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Homologs of unnamed gene of AJ617685

115

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECP_3049
( YP_670933.1 )

prepilin peptidase

NC_008253
(Escherichia coli 536)

8e-114

100

2) UMNK88_3720
( YP_006135419.1 )

type 4 prepilin-like proteins leader peptide-processing enzyme

NC_017641
(Escherichia coli UMNK88)

6e-113

3) pppA
( YP_006145505.1 )

bifunctional prepilin leader peptidase/ methylase

NC_017646
(Escherichia coli CE10)

1e-112

4) pppA
( YP_002409369.1 )

bifunctional prepilin leader peptidase and methylase

NC_011750
(Escherichia coli IAI39)

1e-112

5) pppA
( YP_006107364.1 )

bifunctional prepilin leader peptidase and methylase

NC_017631
(Escherichia coli ABU 83972)

2e-112

6) pppA
( YP_006155470.1 )

putative prepilin peptidase A

NC_017652
(Escherichia coli clone D i14)

2e-112

7) pppA
( YP_006150551.1 )

putative prepilin peptidase A

NC_017651
(Escherichia coli clone D i2)

2e-112

8) ECNA114_3048
( YP_006140161.1 )

prepilin peptidase

NC_017644
(Escherichia coli NA114)

2e-112

9) pppA
( YP_006170071.1 )

Putative prepilin peptidase A

NC_017663
(Escherichia coli P12b)

4e-112

10) pppA
( YP_002330722.1 )

bifunctional prepilin leader peptidase/methylase

NC_011601
(Escherichia coli E2348/69)

5e-112

11) EcDH1_0724
( YP_006090697.1 )

acid phosphatase

NC_017625
(Escherichia coli DH1)

5e-112

12) ECBD_0766
( YP_003035020.1 )

prepilin peptidase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

5e-112

13) pppA
( YP_001731836.1 )

bifunctional prepilin leader peptidase and methylase

NC_010473
(Escherichia coli K-12)

5e-112

14) pppA
( YP_002927887.1 )

bifunctional prepilin leader peptidase/ methylase

NC_012759
(Escherichia coli K-12)

5e-112

15) pppA
( YP_491169.1 )

bifunctional prepilin leader peptidase/methylase

NC_007779
(Escherichia coli K-12)

5e-112

16) pppA
( NP_417446.4 )

bifunctional prepilin leader peptidase/ methylase

NC_000913
(Escherichia coli K12)

5e-112

17) ECSF_2796
( YP_003350786.1 )

prepilin peptidase

NC_013654
(Escherichia coli SE15)

6e-112

18) ECSE_3248
( YP_002294523.1 )

prepilin peptidase

NC_011415
(Escherichia coli SE11)

6e-112

19) ETEC_3240
( YP_006116781.1 )

type II secretion system leader peptidase

NC_017633
(Escherichia coli ETEC H10407)

1e-111

20) pppA
( YP_003236129.1 )

bifunctional prepilin leader peptidase/methylase

NC_013364
(Escherichia coli 11128)

1e-111

21) EKO11_0749
( YP_005276463.1 )

peptidase A24A domain-containing protein

NC_016902
(Escherichia coli KO11FL)

1e-111

22) pppA
( YP_006163903.1 )

bifunctional prepilin leader peptidase/methylase

NC_017660
(Escherichia coli KO11FL)

1e-111

23) LY180_15360
( YP_008566136.1 )

peptidase A24

NC_022364
(Escherichia coli LY180)

1e-111

24) pppA
( YP_006125854.1 )

type II secretion system leader peptidase

NC_017635
(Escherichia coli W)

1e-111

25) pppA
( YP_006174598.1 )

bifunctional prepilin leader peptidase/methylase

NC_017664
(Escherichia coli W)

1e-111

26) EcE24377A_3430
( YP_001464427.1 )

type IV prepilin peptidase

NC_009801
(Escherichia coli E24377A)

2e-111

27) EcHS_A3141
( YP_001459759.1 )

type IV prepilin peptidase

NC_009800
(Escherichia coli HS)

6e-111

28) pppA
( YP_001745230.1 )

leader peptidase PppA

NC_010498
(Escherichia coli SMS-3-5)

2e-110

29) pppA
( YP_006130272.1 )

bifunctional prepilin leader peptidase/methylase

NC_017638
(Escherichia coli DH1)

3e-106

30) pppA
( YP_006097547.1 )

type II secretion system leader peptidase

NC_017626
(Escherichia coli 042)

5e-105

31) pppA
( YP_002414112.1 )

bifunctional prepilin leader peptidase and methylase

NC_011751
(Escherichia coli UMN026)

6e-105

32) pppA
( YP_003000554.1 )

prepilin peptidase

NC_012892
(Escherichia coli BL21(DE3))

1e-104

33) pppA
( YP_003055416.1 )

bifunctional prepilin leader peptidase/ methylase

NC_012971
(Escherichia coli BL21(DE3))

1e-104

34) pppA
( YP_003046027.1 )

bifunctional prepilin leader peptidase/ methylase

NC_012967
(Escherichia coli REL606)

1e-104

35) pppA
( YP_854416.1 )

prepilin peptidase A

NC_008563
(Escherichia coli APEC O1)

2e-104

36) ECOK1_3384
( YP_006102499.1 )

type IV prepilin peptidase family protein

NC_017628
(Escherichia coli IHE3034)

2e-104

37) pppA
( YP_002557822.1 )

Leader peptidase pppA

NC_011993
(Escherichia coli LF82)

2e-104

38) NRG857_14715
( YP_006121287.1 )

bifunctional prepilin leader peptidase and methylase

NC_017634
(Escherichia coli NRG 857C)

2e-104

39) pppA
( YP_008573043.1 )

Leader peptidase pppA

NC_022370
(Escherichia coli PMV-1)

2e-104

40) pppA
( YP_002392954.1 )

bifunctional prepilin leader peptidase and methylase

NC_011742
(Escherichia coli S88)

2e-104

41) UM146_01535
( YP_006109248.1 )

bifunctional prepilin leader peptidase and methylase

NC_017632
(Escherichia coli UM146)

2e-104

42) pppA
( YP_542366.1 )

prepilin peptidase A

NC_007946
(Escherichia coli UTI89)

2e-104

43) pppA
( YP_002384011.1 )

bifunctional prepilin leader peptidase and methylase

NC_011740
(Escherichia fergusonii ATCC 35469)

2e-104

44) pppA
( YP_002399470.1 )

bifunctional prepilin leader peptidase and methylase

NC_011745
(Escherichia coli ED1a)

4e-104

45) pppA
( YP_003501164.1 )

prepilin peptidase A

NC_013941
(Escherichia coli CB9615)

4e-104

46) ECO55CA74_17570
( YP_006160630.1 )

prepilin peptidase A

NC_017656
(Escherichia coli RM12579)

5e-104

47) O3M_04135
( YP_006768506.1 )

bifunctional prepilin leader peptidase/methylase

NC_018650
(Escherichia coli 2009EL-2050)

8e-104

48) O3O_21555
( YP_006782613.1 )

bifunctional prepilin leader peptidase/methylase

NC_018661
(Escherichia coli 2009EL-2071)

8e-104

49) O3K_04100
( YP_006777550.1 )

bifunctional prepilin leader peptidase/methylase

NC_018658
(Escherichia coli 2011C-3493)

8e-104

50) pppA
( YP_002404343.1 )

bifunctional prepilin leader peptidase and methylase

NC_011748
(Escherichia coli 55989)

8e-104

51) pppA
( YP_002388452.1 )

bifunctional prepilin leader peptidase and methylase

NC_011741
(Escherichia coli IAI1)

8e-104

52) pilD
( YP_692332.1 )

leaderpeptidase and N-methyltransferase

NC_008260
(Alcanivorax borkumensis SK2)

2e-32

53) Mfla_2225
( YP_546333.1 )

type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A

NC_007947
(Methylobacillus flagellatus KT)

5e-31

54) pilD
( YP_002923248.1 )

PilD type IV pilus leader peptidase

NC_012751
(Candidatus Hamiltonella defensa T5A)

4e-28

55) Msip34_0509
( YP_003050284.1 )

prepilin peptidase

NC_012969
(Methylovorus glucosetrophus SIP3-4)

3e-27

56) pulO
( YP_004038951.1 )

prepilin peptidase

NC_014733
(Methylovorus sp. MP688)

6e-27

57) Csal_2176
( YP_574226.1 )

type 4 prepilin peptidase 1

NC_007963
(Chromohalobacter salexigens DSM 3043)

2e-26

58) pilD
( YP_005937670.1 )

type 4 prepilin peptidase PilD

NC_017532
(Pseudomonas stutzeri DSM 4166)

2e-25

59) Dsui_1318
( YP_005027559.1 )

prepilin signal peptidase PulO-like peptidase

NC_016616
(Dechlorosoma suillum PS)

1e-24

60) PSJM300_03955
( YP_006523227.1 )

type 4 prepilin peptidase PilD

NC_018177
(Pseudomonas stutzeri DSM 10701)

5e-24

61) M301_0527
( YP_003673488.1 )

Prepilin peptidase

NC_014207
(Methylotenera versatilis 301)

1e-23

62) pilD
( YP_006836924.1 )

Leader peptidase/N-methyltransferase

NC_018697
(Cycloclasticus sp. P1; MCCC 1A01040)

2e-23

63) CYCME_2267
( YP_008374938.1 )

Type II secretory pathway, prepilin signal peptidase PulO-related peptidase

NC_021917
(Cycloclasticus zancles 7-ME)

2e-23

64) pilD
( YP_001350499.1 )

type 4 prepilin peptidase PilD

NC_009656
(Pseudomonas aeruginosa PA7)

4e-23

65) pilD
( YP_005979328.1 )

type 4 prepilin peptidase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

8e-23

66) G655_23275
( YP_007711493.1 )

type 4 prepilin peptidase PilD

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-22

67) pilD
( YP_001171596.1 )

type 4 prepilin peptidase PilD

NC_009434
(Pseudomonas stutzeri A1501)

2e-22

68) PADK2_23590
( YP_006484683.1 )

type 4 prepilin peptidase PilD

NC_018080
(Pseudomonas aeruginosa DK2)

1e-22

69) pilD
( YP_002442492.1 )

type 4 prepilin peptidase PilD

NC_011770
(Pseudomonas aeruginosa LESB58)

1e-22

70) pilD
( YP_005977202.1 )

type 4 prepilin peptidase PilD

NC_017548
(Pseudomonas aeruginosa M18)

1e-22

71) pilD
( NP_253218.1 )

type 4 prepilin peptidase PilD

NC_002516
(Pseudomonas aeruginosa PAO1)

1e-22

72) pilD
( YP_792875.1 )

type 4 prepilin peptidase PilD

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

2e-22

73) M062_23830
( YP_008135163.1 )

N-methyltransferase

NC_021577
(Pseudomonas aeruginosa RP73)

3e-22

74) pilD
( YP_004713329.1 )

type 4 prepilin peptidase PilD

NC_015740
(Pseudomonas stutzeri ATCC 17588)

3e-22

75) Dd586_2825
( YP_003334370.1 )

Prepilin peptidase

NC_013592
(Dickeya dadantii Ech586)

