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Homologs of orf7 gene of AY144117

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) LMHCC_2100
( YP_002351053.1 )

SMI1 / KNR4 family

NC_011660
(Listeria monocytogenes HCC23)

1e-44

2) lmo4a_0546
( YP_005925537.1 )

hypothetical protein

NC_017529
(Listeria monocytogenes L99)

1e-44

3) LMM7_0561
( YP_005946625.1 )

SMI1/KNR4 family

NC_017537
(Listeria monocytogenes M7)

1e-44

4) Dd1591_1507
( YP_003003843.1 )

hypothetical protein

NC_012912
(Dickeya zeae Ech1591)

2e-40

5) CSSP291_18000
( YP_007442456.1 )

SMI1/KNR4 family protein

NC_020260
(Cronobacter sakazakii Sp291)

2e-33

6) Bgr_15810
( YP_002972432.1 )

hypothetical protein

NC_012846
(Bartonella grahamii as4aup)

3e-22

7) Bgr_03120
( YP_002971339.1 )

hypothetical protein

NC_012846
(Bartonella grahamii as4aup)

1e-21

8) Bgr_08340
( YP_002971804.1 )

hypothetical protein

NC_012846
(Bartonella grahamii as4aup)

7e-20

9) Bgr_15800
( YP_002972431.1 )

hypothetical protein

NC_012846
(Bartonella grahamii as4aup)

9e-20

10) Bgr_15820
( YP_002972433.1 )

hypothetical protein

NC_012846
(Bartonella grahamii as4aup)

6e-17

11) Btr_1296
( YP_001609658.1 )

hypothetical protein

NC_010161
(Bartonella tribocorum CIP 105476)

2e-16

12) Btr_0395
( YP_001608847.1 )

hypothetical protein

NC_010161
(Bartonella tribocorum CIP 105476)

1e-15

13) Bgr_15170
( YP_002972390.1 )

hypothetical protein

NC_012846
(Bartonella grahamii as4aup)

2e-15

14) Btr_0399
( YP_001608851.1 )

hypothetical protein

NC_010161
(Bartonella tribocorum CIP 105476)

8e-13

• Sequence Alignments

1) LMHCC_2100 in NC_011660


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score =  172 bits (635),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 87/142 (62%), Positives = 125/142 (89%), Gaps = 0/142 (0%)

Query  1    MNRNELVNLLNKHAEIVNLGTSEDAPSTEWVNNAEKALSIKLPSDYKWFLETYGGGDICG  60
            MNR+EL++L+   ++++N+G+++DAPS EW+N++EKALS+ LP DYKWFL+ +GGGDICG
Sbjct  1    MNRDELIDLFAEYPDLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICG  60

Query  61   EEIYSIYSIPFDEAVGGDIVYQNVISSNNIMNGYVVVSNTDFGEEFFFDIKDMEKIYISL  120
            +EIYSIY IPF+EA+GGD+VYQN I++N + +G +VVSNTDFGEEF+F+ +++  +YISL
Sbjct  61   DEIYSIYCIPFEEAIGGDLVYQNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVEVYISL  120

Query  121  GAQKELYANNFIEYLNKRLMSY  142
            G+++ LYA+NFIE+L KRLMSY
Sbjct  121  GTENKLYASNFIEFLYKRLMSY  142

2) LMM7_0561 in NC_017537


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score =  172 bits (635),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 87/142 (62%), Positives = 125/142 (89%), Gaps = 0/142 (0%)

Query  1    MNRNELVNLLNKHAEIVNLGTSEDAPSTEWVNNAEKALSIKLPSDYKWFLETYGGGDICG  60
            MNR+EL++L+   ++++N+G+++DAPS EW+N++EKALS+ LP DYKWFL+ +GGGDICG
Sbjct  1    MNRDELIDLFAEYPDLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICG  60

Query  61   EEIYSIYSIPFDEAVGGDIVYQNVISSNNIMNGYVVVSNTDFGEEFFFDIKDMEKIYISL  120
            +EIYSIY IPF+EA+GGD+VYQN I++N + +G +VVSNTDFGEEF+F+ +++  +YISL
Sbjct  61   DEIYSIYCIPFEEAIGGDLVYQNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVEVYISL  120

Query  121  GAQKELYANNFIEYLNKRLMSY  142
            G+++ LYA+NFIE+L KRLMSY
Sbjct  121  GTENKLYASNFIEFLYKRLMSY  142

3) lmo4a_0546 in NC_017529


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score =  172 bits (635),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 87/142 (62%), Positives = 125/142 (89%), Gaps = 0/142 (0%)

