRVIVPCYNEGEVVLKTYERLTEIMLKDSNEKNYDYDLLFIDDGSKDSTIQHIQQLSL  60
            MKI ++VP +NE E +   Y  + E+     + K Y+ +++FI+DGSKD+T   I+ L++
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREF----QELKPYEVEIVFINDGSKDATESIINALAV  56

Query  61   EDKHVKFISFSRNFGKESAMIAGFHHSVDVDAVIMIDGDLQHPPEFIPNMIDGYLEGYDQ  120
             D  V  +SF+RNFGKE+A++AG++H+ + DAVI ID DLQ+P E IP++I+    G + 
Sbjct  57   SDPLVVPLSFTRNFGKEPALFAGLDHASG-DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  121  VIAQR-DREGEQLSRKIVTKMYYKLINAFVEDVQFVDGVGDFRLLSQRAVCAIAELQENN  179
            V+A+R DR  +   ++  +  +YKL N  +   ++ + VGDFRL+S+  V  I  L E N
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNK-ISTPKIEENVGDFRLMSREVVENIKLLPERN  174

Query  180  RFSKGLFAWIGYNTKVFLYKNVEREAGQSKWNFRKLFNYGIDGLISFNSKPLRTMIYFGL  239
             F KG+++W+G +T V  Y   ER AG SK N +KL N +++G+ SF++ PLR   Y+GL
Sbjct  175  LFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGL  234

Query  240  fifaisliyiiylsigiivngiSNPGYFTTIAAilllggiqlisigvvgEYIGRIYYEVK  299
            F+ +IS++Y   + I+ +V G +  GY + + +IL+LGG+QLI+IGV+GEYIGRIY E K
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  300  QRPKYIVQAS  309
             RPKYI++ +
Sbjct  295  SRPKYILKKG  304

836) LCGT_0521 in NC_015930


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  144 bits (531),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 125/311 (41%), Positives = 209/311 (68%), Gaps = 14/311 (4%)

Query  5    TLSIIVPAYNEEETIELFFDEVNTQTVDLPLDKTFYFINDGSSDRTLDVIKMLSLKHPNV  64
             +S++VP +NEEE+I +F+  V       P +  + FINDGS D T  +I+ L++ +P V
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV  61

Query  65   KYISFSRNFGKEaallaglraaSGDFVTVMDADLQDPPSMLKEMYHKIQEGYDIVGTRRI  124
              +SF+RNFGKE+AL+AGL  ASGD V  +D DLQDP  ++ ++ +K Q G ++V ++R 
Sbjct  62   VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS  121

Query  125  SRKDEPFIRSLFARAFYKIMNTISSTQMVDGARDYRLMTRQVVDSILELPEHNRFSKGLF  184
             R  +  ++   A  FYK+ N IS+ ++ +   D+RLM+R+VV++I  LPE+N F KG++
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  185  SWVGYDVFYLEYNNVERVAGKT---SWSFWGLLHYSIDGIINFSDAPLSLATFIGFISFL  241
            SWVG +   +EY   ERVAG +   +W +W L   +++GI +FS  PL + T+IG    L
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIG----L  234

Query  242  ISLCMSLFYA----LKTIIWGEIVQGFPTliililmlgglqllslgiigKYLSKVFLETK  297
            +   +S++Y+    + T++ G+ V+G+P+L++ IL LGG+QL+++G++G Y+++++LETK
Sbjct  235  FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETK  294

Query  298  QRPNYFVKEDN  308
             RP+Y++K + 
Sbjct  295  SRPKYILKKGR  305

837) Bcer98_3950 in NC_009674


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  144 bits (529),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 128/306 (42%), Positives = 204/306 (67%), Gaps = 3/306 (0%)

Query  1    MTLSIIVPCYNEEKVLRAFYSETSLEVHKLDT-DYEFVFVNDGSKDDTLDILRDLANSDS  59
            M +S++VP +NEE  +  FY     E + L   + E+VF+NDGSKD T  I+  LA SD+
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVR-EFQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  60   AVHYISFSRNFGKEAAMLAGLKYATGDAVVIMDADLQHPPALIKDMLEGYNDGYDQVIAK  119
             V  +SF+RNFGKE+A++AGL  A+GDAV+ +D DLQ+P  +I +++E  + G + V+AK
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  120  RT-RTGDSPMRSFISRLYYKVMNTFVDIELVDGIGDFRLLSRRAVDSLLSLSEYNRFSKG  178
            R+ R+ D+ ++   +  +YK+ N +    + + +GDFRL+SR  V+++  L+E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  179  LFSWIGFKELIIEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPlrlsiylgllttll  238
            ++SW+G +  ++EY    R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASI  239

Query  239  ailyvittFIQIMIDGIDVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHF  298
            ++LY    +I+ ++ G  V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  299  IVAEKK  304
            I+   +
Sbjct  300  ILKKGR  305

838) SSU05_1004 in NC_009442


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 106/241 (44%), Positives = 164/241 (69%), Gaps = 2/241 (0%)

Query  25   LSFSRNFGKeaalyaglqaaqgeLVTVMDVDLQDPPEMLMEMKAMLDGNPDLDCVGTRRV  84
            LSF+RNFGKE+AL+AGL+ A G+ V  +DVDLQDP E++ ++    ++ +++  V ++R 
Sbjct  64   LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEM--VLAKRS  121

Query  85   SRDGEPPIRSFLAKLFYKLMNKISQVEVVDGARDFRLMRRHMVDAILSVSEYNRFSKGIF  144
             R  +  ++   A  FYKL NKIS   + +   DFRLM R++V+ I  ++E N F KGI+
Sbjct  122  DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL  181

Query  145  AWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEGIINFSDTPLNIASYTGfftfllsl  204
            +WVG +T+ + Y   ERVAG +  + WKL + ++EGI +FS  PL + +Y G+F   +S+
Sbjct  182  SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF  241

Query  205  vlmvfvvfKTLVFGDPTIGWPSTICIILFLGGLQLMTIGILGKYLAKVFLETKKRPIYIV  264
            +    +++ TLVFG+P  G PS +  ILFLGG+QL+ IG+LG Y+++++LETK RP YI+
Sbjct  242  LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301

Query  265  K  265
            K
Sbjct  302  K  302

839) Csac_0268 in NC_009437


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  141 bits (518),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 125/309 (41%), Positives = 204/309 (67%), Gaps = 11/309 (3%)

Query  3    LRVYFVIPCFNEEEMLPFTIQKMGEKLQSLIEKELISDKSKVVFVDDGSRDRTWDLIKA-  61
            +++ +V+P FNEEE +P  + K    +Q L   E+      +VF++DGS+D T  +I+A 
Sbjct  1    MKISLVVPVFNEEEAIP-VFYKTVREFQELKPYEV-----EIVFINDGSKDATESIINAL  54