4e-22

76) pilD
( YP_008002507.1 )

type 4 prepilin-like proteins leader peptide-processing enzyme PilD

NC_021237
(Pseudomonas fluorescens CHA0)

4e-22

77) PSEBR_a4828
( YP_004356251.1 )

type 4 prepilin-like protein

NC_015379
(Pseudomonas brassicacearum NFM421)

2e-21

78) pilD
( YP_005210384.1 )

protein PilD/XcpA

NC_016830
(Pseudomonas fluorescens F113)

4e-21

79) Psyr_0796
( YP_233892.1 )

prepilin peptidase

NC_007005
(Pseudomonas syringae B728a)

5e-21

80) pilD
( YP_610121.1 )

type IV pili prepilin peptidase PilD/XcpA

NC_008027
(Pseudomonas entomophila L48)

6e-21

81) Rfer_2904
( YP_524146.1 )

prepilin peptidase

NC_007908
(Rhodoferax ferrireducens T118)

7e-21

82) pilD
( YP_262361.1 )

type IV pilus prepilin peptidase PilD

NC_004129
(Pseudomonas protegens Pf-5)

2e-20

83) pilD
( YP_273100.1 )

type IV pilus prepilin peptidase PilD

NC_005773
(Pseudomonas syringae 1448A)

3e-20

84) pilD
( NP_790763.1 )

type IV pilus prepilin peptidase PilD

NC_004578
(Pseudomonas syringae DC3000)

4e-20

85) Pfl01_4822
( YP_350550.1 )

type 4 prepilin peptidase

NC_007492
(Pseudomonas fluorescens Pf0-1)

8e-20

86) Tint_0380
( YP_003642121.1 )

prepilin peptidase

NC_014153
(Thiomonas intermedia K12)

1e-19

87) pilD
( YP_003623030.1 )

Type 4 prepilin-like proteins leader peptide-processing enzyme (Protein secretion protein XCPA) (Protein pilD) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase]

NC_014145
(Thiomonas sp. 3As)

4e-19

88) pilD
( YP_002317817.1 )

type IV pilus prepilin peptidase PilD

NC_011586
(Acinetobacter baumannii AB0057)

1e-18

89) ABBFA_003210
( YP_002327091.1 )

Type 4 prepilin-like proteins leader peptide-processing enzyme

NC_011595
(Acinetobacter baumannii AB307-0294)

1e-18

90) pilD
( YP_001715207.1 )

type 4 prepilin-like proteins leader peptide processing enzyme

NC_010410
(Acinetobacter baumannii AYE)

1e-18

91) M621_05280
( YP_008157889.1 )

peptidase A24

NC_021659
(Serratia plymuthica S13)

1e-18

92) pilD
( YP_001708295.1 )

type 4 prepilin-like proteins leader peptide processing enzyme

NC_010400
(Acinetobacter baumannii SDF)

1e-18

93) Pat9b_5650
( YP_004118362.1 )

Prepilin peptidase

NC_014838
(Pantoea sp. At-9b)

1e-18

94) Dtpsy_0766
( YP_002552245.1 )

prepilin peptidase

NC_011992
(Acidovorax ebreus TPSY)

6e-18

95) pilD
( YP_004620038.1 )

type 4 prepilin s leader peptide processing enzyme

NC_015677
(Ramlibacter tataouinensis TTB310)

8e-18

96) ABK1_0370
( YP_005512942.1 )

pilD

NC_017162
(Acinetobacter baumannii 1656-2)

1e-17

97) ACICU_00343
( YP_001845002.1 )

Type II secretory pathway, prepilin signal peptidase PulO

NC_010611
(Acinetobacter baumannii ACICU)

1e-17

98) BJAB07104_00386
( YP_008207851.1 )

Type II secretory pathway, prepilin signal peptidase PulO-related peptidase

NC_021726
(Acinetobacter baumannii BJAB07104)

1e-17

99) BJAB0868_00390
( YP_008211716.1 )

Type II secretory pathway, prepilin signal peptidase PulO-related peptidase

NC_021729
(Acinetobacter baumannii BJAB0868)

1e-17

100) ABTJ_03447
( YP_006291305.1 )

prepilin signal peptidase PulO-like peptidase

NC_017847
(Acinetobacter baumannii MDR-TJ)

1e-17

101) ABZJ_00371
( YP_005524327.1 )

Type II secretory pathway, prepilin signal peptidase PulO

NC_017171
(Acinetobacter baumannii MDR-ZJ06)

1e-17

102) ABTW07_0373
( YP_005797269.1 )

Type II secretory pathway, prepilin signal peptidase PulO

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

1e-17

103) M3Q_587
( YP_006846911.1 )

Type II secretory pathway, prepilin signal peptidase PulO

NC_018706
(Acinetobacter baumannii TYTH-1)

1e-17

104) pppA
( YP_003041617.1 )

type 4 prepilin-like proteins leader peptide processing enzyme (pecti enzymes secretion protein outo)

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-17

105) HCH_05280
( YP_436379.1 )

type II secretory pathway prepilin signal peptidase PulO and related peptidase

NC_007645
(Hahella chejuensis KCTC 2396)

3e-17

106) Fraau_1172
( YP_005377313.1 )

prepilin signal peptidase PulO-like peptidase

NC_017033
(Frateuria aurantia DSM 6220)

6e-17

107) A225_1543
( YP_006497288.1 )

Leader peptidase (Prepilin peptidase)

NC_018106
(Klebsiella oxytoca E718)

1e-16

108) Ser39006_3455
( YP_008523837.1 )

Prepilin peptidase

NC_022268
(Serratia sp. ATCC 39006)

1e-16

109) Tola_0536
( YP_002891751.1 )

prepilin peptidase

NC_012691
(Tolumonas auensis DSM 9187)

2e-16

110) Desaf_1665
( YP_005051660.1 )

prepilin peptidase

NC_016629
(Desulfovibrio africanus Walvis Bay)

5e-16

111) RORB6_14435
( YP_007875120.1 )

Leader peptidase (Prepilin peptidase)

NC_021066
(Raoultella ornithinolytica B6)

1e-15

112) Dda3937_02425
( YP_003883923.1 )

prepilin peptidase

NC_014500
(Dickeya dadantii 3937)

1e-14

113) plu1733
( NP_929014.1 )

type 4 prepilin-like proteins leader peptide processing enzyme

NC_005126
(Photorhabdus luminescens TTO1)

5e-14

114) yst1O
( YP_001007734.1 )

type 4 prepilin-like proteins leader peptide processing enzyme

NC_008800
(Yersinia enterocolitica 8081)

3e-13

115) KOX_11255
( YP_005018216.1 )

pullulanase-specific type II secretion system type 4 prepilin peptidase

NC_016612
(Klebsiella oxytoca KCTC 1686)

1e-11

• Sequence Alignments

1) ECP_3049 in NC_008253


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  402 bits (1512),  Expect = 8e-114, Method: Compositional matrix adjust.
 Identities = 269/269 (100%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60
            MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

2) UMNK88_3720 in NC_017641


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  399 bits (1502),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 266/269 (99%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

3) pppA in NC_011750


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  398 bits (1498),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAGMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKINLA  60
            M+FDVFQQYPA+MP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKI+LA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

4) pppA in NC_017646


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  398 bits (1498),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAGMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKINLA  60
            M+FDVFQQYPA+MP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKI+LA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

5) pppA in NC_017631


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  397 bits (1494),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 263/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYSAGMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKINLA  60
            M+FDVFQQY+A+MP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKI+LA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

6) pppA in NC_017652


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  397 bits (1494),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 263/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYSAGMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKINLA  60
            M+FDVFQQY+A+MP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKI+LA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

7) pppA in NC_017651


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  397 bits (1494),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 263/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYSAGMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKINLA  60
            M+FDVFQQY+A+MP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKI+LA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

8) ECNA114_3048 in NC_017644


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  397 bits (1494),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 263/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYSAGMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKINLA  60
            M+FDVFQQY+A+MP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKI+LA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

9) pppA in NC_017663


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  397 bits (1493),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 262/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  42   MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLA  101
            M+FDVFQQYP+AMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  102  LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  161
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  162  PESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  221
            PESGWGLAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  222  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  281
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  282  ITKRGSTTLPFGPCLSLGGIATLYLQALF  310
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

10) pppA in NC_011601


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1490),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 266/269 (99%), Positives = 267/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQLKISLA  60
            M+FDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQ KISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

11) ECBD_0766 in NC_012947


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1490),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 262/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLA  60
            M+FDVFQQYP+AMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

12) pppA in NC_012759


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1490),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 262/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLA  60
            M+FDVFQQYP+AMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

13) EcDH1_0724 in NC_017625


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1490),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 262/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLA  60
            M+FDVFQQYP+AMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

14) pppA in NC_010473


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1490),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 262/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLA  60
            M+FDVFQQYP+AMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

15) pppA in NC_000913


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1490),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 262/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLA  60
            M+FDVFQQYP+AMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

16) pppA in NC_007779


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1490),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 262/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLA  60
            M+FDVFQQYP+AMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

17) ECSF_2796 in NC_013654


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1489),  Expect = 6e-112, Method: Compositional matrix adjust.
 Identities = 262/269 (98%), Positives = 267/269 (99%), Gaps = 0/269 (0%)

Query  1    MHFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMILSAWLITASIIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLI+AS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

18) ECSE_3248 in NC_011415


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  396 bits (1488),  Expect = 6e-112, Method: Compositional matrix adjust.
 Identities = 260/269 (97%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

19) ETEC_3240 in NC_017633


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  395 bits (1485),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 259/269 (97%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSVQSKISLA  60
            M+FDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGTTTLPFGPCLSLGGIATIYLQALF  269
            ITKRG+TTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

20) pppA in NC_017660


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  395 bits (1486),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 258/269 (96%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGVVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAG+VLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

21) EKO11_0749 in NC_016902


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  395 bits (1486),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 258/269 (96%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGVVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAG+VLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

22) LY180_15360 in NC_022364


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  395 bits (1486),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 258/269 (96%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGVVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAG+VLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

23) pppA in NC_013364


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  395 bits (1486),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 258/269 (96%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGVVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAG+VLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

24) pppA in NC_017635


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  395 bits (1486),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 258/269 (96%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGVVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAG+VLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

25) pppA in NC_017664


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  395 bits (1486),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 258/269 (96%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGVVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAG+VLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

26) EcE24377A_3430 in NC_009801


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  394 bits (1482),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 258/269 (96%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDRQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGVVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAG+VLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

27) EcHS_A3141 in NC_009800


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  392 bits (1476),  Expect = 6e-111, Method: Compositional matrix adjust.
 Identities = 258/269 (96%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLSAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGL AAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

28) pppA in NC_010498


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  391 bits (1470),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 256/269 (96%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLA  60
            M+FDVFQQYP+AMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLSAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAASVIDLD+QWLPDVFTQGVLWTGL AAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFIAFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFI+FYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

29) pppA in NC_017638


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  377 bits (1417),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 252/257 (99%), Positives = 257/257 (100%), Gaps = 0/257 (0%)

Query  1    MPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQT  60
            MPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEM+S+QSKISLALPRSHCPHCQQT
Sbjct  13   MPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLALPRSHCPHCQQT  72

Query  61   IRIRDNIPLFSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVWPESGWGLAVMIL  120
            IR+RDNIPL+SWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMIL
Sbjct  73   IRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMIL  132

Query  121  SAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLR  180
            SAWLIAASVIDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLR
Sbjct  133  SAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLR  192

Query  181  WIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFG  240
            WIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFG
Sbjct  193  WIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFG  252

Query  241  PCLSLGGIATLYLQALF  257
            PCLSLGGIATLYLQALF
Sbjct  253  PCLSLGGIATLYLQALF  269

30) pppA in NC_017626


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  373 bits (1401),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 265/269 (99%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

31) pppA in NC_011751


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  372 bits (1400),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 266/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60
            M+FDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTPLPFGPCLSLGGIATLYLQALF  269
            ITKRGST LPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

32) pppA in NC_012971


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1396),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 265/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

33) pppA in NC_012892


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1396),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 265/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

34) pppA in NC_012967


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1396),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 265/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

35) pppA in NC_008563


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1396),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  33   MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  92
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  93   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  152
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  153  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  212
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  213  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  272
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  273  ITKRGSTTLPFGPCLSLGGIATLYLQALF  301
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

36) ECOK1_3384 in NC_017628


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1394),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

37) pppA in NC_011993


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1394),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

38) NRG857_14715 in NC_017634


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1394),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

39) pppA in NC_022370


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1394),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

40) pppA in NC_011742


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1394),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

41) UM146_01535 in NC_017632


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1394),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

42) pppA in NC_007946


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1394),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 264/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

43) pppA in NC_011740


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  371 bits (1393),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 261/269 (98%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMIRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYPAAMP+LATVGGLIIGSFLNVVIWRYPIM+RQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDSVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQD+VTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWLAGIILRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRW+AGI+LRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

44) pppA in NC_011745


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  370 bits (1390),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 263/269 (98%), Positives = 267/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPAAMPILATAGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA  60
            M+FDVFQQYPAAMP+LAT GGLIIGSFLNVVIWRYPIMLRQQMAEFHGE PSTQSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWGLAVMilsawliaasiidldNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGWGLAVMILSAWLIAAS+IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

45) pppA in NC_013941


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  370 bits (1392),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 259/269 (97%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  43   MLFDVFQQYPVAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  102
            M+FDVFQQYP AMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  103  LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  162
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  163  PESGWALAVMilsawliaasiidldHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  222
            PESGW+LAVMILSAWLIAAS+IDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  223  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  282
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  283  ITKRGSTTLPFGPCLSLGGIATLYLQALF  311
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

46) ECO55CA74_17570 in NC_017656


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  370 bits (1389),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 259/269 (97%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPVAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYP AMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIR+RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMilsawliaasiidldHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAAS+IDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269
            ITKRGSTTLPFGPCLSLGGIATLYLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

47) pppA in NC_011748


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  369 bits (1386),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 259/269 (97%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPVAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYP AMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMilsawliaasiidldHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAAS+IDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

48) pppA in NC_011741


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  369 bits (1386),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 259/269 (97%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPVAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYP AMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMilsawliaasiidldHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAAS+IDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

49) O3M_04135 in NC_018650


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  369 bits (1386),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 259/269 (97%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPVAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYP AMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMilsawliaasiidldHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAAS+IDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

50) O3O_21555 in NC_018661


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  369 bits (1386),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 259/269 (97%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPVAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYP AMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMilsawliaasiidldHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAAS+IDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

51) O3K_04100 in NC_018658


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  369 bits (1386),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 259/269 (97%), Positives = 268/269 (99%), Gaps = 0/269 (0%)

Query  1    MLFDVFQQYPVAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA  60
            M+FDVFQQYP AMP+LATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPS+QSKISLA
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLA  60

Query  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPlvelltalafllaslVW  120
            LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW
Sbjct  61   LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW  120

Query  121  PESGWALAVMilsawliaasiidldHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180
            PESGW+LAVMILSAWLIAAS+IDLD+QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG
Sbjct  121  PESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG  180

Query  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV  240
            VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALG+WVG+LSLPNVALIASCCGLIYAV
Sbjct  181  VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

Query  241  ITKRGSTTLPFGPCLSLGGIATIYLQALF  269
            ITKRGSTTLPFGPCLSLGGIAT+YLQALF
Sbjct  241  ITKRGSTTLPFGPCLSLGGIATLYLQALF  269

52) M634_15005 in NC_021847


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 110/267 (42%), Positives = 177/267 (67%), Gaps = 11/267 (4%)

Query  2    EVFQYYPWLFVVFASIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIKPPQEVL  61
            +VFQ YP    V+A++ GLI+GSFLNVVI R P ++     R+    F    + + Q  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSMPRSSCQNCATPIRIRDNIPVISWLLLKGKCHHCHTAISPRYPLIELLTAACAGFVA  121
            +L++PRS C +C   IR+RDNIP++SWL+LKG+C++C++ IS RYPL+ELLTA    + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  YHFGFSYFTVALIFFTFVLIAATFIDLDTMLLPDQLTLPLTWAGIALALTEVSPVSLQDA  181
                 S   +A+++++  LIAA+ IDLD   LPD +T  + W+G+  A ++ SP++LQDA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAIAGYLCLWSVYWGFKLLTGKEGMGYGDFKLLAALGVWLGWQSLPMIILLSSVVGVI  241
            V G + G++ + S+ W   ++  KE++G GD  L+AALG W+G  SLP + L++S  G+I
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGLVQLRLQKQGIERAFPFGPYLAIAG  268
            ++++     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

53) vfu_A00869 in NC_016602


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 124/280 (45%), Positives = 191/280 (69%), Gaps = 18/280 (6%)

Query  2    DIFTFYPWLFPTLATLLGLIIGSFLNVVIYRLPKIMEREWRQDCAESFPEYHIEPP--QG  59
            D+F  YP   P LAT+ GLIIGSFLNVVI R P ++ ++         +E+H E P  Q+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ--------MAEFHGEMPSTQS  55

Query  60   VLTLSTPRSTCPHCDTPIRIIDNIPVLSWLLLRGKCSQCHAPISARYPLIESFTALCSLA  119
             ++L+ PRS CPHC+  IR+ DNIP+LSWL+L+G+C +C+A IS RYPL+E +TAL  L 
Sbjct  56   KISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLL  115

Query  120  IALQF-GFSWFAVALLFFSYVLIAATFIDFDTMLLPDQLTLPLMWGGIALALAGISPITL  178
             +L     +W ++A++++S  LIAA+ ID+D   LPD +T  ++W G+  A A  SP+TL
Sbjct  116  ASLVWPESGW-GLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTL  174

Query  179  QDAVIGAMAGYLALWSVYWLFKLLTGKEGMGYGDFKllaalgawlgwqqlPIIILMSSVV  238
            QDAV G + G++++ S+ W+  ++  KE++G GD  L+AALG+W+G   LP + L++S  
Sbjct  175  QDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCC  234

Query  239  GLVFGLIQLRLQKRGIDKAFPFGPYLAIAGWLSALYGQAI  278
            GL++++I     KRG   ++PFGP L+++G +++LY QA+
Sbjct  235  GLIYAVI----TKRG-STTLPFGPCLSLGG-IATLYLQAL  268

54) pilD in NC_008260


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  132 bits (484),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 104/255 (41%), Positives = 176/255 (70%), Gaps = 13/255 (5%)

Query  19   LCVVMGLLVGSFLNVVIHRLPLMMERSWKQEAREVL-ELPAEETDGIFNLATPRSRCPKC  77
            L  V GL++GSFLNVVI R P+M+    +Q+  E   E+P+ ++   ++LA PRS+CP C
Sbjct  16   LATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSK--ISLALPRSHCPHC  69

Query  78   GHAIRWYENIPVLSWLALRGKCRGCKTPISKRYPIIEIVSGILAGLCAWHFGYGPW-LAF  136
             ++IR  +NIP+LSWL L+G+CR+C++ ISKRYP++E+++++   L +     + W LA 
Sbjct  70   QQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAV  129

Query  137  TLFATWVLLAAAMIDADTTLLPDTLNYWLLWAGLLAAVTGVSPVSLNDAVIGAMMGYLSL  196
             ++++W L+AA++ID D   LPD +   +LW+GL+AA +  SP++L+DAV G ++G++++
Sbjct  130  MILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITF  188

Query  197  WSIYWLFKLITGKEGMGYGDFKLLAALGAWVGWQYLPVIILLSSIVGLVFAIAMMIFSGE  256
             S+ W+  ++  KE++G GD  L+AALG+WVG   LP + L++S  GL++A    +++  
Sbjct  189  YSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYA----VITKR  244

Query  257  RRAQIPFGPYLATAG  271
              + +PFGP L+ +G
Sbjct  245  GSTTLPFGPCLSLGG  259

55) Mfla_2225 in NC_007947


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  127 bits (466),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 114/278 (42%), Positives = 179/278 (65%), Gaps = 20/278 (7%)

Query  5    VFLDALRDNPALFITCSALLGLMVGSFLNVVIYRLPRMMELAWHAERLEAEGQPQTEQAR  64
            +F+D +++ PA     +++ GL++GSFLNVVI R P M+    + +  E +G+  + Q++
Sbjct  1    MFFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSK  56

Query  65   YNLITPRSRCPHCQHAITALENIPIISYMMLGGKCRQCKTAISPRYPLVELLTATLTGLA  124
             +L  PRS+CPHCQ++I   +NIP++S +ML G+CR+C++ IS RYPLVELLTA    LA
Sbjct  57   ISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLA  116

Query  125  S--WH---FGYSSLAVASWliifalialtfidlDTHLLPDDITLPLLWAGLLFN-LDHGF  178
            S  W     G + + +++W     LIA + IDLD + LPD +T  +LW+GL+    +++ 
Sbjct  117  SLVWPESGWGLAVMILSAW-----LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSP  171

Query  179  TDISSAVIGAAAGYLVLWSVYWLFKLITGKEGMGYGDFKLLAALGAWFGWQLLPAVILLS  238
              +  AV G   G++ + S+ W+  ++  KE++G GD  L+AALG+W G   LP V L++
Sbjct  172  LTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIA  231

Query  239  SVAGSIIGIGLIVLTKHGRETPIPFGPYLALGGIAALF  276
            S  G I +    V+TK+G  T +PFGP L+LGGIA+L+
Sbjct  232  SCCGLIYA----VITKRG-STTLPFGPCLSLGGIATLY  264

56) VPBB_2348 in NC_019955


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  126 bits (462),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 109/267 (41%), Positives = 178/267 (67%), Gaps = 11/267 (4%)

Query  2    EVLQYYPWLFVVFASIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIKPPQEVL  61
            +V+Q YP    V+A++ GLI+GSFLNVVI R P ++     R+    F    + + Q  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSVPRSSCQNCATPIRIRDNIPVISWLLLKGKCHHCHTAISPRYPLIELLTAACAGFVA  121
            +L++PRS C +C   IR+RDNIP++SWL+LKG+C++C++ IS RYPL+ELLTA    + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  YHFGFSYFTVALIFFTFVLIAATFIDLDTMLLPDQLTLPLTWAGIALALTEISPVSLQDA  181
                 S   +A+++++  LIAA+ IDLD   LPD +T  + W+G+  A ++ SP++LQDA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAIAGYLCLWSVYWGFKLLTGKEGMGYGDFKllaalgawlgwQSLPMIILLSSVVGVI  241
            V G + G++ + S+ W   ++  KE++G GD  L+AALG+W+G  SLP + L++S  G+I
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGLVQLRLQKQGIERAFPFGPYLAIAG  268
            ++++     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

57) M636_09325 in NC_021848


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 108/267 (41%), Positives = 178/267 (67%), Gaps = 11/267 (4%)

Query  2    EVLQYYPWLFVVFASIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIKPPQEVL  61
            +V+Q YP    V+A++ GLI+GSFLNVVI R P ++     R+    F    + + Q  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSVPRSSCQNCATPIRIRDNIPVISWLLLKGKCHHCHTVISPRYPLIELLTAACAGFVA  121
            +L++PRS C +C   IR+RDNIP++SWL+LKG+C++C++ IS RYPL+ELLTA    + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  YHFGFSYFTVALIFFTFVLIAATFIDLDTMLLPDQLTLPLTWAGIALALTEITPVSLQDA  181
                 S   +A+++++  LIAA+ IDLD   LPD +T  + W+G+  A ++ +P++LQDA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAIAGYLCLWSVYWGFKLLTGKEGMGYGDFKllaalgawlgwQSLPMIILLSSVVGVI  241
            V G + G++ + S+ W   ++  KE++G GD  L+AALG+W+G  SLP + L++S  G+I
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGLVQLRLQKQGIERAFPFGPYLAIAG  268
            ++++     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

58) PBPRA3203 in NC_006370


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  122 bits (447),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 151/221 (69%), Gaps = 16/221 (7%)

Query  2    ELFTYYPWLFPVFAAIFGLLIGSFLNVVIHRLPIMMERQWKADCIECFPEFDKENKQEKD  61
            ++F  YP   PV+A++ GL+IGSFLNVVI R PIM+ +Q         +EF+ E    + 
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ--------MAEFHGEMPSTQS  55

Query  62   NNSVATTPVFNLSVPRSRCPHCQHAITMWENIPVISWLVLKGKCSACGAKISARYPTIEL  121
            +        ++L++PRS+CPHCQ++I +++NIP++SWL+LKG+C  C AKIS RYP +EL
Sbjct  56   K--------ISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVEL  107

Query  122  LTAVMTTIISLMLPSSLWAVAVIFFSFALIALTFIDIDTMLLPDQITLPLMWAGIAAALV  181
            LTA+   + SL+ P S W++AV+++S  LIA + ID+D   LPD +T  ++W+G+ AA  
Sbjct  108  LTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWA  167

Query  182  GLSPVSLQDAIIGAMVGYlslwslfwsfKLITGKEGMGYGD  222
              SP++LQDA+ G +VG++++ SL W   ++  KE++G GD
Sbjct  168  QQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

59) M892_13730 in NC_022269


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  121 bits (444),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 112/267 (42%), Positives = 181/267 (68%), Gaps = 11/267 (4%)

Query  2    EVFQYYPWLFVVFATIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIEPPKETL  61
            +VFQ YP    V+AT+ GLI+GSFLNVVI R P ++     R+    F    + + +  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSVPRSSCQQCGTPIRIRDNIPVISWLLLKGKCHNCQAPISARYPLIELLTAFCSGFIA  121
            +L++PRS C +C   IR+RDNIP++SWL+LKG+C++CQA IS RYPL+ELLTA+   + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  FHFGFSYftvalvfftfvliaaTFIDLDTMLLPDQLTLPLMWAGIALALAGISPVSLQDS  181
            +    S   +A+++++  LIAA+ IDLD   LPD +T  ++W+G+  A A  SP++LQD+
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  IIGAMAGYLCLWSVYWLFKLLTGKEGMGYGDFKllaalgawlgwQSLPMIILLSSVVGVI  241
            + G + G++ + S+ W+  ++  KE++G GD  L+AALG+W+G  SLP + L++S  G+I
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGLIQLRLQKQGIEKAFPFGPYLAIAG  268
            +++I     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

60) VIBHAR_03471 in NC_009783


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  121 bits (444),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 112/267 (42%), Positives = 181/267 (68%), Gaps = 11/267 (4%)

Query  2    EVFQYYPWLFVVFATIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIEPPKETL  61
            +VFQ YP    V+AT+ GLI+GSFLNVVI R P ++     R+    F    + + +  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSVPRSSCQQCGTPIRIRDNIPVISWLLLKGKCHNCQAPISARYPLIELLTAFCSGFIA  121
            +L++PRS C +C   IR+RDNIP++SWL+LKG+C++CQA IS RYPL+ELLTA+   + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  FHFGFSYftvalvfftfvliaaTFIDLDTMLLPDQLTLPLMWAGIALALAGISPVSLQDS  181
            +    S   +A+++++  LIAA+ IDLD   LPD +T  ++W+G+  A A  SP++LQD+
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  IIGAMAGYLCLWSVYWLFKLLTGKEGMGYGDFKllaalgawlgwQSLPMIILLSSVVGVI  241
            + G + G++ + S+ W+  ++  KE++G GD  L+AALG+W+G  SLP + L++S  G+I
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGLIQLRLQKQGIEKAFPFGPYLAIAG  268
            +++I     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

61) pilD in NC_012751


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  118 bits (429),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 106/235 (46%), Positives = 159/235 (68%), Gaps = 4/235 (1%)

Query  29   NVVIYRYPKMLEHAWRLEAENELGIPSKKTERFDFILPPSHCIECQTPLRFYDKIPLLSW  88
            NVVI RYP ML    R +  +  G  +    ++ + LP SHC +CQ  +R  D+IPLLSW
Sbjct  29   NVVIWRYPIML----RQQMAEFHGEMPSTQSKISLALPRSHCPHCQQTIRVRDNIPLLSW  84

Query  89   LYLKGQCRFCRKKIGLRYPAVELFTGIAFTLPVIFWGLSFWSMAIMGCsvlliilslidv  148
            L LKG+CR C+ KI+ RYP VEL+T++AF L+ + W  S W++A+M  S  LI  S+ID+
Sbjct  85   LMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDL  144

Query  149  dHLWLPnslnyallwlgllvallgysplNLSQAVSGVMIGYFALWSLYWGFKFLSGREGL  208
            D+ WLP+ +  ++LW GL+ A    SPL L +AV+GV++G++++ SL W   ++  +E+L
Sbjct  145  DNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEAL  204

Query  209  GSGDFLLFGALGAWVGVQNLIYVALISSFSGILFTLLSGRTKDKIPFGIWLALGG  263
            G GD LLF+ALG+WVG  +L  VALI+S  G+++++++ R    +PFG  L+LGG
Sbjct  205  GMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGG  259

62) N175_12790 in NC_022223


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  117 bits (427),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 113/269 (43%), Positives = 185/269 (69%), Gaps = 15/269 (5%)

Query  2    EVFIYYPWLFPLFAALFGLIVGSFLNVVIYRLPKIMEREWRQECADCFPEYH--IAPPEG  59
            +VF  YP   P++A++ GLI+GSFLNVVI R P ++ ++         +E+H  +++ ++
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ--------MAEFHGEMPSTQS  55

Query  60   QLTLSVPRSSCPHCDTPIRIIDNIPLLSWLFLKGKCSRCQGPISARYPLIELLTASMSFV  119
            +++L++PRS CPHC+  IR+ DNIPLLSWL LKG+C  CQ+ IS RYPL+ELLTA   ++
Sbjct  56   KISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLL  115

Query  120  VASHFGFSYFSLALLFFTFVLIAATFIDFdtmllpdkltlpllwaglslslMHISPVSLQ  179
             +     S  +LA+++++  LIAA+ ID+D   LPD +T  +LW+GL  +  + SP++LQ
Sbjct  116  ASLVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQ  175

Query  180  DAVIGAIAGYLSLWSVYWLFKLVTGKEGMGYGDFKllaalgawlgwQYLPIIILMSSVVG  239
            DAV G + G++++ S+ W+  +V  KE++G GD  L+AALG+W+G   LP + L++S  G
Sbjct  176  DAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCG  235

Query  240  IVFGLIQLRLQKKGIDKAFPFGPYLAIAG  268
            +++++I     K+G   ++PFGP L+++G
Sbjct  236  LIYAVI----TKRG-STTLPFGPCLSLGG  259

63) VAA_00728 in NC_015633


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  117 bits (427),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 113/269 (43%), Positives = 185/269 (69%), Gaps = 15/269 (5%)

Query  2    EVFIYYPWLFPLFAALFGLIVGSFLNVVIYRLPKIMEREWRQECADCFPEYH--IAPPEG  59
            +VF  YP   P++A++ GLI+GSFLNVVI R P ++ ++         +E+H  +++ ++
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ--------MAEFHGEMPSTQS  55

Query  60   QLTLSVPRSSCPHCDTPIRIIDNIPLLSWLFLKGKCSRCQGPISARYPLIELLTASMSFV  119
            +++L++PRS CPHC+  IR+ DNIPLLSWL LKG+C  CQ+ IS RYPL+ELLTA   ++
Sbjct  56   KISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLL  115

Query  120  VASHFGFSYFSLALLFFTFVLIAATFIDFdtmllpdkltlpllwaglslslMHISPVSLQ  179
             +     S  +LA+++++  LIAA+ ID+D   LPD +T  +LW+GL  +  + SP++LQ
Sbjct  116  ASLVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQ  175

Query  180  DAVIGAIAGYLSLWSVYWLFKLVTGKEGMGYGDFKllaalgawlgwQYLPIIILMSSVVG  239
            DAV G + G++++ S+ W+  +V  KE++G GD  L+AALG+W+G   LP + L++S  G
Sbjct  176  DAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCG  235

Query  240  IVFGLIQLRLQKKGIDKAFPFGPYLAIAG  268
            +++++I     K+G   ++PFGP L+++G
Sbjct  236  LIYAVI----TKRG-STTLPFGPCLSLGG  259

64) N646_1619 in NC_022349


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  117 bits (426),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 112/267 (42%), Positives = 177/267 (67%), Gaps = 11/267 (4%)

Query  2    EVFQYYPWLFVVFATIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIEPPKEVL  61
            +VFQ YP    V+AT+ GLI+GSFLNVVI R P ++     R+    F    + + +  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSVPRSSCQKCATPIRIRDNIPVISWLLLKGKCHNCQATISARYPLIELLTAFCSGFIA  121
            +L++PRS C  C   IR+RDNIP++SWL+LKG+C++CQA IS RYPL+ELLTA+   + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  YYFGFSYftvallfftfiliaatfiDLDTMLLPDQLTLPLTWAGIALALVEISPVTLQDS  181
                 S   +A+++++  LIAA+ IDLD   LPD +T  + W+G+  A  + SP+TLQD+
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAIAGYLCLWSVYWGFKLLTGKEGMGYGDFKllaalgawlgwQSLPMIILLSSVVGIV  241
            V G + G++ + S+ W   ++  KE++G GD  L+AALG+W+G  SLP + L++S  G++
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGIIQLRLQKQGIEKAFPFGPYLAIAG  268
            +++I     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

