Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of ef0076 gene of AF454824

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EF0550
( NP_814320.1 )

xylose repressor

NC_004668
(Enterococcus faecalis V583)

7e-173

100

2) MPD5_1522
( YP_005320219.1 )

xylose repressor XylR, ROK family

NC_016938
(Melissococcus plutonius DAT561)

1e-92

3) MPTP_0373
( YP_004455665.1 )

xylose repressor XylR, ROK family

NC_015516
(Melissococcus plutonius ATCC 35311)

7e-90

4) ECBG_02604
( YP_007753791.1 )

hypothetical protein

NC_020995
(Enterococcus casseliflavus EC20)

3e-68

5) xylR
( YP_001089580.1 )

transcriptional regulator

NC_009089
(Clostridium difficile 630)

8e-68

6) xylR
( YP_003215869.1 )

xylose repressor

NC_013315
(Clostridium difficile CD196)

4e-67

7) xylR
( YP_003219376.1 )

xylose repressor

NC_013316
(Clostridium difficile R20291)

4e-67

8) SSUJS14_1343
( YP_006076681.1 )

xylose operon repressor

NC_017618
(Streptococcus suis JS14)

1e-65

9) NJAUSS_1274
( YP_007571222.1 )

Xylose repressor

NC_020526
(Streptococcus suis SC070731)

1e-65

10) xylR2
( YP_004375822.1 )

xylose repressor

NC_015391
(Carnobacterium sp. 17-4)

4e-64

• Sequence Alignments

1) EF0550 in NC_004668


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  599 bits (2263),  Expect = 7e-173, Method: Compositional matrix adjust.
 Identities = 388/388 (100%), Positives = 388/388 (100%), Gaps = 0/388 (0%)

Query  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60
            MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GEATNRGRKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKNV  120
            GEATNRGRKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKNV
Sbjct  61   GEATNRGRKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKNV  120

Query  121  QDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEYN  180
            QDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEYN
Sbjct  121  QDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEYN  180

Query  181  FPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHTI  240
            FPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHTI
Sbjct  181  FPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHTI  240

Query  241  LFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIEQ  300
            LFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIEQ
Sbjct  241  LFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIEQ  300

Query  301  YAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDiiniiqrnlnnqFTKDVLVINSPIEWN  360
            YAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEWN
Sbjct  301  YAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEWN  360

Query  361  PVISGAISLSIQKFLNIEQLKLGKLNKI  388
            PVISGAISLSIQKFLNIEQLKLGKLNKI
Sbjct  361  PVISGAISLSIQKFLNIEQLKLGKLNKI  388

2) MPD5_1522 in NC_016938


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  333 bits (1248),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 211/383 (56%), Positives = 306/383 (80%), Gaps = 2/383 (0%)

Query  1    MVYSKYTIREQNEATILNYIIKNKEISRAKLAEISSLNKASVSSIVKKLIDEQFILETKI  60
            M+ SKYTIREQNEA ILN IIK++EISRA L+ I+SLNKASVSSI +KLI++ FI+E +I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GESSESGGRKPILLTFN-QTTALLIGIDLGDNYVDALLSYIDGTEITRIQLKNSTIHAKN  119
            GE+++ G RKPI+LTFN  ++AL+I+IDLG NY+D+ L+ +DG EI R+QL ++ ++ KN
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  120  VETIIHTIVTECEKQAPQTPHGIVGLTIGIHGQVFKEMIRFTPYYDLENINLTQRLNDRY  179
            V+ +IH +  +   + P+T  GIVG+TI+++GQV+++ I  T+Y DL +INL + LN+ Y
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  180  EFPVYLENEANLSALGEYTFSSDYESLVTISLHRGIGAGIVKQGKLTIGYQGNAGEIGHT  239
            +FPV+L+NEANLSALGEYTFSSD E+L +ISLH GIG G+VK+GKL +G +G AG++GHT
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  240  ILIPNGRQCPCGNKGCLEQYCSMkiicdeikekkkWHDFNMDRLVQAYHDNDALLVSQIE  299
            IL+PNGR+C CGN GCLE+YCS ++I +EI   K+ + +N D +   Y+++++ +V  IE
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  300  KYAELLaiginniiainaPQLVIFNSSLTQALPEMVALIKKQLTNRFSKDVVIMNSATTW  359
            +YA  L+IG+NN I + AP+LVIFNS+LT+ +P+++ +I+++L N+F+KDV+++NS+  W
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  360  NPAIYGALAYSAQRFLNIKQLKL  382
            NP I GA++ S Q+FLNI QLKL
Sbjct  360  NPVISGAISLSIQKFLNIEQLKL  382