Query  62   AAEDKRFLGVKLSRNCGHQNALMAGMSYAVKFADCIITLDADLQDDINVIDEFIQKYKEG  121
            A  D   + + ++RN G + AL AG+  A   +D +I +D DLQD I+VI ++I+K + G
Sbjct  55   AVSDPLVVPLSFTRNFGKEPALFAGLDHAS--GDAVIPIDVDLQDPIEVIPHLIEKWQAG  112

Query  122  YEIVYGVRSSRKTDTFFKRFTAEGFYKLMKAFGVEIVFNH-ADYRLMSKRAVQYLLQFEE  180
             E+V + RS R TD  +KR TAE FYKL + ++   + ++ +D+RLMS+  V+ +  + E
Sbjct  113  AEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPE  172

Query  181  RNLFLRGMIPLIGLKSTVVYYERLERVAGKTKYPLKKMLSFAFEGITSFSVKPIKYITTA  240
            RNLF++G+++ +G ++ VV Y R ERVAG +K+   K+ ++A+EGITSFS  P++  T  
Sbjct  173  RNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYI  232

Query  241  GflmfllsfliliYAIVQKLR-GQAVTGWTSLTISIWFIGGLQLVALGLIGEYIGKIYKE  299
            G+++  +SFL     I++ L  G++V G  SL +SI F+GG+QL+++G++GEYIG+IY E
Sbjct  233  GLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLE  292

Query  300  VKRRPLYFI  308
             K RP Y++
Sbjct  293  TKSRPKYIL  301

840) Desal_3671 in NC_012881


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  140 bits (516),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 206/303 (68%), Gaps = 3/303 (0%)

Query  11   KKISVVVPVLNEEQNVPLICGRITE--VLNNFNFEIIFVDDGSTDGTLEQLMSLSAKHAN  68
             KIS+VVPV+NEE+ +P++   + E   L+ ++ EI+F++DGS D+T   + +L+  ++ 
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  69   INFISLSRNWGHQCALKAGLDHATGDCVISIDGDLQHPPELMLTFIDKWAQGADIVHSVR  128
            +  +S++RN G + AL AGLDHA+GD VI+ID DLQ+P E++  +I+KW  GA++V + R
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR  120

Query  129  KEDPNLPFLKKFTSSTFYkiinkisnlnikPGTADFRLLDRKVVEACRNLNEDVYFWRGI  188
             + +    LK+ T+  FYK+ NKIS  +I    +DFRL+ R VVE  + L E   F +GI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  189  IPWLGFTQEYIEYEPNSRQYGKSKYNLKKMLGLAINGVASFSLIPLRaasligsgillia  248
            ++W+G   + +EY    R  G SK+N  K+  LA++G++SFS +PLR  + IG  +  I+
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  249  lvylayiiiQFLI-GNTVPGWSSimaaililgaiqliFLGTIGEYVGKTYLGSKKRPTYF  307
            ++Y A +II+ L+ GN V G +S++ +IL+LG++QLI +G +GEY+G+ YL +K RP Y+
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYI  300

Query  308  IKK  310
            +KK
Sbjct  301  LKK  303

841) LBFF_1538 in NC_021235


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  137 bits (505),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 100/243 (42%), Positives = 155/243 (64%), Gaps = 5/243 (2%)

Query  3    KLSIVVPCYNEQEALPLFYPAVEEVVQKISNLEIEYWLVDDGSADQTLEEMRKLHAMDPE  62
            K+S+VVP +NE+EA+P+FY +V E  Q +   E+E  +++DGS D T   +  L   DP 
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREF-QELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  63   RVHYLTFSRNFGKESALYAGLEAATGDYVVVMDADLQDPPSFLPKMYSIIQTGEYDCVGT  122
             V  L+F+RNFGKE+AL+AGL+ A+GD V+ +D DLQDP   +P +    Q+G  + V +
Sbjct  61   VVP-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLA  118

Query  123  RRIDRTGETKFKSFLSNQFYSVINRVSQNNIVPGARDYRMMTRQMVDAVLSMKEYSRFSK  182
            +R DR+ + ++K   ++ FY + N++S  +I     D+R+M+R++V+ +  + E + F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  183  GIFSWVGFKTKYLEYKNVERVAGTTDWSTWKLFKYAMNGIADFSQAPLSLAVWLGTTSFV  242
            GI+SWVG +T  +EY   ERVAG +  + WKL + A++GI+ FS  PL   VW     FV
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFV  236

Query  243  LSI  245
             SI
Sbjct  237  ASI  239

842) ybaI in NC_020450


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 132/305 (44%), Positives = 207/305 (68%), Gaps = 6/305 (1%)

Query  4    LAIVVPVYNEEETIELFIKEVNDKTEKLELKKVFYFVNDGSSDHTLPLIKKLASQVDNIN  63
            +++VVPV+NEEE+I +F K V +  E       + F+NDGS D T ++I+ LA     + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   YISFSRNFGKeaallagleatteplVTVMDVDLQDPPELIVSMYQKLQEGYDSVGARRIS  123
             +SF+RNFGKE+AL+AGL+ ++   V  +DVDLQDP E+I  + +K Q G + V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  RSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLMTRQVVDSILTLRENNRFSKGLFS  183
            RS ++ L    +  FYK+ NK+ST  I +   DFRLM+R+VV++I  L E N F KG++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  184  WVGYDVTYLEYENHERSAGQT---SWSFSQLLRYSIDGIINFSEMPLNIATfvgffsfla  240
            WVG +   +EY   ER AG +   +W + +L   +++GI +FS  PL + T++G+F    
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVASI  239

Query  241  slllsifyllktlIFGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKKRPNY  300
            S+L +   ++ TL+FG+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK RP+Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  301  IIKES  305
            I+K +
Sbjct  300  ILKKG  304

843) Ssal_00592 in NC_017594


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 123/304 (41%), Positives = 196/304 (65%), Gaps = 2/304 (0%)

Query  2    KTLAIVVPCYNEEETIHPFLEACQAVERQMANQLAFNYYFVNDGSKDRTLEVLRQVSKQF  61
              +++VVP +NEEE+I  F  + +  +   + ++ +   F+NDGSKD T  ++  ++   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIV--FINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKEAGLLAGLEATQGDYVTVMDADLQDPPELLIEMYAKIQEGYDVVGT  121
              V  LSF+RNFGKE++L+AGL+ + GD V  +D DLQDP E++ ++  K Q G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPPIRSLFAKAFYWLINKVSDTEMVDGARDFRLMTRQVVDAILELKEVNRFSK  181
            +R+DR  +  ++   A  FY L NK+S   + +   DFRLM+R+VV+ I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVAYVSYENRERVAGETswsfwsllsyslDGFINFSEVPLKLATWAGTFSFL  241
            G++SWVG +   V Y   ERVAG +  + W L + +L+G+ +FS  PL++ T  G F   
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  ISLVGIIFVIIRKLTIGGSVAGWASLVSiilfiggiqllalgiigHYISKIFLETKKRPV  301
            IS++    +II  L +G +V G +SL+  ILF+GG+QL+++G++G+YI++I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YIVK  305
            YI+K
Sbjct  299  YILK  302