65) VEA_002543 in NC_013456


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  116 bits (424),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 111/267 (42%), Positives = 177/267 (67%), Gaps = 11/267 (4%)

Query  2    EVFQYYPWLFVVFATIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIEPPKEVL  61
            +VFQ YP    V+AT+ GLI+GSFLNVVI R P ++     R+    F    + + +  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSVPRSSCQKCATPIRIRDNIPVISWLLLKGKCHNCQTAISARYPLIELLTAFCSGFVA  121
            +L++PRS C  C   IR+RDNIP++SWL+LKG+C++CQ+ IS RYPL+ELLTA+   + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  YHFGFSYftvallfftfiliaatfiDLDTMLLPDQLTLPLTWAGIALALVEISPVTLQDS  181
                 S   +A+++++  LIAA+ IDLD   LPD +T  + W+G+  A  + SP+TLQD+
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAIAGYLCLWSVYWGFKLLTGKEGMGYGDFKllaalgawlgwQSLPMIILLSSVVGIV  241
            V G + G++ + S+ W   ++  KE++G GD  L+AALG+W+G  SLP + L++S  G++
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGIIQLRLQKQGIEKAFPFGPYLAIAG  268
            +++I     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

66) VP2526 in NC_004603


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 110/267 (42%), Positives = 178/267 (67%), Gaps = 11/267 (4%)

Query  2    EVFQYYPWLFVVFASIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIKPPQEVL  61
            +VFQ YP    V+A++ GLI+GSFLNVVI R P ++     R+    F    + + Q  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSVPRSSCQNCATPIRIRDNIPVISWLLLKGKCHHCHTAISPRYPLIELLTAACAGFVA  121
            +L++PRS C +C   IR+RDNIP++SWL+LKG+C++C++ IS RYPL+ELLTA    + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  YHFGFSYftvalifftffliaatfiDLDTMLLPDQLTLPLTWAGIALALTEISPVSLQDA  181
                 S   +A+++++  LIAA+ IDLD   LPD +T  + W+G+  A ++ SP++LQDA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAIAGYLCLWSVYWGFKLLTGKEGMGYGDFKllaalgawlgwQSLPMIILLSSVVGVI  241
            V G + G++ + S+ W   ++  KE++G GD  L+AALG+W+G  SLP + L++S  G+I
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGLVQLRLQKQGIERAFPFGPYLAIAG  268
            ++++     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

67) Msip34_0509 in NC_012969


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 116/281 (42%), Positives = 176/281 (63%), Gaps = 21/281 (7%)

Query  8    FLQVLQDSPAFFIAVSALLGLLVGSFLNVVIHRLPKMMEAEWRLNCQSLDGQTPSEPPKK  67
            F++V+Q+ PA    ++++ GL++GSFLNVVI R P M+    R +   ++G+ PS  +K 
Sbjct  2    FFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSK-  56

Query  68   FNLLTPRSSCPHCGHAITAIENIPLISYLGLRGKCRACKAPISLRYPAVELLTGILTALV  127
            ++L  PRS CPHC ++I   +NIPL+S L L+G+CR C+A IS RYP VELLT++   L 
Sbjct  57   ISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLA  116

Query  128  S--WK---LGYGGMTVFAWLFVFALIALTFIDLDTQLLPDDITlpllwlgllvnlyggFT  182
            S  W     G + M + AW     LIA + IDLD Q LPD +T  +LW GL+        
Sbjct  117  SLVWPESGWGLAVMILSAW-----LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSP  171

Query  183  -DLSSAVTGAAAGYLILWSIYWLFKLITGKEGMGYGDFKLLAAIGAWFGWQMLPAVILLS  241
              L  AVTG   G++ + S+ W+  ++  KE++G GD  L+AA+G+W G   LP V L++
Sbjct  172  LTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIA  231

Query  242  SLAGSVIGIGLILFARHGRSTPIPFGPYLALGGIAALFFGP  282
            S  G + ++    ++++G ST +PFGP L+LGGIA+L++ +
Sbjct  232  SCCGLIYAV----ITKRG-STTLPFGPCLSLGGIATLYLQA  267

68) pulO in NC_014733


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  114 bits (414),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 115/281 (41%), Positives = 175/281 (63%), Gaps = 21/281 (7%)

Query  8    FLQVLQDSPAFFIAVSALLGLLVGSFLNVVIHRLPKMMEAEWRLNCQSLDGQTPSEPPKK  67
            F++V+Q+ PA    ++++ GL++GSFLNVVI R P M+    R +   ++G+ PS  +K 
Sbjct  2    FFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSK-  56

Query  68   FNLLTPRSSCPHCGHAITAIENIPLISYLGLRGKCRACKAPISLRYPAVELLTGILTALV  127
            ++L  PRS CPHC ++I   +NIPL+S L L+G+CR C+A IS RYP VELLT++   L 
Sbjct  57   ISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLA  116

Query  128  S--WK---LGYGGMTVFAWLFVFALIALTFIDLDTQLLPDDITlpllwlgllvnlnggFT  182
            S  W     G + M + AW     LIA + IDLD Q LPD +T  +LW GL+        
Sbjct  117  SLVWPESGWGLAVMILSAW-----LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSP  171

Query  183  -DLSSAVGGAAAGYLILWSIYWLFKLITGKEGMGYGDFKLLAAIGAWFGWQMLPAVILLS  241
              L  AV G   G++ + S+ W+  ++  KE++G GD  L+AA+G+W G   LP V L++
Sbjct  172  LTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIA  231

Query  242  SLAGSVIGIGLILFARHGRSTPIPFGPYLALGGIAALFFGP  282
            S  G + ++    ++++G ST +PFGP L+LGGIA+L++ +
Sbjct  232  SCCGLIYAV----ITKRG-STTLPFGPCLSLGGIATLYLQA  267

69) pilD in NC_011753


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  113 bits (410),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 89/211 (43%), Positives = 148/211 (71%), Gaps = 6/211 (2%)

Query  2    EVFHYYPWLFPVLAFIFSLLIGSFLNVVIHRLPIMMEREWQQECSEYFSQYKIPAPEGKF  61
            +VF+ YP   PVLA + +L+IGSFLNVVI R PIM+    +Q+ +E+ ++  +P+ ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGE--MPSTQSKI  57

Query  62   NLSIPRSACPKCKTQLRIVDNVPVLSWLFLKGKCHSCANPISARYPLVELLTAILCTVVA  121
            +L++PRS CP C+  +R+ DN+P+LSWL LKG+C+ C   IS RYPLVELLTA+   + +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  SHFGFNYYaialifftfaliaatfiDLDTMLLPDQITLPLVWSGIALALFNISPVSLQDS  181
                 +  ++A+++++  LIAA+ IDLD   LPD +T  ++W+G+  A  + SP++LQD+
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VVGAMAGYLALWSVYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

70) VEJY3_13040 in NC_016613


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  112 bits (409),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 110/267 (42%), Positives = 176/267 (66%), Gaps = 11/267 (4%)

Query  2    EVFQYYPWLFVVFAVVFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYNIESPKEVL  61
            +VFQ YP    V+A V GLI+GSFLNVVI R P ++     R+    F   ++ S +  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHG-EMPSTQSKI  57

Query  62   TLSVPRSSCQQCGTPIRIRDNIPVISWLLLKGKCHNCSAPISARYPIVEILTAACSGYVA  121
            +L++PRS C +C   IR+RDNIP++SWL+LKG+C++C A IS RYP+VE+LTA      +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  FHFGFSYftialifftfilitatfiDLDTMLLPDQLTLPLTWAGIALALFEVSPVSLQDA  181
            +    S   +A+++++  LI+A+ IDLD   LPD +T  + W+G+  A  + SP++LQDA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAIAGYLCLWSVYWGFKLLTGKEGMGYGDFKllaalgawlgwqalPMIILLSSIVGVI  241
            V G + G++ + S+ W   ++  KE++G GD  L+AALG+W+G  +LP + L++S  G+I
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGIIQLRLQKKGIEKAFPFGPYLAIAG  268
            +++I     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

71) Csal_2176 in NC_007963


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  112 bits (407),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 109/270 (41%), Positives = 165/270 (62%), Gaps = 27/270 (10%)

Query  10   LAVMAFVVGTLLGSFLNVVIVRLPVMLMQQWRQEARESLALETEDVPAYNLCTPRSQCPR  69
            ++V+A V G ++GSFLNVVI R P+ML QQ   E +  ++     +   +L  PRS+CP+
Sbjct  13   MPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEMPSTQSKI---SLALPRSHCPH  68

Query  70   CRAPIAWHDNLPLIGWLKRRGRCAHCQGRISAQYPLVELAAGLLLFSVVMVHGATWSALA  129
            C+  I  +DN+PL++WL  +GRC +CQ++IS +YPLVEL ++L ++   +V    W+  +
Sbjct  69   CQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV----WPESG  124

Query  130  WG--GLCLT--LLVVAVIDLRTQLLPDIITLPLLWAGLIYQLVFQ-PYWLSNAVIGALAG  184
            WG   + L+  L+  +VIDL  Q LPD++T  +LW+GLI     Q P  L +AV G L G
Sbjct  125  WGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVG  184

Query  185  YLLLWGFYWLFKWITG----KEGMGYGDFKLLAALGAWFGWTMLPILLILSAGLGAVIGG  240
            ++    FY L +WI+G    KE++G GD  L+AALG+W G   LP     + +L A   G
Sbjct  185  FI---TFYSL-RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLP-----NVALIASCCG  235

Query  241  LLQLTHPRLRGMPLPFGPFLALAGWVAVLF  270
            L+     +  +  LPFGP L+L+G +A L+
Sbjct  236  LIYAVITKRGSTTLPFGPCLSLGG-IATLY  264

72) pilD in NC_017532


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 99/245 (41%), Positives = 152/245 (63%), Gaps = 15/245 (6%)

Query  28   FLNVVIHRLPIMMQSEWRMQAREYLEYPPEPIGERFNLLVPSSRCPHCGHRIRAWENIPL  87
            FLNVVI R PIM+    R Q  E+    P     +++L +P S+CPHC + IR ++NIPL
Sbjct  27   FLNVVIWRYPIML----RQQMAEFHGEMPST-QSKISLALPRSHCPHCQQTIRVRDNIPL  81

Query  88   VSWLALRGKCSSCQTPISCRYPLVE--LACGVLSGYVAWHFGFSWQAGAMLLLTWGLLAM  145
            +SWL L+G+C  CQ+ IS RYPLVE   A + L + + W    +W  + M+L +W L+A 
Sbjct  82   LSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSAW-LIAA  139

Query  146  SMIDVDHQllpdslvlpllWVGLIAN-SFALFASLEDALWGAIAGYLSLWSVYWLFKLIT  204
            S+ID+D+Q LPD +   +LW GLIA  +     +L+DA+ G + G++++ S+ W+  ++ 
Sbjct  140  SVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVL  199