3) MPTP_0373 in NC_015516


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  323 bits (1213),  Expect = 7e-90, Method: Compositional matrix adjust.
 Identities = 212/383 (56%), Positives = 306/383 (80%), Gaps = 2/383 (0%)

Query  1    MVYSKYTIREQNEATILNYIIKNKEISRAKLAEISSLNKASVSSIVKKLIDEQFILETKI  60
            M+ SKYTIREQNEA ILN IIK++EISRA L+ I+SLNKASVSSI +KLI++ FI+E +I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GESSESGGRKPILLTFN-QTTALLIGIDLGDNYIDALLSYIDGTEITRIQLKNSTIHAKN  119
            GE+++ G RKPI+LTFN  ++AL+I+IDLG NYID+ L+ +DG EI R+QL ++ ++ KN
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  120  VetiihtiiteceKQAPQTPHGIVGLTIGIHGQVFKEMIRFTPYYDLENINLAKRLNDRY  179
            V+ +IH ++ +   + P+T  GIVG+TI+++GQV+++ I  T+Y DL +INL   LN+ Y
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  180  EFPVYLENEANLSALGEYTFSSDYESLVTISLHRGIGAGIVKQGKLTIGYQGNAGEIGHT  239
            +FPV+L+NEANLSALGEYTFSSD E+L +ISLH GIG G+VK+GKL +G +G AG++GHT
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  240  ILIPNGRQCPCGNKGCLEQYCSMkiicdeikekkkWHDFNMDRLVQAYHDNDALLVSQIE  299
            IL+PNGR+C CGN GCLE+YCS ++I +EI   K+ + +N D +   Y+++++ +V  IE
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  300  KYAELLaiginniiainaPQLVIFNSSLTQALPEMVALIKKQLTNRFSKDVVIMNSATTW  359
            +YA  L+IG+NN I + AP+LVIFNS+LT+ +P+++ +I+++L N+F+KDV+++NS+  W
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  360  NPAIYGALAYSAQRFLNIKQLKL  382
            NP I GA++ S Q+FLNI QLKL
Sbjct  360  NPVISGAISLSIQKFLNIEQLKL  382

4) ECBG_02604 in NC_020995


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  252 bits (940),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 165/387 (43%), Positives = 270/387 (70%), Gaps = 2/387 (0%)

Query  1    MIINKMGIREQNEAAVLKTIIDNENVSRAEVSNLTHLNKASVSQITKKLIDTDFVREVGI  60
            MI +K  IREQNEA +L+ II + ++SRAE+S++T LNKASVS IT+KLI+ +F+ E  I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GDSTSIGGRKPIQLQFN-HRSSLAVTFDIGYNYVRGMLSYINGEMIASADHSHELITKEN  119
            G++T+  GRKPI L FN   S+L +++D+GYNY+ G L+ ++G  I   +  +  + K N
Sbjct  61   GEATN-RGRKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  120  VLATIDSMMKEFWPQMPQTTHGLVGICLAIHGIVHNQTVTFAPYYDLEHFDLIAPLSQKY  179
            V   I+ + +++ ++ P+T  G+VG+ +A++G V N+ +  ++Y DL +++L+  L+Q Y
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  180  NTAVYIENEANLTALGEYCFSSDSTNLLSVSVHSGIGVGIIVDGQLQTGTHGMAGEVGHS  239
            N +V+++NEANL+ALGEY FSSD  NL S+S+HSGIGVG++ +G+L+ G  G AG++GH+
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  240  TLFPHGNLCPCGNRGCLEQYASNKVLFDTYSHYTKTAFVNSDTFAQAYHAGEKSAVELAQ  299
             LFP+G  C CGN+GCLE+Y S +V+++  S   +   +NSD  +  Y+  E   V + +
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  300  QNVEFLSIGLNNVITFSDPEEVYINSSVYRKIPDLLLALQQKLTSQFTKNTKIKNSRLGD  359
            Q   +LSIG+NN I +  PE V +NS++ +KIPD++  +Q++L +QFTK+  + NS +  
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  360  QAPLFGGNVLVAKHFLNINDLRFAALD  386
            ++ + G+  L  + FLNI++L+++ L+
Sbjct  360  NPVISGAISLSIQKFLNIEQLKLGKLN  386

