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Homologs of SC1041 gene of NC_006905_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SPC_2661
( YP_002638203.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

3e-35

100

2) SC1041
( YP_216028.1 )

inner membrane protein

NC_006905
(Salmonella enterica SC-B67)

3e-35

100

3) SPAB_02466
( YP_001588680.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-31

4) SeHA_C1199
( YP_002045090.1 )

hypothetical protein

NC_011083
(Salmonella enterica SL476)

1e-31

5) SN31241_21570
( YP_008360074.1 )

Pathogenicity island encoded protein: SPI5

NC_021902
(Salmonella enterica USMARC-S3124.1)

1e-31

6) STM14_1235
( YP_005236823.1 )

putative inner membrane protein

NC_016856
(Salmonella enterica 14028S)

3e-31

7) STMMW_11011
( YP_005232158.1 )

inner membrane protein

NC_016854
(Salmonella enterica D23580)

3e-31

8) STM1089
( NP_460062.1 )

inner membrane protein

NC_003197
(Salmonella enterica LT2)

3e-31

9) SL1344_1028
( YP_005180941.1 )

inner membrane protein

NC_016810
(Salmonella enterica SL1344)

3e-31

10) STM474_1081
( YP_005241985.1 )

putative inner membrane protein

NC_016857
(Salmonella enterica ST4/74)

3e-31

11) STMUK_1058
( YP_005251599.1 )

putative inner membrane protein

NC_016863
(Salmonella enterica UK-1)

3e-31

12) SSPA1636
( YP_002142476.1 )

inner membrane protein

NC_011147
(Salmonella enterica AKU12601)

2e-30

13) SPA1761
( YP_150991.1 )

inner membrane protein

NC_006511
(Salmonella enterica ATCC 9150)

2e-30

14) SeD_A1165
( YP_002215021.1 )

inner membrane protein

NC_011205
(Salmonella enterica CT_02021853)

3e-30

• Sequence Alignments

1) SC1041 in NC_006905


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  1    MLLVSLIFSITHAslslnkqlsllsenllkekIISTNIFCSISTYSRINVRRWRKNLMSR  60
            MLLVSLIFSITHASLSLNKQLSLLSENLLKEKIISTNIFCSISTYSRINVRRWRKNLMSR
Sbjct  1    MLLVSLIFSITHASLSLNKQLSLLSENLLKEKIISTNIFCSISTYSRINVRRWRKNLMSR  60

Query  61   NTYTLKMLPQTEQNERDERLPLTFPPKILVLSLVKGIRIAFYLIKKVC  108
            NTYTLKMLPQTEQNERDERLPLTFPPKILVLSLVKGIRIAFYLIKKVC
Sbjct  61   NTYTLKMLPQTEQNERDERLPLTFPPKILVLSLVKGIRIAFYLIKKVC  108

2) SPC_2661 in NC_012125


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  1    MLLVSLIFSITHAslslnkqlsllsenllkekIISTNIFCSISTYSRINVRRWRKNLMSR  60
            MLLVSLIFSITHASLSLNKQLSLLSENLLKEKIISTNIFCSISTYSRINVRRWRKNLMSR
Sbjct  1    MLLVSLIFSITHASLSLNKQLSLLSENLLKEKIISTNIFCSISTYSRINVRRWRKNLMSR  60

Query  61   NTYTLKMLPQTEQNERDERLPLTFPPKILVLSLVKGIRIAFYLIKKVC  108
            NTYTLKMLPQTEQNERDERLPLTFPPKILVLSLVKGIRIAFYLIKKVC
Sbjct  61   NTYTLKMLPQTEQNERDERLPLTFPPKILVLSLVKGIRIAFYLIKKVC  108

3) SeHA_C1199 in NC_011083


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 75/77 (98%), Positives = 76/77 (99%), Gaps = 0/77 (0%)

Query  16   KIISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL  75
            KIISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL
Sbjct  32   KIISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL  91

Query  76   SLVKGIRIAFYLIKKVC  92
            SLVKGIRIAFYLIKKVC
Sbjct  92   SLVKGIRIAFYLIKKVC  108

4) SN31241_21570 in NC_021902


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 75/77 (98%), Positives = 76/77 (99%), Gaps = 0/77 (0%)

Query  16   KIISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL  75
            KIISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL
Sbjct  32   KIISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL  91

