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PAthogenisity Island DataBase (PAI DB)

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Homologs of HH0240 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0240
( NP_859771.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

1e-54

100

2) HCBAA847_1526
( YP_007601387.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

4e-42

3) HCBAA847_1527
( YP_007601388.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

1e-27

• Sequence Alignments

1) HH0240 in NC_004917


> NC_004917_P1|8|G8|32265739|NP_859771.1|Helicobacter_hepaticus_ATCC_51449|-|6647..7033|-|HH0240|hypothetical 
protein
Length=128

 Score =  205 bits (764),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)

Query  1    MQVENKKIAYWGGYRESENRFEFYLDNFDCKEDACPHYIQSLAQYKHYNVVLNKDYLLGP  60
            MQVENKKIAYWGGYRESENRFEFYLDNFDCKEDACPHYIQSLAQYKHYNVVLNKDYLLGP
Sbjct  1    MQVENKKIAYWGGYRESENRFEFYLDNFDCKEDACPHYIQSLAQYKHYNVVLNKDYLLGP  60

Query  61   DVSIWEFTINDLSCFWIWEADTWRSRVKIKDNPNHLKTLEKIMKDLCDVLNMLVEKGELE  120
            DVSIWEFTINDLSCFWIWEADTWRSRVKIKDNPNHLKTLEKIMKDLCDVLNMLVEKGELE
Sbjct  61   DVSIWEFTINDLSCFWIWEADTWRSRVKIKDNPNHLKTLEKIMKDLCDVLNMLVEKGELE  120

Query  121  STDDTSND  128
            STDDTSND
Sbjct  121  STDDTSND  128

2) HCBAA847_1526 in NC_020555


> NC_004917_P1|8|G8|32265739|NP_859771.1|Helicobacter_hepaticus_ATCC_51449|-|6647..7033|-|HH0240|hypothetical 
protein
Length=128

 Score =  164 bits (606),  Expect = 4e-42, Method: Compositional matrix adjust.
 Identities = 91/126 (73%), Positives = 111/126 (89%), Gaps = 2/126 (1%)

Query  1    MQTEKRKVTYWGGYREIEGRFEFYLDDFYCEEYVCPFCIKALAQYKHYNVVLNEDYLFGP  60
            MQ E++K++YWGGYRE E RFEFYLD+F C E  CP  I++LAQYKHYNVVLN DYL+GP
Sbjct  1    MQVENKKIAYWGGYRESENRFEFYLDNFDCKEDACPHYIQSLAQYKHYNVVLNKDYLLGP  60

Query  61   DVSIWDFTINDLSCFWIWETDTWRSRIKVNGNPSSLKRETLEKIMQDLCDMLNMLIENGE  120
            DVSIW+FTINDLSCFWIWE+DTWRSR+K+++NP+ LK  TLEKIM+DLCD+LNML+E+GE
Sbjct  61   DVSIWEFTINDLSCFWIWEADTWRSRVKIKDNPNHLK--TLEKIMKDLCDVLNMLVEKGE  118

Query  121  LASVQD  126
            L S +D
Sbjct  119  LESTDD  124

3) HCBAA847_1527 in NC_020555


> NC_004917_P1|8|G8|32265739|NP_859771.1|Helicobacter_hepaticus_ATCC_51449|-|6647..7033|-|HH0240|hypothetical 
protein
Length=128

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 77/129 (60%), Positives = 100/129 (78%), Gaps = 4/129 (3%)

Query  6    ETKRISYSKYLWKRVNHLDFTIENFYCEEEVCPFCIKALAQYKHYNVVLNEDYLLGPDVS  65
            E K+I+Y    +   N+++F ++NF C E+ CP  I++LAQYKHYNVVLN DYLLGPDVS
Sbjct  4    ENKKIAYWGGYRESENRFEFYLDNFDCKEDACPHYIQSLAQYKHYNVVLNKDYLLGPDVS  63

Query  66   IWNFTINDKPYVWIWDVITGENTIRAKFIENPDNTENKTLEKIMQDLCDVLNMLVEKGEI  125
            IW+FTIND +  WIW+  ++    R K+ +NP++   KTLEKIM+DLCDVLNMLVEKGE+
Sbjct  64   IWEFTINDLSCFWIWE--ADTWRSRVKIKDNPNHL--KTLEKIMKDLCDVLNMLVEKGEL  119

Query  126  ESTDDTSSD  134
            ESTDDTS+D
Sbjct  120  ESTDDTSND  128