5) xylR in NC_009089


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  250 bits (934),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 160/383 (42%), Positives = 280/383 (74%), Gaps = 2/383 (0%)

Query  1    MVTDKYTIREMNERLVLEQIIKNGPISRASIASTIGLNKATISAITKKLIDESLVHEIGI  60
            M++ KYTIRE NE  +L+QIIK+  ISRA ++   +LNKA++S+IT+KLI+++++ E  I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GNSTHSGGRKPILLVFN-KCAGISLSMDIGYDYIFSSLSYLDGTIINSKKLTDIQVSKDN  119
            G++T+ G RKPI+L FN   +++ +++D+GY+YI ++L+ LDG  I+  +L D  V+K N
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  120  VIQLIDEIINSYNISKIDTPYKVIGLTLAIHGITCENKVLFTPYYNLNEIDLYSILSKKY  179
            V +LI+ ++N       +T Y ++G+T+A++G   +NK++ T+Y +L EI+L  +L++ Y
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  180  DFPIHIENEANLTALAENTFSTVHNsllslsihsgfgsgiiiNNKLYSGRNGMSGEIGHT  239
            +FP+ ++NEANL+AL+E TFS+  ++L S+S+HSG+G G++ N KL  G +G +G++GHT
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  240  IIMPNGKLCPCGNRGCLEQYCSEKKVFEQLSSLENIPKIDSDIVKQLYYEDNQNAKKVIH  299
            I+ PNG+ C CGN+GCLE+YCS + +++++S   N+ KI+SD+V  LY + + +  K+I+
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  300  EFCSYLTIAINNAITTYAPEIIYLNSQIISDIPEILQITKDMLVSSFNKGINIEISSLGS  359
            ++  YL+I++NNAI  YAPE++ +NS +   IP+I++I +  L + F K++ +  S++  
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  360  EASLYGGSAVNIKSFLNIQNLTL  382
            ++ + G+ +++I+ FLNI++L L
Sbjct  360  NPVISGAISLSIQKFLNIEQLKL  382

6) CDBI1_14745 in NC_017179


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  250 bits (934),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 160/383 (42%), Positives = 280/383 (74%), Gaps = 2/383 (0%)