Query  76   SLVKGIRIAFYLIKKVC  92
            SLVKGIRIAFYLIKKVC
Sbjct  92   SLVKGIRIAFYLIKKVC  108

5) SPAB_02466 in NC_010102


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 75/77 (98%), Positives = 76/77 (99%), Gaps = 0/77 (0%)

Query  16   KIISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL  75
            KIISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL
Sbjct  32   KIISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL  91

Query  76   SLVKGIRIAFYLIKKVC  92
            SLVKGIRIAFYLIKKVC
Sbjct  92   SLVKGIRIAFYLIKKVC  108

6) STM14_1235 in NC_016856


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 74/76 (98%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  31   IISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  90
            IISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS
Sbjct  33   IISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92

Query  91   LVKGIRIAFYLIKKVC  106
            LVKGIRIAFYLIKKVC
Sbjct  93   LVKGIRIAFYLIKKVC  108

7) STMMW_11011 in NC_016854


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 74/76 (98%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  31   IISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  90
            IISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS
Sbjct  33   IISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92

Query  91   LVKGIRIAFYLIKKVC  106
            LVKGIRIAFYLIKKVC
Sbjct  93   LVKGIRIAFYLIKKVC  108

8) STM1089 in NC_003197


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 74/76 (98%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  31   IISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  90
            IISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS
Sbjct  33   IISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92

Query  91   LVKGIRIAFYLIKKVC  106
            LVKGIRIAFYLIKKVC
Sbjct  93   LVKGIRIAFYLIKKVC  108

9) SL1344_1028 in NC_016810


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 74/76 (98%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  33   IISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92
            IISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS
Sbjct  33   IISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92

Query  93   LVKGIRIAFYLIKKVC  108
            LVKGIRIAFYLIKKVC
Sbjct  93   LVKGIRIAFYLIKKVC  108

10) STM474_1081 in NC_016857


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 74/76 (98%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  31   IISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  90
            IISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS
Sbjct  33   IISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92

Query  91   LVKGIRIAFYLIKKVC  106
            LVKGIRIAFYLIKKVC
Sbjct  93   LVKGIRIAFYLIKKVC  108

11) STMUK_1058 in NC_016863


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 74/76 (98%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  31   IISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  90
            IISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS
Sbjct  33   IISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92

Query  91   LVKGIRIAFYLIKKVC  106
            LVKGIRIAFYLIKKVC
Sbjct  93   LVKGIRIAFYLIKKVC  108

12) SSPA1636 in NC_011147


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 73/76 (97%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  31   IISFNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNEKEERLPLTFPPKILVLS  90
            IIS NIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNE++ERLPLTFPPKILVLS
Sbjct  33   IISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92

Query  91   LVKGIRIAFYLIKKVC  106
            LVKGIRIAFYLIKKVC
Sbjct  93   LVKGIRIAFYLIKKVC  108

13) SPA1761 in NC_006511


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 73/76 (97%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  31   IISFNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNEKEERLPLTFPPKILVLS  90
            IIS NIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNE++ERLPLTFPPKILVLS
Sbjct  33   IISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVLS  92

Query  91   LVKGIRIAFYLIKKVC  106
            LVKGIRIAFYLIKKVC
Sbjct  93   LVKGIRIAFYLIKKVC  108

14) SeD_A1165 in NC_011205


> NC_006905_P1|7|G3|62179611|YP_216028.1|Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67|+|2214..2540|-|SC1041|inner 
membrane protein
Length=108

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 71/77 (93%), Positives = 74/77 (97%), Gaps = 0/77 (0%)

Query  16   KIISTNIFCSISTYTRINARRWRKNLMSRNTYTLKMPPQKEQNEKEERLPLTFPPKILVL  75
            KIISTNIFCSISTY+RIN RRWRKNLMSRNTYTLKM PQ EQNE++ERLPLTFPPKILVL
Sbjct  32   KIISTNIFCSISTYSRINVRRWRKNLMSRNTYTLKMLPQTEQNERDERLPLTFPPKILVL  91

Query  76   SLVKGIRIAFYLIKKVC  92
            SLVKGIRIAFYLIKKVC
Sbjct  92   SLVKGIRIAFYLIKKVC  108