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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AF232005

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) AvrB3
( YP_234311.2 )

type III effector protein AvrB3

NC_007005
(Pseudomonas syringae B728a)

1e-141

2) avrB4-1
( YP_275207.1 )

type III effector AvrB4-1

NC_005773
(Pseudomonas syringae 1448A)

1e-68

3) avrB4-2
( YP_273068.1 )

type III effector AvrB4-2

NC_005773
(Pseudomonas syringae 1448A)

3e-68

• Sequence Alignments

1) AvrB3 in NC_007005


> AF232005|8|G7|8037787|AAF71496.1|Pseudomonas_syringae_pv._syringae_B728a|-|7488..8459|-|-|unknown
Length=323

 Score =  495 bits (1867),  Expect = 1e-141, Method: Compositional matrix adjust.
 Identities = 322/323 (99%), Positives = 323/323 (100%), Gaps = 0/323 (0%)

Query  1    MGCVsskasvissdsFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVA  60
            MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVA
Sbjct  1    MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVA  60

Query  61   RWPNPHFNRDDAPHQMEYGESFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDA  120
            RWPNPHFNRDDAPHQMEYGESFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDA
Sbjct  61   RWPNPHFNRDDAPHQMEYGESFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDA  120

Query  121  RLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKMLDFLPHSNTFRFHGKIDGE  180
            RLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKM+DFLPHSNTFRFHGKIDGE
Sbjct  121  RLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKMMDFLPHSNTFRFHGKIDGE  180

Query  181  RLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKa  240
            RLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKA
Sbjct  181  RLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKA  240

Query  241  atdaalsdanalKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVP  300
            ATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVP
Sbjct  241  ATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVP  300

Query  301  DLEALTMPLKDFVKSYEGFFEHN  323
            DLEALTMPLKDFVKSYEGFFEHN
Sbjct  301  DLEALTMPLKDFVKSYEGFFEHN  323

2) avrB4-1 in NC_005773


> AF232005|8|G7|8037787|AAF71496.1|Pseudomonas_syringae_pv._syringae_B728a|-|7488..8459|-|-|unknown
Length=323

 Score =  252 bits (942),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 150/325 (47%), Positives = 233/325 (72%), Gaps = 5/325 (1%)

Query  1    MGCITSKP-LVSSPQWHNSATNSENLETGQRSHKASLYGAMSGSPERSELTWHQQSLVGV  59
            MGC++SK+ ++SS   + S TNS +  + ++  +++  G + G P+ S L   QQ+LVGV
Sbjct  1    MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQG-PQVSRLMPYQQALVGV  59

Query  60   ARWPDKEYNRDHVPLQMEYGRSFWNESRKIGSALANGEIQNFEDLWEKARDWRCSMANHD  119
            ARWP+ ++NRD+ P QMEYG SF + SR +G+++ANGEI+ F++LW  ARDWR S A +D
Sbjct  60   ARWPNPHFNRDDAPHQMEYGESFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQD  119

Query  120  ENIFKKPRNSYNEFPFTTPLINQYNYIKERYSARTDGSLQKLDDEGLLPPAKEFLITDKI  179
              +F  +R++ +  +F TP+   Y+++K+R++ R DG  +K+ D  +LP ++ F + +KI
Sbjct  120  ARLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKMMD--FLPHSNTFRFHGKI  177

Query  180  FGEPISLTKIVCSSDSSAHRDQRRYSDLWSRGL-DYGEPHYIQHTSSEEVPKILHHVNDL  238
             GE ++LT I  SSD  A+R +  Y  L+ +G+ D GEP+ + HT +E VPKI++HV++L
Sbjct  178  DGERLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHL  237

Query  239  FNEVLQSNLSTKKALKFLGEIHWWLAHAMPDERGSAAKSELCVRAIAQAKGLDLPPMKSG  298
            ++   ++ LS  +ALK L+EIHWW  +A+PD RGSAAK+ELCVR+IAQA+G+DLPPM+ G
Sbjct  238  YKAATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLG  297

Query  299  IVPDLEAMTMSREQFIKQYPSMFDD  323
            IVPDLEA+TM+  +F+K Y + F++
Sbjct  298  IVPDLEALTMPLKDFVKSYEGFFEH  322

3) avrB4-2 in NC_005773


> AF232005|8|G7|8037787|AAF71496.1|Pseudomonas_syringae_pv._syringae_B728a|-|7488..8459|-|-|unknown
Length=323

 Score =  251 bits (939),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 150/325 (47%), Positives = 232/325 (72%), Gaps = 5/325 (1%)

Query  1    MGCITSKP-LVSSPRWHNSATNSENLETGQRSHKASLYGAISGSPERSELTWHQQSLVGV  59
            MGC++SK+ ++SS   + S TNS +  + ++  +++  G + G P+ S L   QQ+LVGV
Sbjct  1    MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQG-PQVSRLMPYQQALVGV  59

Query  60   ARWPDKEYNRDHVPLQMEYGRSFWNESRKIGSALANGEIQNFEDLWEKARDWRCSMANHD  119
            ARWP+ ++NRD+ P QMEYG SF + SR +G+++ANGEI+ F++LW  ARDWR S A +D
Sbjct  60   ARWPNPHFNRDDAPHQMEYGESFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQD  119

Query  120  ENIFKKPRNSYNEFPFTTPLINQYNYIKERYSARTDGSLQKLDDEGLLPPAKEFLITDKI  179
              +F  +R++ +  +F TP+   Y+++K+R++ R DG  +K+ D  +LP ++ F + +KI
Sbjct  120  ARLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKMMD--FLPHSNTFRFHGKI  177

Query  180  FGEPISLTKIVCSSDSSAHRDQRRYSDLWSRGL-DYGEPHYIQHTSSEEVPKILHHVNDL  238
             GE ++LT I  SSD  A+R +  Y  L+ +G+ D GEP+ + HT +E VPKI++HV++L
Sbjct  178  DGERLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHL  237

Query  239  FDEVLQSNLSTKKALKFLGEIHWWLAHAMPDERGSAAKSELCVRAIAQAKGLDLPPMKSG  298
            +    ++ LS  +ALK L+EIHWW  +A+PD RGSAAK+ELCVR+IAQA+G+DLPPM+ G
Sbjct  238  YKAATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLG  297

Query  299  IVPDLEAMTMSREQFIKQYPSMFDD  323
            IVPDLEA+TM+  +F+K Y + F++
Sbjct  298  IVPDLEALTMPLKDFVKSYEGFFEH  322