Query  1    MVTDKYTIREMNERLVLEQIIKNGPISRASIASTIGLNKATISAITKKLIDESLVHEIGI  60
            M++ KYTIRE NE  +L+QIIK+  ISRA ++   +LNKA++S+IT+KLI+++++ E  I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GNSTHSGGRKPILLVFN-KCAGISLSMDIGYDYIFSSLSYLDGTIINSKKLTDIQVSKDN  119
            G++T+ G RKPI+L FN   +++ +++D+GY+YI ++L+ LDG  I+  +L D  V+K N
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  120  VIQLIDEIINSYNISKIDTPYKVIGLTLAIHGITCENKVLFTPYYNLNEIDLYSILSKKY  179
            V +LI+ ++N       +T Y ++G+T+A++G   +NK++ T+Y +L EI+L  +L++ Y
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  180  DFPIHIENEANLTALAENTFSTVHNsllslsihsgfgsgiiiNNKLYSGRNGMSGEIGHT  239
            +FP+ ++NEANL+AL+E TFS+  ++L S+S+HSG+G G++ N KL  G +G +G++GHT
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  240  IIMPNGKLCPCGNRGCLEQYCSEKKVFEQLSSLENIPKIDSDIVKQLYYEDNQNAKKVIH  299
            I+ PNG+ C CGN+GCLE+YCS + +++++S   N+ KI+SD+V  LY + + +  K+I+
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  300  EFCSYLTIAINNAITTYAPEIIYLNSQIISDIPEILQITKDMLVSSFNKGINIEISSLGS  359
            ++  YL+I++NNAI  YAPE++ +NS +   IP+I++I +  L + F K++ +  S++  
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  360  EASLYGGSAVNIKSFLNIQNLTL  382
            ++ + G+ +++I+ FLNI++L L
Sbjct  360  NPVISGAISLSIQKFLNIEQLKL  382

7) xylR in NC_013315


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  248 bits (926),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 159/383 (42%), Positives = 280/383 (74%), Gaps = 2/383 (0%)

Query  23   LVTDKYTIREMNERLVLEQIIKNGPISRASIASTIGLNKATISAITKKLIDESLVHEIGI  82
            +++ KYTIRE NE  +L+QIIK+  ISRA ++   +LNKA++S+IT+KLI+++++ E  I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  83   GNSTHSGGRKPILLVFN-KCAGISLSMDIGYDYIFSSLSYLDGTIINSKKLTDIQVSKDN  141
            G++T+ G RKPI+L FN   +++ +++D+GY+YI ++L+ LDG  I+  +L D  V+K N
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  142  VIQLIDEIINSYNISKIDTPYKVIGLTLAIHGITCENKVLFTPYYNLNEIDLYSILSKKY  201
            V +LI+ ++N       +T Y ++G+T+A++G   +NK++ T+Y +L EI+L  +L++ Y
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  202  DFPIHIENEANLTALAENTFSTVHNsllslsihsgfgsgiiiNNKLYSGRNGMSGEIGHT  261
            +FP+ ++NEANL+AL+E TFS+  ++L S+S+HSG+G G++ N KL  G +G +G++GHT
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  262  IIMPNGKLCPCGNRGCLEQYCSEKKVFEQLSSLENIPKIDSDIVKQLYYEDNQNAKKVIH  321
            I+ PNG+ C CGN+GCLE+YCS + +++++S   N+ KI+SD+V  LY + + +  K+I+
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  322  EFCSYLTIAINNAITTYAPEIIYLNSQIISDIPEILQITKDMLVSSFNKGINIEISSLGS  381
            ++  YL+I++NNAI  YAPE++ +NS +   IP+I++I +  L + F K++ +  S++  
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  382  EASLYGGSAVNIKSFLNIQNLTL  404
            ++ + G+ +++I+ FLNI++L L
Sbjct  360  NPVISGAISLSIQKFLNIEQLKL  382

8) xylR in NC_013316


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  248 bits (926),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 159/383 (42%), Positives = 280/383 (74%), Gaps = 2/383 (0%)