844) LCRIS_00804 in NC_014106


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  134 bits (493),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 96/232 (42%), Positives = 149/232 (65%), Gaps = 4/232 (1%)

Query  3    KLSIVVPCFNEQETIPLFYPAVQKVLAKIPKVTPEYWFVDDGSNDNTLTELKKLHEQDKH  62
            K+S+VVP FNE+E+IP+FY +V+  +  +     E  F++DGS+D T + ++ L   D  
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDPL  60

Query  63   VHYISFSRNFGKESAIYAGLSAATGDYIVLMDVDLQDPPSLLPKMYKILQTGEYDAVGCR  122
            V  +SF+RNFGKE+A++AGL  A+GD ++ +DVDLQDP  ++P +    Q+G  + V  +
Sbjct  61   VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAK  119

Query  123  RVDRKGEGKFKSFLSNQFYKVINRISKVEIVSGVRDYRMMTRQMVNAVLSMKEYSRFSKG  182
            R DR  +G++K   ++ FYK+ N+IS   I   V D+R+M+R++V+ +  + E + F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFAWVGFKTKYLEYHNVERVAGETDWTTHKLFKYALGGIADFSQAPLNLAVW  234
            I++WVG +T  +EY   ERVAG +     KL + AL GI+ FS  PL   VW
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VW  229

845) csbB in NC_015760


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  134 bits (492),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 122/304 (41%), Positives = 196/304 (65%), Gaps = 2/304 (0%)

Query  2    KTLAIVVPCYNEEETIHPFLEACQAVERQMANQLAFNYYFVNDGSKDRTLEVLRQVSKQF  61
              +++VVP +NEEE+I  F  + +  +   + ++ +   F+NDGSKD T  ++  ++   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIV--FINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKEAGLLAGLEATQGDYVTVMDADLQDPPELLIEMYAKIKEGYDVVGT  121
              V  LSF+RNFGKE++L+AGL+ + GD V  +D DLQDP E++ ++  K + G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPPIRSLFAKAFYWLINKVSDTEMVDGARDFRLMTRQVVDAILELKEVNRFSK  181
            +R+DR  +  ++   A  FY L NK+S   + +   DFRLM+R+VV+ I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVAYVSYENRERVAGETswsfwsllsyslDGFINFSEVPLKLATWAGTFSFL  241
            G++SWVG +   V Y   ERVAG +  + W L + +L+G+ +FS  PL++ T  G F   
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  ISLVGIIFVIIRKLTIGGSVAGWASLVSiilfiggiqllalgiigHYISKIFLETKKRPV  301
            IS++    +II  L +G +V G +SL+  ILF+GG+QL+++G++G+YI++I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YIVK  305
            YI+K
Sbjct  299  YILK  302

846) ybaI in NC_017486


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  133 bits (489),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 129/305 (43%), Positives = 207/305 (68%), Gaps = 6/305 (1%)

Query  4    LAIVVPVYNEEETLELFIKEVNDKTEKLELKKVFYFVNDGSSDQTLPLIKKLASQVDNIN  63
            +++VVPV+NEEE++ +F K V +  E       + F+NDGS D T ++I+ LA     + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   YISFSRNFGKeaallagleatteplVTVMDVDLQDPPELLVSMYQKLQEGYDSVGARRIS  123
             +SF+RNFGKE+AL+AGL+ ++   V  +DVDLQDP E++  + +K Q G + V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  RSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLMTRQVVDSILTLRENNRFSKGLFS  183
            RS ++ L    +  FYK+ NK+ST  I +   DFRLM+R+VV++I  L E N F KG++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  184  WVGYDVTYLEYENHERSAGQT---SWSFSQLLRYSIDGIINFSEMPLNIATfvgffsfla  240
            WVG +   +EY   ER AG +   +W + +L   +++GI +FS  PL + T++G+F    
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVASI  239

Query  241  slllsifyllktlIYGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKKRPNY  300
            S+L +   ++ TL++G+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK RP+Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  301  IIKES  305
            I+K +
Sbjct  300  ILKKG  304

847) ybaI in NC_002662


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  133 bits (489),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 129/305 (43%), Positives = 207/305 (68%), Gaps = 6/305 (1%)

Query  4    LAIVVPVYNEEETLELFIKEVNDKTEKLELKKVFYFVNDGSSDQTLPLIKKLASQVDNIN  63
            +++VVPV+NEEE++ +F K V +  E       + F+NDGS D T ++I+ LA     + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   YISFSRNFGKeaallagleatteplVTVMDVDLQDPPELLVSMYQKLQEGYDSVGARRIS  123
             +SF+RNFGKE+AL+AGL+ ++   V  +DVDLQDP E++  + +K Q G + V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  RSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLMTRQVVDSILTLRENNRFSKGLFS  183
            RS ++ L    +  FYK+ NK+ST  I +   DFRLM+R+VV++I  L E N F KG++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  184  WVGYDVTYLEYENHERSAGQT---SWSFSQLLRYSIDGIINFSEMPLNIATfvgffsfla  240
            WVG +   +EY   ER AG +   +W + +L   +++GI +FS  PL + T++G+F    
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVASI  239

Query  241  slllsifyllktlIYGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKKRPNY  300
            S+L +   ++ TL++G+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK RP+Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  301  IIKES  305
            I+K +
Sbjct  300  ILKKG  304

848) ybaI in NC_013656


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 129/305 (43%), Positives = 206/305 (68%), Gaps = 6/305 (1%)

Query  4    LAIVVPVYNEEETIELFIKEVNDKTEKLELKKVFYFVNDGSSDQTLPLIKKLASQVDNIN  63
            +++VVPV+NEEE+I +F K V +  E       + F+NDGS D T ++I+ LA     + 
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  64   YISFSRNFGKeaallagleatteplVTVMDVDLQDPPVLLVSMYQKLQEGYDSVGARRIS  123
             +SF+RNFGKE+AL+AGL+ ++   V  +DVDLQDP  ++  + +K Q G + V A+R  
Sbjct  63   PLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSD  122

Query  124  RSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLMTRQVVDSILTLRENNRFSKGLFS  183
            RS ++ L    +  FYK+ NK+ST  I +   DFRLM+R+VV++I  L E N F KG++S
Sbjct  123  RSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILS  182

Query  184  WVGYDVTYLEYENHERSAGQT---SWSFSQLLRYSIDGIINFSEMPLNIATfvgffsfla  240
            WVG +   +EY   ER AG +   +W + +L   +++GI +FS  PL + T++G+F    
Sbjct  183  WVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLFVASI  239

Query  241  slllsifyllktlIYGDPVQGFPTlivlilllgglqllslgiigKYIAKIFLETKKRPNY  300
            S+L +   ++ TL++G+PV+G+P+L+V IL+LGG+QL+++G++G YI++I+LETK RP+Y
Sbjct  240  SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

