Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of HH0295 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0295
( NP_859826.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

1e-94

100

2) HCBAA847_1478
( YP_007601339.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

1e-88

• Sequence Alignments

1) HH0295 in NC_004917


> NC_004917_P1|63|G63|32265794|NP_859826.1|Helicobacter_hepaticus_ATCC_51449|-|65631..66311|-|HH0295|hypothetical 
protein
Length=226

 Score =  339 bits (1271),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MKEKQDIRYDEFGEEILYEIRHNVFILDWISYiliflfslfiliafPIMISKIFADENPI  60
            MKEKQDIRYDEFGEEILYEIRHNVFILDWISYILIFLFSLFILIAFPIMISKIFADENPI
Sbjct  1    MKEKQDIRYDEFGEEILYEIRHNVFILDWISYILIFLFSLFILIAFPIMISKIFADENPI  60

Query  61   LVLIAVFYSPKSWLIFLLYIAIFYSVIDAYRQAFYYRKNKIYITNQGIGFECRHWFRMQK  120
            LVLIAVFYSPKSWLIFLLYIAIFYSVIDAYRQAFYYRKNKIYITNQGIGFECRHWFRMQK
Sbjct  61   LVLIAVFYSPKSWLIFLLYIAIFYSVIDAYRQAFYYRKNKIYITNQGIGFECRHWFRMQK  120

Query  121  GFFKFGEVGLVKYYTPRPFLERSNCFVYYFLNYQAPSKNYKYFNLIFMPKHYHKVFLCDE  180
            GFFKFGEVGLVKYYTPRPFLERSNCFVYYFLNYQAPSKNYKYFNLIFMPKHYHKVFLCDE
Sbjct  121  GFFKFGEVGLVKYYTPRPFLERSNCFVYYFLNYQAPSKNYKYFNLIFMPKHYHKVFLCDE  180

Query  181  YVTNQEREKLLNSIRQKTKEALESQGITISDAELKDKIKDLGYKDI  226
            YVTNQEREKLLNSIRQKTKEALESQGITISDAELKDKIKDLGYKDI
Sbjct  181  YVTNQEREKLLNSIRQKTKEALESQGITISDAELKDKIKDLGYKDI  226

2) HCBAA847_1478 in NC_020555


> NC_004917_P1|63|G63|32265794|NP_859826.1|Helicobacter_hepaticus_ATCC_51449|-|65631..66311|-|HH0295|hypothetical 
protein
Length=226

 Score =  319 bits (1195),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 214/226 (95%), Positives = 220/226 (98%), Gaps = 0/226 (0%)

Query  1    MNEKQDIRVDEFGEEILYEIRHNVFILDWisyiliflvslfiliAFPIMISKIFADENPI  60
            M+EKQDIR DEFGEEILYEIRHNVFILDWISYILIFL SLFILIAFPIMISKIFADENPI
Sbjct  1    MKEKQDIRYDEFGEEILYEIRHNVFILDWISYILIFLFSLFILIAFPIMISKIFADENPI  60

Query  61   LVLIAVFYSPKSWLIFLLYIAIFYSVIDAYRQVFYYRKNKIYITNQGIGFERRNWFRIQK  120
            LVLIAVFYSPKSWLIFLLYIAIFYSVIDAYRQ FYYRKNKIYITNQGIGFE R+WFR+QK
Sbjct  61   LVLIAVFYSPKSWLIFLLYIAIFYSVIDAYRQAFYYRKNKIYITNQGIGFECRHWFRMQK  120

Query  121  GFFRFGEVGLVKYYTPRPFLERSNCFVYYFLNHQAPSKNYRYFNLIFMPKHYHKVFLCDE  180
            GFF+FGEVGLVKYYTPRPFLERSNCFVYYFLN QAPSKNY+YFNLIFMPKHYHKVFLCDE
Sbjct  121  GFFKFGEVGLVKYYTPRPFLERSNCFVYYFLNYQAPSKNYKYFNLIFMPKHYHKVFLCDE  180

Query  181  YMTNQEREKLLNFIRQKTKEALESQGITISDAELKDKIKDLGYKDI  226
            Y+TNQEREKLLN IRQKTKEALESQGITISDAELKDKIKDLGYKDI
Sbjct  181  YVTNQEREKLLNSIRQKTKEALESQGITISDAELKDKIKDLGYKDI  226