Query  23   LVTDKYTIREMNERLVLEQIIKNGPISRASIASTIGLNKATISAITKKLIDESLVHEIGI  82
            +++ KYTIRE NE  +L+QIIK+  ISRA ++   +LNKA++S+IT+KLI+++++ E  I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  83   GNSTHSGGRKPILLVFN-KCAGISLSMDIGYDYIFSSLSYLDGTIINSKKLTDIQVSKDN  141
            G++T+ G RKPI+L FN   +++ +++D+GY+YI ++L+ LDG  I+  +L D  V+K N
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  142  VIQLIDEIINSYNISKIDTPYKVIGLTLAIHGITCENKVLFTPYYNLNEIDLYSILSKKY  201
            V +LI+ ++N       +T Y ++G+T+A++G   +NK++ T+Y +L EI+L  +L++ Y
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  202  DFPIHIENEANLTALAENTFSTVHNsllslsihsgfgsgiiiNNKLYSGRNGMSGEIGHT  261
            +FP+ ++NEANL+AL+E TFS+  ++L S+S+HSG+G G++ N KL  G +G +G++GHT
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  262  IIMPNGKLCPCGNRGCLEQYCSEKKVFEQLSSLENIPKIDSDIVKQLYYEDNQNAKKVIH  321
            I+ PNG+ C CGN+GCLE+YCS + +++++S   N+ KI+SD+V  LY + + +  K+I+
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  322  EFCSYLTIAINNAITTYAPEIIYLNSQIISDIPEILQITKDMLVSSFNKGINIEISSLGS  381
            ++  YL+I++NNAI  YAPE++ +NS +   IP+I++I +  L + F K++ +  S++  
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  382  EASLYGGSAVNIKSFLNIQNLTL  404
            ++ + G+ +++I+ FLNI++L L
Sbjct  360  NPVISGAISLSIQKFLNIEQLKL  382

9) SSUJS14_1343 in NC_017618


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  243 bits (907),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 176/385 (46%), Positives = 276/385 (72%), Gaps = 3/385 (0%)

Query  1    MITDKYLIREQNEALVLQTIIENKGLSRAQIAKETGLNKASVSSITTSLIDSGLVEETGI  60
            MI+ KY IREQNEA +L+ II ++ +SRA+++K T+LNKASVSSIT  LI+ G++ E  I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GQSGKTGGRKPIFVNFCGKA-GLVIAFDLGYNYISGAISYLDGTIIRQFRERHL-LNREN  118
            G++ + G RKPI + F G + +LVIA+DLGYNYI GA++ LDG  I++ +  +  +N+ N
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  119  IIDYIEQYSKELLSAAPLTLHDVVGMTLAIHGIVVDNHIRFTPSYDLKDFPLKKELEKRF  178
            + D I++  ++L S  P T  ++VGMT+A++G V++N I  T+  DL ++ L   L++ +
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  179  YFPIYLENEANLSALGEFTFSQSRDNLisisihsgigagiiQDKRLQTGAYGQAGEIGHT  238
             FP++L+NEANLSALGE+TFS   +NL SIS+HSGIG G++++ +L+ G  G AG++GHT
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  239  ILHPKGKACNCGNLGCLEKYASNLVVYQEFSKHYNLKHANSDLISQYYLCSDSFTQELIN  298
            IL P+G+ C CGN GCLEKY S  V+Y+E+SK+ NL+  NSD++S  Y   +S    +I+
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  299  QQIYHQAIGINNLIMLCDPQLVIINSSLYAKIPKLLDKLESEINSQFAQKVSLTISNLGD  358
            Q  Y  +IG+NN IML  P+LVI+NS+L  KIP +++ ++ ++N+QF++ V +  S +  
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  359  TATLYGGIATAVQQFLHIPDLTFPR  383
             + + G+I+ ++Q+FL+I +L + +
Sbjct  360  NPVISGAISLSIQKFLNIEQLKLGK  384

10) NJAUSS_1274 in NC_020526


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  243 bits (907),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 176/385 (46%), Positives = 276/385 (72%), Gaps = 3/385 (0%)

Query  1    MITDKYLIREQNEALVLQTIIENKGLSRAQIAKETGLNKASVSSITTSLIDSGLVEETGI  60
            MI+ KY IREQNEA +L+ II ++ +SRA+++K T+LNKASVSSIT  LI+ G++ E  I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GQSGKTGGRKPIFVNFCGKA-GLVIAFDLGYNYISGAISYLDGTIIRQFRERHL-LNREN  118
            G++ + G RKPI + F G + +LVIA+DLGYNYI GA++ LDG  I++ +  +  +N+ N
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  119  IIDYIEQYSKELLSAAPLTLHDVVGMTLAIHGIVVDNHIRFTPSYDLKDFPLKKELEKRF  178
            + D I++  ++L S  P T  ++VGMT+A++G V++N I  T+  DL ++ L   L++ +
Sbjct  120  VQDLIHKVFNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEY  179