Query  205  GKEGMGYGDFKLLAMLGAWGGWQVLPLTILLSSVVGAVLGSILLRVQRAESSTPIPFGPY  264
             KE++G GD  L+A LG+W G   LP   L++S  G + + I  R     +ST +PFGP 
Sbjct  200  RKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GSTTLPFGPC  254

Query  265  LAIAG  269
            L+++G
Sbjct  255  LSLGG  259

73) Dsui_1318 in NC_016616


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  106 bits (386),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 89/215 (42%), Positives = 142/215 (67%), Gaps = 5/215 (2%)

Query  9    PALASAVAGILGLLVGSFLNVVIHRLPRMMERDWHLQCAELRGETAPEKERLSLAAPASR  68
            PA  + +A + GL++GSFLNVVI R P M+ +    Q AE++GE ++ + ++SLA P S+
Sbjct  10   PAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ----QMAEFHGEMPSTQSKISLALPRSH  65

Query  69   CPHCGHAIRAWENIPVLSFLLLKGRCSGCQAPISLRYPLVEAFTGLLSAFTVWHFGPTla  128
            CPHC ++IR ++NIP+LS L+LKGRC +CQA IS RYPLVE +T+L   ++      +  
Sbjct  66   CPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGW  125

Query  129  aaaallllwamvalTGIDFDTQLLPDSITLPLLWLGLLFN-ISGTFTDISSAVIGAMVGY  187
            + A ++L   ++A + ID+D Q LPD +T  +LW GL+      +   +  AV G +VG+
Sbjct  126  GLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGF  185

Query  188  LSLWSVYWLFKLATGKEGMGYGDFKLLAAIGAWLG  222
            +++ S+ W+  +   KE++G GD  L+AA+G+W+G
Sbjct  186  ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG  220

74) O3Y_11620 in NC_016944


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 97/211 (46%), Positives = 144/211 (69%), Gaps = 6/211 (2%)

Query  2    ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL  61
            ++F  YP   PVLAT+ GLI+GSFLNVVI R P ++ ++      A F    + + ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-----MAEFHG-EMPSTQSKI  57

Query  62   TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA  121
            +L+LPRS CPHCQ  IRV DNIPLLSWL L+G+C +C+A IS RYPL+ELLTAL  L+ +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  THFPFGVFAVALLFFSYVLIAATFIDFdtlllpdqltlpllwggialallgFSPVSLSDA  181
               P +  ++A++++S  LIAA+ ID+D   LPD +T  +LW G+  A    SP++L DA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

75) VCLMA_A2129 in NC_017270


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 96/211 (46%), Positives = 144/211 (69%), Gaps = 6/211 (2%)

Query  2    ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL  61
            ++F  YP   PVLAT+ GLI+GSFLNVVI R P ++ ++      A F    + + ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-----MAEFHG-EMPSTQSKI  57

Query  62   TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA  121
            +L+LPRS CPHCQ  IRV DNIPLLSWL L+G+C +C+A IS RYPL+ELLTAL  L+ +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  THFPFGVFAVALLFFTYVLIAATFIDFdtlllpdqltlpllwggialallgFSPVSLSDA  181
               P +  ++A+++++  LIAA+ ID+D   LPD +T  +LW G+  A    SP++L DA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

76) pilD in NC_012578


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 97/211 (46%), Positives = 144/211 (69%), Gaps = 6/211 (2%)

Query  2    ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL  61
            ++F  YP   PVLAT+ GLI+GSFLNVVI R P ++ ++      A F    + + ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-----MAEFHG-EMPSTQSKI  57

Query  62   TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA  121
            +L+LPRS CPHCQ  IRV DNIPLLSWL L+G+C +C+A IS RYPL+ELLTAL  L+ +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  THFPFGVFAVALLFFSYVLIAATFIDFdtlllpdqltlpllwggialallgFSPVSLSDA  181
               P +  ++A++++S  LIAA+ ID+D   LPD +T  +LW G+  A    SP++L DA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

77) VCD_001929 in NC_012668


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 97/211 (46%), Positives = 144/211 (69%), Gaps = 6/211 (2%)

Query  2    ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL  61
            ++F  YP   PVLAT+ GLI+GSFLNVVI R P ++ ++      A F    + + ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-----MAEFHG-EMPSTQSKI  57

Query  62   TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA  121
            +L+LPRS CPHCQ  IRV DNIPLLSWL L+G+C +C+A IS RYPL+ELLTAL  L+ +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  THFPFGVFAVALLFFSYVLIAATFIDFdtlllpdqltlpllwggialallgFSPVSLSDA  181
               P +  ++A++++S  LIAA+ ID+D   LPD +T  +LW G+  A    SP++L DA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

78) pilD in NC_016445


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 97/211 (46%), Positives = 144/211 (69%), Gaps = 6/211 (2%)

Query  2    ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL  61
            ++F  YP   PVLAT+ GLI+GSFLNVVI R P ++ ++      A F    + + ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-----MAEFHG-EMPSTQSKI  57

Query  62   TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA  121
            +L+LPRS CPHCQ  IRV DNIPLLSWL L+G+C +C+A IS RYPL+ELLTAL  L+ +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  THFPFGVFAVALLFFSYVLIAATFIDFdtlllpdqltlpllwggialallgFSPVSLSDA  181
               P +  ++A++++S  LIAA+ ID+D   LPD +T  +LW G+  A    SP++L DA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

79) VC2426 in NC_002505


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 97/211 (46%), Positives = 144/211 (69%), Gaps = 6/211 (2%)

Query  2    ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL  61
            ++F  YP   PVLAT+ GLI+GSFLNVVI R P ++ ++      A F    + + ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-----MAEFHG-EMPSTQSKI  57

Query  62   TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA  121
            +L+LPRS CPHCQ  IRV DNIPLLSWL L+G+C +C+A IS RYPL+ELLTAL  L+ +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  THFPFGVFAVALLFFSYVLIAATFIDFdtlllpdqltlpllwggialallgFSPVSLSDA  181
               P +  ++A++++S  LIAA+ ID+D   LPD +T  +LW G+  A    SP++L DA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

80) pilD in NC_012582


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 97/211 (46%), Positives = 144/211 (69%), Gaps = 6/211 (2%)

Query  2    ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL  61
            ++F  YP   PVLAT+ GLI+GSFLNVVI R P ++ ++      A F    + + ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-----MAEFHG-EMPSTQSKI  57

Query  62   TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA  121
            +L+LPRS CPHCQ  IRV DNIPLLSWL L+G+C +C+A IS RYPL+ELLTAL  L+ +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  THFPFGVFAVALLFFSYVLIAATFIDFdtlllpdqltlpllwggialallgFSPVSLSDA  181
               P +  ++A++++S  LIAA+ ID+D   LPD +T  +LW G+  A    SP++L DA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

81) pilD in NC_009457


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  105 bits (380),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 97/211 (46%), Positives = 144/211 (69%), Gaps = 6/211 (2%)

Query  2    ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL  61
            ++F  YP   PVLAT+ GLI+GSFLNVVI R P ++ ++      A F    + + ++K+
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQ-----MAEFHG-EMPSTQSKI  57

Query  62   TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA  121
            +L+LPRS CPHCQ  IRV DNIPLLSWL L+G+C +C+A IS RYPL+ELLTAL  L+ +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  THFPFGVFAVALLFFSYVLIAATFIDFdtlllpdqltlpllwggialallgFSPVSLSDA  181
               P +  ++A++++S  LIAA+ ID+D   LPD +T  +LW G+  A    SP++L DA
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGD  212
            V G + G++++ S+ W+  ++  KE++G GD
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

82) PSJM300_03955 in NC_018177


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  104 bits (378),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 102/247 (42%), Positives = 161/247 (66%), Gaps = 17/247 (6%)

Query  27   SFLNVVIHRLPIMMQRDWQSQAREFL-ELPAEPAGAAFNLFLPHSRCPHCDHQIRAWENI  85
            SFLNVVI R PIM+++    Q  EF  E+P+  +   ++L LP+S+CPHC++ IR ++NI
Sbjct  26   SFLNVVIWRYPIMLRQ----QMAEFHGEMPSTQS--KISLALPRSHCPHCQQTIRVRDNI  79

Query  86   PLISWLALRGKCSACKASISKRYPLVE--LACGLLSGYVAWHFGFSWQAGAMLLLTWGLL  143
            PL+SWL L+G+C  C+A ISKRYPLVE   A ++L + + W    +W  + M+L +W L+
Sbjct  80   PLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSAW-LI  137

Query  144  AMSMIDVDHQllpdslvlpllwlglIIN-SFGLFASLEDALWGAVVGYLALWSVYWLFKL  202
            A S+ID+D+Q LPD +   +LW GLI   +     +L+DA+ G +VG++++ S+ W+  +
Sbjct  138  AASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGI  197

Query  203  VTGKEGMGYGDFKLLAMLGAWGGWQVLPLTILLSSVVGAVLGTVMLRMQKAESGTPIPFG  262
            V  KE++G GD  L+A LG+W G   LP   L++S  G + + +  R     ++T +PFG
Sbjct  198  VLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GSTTLPFG  252

Query  263  PYLAIAG  269
            P L+++G
Sbjct  253  PCLSLGG  259

83) M301_0527 in NC_014207


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 109/267 (41%), Positives = 166/267 (63%), Gaps = 21/267 (7%)

Query  22   ISVIFGLMVGSFLNVVIHRLPKMMEREWHNNCLELQGKEITEATKYTLAHPRSACPKCGH  81
            ++ + GL++GSFLNVVI R P M+    +++  E++G   +  +K +LA PRS CP C +
Sbjct  16   LATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSKISLALPRSHCPHCQQ  71

Query  82   KITALENIPVISYllllKGKCSGCKTAISVRYPLIEALTGLLIGLVS--WK---FGYTSL  136
             I   +NIP++S L+L KG+C +C++ IS RYPL+E LT+L + L S  W     G + +
Sbjct  72   TIRVRDNIPLLSWLML-KGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVM  130

Query  137  TLFAWIFTFALIALTFIDFDTQLLPDDITlpllwlgllln-lnnGFTDLKSAVIGAMAGY  195
             L AW     LIA + ID+D Q LPD +T  +LW GL+    +++   L+ AV G + G+
Sbjct  131  ILSAW-----LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGF  185

Query  196  LILWSVYWAFKLVTGKEGMGYGDFKLLAALGAWFGWQLLPAVILLSSVLGAVIGISLIVF  255
            + + S+ W   +V  KE++G GD  L+AALG+W G   LP V L++S      G+   V+
Sbjct  186  ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIAS----CCGLIYAVI  241

Query  256  TKRGREIPMPFGPFLAIGGIAALFLGP  282
            TKRG    +PFGP L++GGIA+L+L +
Sbjct  242  TKRG-STTLPFGPCLSLGGIATLYLQA  267

84) VV2781 in NC_005139


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 110/269 (41%), Positives = 177/269 (66%), Gaps = 11/269 (4%)

Query  17   YMDALQYYPWLYIGLASLFGLLVGSFLNVVIYRLPKIMELEWRQECAESFPEYNItppte  76
            + D +Q YP     LA++ GL++GSFLNVVI R P ++    RQ+ AE F   ++ +   
Sbjct  2    FFDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAE-FHG-EMPSTQS  55

