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Homologs of HH0299 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0299
( NP_859830.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

2e-72

100

2) HCBAA847_1477
( YP_007601338.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

1e-68

3) HCBAA847_1475
( YP_007601336.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

6e-46

4) HCN_1364
( YP_006235679.1 )

hypothetical protein

NC_017761
(Helicobacter cinaedi PAGU611)

1e-38

• Sequence Alignments

1) HH0299 in NC_004917


> NC_004917_P1|67|G67|32265798|NP_859830.1|Helicobacter_hepaticus_ATCC_51449|-|67832..68410|-|HH0299|hypothetical 
protein
Length=192

 Score =  265 bits (991),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 182/182 (100%), Positives = 182/182 (100%), Gaps = 0/182 (0%)

Query  11   TAGIKIGLPNSSNKGFDVKAGIIDSnpnatynpnnnIKLYDSKDTYNRIPFAEVIMCNID  70
            TAGIKIGLPNSSNKGFDVKAGIIDSNPNATYNPNNNIKLYDSKDTYNRIPFAEVIMCNID
Sbjct  11   TAGIKIGLPNSSNKGFDVKAGIIDSNPNATYNPNNNIKLYDSKDTYNRIPFAEVIMCNID  70

Query  71   CQEFLKNATTLNTQNNIESTTNTESAHQNNTNQPFTYEDSNITAKEIINKDNTSTLVIES  130
            CQEFLKNATTLNTQNNIESTTNTESAHQNNTNQPFTYEDSNITAKEIINKDNTSTLVIES
Sbjct  71   CQEFLKNATTLNTQNNIESTTNTESAHQNNTNQPFTYEDSNITAKEIINKDNTSTLVIES  130

Query  131  NTNLLEYQGNTTDTLMSGISGVFASMATLAEKYGVDKSLKESTKGLGTKGRILAIISSTR  190
            NTNLLEYQGNTTDTLMSGISGVFASMATLAEKYGVDKSLKESTKGLGTKGRILAIISSTR
Sbjct  131  NTNLLEYQGNTTDTLMSGISGVFASMATLAEKYGVDKSLKESTKGLGTKGRILAIISSTR  190

Query  191  IL  192
            IL
Sbjct  191  IL  192

2) HCBAA847_1477 in NC_020555


> NC_004917_P1|67|G67|32265798|NP_859830.1|Helicobacter_hepaticus_ATCC_51449|-|67832..68410|-|HH0299|hypothetical 
protein
Length=192

 Score =  252 bits (941),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 171/180 (95%), Positives = 178/180 (99%), Gaps = 0/180 (0%)

Query  10   TAGIKIGLPNSSNKGFDVKAGIIDSnpnapynpnnnLKLYDSKDTYNRIPFAEVIMCNID  69
            TAGIKIGLPNSSNKGFDVKAGIIDSNPNA YNPNNN+KLYDSKDTYNRIPFAEVIMCNID
Sbjct  11   TAGIKIGLPNSSNKGFDVKAGIIDSNPNATYNPNNNIKLYDSKDTYNRIPFAEVIMCNID  70

Query  70   CEELLKNATTLNTQNNIESTTNTESAHQNNTNQPFTYQDSNITAKEIINKDNTSTLVIES  129
            C+E+LKNATTLNTQNNIESTTNTESAHQNNTNQPFTY+DSNITAKEIINKDNTSTLVIES
Sbjct  71   CQEFLKNATTLNTQNNIESTTNTESAHQNNTNQPFTYEDSNITAKEIINKDNTSTLVIES  130

Query  130  NTNLLEYQGNIADTLMSGLSGVFASMATLAEKYGVDKSLKESTKGLGTKGRILAIISSTK  189
            NTNLLEYQGN +DTLMSG+SGVFASMATLAEKYGVDKSLKESTKGLGTKGRILAIISST+
Sbjct  131  NTNLLEYQGNTTDTLMSGISGVFASMATLAEKYGVDKSLKESTKGLGTKGRILAIISSTR  190

3) HCBAA847_1475 in NC_020555


> NC_004917_P1|67|G67|32265798|NP_859830.1|Helicobacter_hepaticus_ATCC_51449|-|67832..68410|-|HH0299|hypothetical 
protein
Length=192

 Score =  177 bits (654),  Expect = 6e-46, Method: Compositional matrix adjust.
 Identities = 117/153 (77%), Positives = 134/153 (88%), Gaps = 7/153 (4%)

Query  19   FAPNNNIKLYDSKDTYNRIPFAEVIMCNIDCQEFLQNTSIPIKQDDFNITTQENTKspis  78
            + PNNNIKLYDSKDTYNRIPFAEVIMCNIDCQEFL+N++    Q++++ TT+ ++     
Sbjct  41   YNPNNNIKLYDSKDTYNRIPFAEVIMCNIDCQEFLKNATTLNTQNNIESTTNTES-----  95

Query  79   ittsqsnsiqpFTYEYSNITAKEIINKDNTSTLVIESNTNLLEYQGNIADTLMSGLSGVF  138
              + Q+N+ QPFTYE SNITAKEIINKDNTSTLVIESNTNLLEYQGN +DTLMSG+SGVF
Sbjct  96   --AHQNNTNQPFTYEDSNITAKEIINKDNTSTLVIESNTNLLEYQGNTTDTLMSGISGVF  153

Query  139  ASMATLAEKYGVDKSLKESTKGLGTKGRILASV  171
            ASMATLAEKYGVDKSLKESTKGLGTKGRILA +
Sbjct  154  ASMATLAEKYGVDKSLKESTKGLGTKGRILAII  186

4) HCN_1364 in NC_017761


> NC_004917_P1|67|G67|32265798|NP_859830.1|Helicobacter_hepaticus_ATCC_51449|-|67832..68410|-|HH0299|hypothetical 
protein
Length=192

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 103/149 (70%), Positives = 125/149 (84%), Gaps = 9/149 (6%)

Query  30   FAPNNNIKLYDSKDTYNRIPFAEVIMCNIDCQEFLQNTSIPIKQDDFNITTQENTKspis  89
            + PNNNIKLYDSKDTYNRIPFAEVIMCNIDCQEFL+N++    Q++++ TT+ ++     
Sbjct  41   YNPNNNIKLYDSKDTYNRIPFAEVIMCNIDCQEFLKNATTLNTQNNIESTTNTES-----  95

Query  90   ittsqsnsiqpFTYEDSNITAKEIINKDNTSTLVIESNTNLLEYQGNTTDTLMSGLSGVF  149
              + Q+N+ QPFTYEDSNITAKEIINKDNTSTLVIESNTNLLEYQGNTTDTLMSG+SGVF
Sbjct  96   --AHQNNTNQPFTYEDSNITAKEIINKDNTSTLVIESNTNLLEYQGNTTDTLMSGISGVF  153

Query  150  ASMATLAKQ--LDSHIKNNVRKFGVKGRI  176
            ASMATLA +  +D  +K++ + +G KGRI
Sbjct  154  ASMATLAEKYGVDKSLKESTKGLGTKGRI  182