Query  301  IIKES  305
            I+K +
Sbjct  300  ILKKG  304

849) EHR_10040 in NC_018081


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 116/271 (43%), Positives = 184/271 (68%), Gaps = 1/271 (0%)

Query  1    MFIDDGSRDNTLQAIKALANDHEYVRFISFSRNFGKEAALYAGLQASTGDLVSVMDVdlq  60
            +FI+DGS+D T   I+ALA  +  V  +SF+RNFGKE+AL+AGL+ ++GD V  +DVDLQ
Sbjct  37   VFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQ  96

Query  61   dppdllpEMIETIMQSDIDCVGTRRSTRDGEPPIRSFFAKKFYQLINKISDTEMVDGARD  120
            DP +++P++IE   Q++ + V ++RS R  +  ++   A  FY+L NKIS   + +   D
Sbjct  97   DPIEVIPHLIEK-WQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGD  155

Query  121  FRLMTRQMVDAILELTEYNRFSKGLFSWVGFKTKYISFENRERVAGETSWSFWKLFNYSI  180
            FRLM+R++V+ I  L E N F KG++SWVG +T  + +   ERVAG +  + WKL N ++
Sbjct  156  FRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLAL  215

Query  181  DGIVNFSDAPLTIASFVGALSCIGSGlailfiilrallYGDPTAGWPSMVSiflfiggiq  240
            +GI +FS  PL + +++G +    S L    +I+ +L++G+P  G PS++  +LF+GG+Q
Sbjct  216  EGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQ  275

Query  241  llclgiigKYIGKIFLETKQRPVYIIRETEK  271
            L+ +G++G YIG+I+LETK RP YI++   K
Sbjct  276  LIGIGVLGEYIGRIYLETKSRPKYILKKGRK  306

850) csbB in NC_017595


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  130 bits (477),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 196/304 (65%), Gaps = 2/304 (0%)

Query  2    KTLAIVVPCYNEEETIHPFLEACQAVERQMANQLTFNYYFVNDGSKDRTLEVLRQVSKQF  61
              +++VVP +NEEE+I  F  + +  +   + ++ +   F+NDGSKD T  ++  ++   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIV--FINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKeagllagleaaegDYVTVMDADLQDPPELLIEMYAKIQEGYDVVGT  121
              V  LSF+RNFGKE++L+AGL+ A GD V  +D DLQDP E++ ++  K Q G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPPIRSLFAKAFYWLINKVSDTEMVDGARDFRLMTRQVVDAILELKEVNRFSK  181
            +R+DR  +  ++   A  FY L NK+S   + +   DFRLM+R+VV+ I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVAYVSYENRERVAGETSWSFWSLLNYSLDGFINFSEVPLKLATWAGTFSFL  241
            G++SWVG +   V Y   ERVAG +  + W L N +L+G+ +FS  PL++ T  G F   
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVAS  238

Query  242  ISLVGIVFVVIRKLTIGGSVAGWASLVSiilfiggiqllalgiigHYISKIFLETKKRPV  301
            IS++    ++I  L +G +V G +SL+  ILF+GG+QL+++G++G+YI++I+LETK RP 
Sbjct  239  ISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPK  298

Query  302  YIVK  305
            YI+K
Sbjct  299  YILK  302

851) SGGB_1365 in NC_017576


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 126/306 (42%), Positives = 203/306 (67%), Gaps = 8/306 (2%)

Query  3    KLSIIVPCYNEQETIYPFLEETQKVEQKLKNHLVFDYIFVNDGSKDETLNVLRDVASRFP  62
            K+S++VP +NE+E+I  F    +  ++ LK   V + +F+NDGSKD T +++  +A   P
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQE-LKPYEV-EIVFINDGSKDATESIINALAVSDP  59

Query  63   NVHYLSFSRNFgkeagllagleaadgdlITVMDADLQDPPELLINMYQKILEGYDVVGTR  122
             V  LSF+RNFGKE++L+AGL+ A GD +  +D DLQDP E++ ++ +K   G ++V ++
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  123  RADRKGEPVIRSFFSKMFYKIINAVSDTEMVDGARDFRLMTRQVVDSILELGEVNRFSKG  182
            R+DR  +  ++   +  FYK+ N +S   + +   DFRLM+R+VV++I  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFSWVGYDVTYIAYENRERVAGETSWNFWSLLKYSMEGFINFSEAPLNLSLWAGAVSFLA  242
            I+SWVG +   + Y   ERVAG +  N W L + ++EG+ +FS  PL   +W+    F+A
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFVA  237

Query  243  SILGILF---IIVRKLTIGGSVTGWASLVCiilfiggiqllalgiigKYISKIFLETKKR  299
            SI ++L+   +I+  L +G +V G +SL+  ILF+GG+QL+++G++G YI++I+LETK R
Sbjct  238  SI-SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PVYIVK  305
            P YI+K
Sbjct  297  PKYILK  302

852) SGGBAA2069_c13610 in NC_015215


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 126/306 (42%), Positives = 203/306 (67%), Gaps = 8/306 (2%)

Query  3    KLSIIVPCYNEQETIYPFLEETQKVEQKLKNHLVFDYIFVNDGSKDETLNVLRDVASRFP  62
            K+S++VP +NE+E+I  F    +  ++ LK   V + +F+NDGSKD T +++  +A   P
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQE-LKPYEV-EIVFINDGSKDATESIINALAVSDP  59

Query  63   NVHYLSFSRNFgkeagllagleaadgdlITVMDADLQDPPELLINMYQKILEGYDVVGTR  122
             V  LSF+RNFGKE++L+AGL+ A GD +  +D DLQDP E++ ++ +K   G ++V ++
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  123  RADRKGEPVIRSFFSKMFYKIINAVSDTEMVDGARDFRLMTRQVVDSILELGEVNRFSKG  182
            R+DR  +  ++   +  FYK+ N +S   + +   DFRLM+R+VV++I  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFSWVGYDVTYIAYENRERVAGETSWNFWSLLKYSMEGFINFSEAPLNLSLWAGAVSFLA  242
            I+SWVG +   + Y   ERVAG +  N W L + ++EG+ +FS  PL   +W+    F+A
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFVA  237

Query  243  SILGILF---IIVRKLTIGGSVTGWASLVCiilfiggiqllalgiigKYISKIFLETKKR  299
            SI ++L+   +I+  L +G +V G +SL+  ILF+GG+QL+++G++G YI++I+LETK R
Sbjct  238  SI-SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PVYIVK  305
            P YI+K
Sbjct  297  PKYILK  302

853) GALLO_1371 in NC_013798


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 126/306 (42%), Positives = 203/306 (67%), Gaps = 8/306 (2%)

Query  3    KLSIIVPCYNEQETIYPFLEETQKVEQKLKNHLVFDYIFVNDGSKDETLNVLRDVASRFP  62
            K+S++VP +NE+E+I  F    +  ++ LK   V + +F+NDGSKD T +++  +A   P
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQE-LKPYEV-EIVFINDGSKDATESIINALAVSDP  59