Query  77   tltlstprssCPSCHTPIRVRDNIPVFSWLALRGKCHHCQTKISARYPFVEALSAFLCGL  136
             ++L+ PRS CP C+  IRVRDNIP++SWL L+G+C++CQ+KIS RYP+VE L+A+   L
Sbjct  56   KISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLL  115

Query  137  VAWKFGYAPITVALIGFTLVLIAATFIDLDTMLLPDQLTLPLTWAGIALALLEISPVSLQ  196
             +     +   +A++ ++  LIAA+ IDLD   LPD +T  + W+G+  A  + SP++LQ
Sbjct  116  ASLVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQ  175

Query  197  DSVIGAMAGYLCLWSVYHLFRLLTGKEGMGYGDFKllaalgawlgwQYLPMIILLSSVVG  256
            D+V G + G++ + S+  +  ++  KE++G GD  L+AALG+W+G   LP + L++S  G
Sbjct  176  DAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCG  235

Query  257  LIFGLIQLRLQKQGIEMAFPFGPYLAIAG  285
            LI+++I     K+G   ++PFGP L+++G
Sbjct  236  LIYAVI----TKRG-STTLPFGPCLSLGG  259

85) pilD in NC_018697


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  102 bits (371),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 135/208 (65%), Gaps = 10/208 (4%)

Query  22   GLLVGSFLNVVAYRLPIMLQNAWRQECLAFLEQEDTNNPSPAAFNLSQPRSRCPSCQHPI  81
            GL++GSFLNVV  R PIML    RQ+   F   ++   ++ + ++L+ PRS+CP CQ+ I
Sbjct  21   GLIIGSFLNVVIWRYPIML----RQQMAEF---HGEMPSTQSKISLALPRSHCPHCQQTI  73

Query  82   SALENIPVLSYLFLQGRCKNCQQAISIRYPAVELITALLSLLIAVQF-GVSLQMCVALLF  140
               +NIP+LS L L+GRC++CQ  IS RYP VEL+TAL  LL ++     +  + V +L 
Sbjct  74   RVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILS  133

Query  141  TWALISLTLIDLDTQLLPDSITLPLLWFALSISLFEIF-ITPKTALIGALAGYLSLWSVF  199
            +W LI+ ++IDLD Q LPD +T  +LW +L  +  +   +T + A+ G L G++++ S+ 
Sbjct  134  AW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLR  192

Query  200  WLFKLITGKEGMGYGDFKLLAAIGALLG  227
            W+  ++  KE++G GD  L+AA+G+ +G
Sbjct  193  WIAGIVLRKEALGMGDVLLFAALGGWVG  220

86) CYCME_2267 in NC_021917


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  102 bits (371),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 135/208 (65%), Gaps = 10/208 (4%)

Query  22   GLLVGSFLNVVAYRLPIMLQNAWRQECLAFLEQEDTNNPSPAAFNLSQPRSRCPSCQHPI  81
            GL++GSFLNVV  R PIML    RQ+   F   ++   ++ + ++L+ PRS+CP CQ+ I
Sbjct  21   GLIIGSFLNVVIWRYPIML----RQQMAEF---HGEMPSTQSKISLALPRSHCPHCQQTI  73

Query  82   SALENIPVLSYLFLQGRCKNCQQAISIRYPAVELITALLSLLIAVQF-GVSLQMCVALLF  140
               +NIP+LS L L+GRC++CQ  IS RYP VEL+TAL  LL ++     +  + V +L 
Sbjct  74   RVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILS  133

Query  141  TWALISLTLIDLDTQLLPDSITLPLLWFALSISLFEIF-ITPKTALIGALAGYLSLWSVF  199
            +W LI+ ++IDLD Q LPD +T  +LW +L  +  +   +T + A+ G L G++++ S+ 
Sbjct  134  AW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLR  192

Query  200  WLFKLITGKEGMGYGDFKLLAAIGALLG  227
            W+  ++  KE++G GD  L+AA+G+ +G
Sbjct  193  WIAGIVLRKEALGMGDVLLFAALGGWVG  220

87) VVMO6_00524 in NC_014965


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  101 bits (367),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 110/267 (42%), Positives = 176/267 (66%), Gaps = 11/267 (4%)

Query  2    DALQYYPWLYIGLASLFGLLVGSFLNVVIYRLPKIMELEWRQECAESFPEYNItpptetl  61
            D +Q YP     LA++ GL++GSFLNVVI R P ++    RQ+ AE F   ++ +    +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAE-FHG-EMPSTQSKI  57

Query  62   tlstprssCPSCHTPIRVRDNIPVFSWLALRGKCHHCQTKISARYPFVEALSAFLCGLVA  121
            +L+ PRS CP C+  IRVRDNIP++SWL L+G+C++CQ+KIS RYP+VE L+A+   L +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  WKFGYAPITVALIGFTLVLIAATFIDLDTMLLPDQLTLPLTWAGIALALLEISPVSLQDS  181
                 +   +A++ ++  LIAA+ IDLD   LPD +T  + W+G+  A  + SP++LQD+
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VIGAMAGYLCLWSVYHLFRLLTGKEGMGYGDFKllaalgawlgwQYLPMIILLSSVVGLI  241
            V G + G++ + S+  +  ++  KE++G GD  L+AALG+W+G   LP + L++S  GLI
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGLIQLRLQKQGIEMAFPFGPYLAIAG  268
            +++I     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

88) pilD in NC_009656


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  101 bits (365),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 108/257 (43%), Positives = 161/257 (63%), Gaps = 19/257 (7%)

Query  18   AIVLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLQPEPDPAIYNLVLPNSSCPHCGH  77
            A V GL++GSFLNVV+ R P M+    + +  E  G  P  ++ I +L LP S CPHC +
Sbjct  17   ATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSKI-SLALPRSHCPHCQQ  71

Query  78   EIRPWENIPVLSYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGFTWQAGAM  135
             IR ++NIP+LS L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M
Sbjct  72   TIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVM  130

Query  136  LLLTWGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLDDALFGAVFGYLS  192
            +L +W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L+DA+ G + G+++
Sbjct  131  ILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFIT  187

Query  193  LWSVFWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQVLPLTILLSSLVGAILGVIMLRLRN  252
            + S+ W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R   
Sbjct  188  FYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR---  244

Query  253  AASGTPIPFGPYLAIAG  269
              ++T +PFGP L+++G
Sbjct  245  --GSTTLPFGPCLSLGG  259

89) VV1_1623 in NC_004459


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 111/267 (42%), Positives = 176/267 (66%), Gaps = 11/267 (4%)

Query  2    DALQYYPWLYIGLASLFGLLVGSFLNVVIYRLPKIMELEWRQECAESFPEYNItpptetl  61
            D +Q YP     LA++ GL++GSFLNVVI R P ++    RQ+ AE F   ++ +    +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAE-FHG-EMPSTQSKI  57

Query  62   tlstprssCPSCHTPIRVRDNIPVFSWLALRGKCHHCQTKISARYPFVEALSAFLCGLVA  121
            +L+ PRS CP C+  IRVRDNIP++SWL L+G+C++CQ+KIS RYP+VE L+A+   L +
Sbjct  58   SLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS  117

Query  122  WKFGYAPITVALIGFTLVLIAATFIDLDTMLLPDQLTLPLTWTGIALALLEISPVSLQDS  181
                 +   +A++ ++  LIAA+ IDLD   LPD +T  + WTG+  A  + SP++LQD+
Sbjct  118  LVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA  177

Query  182  VFGAMAGYLCLWSVYHLFRLLTGKEGMGYGDFKllaalgawlgwQYLPMIILLSSVVGLI  241
            V G + G++ + S+  +  ++  KE++G GD  L+AALG+W+G   LP + L++S  GLI
Sbjct  178  VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI  237

Query  242  FGLIQLRLQKQGIEMAFPFGPYLAIAG  268
            +++I     K+G   ++PFGP L+++G
Sbjct  238  YAVI----TKRG-STTLPFGPCLSLGG  259

90) pilD in NC_017549


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =  100 bits (362),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 161/253 (64%), Gaps = 19/253 (7%)

Query  22   GLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQANYNLVLPNSACPRCGHEIRP  81
            GL++GSFLNVV+ R P M+ ++  AE +  +     + Q++ +L LP S CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENIPLVSYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGFTWQAGAMLLLT  139
            ++NIPL+S L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M+L +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLDDALFGAVFGYLSLWSV  196
            W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L+DA+ G + G++++ S+
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSL  191

Query  197  FWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESG  256
             W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R     ++
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GS  246

Query  257  TPIPFGPYLAIAG  269
            T +PFGP L+++G
Sbjct  247  TTLPFGPCLSLGG  259

91) G655_23275 in NC_020912


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 99.4 bits (358),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 159/253 (63%), Gaps = 19/253 (7%)

Query  22   GLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRP  81
            GL++GSFLNVV+ R P M+ ++  AE +  +     + Q+  +L LP S CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENIPLASYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGVTWQAGAMLLLT  139
            ++NIPL S L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M+L +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLDDALFGAVFGYLSLWSV  196
            W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L+DA+ G + G++++ S+
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSL  191

Query  197  FWLFKLVTGKEGMGYGDFKLLAMLGAWGGWHILPLTILLSSLVGAILGVIMLRLRNAESG  256
             W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R     ++
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GS  246

Query  257  TPIPFGPYLAIAG  269
            T +PFGP L+++G
Sbjct  247  TTLPFGPCLSLGG  259

92) pilD in NC_009434


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 99.1 bits (357),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 152/245 (63%), Gaps = 15/245 (6%)

Query  28   FLNVVIYRVPIMMQREWRMQAREYLEYPPEPIGERFNLLVPSSRCPHCGHRIRAWENIPL  87
            FLNVVI R PIM+    R Q  E+    P     +++L +P S+CPHC + IR ++NIPL
Sbjct  27   FLNVVIWRYPIML----RQQMAEFHGEMPST-QSKISLALPRSHCPHCQQTIRVRDNIPL  81

Query  88   VSWLALRGKCSSCQAPISCRYPLVE--LACGVLSGYVAWHFGFSWQAGAMLLLTWGLLAM  145
            +SWL L+G+C  CQA IS RYPLVE   A + L + + W    +W  + M+L +W L+A 
Sbjct  82   LSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSAW-LIAA  139

Query  146  SMIDVDHQllpdslvlpllwlglIAN-SFALFASLEDALWGAIAGYLSLWSVYWLFKLVT  204
            S+ID+D+Q LPD +   +LW GLIA  +     +L+DA+ G + G++++ S+ W+  +V 
Sbjct  140  SVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVL  199

Query  205  GKEGMGYGDFKLLAMLGAWGGWQVLPLTILLSSVVGAVLGSILLRVQRAESSTPIPFGPY  264
             KE++G GD  L+A LG+W G   LP   L++S  G + + I  R     +ST +PFGP 
Sbjct  200  RKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GSTTLPFGPC  254

Query  265  LAIAG  269
            L+++G
Sbjct  255  LSLGG  259

93) PADK2_23590 in NC_018080


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 160/253 (64%), Gaps = 19/253 (7%)