Query  1    MNRNELVNLLNKHAEIVNLGTSEDAPSTEWVNNAEKALSIKLPSDYKWFLETYGGGDICG  60
            MNR+EL++L+   ++++N+G+++DAPS EW+N++EKALS+ LP DYKWFL+ +GGGDICG
Sbjct  1    MNRDELIDLFAEYPDLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICG  60

Query  61   EEIYSIYSIPFDEAVGGDIVYQNVISSNNIMNGYVVVSNTDFGEEFFFDIKDMEKIYISL  120
            +EIYSIY IPF+EA+GGD+VYQN I++N + +G +VVSNTDFGEEF+F+ +++  +YISL
Sbjct  61   DEIYSIYCIPFEEAIGGDLVYQNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVEVYISL  120

Query  121  GAQKELYANNFIEYLNKRLMSY  142
            G+++ LYA+NFIE+L KRLMSY
Sbjct  121  GTENKLYASNFIEFLYKRLMSY  142

4) Dd1591_1507 in NC_012912


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score =  158 bits (583),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 80/127 (63%), Positives = 115/127 (91%), Gaps = 0/127 (0%)

Query  17   VNFGTADDAPSSEWIQKAEQALGVTLPEDYKWFLSEFGGGDICGEEIYSIYCLPFDEAVG  76
            +N G+ADDAPS+EWI+K+E+AL++TLP+DYKWFL++FGGGDICG+EIYSIYC+PF+EA+G
Sbjct  17   LNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDEIYSIYCIPFEEAIG  76

Query  77   GDLVYQNVISSDNVSIGKIVLSNTDFGEEYYFKIDEISKVYVSIGNKEMLYANDFIEYIK  136
            GDLVYQN I+++ ++ G++V+SNTDFGEE+YF+ +++  VY+S+G  + LYA++FIE++ 
Sbjct  77   GDLVYQNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVEVYISLGTENKLYASNFIEFLY  136

Query  137  KRLMSYS  143
            KRLMSY 
Sbjct  137  KRLMSYK  143

5) CSSP291_18000 in NC_020260


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 87/142 (62%), Positives = 122/142 (86%), Gaps = 0/142 (0%)

Query  1    MNREEIVKLFEKHSDLVNMGTSDDAPDNSWVEAAEKALSVNLPADYIWFLKNygggeicg  60
            MNR+E++ LF   +DL+NMG++DDAP   W++ +EKALS+ LP DY WFL+N+GGG+ICG
Sbjct  1    MNRDELIDLFAEYPDLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICG  60

Query  61   eeiysiycLPFNDAVGGDIVYQNTIANNNLDVGKIVLSNTDFGEEFFFDVKDMEKVYVST  120
            +EIYSIYC+PF++A+GGD+VYQNTIANN L+ G++V+SNTDFGEEF+F+ +++  VY+S 
Sbjct  61   DEIYSIYCIPFEEAIGGDLVYQNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVEVYISL  120

Query  121  GSNRELYASNFLEYLKKRLLSY  142
            G++  LYASNF+E+L KRL+SY
Sbjct  121  GTENKLYASNFIEFLYKRLMSY  142

6) Bgr_15810 in NC_012846


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 97.8 bits (352),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 60/145 (42%), Positives = 97/145 (67%), Gaps = 7/145 (4%)

Query  7    ADVAQLINKYPDVIDFGTAEDAPDDILIEKAERTLGLQFTSSYKSFLKNYGGGEIGCEEI  66
             ++ +L+  YPD+++ G+A+DAP    I+K+E++L+L +   YK FL+N+GGG+I  +EI
Sbjct  4    DELIDLFAEYPDLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDEI  63

Query  67   FSIYGVDFETVYGGDIVYNRLTEMKNGLAKSQQLVVSRTDFGETFYFDYSQFQDGECPLY  126
            +SIY + FE   GGD+VY+    + N   +  +LVVS TDFGE FYF+ +++ +    +Y
Sbjct  64   YSIYCIPFEEAIGGDLVYQ--NTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVE----VY  117

Query  127  FEVISGDPLYYASNFYEFLCKRIKD  151
            + + + + L YASNF EFL KR+  
Sbjct  118  ISLGTENKL-YASNFIEFLYKRLMS  141

7) Bgr_03120 in NC_012846


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 95.7 bits (344),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 59/144 (41%), Positives = 96/144 (67%), Gaps = 7/144 (4%)