Query  63   NVHYLSFSRNFgkeagllagleaadgdlITVMDADLQDPPELLINMYQKILEGYDVVGTR  122
             V  LSF+RNFGKE++L+AGL+ A GD +  +D DLQDP E++ ++ +K   G ++V ++
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  123  RADRKGEPVIRSFFSKMFYKIINAVSDTEMVDGARDFRLMTRQVVDSILELGEVNRFSKG  182
            R+DR  +  ++   +  FYK+ N +S   + +   DFRLM+R+VV++I  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFSWVGYDVTYIAYENRERVAGETSWNFWSLLKYSMEGFINFSEAPLNLSLWAGAVSFLA  242
            I+SWVG +   + Y   ERVAG +  N W L + ++EG+ +FS  PL   +W+    F+A
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFVA  237

Query  243  SILGILF---IIVRKLTIGGSVTGWASLVCiilfiggiqllalgiigKYISKIFLETKKR  299
            SI ++L+   +I+  L +G +V G +SL+  ILF+GG+QL+++G++G YI++I+LETK R
Sbjct  238  SI-SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PVYIVK  305
            P YI+K
Sbjct  297  PKYILK  302

854) SGPB_1292 in NC_015600


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 127/306 (42%), Positives = 203/306 (67%), Gaps = 8/306 (2%)

Query  3    KLSIVVPCYNEQETIYPFLEETQKVEQKLKNHLVFDYIFVNDGSKDETLNVLRDVASRFP  62
            K+S+VVP +NE+E+I  F    +  ++ LK   V + +F+NDGSKD T +++  +A   P
Sbjct  2    KISLVVPVFNEEEAIPVFYKTVREFQE-LKPYEV-EIVFINDGSKDATESIINALAVSDP  59

Query  63   NVHYLSFSRNFgkeagllagleaadgdlITVMDADLQDPPELLINMYQKILEGYDVVGTR  122
             V  LSF+RNFGKE++L+AGL+ A GD +  +D DLQDP E++ ++ +K   G ++V ++
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  123  RADRKGEPVIRSFFSKMFYKIINAVSDTEMVDGARDFRLMTRQVVDSILELGEVNRFSKG  182
            R+DR  +  ++   +  FYK+ N +S   + +   DFRLM+R+VV++I  L E N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  183  IFSWVGYNVTYIAYENRERVAGETSWNFWSLLKYSMEGFINFSEAPLNLSLWAGAVSFLA  242
            I+SWVG +   + Y   ERVAG +  N W L + ++EG+ +FS  PL   +W+    F+A
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR--VWTYIGLFVA  237

Query  243  SILGILF---IIVRKLTIGGSVTGWASLVCiilfiggiqllalgiigKYISKIFLETKKR  299
            SI ++L+   +I+  L +G +V G +SL+  ILF+GG+QL+++G++G YI++I+LETK R
Sbjct  238  SI-SFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PVYIVK  305
            P YI+K
Sbjct  297  PKYILK  302

855) TEH_16060 in NC_016052


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  127 bits (464),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 122/297 (42%), Positives = 194/297 (66%), Gaps = 2/297 (0%)

Query  2    LSIVVPCFNEQESLPYFVKEVEKVASIITHSVEYVFVNDGSQDDTLQSLRQLYKNMPDRV  61
            +S+VVP FNE+E++P F K V     +    VE VF+NDGS+D T   +  L  + P  V
Sbjct  3    ISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLVV  62

Query  62   RYVSFSKNFGKESALYAGLHASRGDLVTVMDAdlqdppdllpqMIERIETSDIDCVGTRR  121
              +SF++NFGKE+AL+AGL+ + GD V  +D DLQDP +++P++IE+ +++  + V ++R
Sbjct  63   P-LSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA-EMVLAKR  120

Query  122  QDREGEPVVRSFFARLFYKLVNKFGDTEMIDGARDFRLMTRQMVDAILSMTEYNRFSKGI  181
             DR  +  ++   A  FYKL NK++   + +   DFRLM+R++V+ I  + E N F KGI
Sbjct  121  SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI  180

Query  182  FSWVGFNTEYISYENRERVAGTTSWSFWSLFKYSIDGIVNFSDAPltlaallgglSCiaa  241
            +SWVG +T+ + Y   ERVAG +  + W L + +++GI +FS  PL + + +G +    +
Sbjct  181  LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS  240

Query  242  vialifivirallfGDPTTGWPSLASIVlfmgglqllflgVIGKYIGKIFLETKKRP  298
             +    ++I +L+FG+P  G PSL   +LF+GG+QL+ +GV+G YIG+I+LETK RP
Sbjct  241  FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRP  297

856) Micau_1952 in NC_014391


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  122 bits (445),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 125/310 (41%), Positives = 202/310 (66%), Gaps = 8/310 (2%)

Query  12   VRLSVVVPCFNEEASVERLHEMLSAALAELTdvdvevvyvddgsedgTlaalrrlaaaDP  71
            +++S+VVP FNEE ++  +   +   + EL   +VE+V+++DGS D+T + +  LA +DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  72   AVCYTSLSRNFGKEAAMLAGLRRATGDAVVIMDADLQHPPRLLPEMVMLYRQGFDQVIAr  131
             V   S++RNFGKE+A++AGL +A+GDAV+ +D DLQ+P  ++P+++   + G + V+A+
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  132  rdrrgdrfirMVASRS-FYRLVNWWIDVRLLDGAGDFRLLSRLAVNAILAMPEYNRFSKG  190
            R  R+        +   FY+L N     ++ +  GDFRL+SR  V+ I  +PE N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  191  LFSWIGFRTAVVAHRNETRQAGQSR---WTFGKLFNYAFDGLLSFNNRPLRLAIYGGLFL  247
            ++SW+G +T VV      R AG S+   W   KL N A++G+ SF+  PLR+  Y GLF+
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGW---KLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  248  TLIAVGYMAWVVADAVEKGIDVPGYTTIIVSviglggiqmmilgvigEYIGRIYYETKRR  307
            + I+  Y AW++ D++  G  V GY +++VS++ LGG+Q++ +GV+GEYIGRIY ETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  308  PHYLVQETER  317
            P Y+++   +
Sbjct  297  PKYILKKGRK  306

857) ML5_2059 in NC_014815


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  122 bits (445),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 125/310 (41%), Positives = 202/310 (66%), Gaps = 8/310 (2%)

Query  12   VRLSVVVPCFNEEASVERLHEMLSAALAELTdvdvevvyvddgsedgTlaalrrlaaaDP  71
            +++S+VVP FNEE ++  +   +   + EL   +VE+V+++DGS D+T + +  LA +DP
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVRE-FQELKPYEVEIVFINDGSKDATESIINALAVSDP  59