Query  179  YFPIYLENEANLSALGEFTFSQSRDNLisisihsgigagiiQDKRLQTGAYGQAGEIGHT  238
             FP++L+NEANLSALGE+TFS   +NL SIS+HSGIG G++++ +L+ G  G AG++GHT
Sbjct  180  NFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHT  239

Query  239  ILHPKGKACNCGNLGCLEKYASNLVVYQEFSKHYNLKHANSDLISQYYLCSDSFTQELIN  298
            IL P+G+ C CGN GCLEKY S  V+Y+E+SK+ NL+  NSD++S  Y   +S    +I+
Sbjct  240  ILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIE  299

Query  299  QQIYHQAIGINNLIMLCDPQLVIINSSLYAKIPKLLDKLESEINSQFAQKVSLTISNLGD  358
            Q  Y  +IG+NN IML  P+LVI+NS+L  KIP +++ ++ ++N+QF++ V +  S +  
Sbjct  300  QYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEW  359

Query  359  TATLYGGIATAVQQFLHIPDLTFPR  383
             + + G+I+ ++Q+FL+I +L + +
Sbjct  360  NPVISGAISLSIQKFLNIEQLKLGK  384

11) xylR2 in NC_015391


> AF454824|74|G74|21693333|AAM75280.1|Enterococcus_faecalis_MMH594|-|79196..80362|ef0076|-|EF0076
Length=388

 Score =  238 bits (887),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 161/382 (43%), Positives = 272/382 (72%), Gaps = 8/382 (2%)

Query  1    MIADKYTIREQNEAIVLTNIINNSEISRSAVSKSTGLNKASISEIVKKLINDQLINETGI  60
            MI+ KYTIREQNEA +L +II++ EISR+ +SK T+LNKAS+S I +KLIND +I E  I
Sbjct  1    MISSKYTIREQNEAQILNQIIKHREISRAELSKITSLNKASVSSITNKLINDGFIIEKRI  60

Query  61   GNASSAGGRKPIMLQLN-KHAGVSLGIDLGYDYIASMLTYLNGELVKEKRTTGTLITKen  119
            G+A++ G RKPIML +N   +++ ++IDLGY+YI + L+ L+G  +   +  +T + K N
Sbjct  61   GEATNRG-RKPIMLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKN  119

Query  120  vveiiediieSYTNLATELP---YKIIGVTIAIHGIVFENNILFTPYYNLDKIDLFKELS  176
            V ++I+ +   + +L+++ P   Y I+G+TIA++G V++N+I+ T+Y +L  I+L   L+
Sbjct  120  VQDLIHKV---FNQLTSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLN  176

Query  177  NIIDIPIHLENEANLTALAESTFSSKKNNLVSVSIHSGIGAGIVMNGSLYCGLNGRSGEI  236
            +  ++P+ L+NEANL+AL+E TFSS  +NL S+S+HSGIG G+V NG L  G +G +G++
Sbjct  177  QEYNFPVFLQNEANLSALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQL  236

Query  237  GHMTLYPHGLDCPCGNHGCFEQYCSEKSIVNQFRFLKNDPSLSIDDLVCSFEKNDEQSLT  296
            GH  L+P+G  C CGNHGC+E+YCS + I +++   KN   ++ D +   +++++ + + 
Sbjct  237  GHTILFPNGRKCTCGNHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVK  296

Query  297  LINKFTENLSIGINNLIATYGPEIIYINSSLTRKIPGILPTVNNRLVTSFNKNTPLYESR  356
            +I++++  LSIG+NN I  Y+PE++ +NS+LT+KIP+I+  ++  L   F K+  + +S 
Sbjct  297  MIEQYAYYLSIGVNNAIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSP  356

Query  357  LGIKASLFGATALAIKNFLKVE  378
            +  ++ + GA +L+I++FL++E
Sbjct  357  IEWNPVISGAISLSIQKFLNIE  378