Query  7    ADVAQLINKYPDVIDFGTAEDAPDDILIEKAERTLGLQFTSSYKSFLKNYGVGEIGGYEI  66
             ++ +L+  YPD+++ G+A+DAP    I+K+E++L+L +   YK FL+N+G G+I G EI
Sbjct  4    DELIDLFAEYPDLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDEI  63

Query  67   FSIYNASFEDNPAGDIVYYHLTDIKNGLAKPQQLVVNRTDFGETFYFDYTQFQDGECPLY  126
            +SIY  +FE+  +GD+VY     I N   +  +LVV+ TDFGE FYF+  ++ +    +Y
Sbjct  64   YSIYCIPFEEAIGGDLVY--QNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVE----VY  117

Query  127  LRFPPSDPQYYASNFYEFLCKRIM  150
            + +  ++ + YASNF EFL KR+M
Sbjct  118  ISL-GTENKLYASNFIEFLYKRLM  140

8) Bgr_08340 in NC_012846


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 89.9 bits (322),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 60/147 (41%), Positives = 94/147 (64%), Gaps = 12/147 (8%)

Query  7    DDVAQLVDKYSDIINFGSAEDAPDDVWIKRAEETLGLQFTSSYKAFLKHYKGGDIAGYEI  66
            D++ +L   Y+D++N GSA+DAP   WI+++E +L+L +   YK FL+++ GGDI G EI
Sbjct  4    DELIDLFAEYPDLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDEI  63

Query  67   YSLYKECGEDIPFDDIVLQNLNYYRK--HGFVTPEQLAVSRTDFGETFYFDYTQFRDGEC  124
            YS+Y  C   IPF++ +  +L Y     + ++   +L VS TDFGE FYF+  ++ +   
Sbjct  64   YSIY--C---IPFEEAIGGDLVYQNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVE---  115

Query  125  PLYVMLPSEDCEYYASNFYEFLCKRIK  151
             +Y+ L +E+   YASNF EFL KR+ 
Sbjct  116  -VYISLGTEN-KLYASNFIEFLYKRLM  140

9) Bgr_15800 in NC_012846


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 89.7 bits (321),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 58/143 (41%), Positives = 92/143 (65%), Gaps = 8/143 (5%)

Query  12   LIDKVNKYDDEIINFGTAEDAPDDVWIKRAEETLGLQFTSSYKSFLKNYGGGEIGCEEIF  71
            LID    Y D ++N G+A+DAP   WI+++E +L+L +   YK FL+N+GGG+I  +EI+
Sbjct  6    LIDLFAEYPD-LLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDEIY  64

Query  72   SIYNASFEDHPAGDIVHKNLYHRKHGFATLEQLVVNRTDFGETFYFDYTQFQDGECPLYV  131
            SIY  +FE+  +GD+V +N     + +    +LVV+ TDFGE FYF+  ++ +    +Y+
Sbjct  65   SIYCIPFEEAIGGDLVYQN--TIANNYLNEGRLVVSNTDFGEEFYFNTNNLVE----VYI  118

Query  132  EIPSGASHYYASNFYEFLCKRIK  154
             + +  +  YASNF EFL KR+ 
Sbjct  119  SL-GTENKLYASNFIEFLYKRLM  140

10) Bgr_15820 in NC_012846


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 59/144 (41%), Positives = 95/144 (66%), Gaps = 7/144 (4%)

Query  7    ADVAELVEKYSDIVDFGTAEDAPDDILIEKAERTLGLQFTSSYKSFLKNygggeiggyei  66
             ++ +L   Y+D+++ G+A+DAP    I+K+E++L+L +   YK FL+N+GGG+I G EI
Sbjct  4    DELIDLFAEYPDLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDEI  63

Query  67   FSIYNASFEDNPAGDIVYYHLTDIKNGLAKPQQLVVNRTDFGETFYFDYTQFQDGECPLY  126
            +SIY  +FE+  +GD+VY     I N   +  +LVV+ TDFGE FYF+  ++ +    +Y
Sbjct  64   YSIYCIPFEEAIGGDLVY--QNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVE----VY  117

Query  127  VEIPSGASHYYASNFYEFLCKRIM  150
            + + +  +  YASNF EFL KR+M
Sbjct  118  ISLGT-ENKLYASNFIEFLYKRLM  140

11) Btr_1296 in NC_010161


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 78.4 bits (278),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 61/145 (43%), Positives = 91/145 (63%), Gaps = 9/145 (6%)

Query  7    DDVIQLVDKYNGDIINFGTEDDAVDDLQIEKAEKALGLQFTSSYKSFLEHCKGGDIGGDE  66
            D++I+L   Y  D++N G+ DDA     I+K+EKAL+L +   YK FL++  GGDI GDE
Sbjct  4    DELIDLFAEYP-DLLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDE  62