Query  72   AVCYTSLSRNFGKEAAMLAGLRRATGDAVVIMDADLQHPPRLLPEMVMLYRQGFDQVIAr  131
             V   S++RNFGKE+A++AGL +A+GDAV+ +D DLQ+P  ++P+++   + G + V+A+
Sbjct  60   LVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAK  119

Query  132  rdrrgdrfirMVASRS-FYRLVNWWIDVRLLDGAGDFRLLSRLAVNAILAMPEYNRFSKG  190
            R  R+        +   FY+L N     ++ +  GDFRL+SR  V+ I  +PE N F KG
Sbjct  120  RSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKG  179

Query  191  LFSWIGFRTAVVAHRNETRQAGQSR---WTFGKLFNYAFDGLLSFNNRPLRLAIYGGLFL  247
            ++SW+G +T VV      R AG S+   W   KL N A++G+ SF+  PLR+  Y GLF+
Sbjct  180  ILSWVGGQTDVVEYVRAERVAGISKFNGW---KLWNLALEGITSFSTFPLRVWTYIGLFV  236

Query  248  TLIAVGYMAWVVADAVEKGIDVPGYTTIIVSviglggiqmmilgvigEYIGRIYYETKRR  307
            + I+  Y AW++ D++  G  V GY +++VS++ LGG+Q++ +GV+GEYIGRIY ETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  308  PHYLVQETER  317
            P Y+++   +
Sbjct  297  PKYILKKGRK  306

858) RO1_20700 in NC_021012


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  120 bits (437),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 111/267 (42%), Positives = 178/267 (67%), Gaps = 4/267 (1%)

Query  46   FVNDGSKDRTWEIIEGLARENPHFIGICQSRNRGHQNAVLAGLMEAKDVSDITISIDCDG  105
            F+NDGSKD T  II++LA  +P  + +  +RN G + A++AGL +A   +D  I+ID D 
Sbjct  38   FINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHAS--GDAVIPIDVDL  95

Query  106  QDDIATMEAMVDAYYDGAEVVYGVRSSRDTDTFFKRFTAQAFYKVLMRMGVETVYNH-AD  164
            QD I  +  +++    GAE+V + RS R TD  +KR TA+ FYK+  +++   + ++ +D
Sbjct  96   QDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGD  155

Query  165  YRLISARVLKEFAGFKEVNLFLRGMIPLVGFKSTSVFYERHERIAGESHYPLAKMVNLAI  224
            +RL+S  V+ ++  + E NLF++G+++ VG ++  V Y R ER+AG S +   K+ NLA+
Sbjct  156  FRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLAL  215

Query  225  DGITSLSVKPLRLISGLGIGVSVLSFVGVLWAVI-TQICGRTVTGWASTVCVICFMggvq  283
            +GITS+S  PLR+ + +G+ V+ +SF+   W +I T + G  V G +S +  I F+GGVQ
Sbjct  216  EGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQ  275

Query  284  lvclgvlgEYIGKIYMEVKARPRYIIS  310
            L+ +GVLGEYIG+IY+E K+RP+YI+ 
Sbjct  276  LIGIGVLGEYIGRIYLETKSRPKYILK  302

859) Clopa_3035 in NC_021182


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  120 bits (440),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 126/310 (41%), Positives = 202/310 (66%), Gaps = 16/310 (5%)

Query  8    LVIPCYNEESVLR---ETAKQLNKKMKAMILKNYISQNSKIMFVNDGSKDSTWNIIEDLN  64
            LV+P +NEE  +     T ++++       LK Y   +  I+F+NDGSKD+T +II+ L 
Sbjct  5    LVVPVFNEEEAIPVFYKTVREFQE------LKPY---EVEIVFINDGSKDATESIINALA  55

Query  65   ISDPIFIGLKLSRNEGHQNALLAGLMGSKKYADMVISLDADLQDDINVIENFVEEYYAGN  124
            +SDP+ + L ++RN G + AL+AGL      +D VI++D DLQD I+VI +++E   AG 
Sbjct  56   VSDPLVVPLSFTRNFGKEPALFAGL--DHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGA  113

Query  125  DIVYGVRSKREKDTFFKRFTAESFYKFMKALGVDIVFNH-ADYRLMSKRALEALEQFKEV  183
            ++V + RS R  D  +KR TAE FYK+ + ++   + ++ +D+RLMS+  +E +  + E 
Sbjct  114  EMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPER  173

Query  184  NLFLRGIVPLIGFKSSIVVYERNERFAGESKYPLKKMLCFAFDGITSFSVKPiriitaig  243
            NLF++GI++ +G ++ +V Y R ER AG SK+   K+  +A++GITSFS  P+R+ T IG
Sbjct  174  NLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIG  233

Query  244  giifiistlffiysliMKFL-GRTVVGWTSIVCSIWMiggiqllclgiigEYIGKIYSEV  302
             ++  IS L+    +I  ++ G  V G  S++ SI  +GG+QL+ +G++GEYIG+IY E 
Sbjct  234  LFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLET  293

Query  303  KARPKYIIEK  312
            K+RPKYI+ K
Sbjct  294  KSRPKYILKK  303

860) BLLJ_1809 in NC_015067


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  120 bits (440),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 110/271 (41%), Positives = 182/271 (68%), Gaps = 12/271 (4%)

Query  71   ILFVDDGSKDDTWSIIRNLHERDAHLFGGVKLSHNRGHQNALLAGLMTARAYGCDAAISM  130
            I+F++DGSKD T SII  L   D+ L   + +++N G + AL+AGL  A +   DA I++
Sbjct  36   IVFINDGSKDATESIINALAVSDP-LVVPLSFTRNFGKEPALFAGLDHASG---DAVIPI  91

Query  131  DADLQDDVNAVDEFIDGFCNGNEIVYGVRSARKKDTWFKRTTAEAFYKVFEWMGAETVPD  190
            D DLQD ++ + ++I+    G E+V + RS R  D ++KR TAE FYK+ + +++  + +
Sbjct  92   DVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEE  151

Query  191  H-ADYRLMSRETLDALSEYHEVNLFLRGIVPTLGYQTSKVYYERGEREAGESKYPLKKMI  249
            + +D+RLMSRE ++ +    E NLF++GI++ +G QT  V Y R+ER AG SK+   K+ 
Sbjct  152  NVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLW  211

Query  250  AFAIQGITSFSTKPLSFVTGAGLLSILVAIGMFVY----VLVSLGFGHAIAGWGSmmisi  305
             +A++GITSFST PL   T  GL   +VA   F+Y    ++ +L FG+++ G  S+++SI
Sbjct  212  NLALEGITSFSTFPLRVWTYIGL---FVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSI  268

Query  306  wligglimlslgiVGEYVGKIYMESKHRPRY  336
             ++GG+ ++++G++GEY+G+IY+E+K RP+Y
Sbjct  269  LFLGGVQLIGIGVLGEYIGRIYLETKSRPKY  299

861) ROI_08020 in NC_021040


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  119 bits (435),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 111/267 (42%), Positives = 177/267 (67%), Gaps = 4/267 (1%)

Query  46   FVNDGSKDRTWEIIEELARENPHFIGICQSRNRGHQNAVLAGLMEAKDVSDITISIDCDG  105
            F+NDGSKD T  II+ LA  +P  + +  +RN G + A++AGL +A   +D  I+ID D 
Sbjct  38   FINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHAS--GDAVIPIDVDL  95

Query  106  QDDIATMEAMVDAYYDGAEVVYGVRSSRDTDTFFKRFTAQAFYKVLMRMGVETVYNH-AD  164
            QD I  +  +++    GAE+V + RS R TD  +KR TA+ FYK+  +++   + ++ +D
Sbjct  96   QDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGD  155

Query  165  YRLISARVLKEFAGFKEVNLFLRGMIPLVGFKSTSVFYERHERIAGESHYPLAKMVNLAI  224
            +RL+S  V+ ++  + E NLF++G+++ VG ++  V Y R ER+AG S +   K+ NLA+
Sbjct  156  FRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLAL  215

Query  225  DGITSLSVKPLRLISGLGIGVSVLSFVGVLWAVI-TQICGRTVTGWASTVCVICFMggvq  283
            +GITS+S  PLR+ + +G+ V+ +SF+   W +I T + G  V G +S +  I F+GGVQ
Sbjct  216  EGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQ  275

Query  284  lvclgvlgEYIGKIYMEVKARPRYIIS  310
            L+ +GVLGEYIG+IY+E K+RP+YI+ 
Sbjct  276  LIGIGVLGEYIGRIYLETKSRPKYILK  302

862) csbB in NC_016749


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  118 bits (429),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 125/306 (41%), Positives = 200/306 (66%), Gaps = 6/306 (1%)

Query  2    KKLSIVVPCYNEQETIYPFLEETQKVEQKLKNHLVFDYIFVNDGSKDETLNVLRDVASRF  61
             K+S+VVP +NE+E+I  F    +  ++ LK   V + +F+NDGSKD T +++  +A   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQE-LKPYEV-EIVFINDGSKDATESIINALAVSD  58

Query  62   PNVHYLSFSRNFgkeagllagleaadgdlITVMDADLQDPPELLINMYQKILEGYDVVGT  121
            P V  LSF+RNFGKE++L+AGL+ A GD +  +D DLQDP E++ ++ +K   G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPVIRSFFSKMFYKIINAVSDTEMVDGARDFRLMTRQVVDSILEFGEVNRFSK  181
            +R+DR  +  ++   +  FYK+ N +S   + +   DFRLM+R+VV++I  + E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GIFSWVGYDVTYIAYENRERVAGETSWNFWSLLKYSMEGFINFSEAPLDLSLWA--GTfs  239
            GI+SWVG +   + Y   ERVAG +  N W L + ++EG+ +FS  P  L +W+  G F 
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFP--LRVWTYIGLFV  236

Query  240  filsilgilfiiVRKLTIGGSVTGWASLVCiilfiggiqllalgiigKYISKIFLETKKR  299
              +S+L    +I+  L +G +V G +SL+  ILF+GG+QL+++G++G YI++I+LETK R
Sbjct  237  ASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSR  296

Query  300  PVYIVK  305
            P YI+K
Sbjct  297  PKYILK  302

863) SMUGS5_03690 in NC_018089


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  115 bits (419),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 194/307 (64%), Gaps = 8/307 (2%)

Query  2    KKLSIVIPCYNEEETIYPFLKETQKVERQMSDELFFDYYFINDGSSDKTLTVLREAAARF  61
             K+S+V+P +NEEE+I  F K  +  +   + E+  +  FINDGS D T +++   A   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKeaallagleavdgdlITVMDADLQDPPELLIKMYSKLKQGYDVVGT  121
              V  LSF+RNFGKE+AL+AGL+   GD +  +D DLQDP E++  +  K + G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPFIRSLFAKTFYWLINKISSTEMVDGARDFRLMTRQVVDSILKLGEVNRFSK  181
            +R+DR  +  ++   A  FY L NKIS+  + +   DFRLM+R+VV++I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVTYVAYENRERVAGKT---SWSFWTLLRYSMDGFINFSEAPLNLATWTGAi  238
            G++SWVG +   V Y   ERVAG +   +W +W L   +++G+ +FS  PL + T  G +
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLF  235

Query  239  sfllsiisilfiiiRKLTVGGSVTGWASMVsiilligglqllslgiigKYIAKIFLETKK  298
               +S++    +II  L  G +V G +S++  IL++GG+QL+++G++G YI++I+LETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  299  RPVYIVK  305
            RP YI+K
Sbjct  296  RPKYILK  302

864) SmuNN2025_1181 in NC_013928


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  115 bits (419),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 194/307 (64%), Gaps = 8/307 (2%)

Query  2    KKLSIVIPCYNEEETIYPFLKETQKVERQMSDELFFDYYFINDGSSDKTLTVLREAAARF  61
             K+S+V+P +NEEE+I  F K  +  +   + E+  +  FINDGS D T +++   A   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKeaallagleavdgdlITVMDADLQDPPELLIKMYSKLKQGYDVVGT  121
              V  LSF+RNFGKE+AL+AGL+   GD +  +D DLQDP E++  +  K + G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPFIRSLFAKTFYWLINKISSTEMVDGARDFRLMTRQVVDSILKLGEVNRFSK  181
            +R+DR  +  ++   A  FY L NKIS+  + +   DFRLM+R+VV++I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVTYVAYENRERVAGKT---SWSFWTLLRYSMDGFINFSEAPLNLATWTGAi  238
            G++SWVG +   V Y   ERVAG +   +W +W L   +++G+ +FS  PL + T  G +
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLF  235

Query  239  sfllsiisilfiiiRKLTVGGSVTGWASMVsiilligglqllslgiigKYIAKIFLETKK  298
               +S++    +II  L  G +V G +S++  IL++GG+QL+++G++G YI++I+LETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  299  RPVYIVK  305
            RP YI+K
Sbjct  296  RPKYILK  302

865) SMU_833 in NC_004350


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  115 bits (419),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 123/307 (41%), Positives = 194/307 (64%), Gaps = 8/307 (2%)

Query  2    KKLSIVIPCYNEEETIYPFLKETQKVERQMSDELFFDYYFINDGSSDKTLTVLREAAARF  61
             K+S+V+P +NEEE+I  F K  +  +   + E+  +  FINDGS D T +++   A   
Sbjct  1    MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEV--EIVFINDGSKDATESIINALAVSD  58

Query  62   ENVHYLSFSRNFGKeaallagleavdgdlITVMDADLQDPPELLIKMYSKLKQGYDVVGT  121
              V  LSF+RNFGKE+AL+AGL+   GD +  +D DLQDP E++  +  K + G ++V +
Sbjct  59   PLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLA  118