Query  67   IYSLYEHHIGISV-NDIVFQNLNDRERGFVTAEQLVVSRTDFGETFYFDYTQFQDGECPL  125
            IYS+Y   +  ++  D+V+Q  N     ++   +LVVS TDFGE FYF+  ++ +    +
Sbjct  63   IYSIYCIPFEEAIGGDLVYQ--NTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVE----V  116

Query  126  YVMLPSEDCEYYASNFYEFLCKRIK  150
            Y+ L +E+   YASNF EFL KR+ 
Sbjct  117  YISLGTEN-KLYASNFIEFLYKRLM  140

12) Btr_0395 in NC_010161


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 76.0 bits (269),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 61/148 (42%), Positives = 93/148 (63%), Gaps = 13/148 (8%)

Query  12   LIDKVNKYDDDIITFGSEDDEENETDDLQIEKAEKTLGLQFTSSYKVFLKKYGGGEIGGD  71
            LID    Y D ++  GS DD  +      I+K+EK+L+L +   YK FL+++GGG+I GD
Sbjct  6    LIDLFAEYPD-LLNMGSADDAPSPE---WINKTEKALSLTLPDDYKWFLNNFGGGDICGD  61

Query  72   EVFSIY-GDYGEGIPAGDIVYRNLLDRKDGFATPEQLVVSRTDFGETFYFDYTQFQDGEC  130
            E++SIY   + E+I +GD+VY+N +   + +    +LVVS TDFGE FYF+  ++ +   
Sbjct  62   EIYSIYCIPFEEAI-GGDLVYQNTIA--NNYLNEGRLVVSNTDFGEEFYFNTNNLVE---  115

Query  131  PLYVMLPSEDCEYYASNFYEFLCKRIKE  158
             +Y+ L +E+   YASNF EFL KR+  
Sbjct  116  -VYISLGTEN-KLYASNFIEFLYKRLMS  141

13) Bgr_15170 in NC_012846


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 75.0 bits (265),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 59/146 (41%), Positives = 89/146 (61%), Gaps = 13/146 (8%)

Query  12   LIDKVNKYDDDIVSFGIAENAVDDLVIEKAEKALGLQFTSSYKAFLKHYKGGDIAGYEIY  71
            LID    Y D +++ G A++A     I+K+EKAL+L +   YK FL+++ GGDI G EIY
Sbjct  6    LIDLFAEYPD-LLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDEIY  64

Query  72   SLYKECGEDIPFDDIVLQNLNYYRK--HGFVTPEQLAVSRTDFGETFYFDYTQFRDGECP  129
            S+Y  C   IPF++ +  +L Y     + ++   +L VS TDFGE FYF+  ++ +    
Sbjct  65   SIY--C---IPFEEAIGGDLVYQNTIANNYLNEGRLVVSNTDFGEEFYFNTNNLVE----  115

Query  130  LYVRLPSEDCEYYASNFYEFLCKRIK  155
            +Y+ L +E+   YASNF EFL KR+ 
Sbjct  116  VYISLGTEN-KLYASNFIEFLYKRLM  140

14) Btr_0399 in NC_010161


> AY144117|7|G7|27497169|AAN64199.1|Photorhabdus_luminescens_W14|+|12780..13211|orf7|-|Orf7
Length=143

 Score = 66.6 bits (233),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 61/143 (43%), Positives = 94/143 (66%), Gaps = 8/143 (5%)

Query  12   LIDKVNKYDDDIINFGTAEDAPDDILIEKAERTLGLQFTSSYKSFLKNYgggeigseeif  71
            LID    Y D ++N G+A+DAP    I+K+E++L+L +   YK FL+N+GGG+I ++EI+
Sbjct  6    LIDLFAEYPD-LLNMGSADDAPSPEWINKTEKALSLTLPDDYKWFLNNFGGGDICGDEIY  64

Query  72   siYNASFEEHPAGDIVDKNLYHRKYGFVTLEQLVVSRTDFGETFYFDYTQFQDGECPLYL  131
            SIY  +FEE  +GD+V +N    +Y  +   +LVVS TDFGE FYF+  ++ +    +Y+
Sbjct  65   SIYCIPFEEAIGGDLVYQNTIANNY--LNEGRLVVSNTDFGEEFYFNTNNLVE----VYI  118

Query  132  KFPPRDPQYYASNFYEFLCKRIK  154
             +   + + YASNF EFL KR+ 
Sbjct  119  SLGT-ENKLYASNFIEFLYKRLM  140