Query  122  RRADRKGEPFIRSLFAKTFYWLINKISSTEMVDGARDFRLMTRQVVDSILKLGEVNRFSK  181
            +R+DR  +  ++   A  FY L NKIS+  + +   DFRLM+R+VV++I  L E N F K
Sbjct  119  KRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMK  178

Query  182  GLFSWVGFDVTYVAYENRERVAGKT---SWSFWTLLRYSMDGFINFSEAPLNLATWTGAi  238
            G++SWVG +   V Y   ERVAG +   +W +W L   +++G+ +FS  PL + T  G +
Sbjct  179  GILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGLF  235

Query  239  sfllsiisilfiiiRKLTVGGSVTGWASMVsiilligglqllslgiigKYIAKIFLETKK  298
               +S++    +II  L  G +V G +S++  IL++GG+QL+++G++G YI++I+LETK 
Sbjct  236  VASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKS  295

Query  299  RPVYIVK  305
            RP YI+K
Sbjct  296  RPKYILK  302

866) STP_0618 in NC_015558


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  114 bits (417),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 97/235 (42%), Positives = 156/235 (67%), Gaps = 12/235 (5%)

Query  1    MLAGLEHARGDFITVMDADLQDPPELLIAMYDKIQEGYDVVGTRRKNREGEPPIRTFFSK  60
            ++AGL+HA GD +  +D DLQDP E++  + +K Q G ++V ++R +R  +  ++   + 
Sbjct  76   LFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAE  135

Query  61   LFYKVINIISDTKIVDGARDYRLMTKQVVDSILEMGEVNRFSKGIFAWVGYDTYYIPYEN  120
             FYK+ N IS  KI +   D+RLM+++VV++I  + E N F KGI++WVG +T  + Y  
Sbjct  136  WFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVR  195

Query  121  RERVAGES---SWNFWQLVRYSLEGYINFSEALLSIATYSGILSFIASIFGILF---VVI  174
             ERVAG S   +W++W+L   +LEG  +FS   L + TY G+  F+ASI ++L+   ++I
Sbjct  196  AERVAGISKFNGWKLWNL---ALEGITSFSTFPLRVWTYIGL--FVASI-SFLYGAWMII  249

Query  175  RKLTVGGSVNGWASMIVVilfigglqllclgilgKYVAKIFLETKKRPVYIVKET  229
              L  G +V G +S++V ILF+GG+QL+ +G+LG Y+++I+LETK RP YI+K  
Sbjct  250  DTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILKKG  304

867) HCN_1803 in NC_017761


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 100/247 (41%), Positives = 163/247 (66%), Gaps = 9/247 (3%)

Query  9    QPHLYALKLSRNFGHQNALLAGLHFVCNKCDCAVSIDCDLQQDEEKLDEFVVKFQNGADI  68
            +P + +L ++RNFG + AL+AGL+      D  ++ID DLQ+  E + +++ K Q GA++
Sbjct  58   DPLVVPLSFTRNFGKEPALFAGLDHASG--DAVIPIDVDLQDPIEVIPHLIEKWQAGAEM  115

Query  69   VLGVRYDRKTDSIFKKYSAIFFYKMMN-IFGVKIIKNHADYRLLSHKALKNLSAYKETHL  127
            VL+ R DR TD+ +K+ +A  FYK+ N I   KI  N +D+RL+S+  + N+    E +L
Sbjct  116  VLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNL  175

Query  128  FLRAIVLDMGQKPEIVYFDVKPRYAGDSKYSLKKMLSFAWNGITSFSIAPLRFVSAMGIG  187
            F+++I+  +G + ++V +    R AG SK++  K+ ++A +GITSFS  PLR V +  IG
Sbjct  176  FMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLR-VWTY-IG  233

Query  188  LFGLSVAFGMYVLWVKIFT---DSALPGWTSLATILCFLSGMQllglgiigeyigKMYQE  244
            LF  S++F +Y  W+ I T   ++++ G  SL   + FL+G+QL+G+G++GEYIG++Y E
Sbjct  234  LFVASISF-LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLE  292

Query  245  IKSRPKY  251
             KSRPKY
Sbjct  293  TKSRPKY  299

868) Y1U_C1378 in NC_017927


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  104 bits (378),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 146/215 (68%), Gaps = 6/215 (2%)

Query  1    MDADLQDPPELLIEMYAKIQEGYDVVGTRRADRKGEPPIRSFFAKAFYWLINKISDTEMV  60
            +D DLQDP E++ ++  K Q G ++V ++R+DR  +  ++   A  FY L NKIS   + 
Sbjct  91   IDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIE  150

Query  61   DGARDFRLMTRQVVDAILELKEVNRFSKGLFSWVGFDVAYVSYENCERVAGETSWSFWKL  120
            +   DFRLM+R+VV+ I  L E N F KG++SWVG +   V Y   ERVAG +  + WKL
Sbjct  151  ENVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKL  210

Query  121  LNYSLDGFINFSEVPLKLATWAGTFSFLISLVGIFF---VVIRKLTIGGSVAGWASLVSi  177
             N +L+G+ +FS  PL++  W+  ++++++ +++++   ++I  L +G +V G +SL+  
Sbjct  211  WNLALEGITSFSTFPLRV--WT-YIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVS  267

Query  178  ilfiggiqllalgiigNYISKIFLETKKRPVYIVK  212
            ILF+GG+QL+++G++G+YI++I+LETK RP YI+K
Sbjct  268  ILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYILK  302

869) HD73_5847 in NC_020238


> AF139596|6|G6|6453802|AAF09026.1|Shigella_flexneri_Y53|+|3948..4868|gtrBI|-|GtrBI
Length=306

 Score =  101 bits (365),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 92/226 (41%), Positives = 154/226 (69%), Gaps = 1/226 (0%)

Query  1    MLAGLKYATGDAIVIMDADLQHPPTLIKELLEGYNDGYDQVIAKRT-RTGDSPVRSFVSR  59
            ++AGL  A+GDA++ +D DLQ+P  +I +L+E  + G + V+AKR+ R+ D+ ++   + 
Sbjct  76   LFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRSDRSTDGRLKRKTAE  135

Query  60   LYYKVMNKFVDIELVDGIGDFRLLSRRAVDSLLSLSEYNRFSKGLFSWIGYNELIIEYEN  119
             +YK+ NK+    + + +GDFRL+SR  V+++  L+E N F KG++SW+G +  ++EY  
Sbjct  136  WFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVR  195

Query  120  VLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLSiylgllttilgllyVITTFVQIILGG  179
              R  G SK    KL N +++G+ SF+  PLR+  Y+GL+ + +++LY    +++ ++ G
Sbjct  196  AERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFG  255

Query  180  VEVPGYFTLISAilfiggiqliflgvigEYIGRIYYETKRRPHFIV  225
              V GY +L+ +ILF+GG+QLI +GV+GEYIGRIY ETK RP +I+
Sbjct  256  NPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL  301