Query  22   GLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRP  81
            GL++GSFLNVV+ R P M+ ++  AE +  +     + Q+  +L LP S CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENIPLVSYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGFTWQAGAMLLLT  139
            ++NIPL+S L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M+L +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLDDALFGAVFGYLSLWSV  196
            W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L+DA+ G + G++++ S+
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSL  191

Query  197  FWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESG  256
             W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R     ++
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GS  246

Query  257  TPIPFGPYLAIAG  269
            T +PFGP L+++G
Sbjct  247  TTLPFGPCLSLGG  259

94) pilD in NC_011770


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 160/253 (64%), Gaps = 19/253 (7%)

Query  22   GLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRP  81
            GL++GSFLNVV+ R P M+ ++  AE +  +     + Q+  +L LP S CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENIPLVSYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGFTWQAGAMLLLT  139
            ++NIPL+S L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M+L +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLDDALFGAVFGYLSLWSV  196
            W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L+DA+ G + G++++ S+
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSL  191

Query  197  FWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESG  256
             W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R     ++
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GS  246

Query  257  TPIPFGPYLAIAG  269
            T +PFGP L+++G
Sbjct  247  TTLPFGPCLSLGG  259

95) pilD in NC_017548


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 160/253 (64%), Gaps = 19/253 (7%)

Query  22   GLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRP  81
            GL++GSFLNVV+ R P M+ ++  AE +  +     + Q+  +L LP S CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENIPLVSYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGFTWQAGAMLLLT  139
            ++NIPL+S L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M+L +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLDDALFGAVFGYLSLWSV  196
            W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L+DA+ G + G++++ S+
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSL  191

Query  197  FWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESG  256
             W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R     ++
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GS  246

Query  257  TPIPFGPYLAIAG  269
            T +PFGP L+++G
Sbjct  247  TTLPFGPCLSLGG  259

96) pilD in NC_002516


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 160/253 (64%), Gaps = 19/253 (7%)

Query  22   GLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRP  81
            GL++GSFLNVV+ R P M+ ++  AE +  +     + Q+  +L LP S CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENIPLVSYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGFTWQAGAMLLLT  139
            ++NIPL+S L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M+L +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLDDALFGAVFGYLSLWSV  196
            W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L+DA+ G + G++++ S+
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSL  191

Query  197  FWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESG  256
             W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R     ++
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GS  246

Query  257  TPIPFGPYLAIAG  269
            T +PFGP L+++G
Sbjct  247  TTLPFGPCLSLGG  259

97) pilD in NC_008463


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 159/253 (63%), Gaps = 19/253 (7%)

Query  22   GLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRP  81
            GL++GSFLNVV+ R P M+ ++  AE +  +     + Q+  +L LP S CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENIPLVSYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGFTWQAGAMLLLT  139
            ++NIPL+S L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M+L +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLGDALFGAVFGYLSLWSV  196
            W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L DA+ G + G++++ S+
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSL  191

Query  197  FWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESG  256
             W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R     ++
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GS  246

Query  257  TPIPFGPYLAIAG  269
            T +PFGP L+++G
Sbjct  247  TTLPFGPCLSLGG  259

98) M062_23830 in NC_021577


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 98.6 bits (355),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 104/253 (42%), Positives = 159/253 (63%), Gaps = 19/253 (7%)

Query  22   GLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRP  81
            GL++GSFLNVV+ R P M+ ++  AE +  +     + Q+  +L LP S CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENIPLASYLALGGKCSSCKAAIGKRYPLVE--LATALLSGYVAWHFGFTWQAGAMLLLT  139
            ++NIPL S L L G+C  C+A I+KRYPLVE   A A+L + + W     W  + M+L +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdvlvlpllwlglI---ANHFGLFASLDDALFGAVFGYLSLWSV  196
            W L+A S+ID D+Q LPDV+   +LW GLI   A++  L  +L+DA+ G + G++++ S+
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSL  191

Query  197  FWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESG  256
             W+  +V  KE++G GD  L+A LG+W G   LP   L++S  G I +VI  R     ++
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GS  246

Query  257  TPIPFGPYLAIAG  269
            T +PFGP L+++G
Sbjct  247  TTLPFGPCLSLGG  259

99) pilD in NC_015740


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 101/247 (41%), Positives = 154/247 (63%), Gaps = 19/247 (7%)

Query  28   FLNVVIYRLPIMMQREWRMQAREYLEYPPEPIGERFNLLVPSSRCPHCGHRIRAWENIPL  87
            FLNVVI R PIM+    R Q  E+    P     +++L +P S+CPHC + IR ++NIPL
Sbjct  27   FLNVVIWRYPIML----RQQMAEFHGEMPST-QSKISLALPRSHCPHCQQTIRVRDNIPL  81

Query  88   VSWLALRGKCSSCQAPISCRYPLVE--LACGVLSGYVAWHFGFSWQAGAMLLLTWGVLAM  145
            +SWL L+G+C  CQA IS RYPLVE   A + L + + W    +W  + M+L +W ++A 
Sbjct  82   LSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSAW-LIAA  139

Query  146  SMIDVDHQllpdslvlpllwlglI---ANNFTLFASLEDALWGAIAGYLSLWSVYWLFKL  202
            S+ID+D+Q LPD +   +LW GLI   A++  L  +L+DA+ G + G++++ S+ W+  +
Sbjct  140  SVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPL--TLQDAVTGVLVGFITFYSLRWIAGI  197

Query  203  VTGKEGMGYGDFKLLAMLGAWGGWQVLPLTILLSSVVGAVLGSILLRVQRAESSTPIPFG  262
            V  KE++G GD  L+A LG+W G   LP   L++S  G + + I  R     +ST +PFG
Sbjct  198  VLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GSTTLPFG  252

Query  263  PYLAIAG  269
            P L+++G
Sbjct  253  PCLSLGG  259

100) Dd586_2825 in NC_013592


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 112/255 (44%), Positives = 167/255 (66%), Gaps = 11/255 (4%)

Query  25   IGSFLNVVIHRLPVMLERRWQQEARFHLGLPVGAPPSRYDLCWPPSSCPHCHQRLRVRDN  84
            IGSFLNVVI R P+ML   +QQ A FH  +P  +  S+  L  P S CPHC+Q +RVRDN
Sbjct  24   IGSFLNVVIWRYPIML---RQQMAEFHGEMP--STQSKISLALPRSHCPHCQQTIRVRDN  78

Query  85   IPVLSWLWLRGRAHCCGGEVSWRYPLIEllsggafllagllWQPGMALLGALLCISMLLA  144
            IP+LSWL L+GR + C + +S RYPL+ELL++ AFLLA+L+W  +   L+ ++  + L+A
Sbjct  79   IPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIA  138

Query  145  LAVIDARTQLLPDVMTLPLLWCGLLFN-LADTFVPLEQAVIGAMAGYLSLWLIYWGFRLL  203
             +VID   Q LPDV T  +LW GL+     ++ + L++AV G + G++++  + W   ++
Sbjct  139  ASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIV  198

Query  204  SGREALGYGDFKllaalgawlgwqalPNLVLIASLTGLVATLLWRRIRRINMQQPLAFGP  263
              +EALG GD  L+AALG+W+G  +LPN+ LIAS  GL+ +++ +R         L+FGP
Sbjct  199  LRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGST-----TLPFGP  253

Query  264  WLAVSGAIGLVLNVL  278
             L+++G   L L+ L
Sbjct  254  CLSLGGIATLYLQAL  268

101) pilD in NC_021237


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 95/224 (43%), Positives = 146/224 (66%), Gaps = 10/224 (4%)

Query  5    DALTLYPMAFVAAALVLGLIVGSFLNVLVWRLPKMLERDWRAQARDVLGLEPEPVTAPYN  64
            D +  YP A    A V GLI+GSFLNV++WR P ML    R Q  +  G E  +  +  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHG-EMPSTQSKIS  58

Query  65   LMLPRSQCPHCAQAIRPWENIPLLSYLWLRGRCAHCNSSISPRYPLTE--LACGLISGFI  122
            L LPRS+CPHC Q+IR ++NIPLLS L L+GRC +C++ IS RYPL E   A +++ + +
Sbjct  59   LALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASL  118

Query  123  AWHFGFGWAAGLMLILSWGLLAMSLIDADHQllpdvlvlpllwlglIAN-SFGLLISLED  181
             W    GW+ ++M++ +W L+A S+ID D+Q LPDV+   +LW GLIA  +    ++L+D
Sbjct  119  VWP-ESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQD  176

Query  182  ALWGTVIGYLFLWSVFWLFKLLTGKEGMGHGDFKLLALFGAWGG  225
            A+ G ++G++ + S+ W+  ++  KE++G GD  L+A +G+W G
Sbjct  177  AVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG  220

102) PSEBR_a4828 in NC_015379


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 101/249 (41%), Positives = 158/249 (64%), Gaps = 15/249 (6%)

Query  24   IIGSFLNVLVWRLPKMLNREWRLQAHDLLGLPAETPGPVYNLMLPHSQCPHCGHRIRAWE  83
            IIGSFLNV++WR P ML    R Q  ++ G  + T + + +L LP+S+CPHC + IR ++
Sbjct  23   IIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSKI-SLALPRSHCPHCQQTIRVRD  77

Query  84   NIPLLSYLILRGRCSSCAAPIGRRYPLTE--LACGALSAFVAWHFGFGWHAAMVMVLTWG  141
            NIPLLS L+L+GRC  C A I++RYPL E   A + L A + W    GW  A++++ +W 
Sbjct  78   NIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSAW-  135

Query  142  LLAMSLIDAEHQllpdtlvlpllwlglIIN-SFGLFVSLNQAMWGAVAGYLALWSVFWVF  200
            L+A S+ID ++Q LPD +   +LW GLI   +    ++L++A+ G + G++++ S+ W+ 
Sbjct  136  LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIA  195

Query  201  KLITGKEGMGYGDFKLLAMLGAWGGWQIlpltlllssllGAVIGAIVLRLRDAPGSTQIP  260
             ++  KE++G GD  L+A LG+W G   LP   L++S  G + + I  R     GST +P
Sbjct  196  GIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GSTTLP  250

Query  261  FGPYLAIAG  269
            FGP L+++G
Sbjct  251  FGPCLSLGG  259

103) pilD in NC_016830


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 94.7 bits (340),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 107/263 (41%), Positives = 168/263 (64%), Gaps = 15/263 (5%)

Query  3    YPLAFvlvaallgliigSFLNVLVWRLPKMLHREWRLQAHDLLGLPAETPGPVYNLMLPH  62
            YP A  ++A++ GLIIGSFLNV++WR P ML    R Q  ++ G  + T + + +L LP+
Sbjct  9    YPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSKI-SLALPR  63

Query  63   SQCPHCGHRIRAWENIPLLSYLMLRGRCSSCAAPIGRRYPLTE--LTCGALSAFVAWHFG  120
            S+CPHC + IR ++NIPLLS LML+GRC  C A I++RYPL E   + + L A + W   
Sbjct  64   SHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-E  122

Query  121  FGWHAAMVMVLTWGLLGMSLIDAEHQllpdtlvlpllwlglIIN-SFGLFVPLNQAMWGA  179
             GW  A++++ +W L++ S+ID ++Q LPD +   +LW GLI   +    + L++A+ G 
Sbjct  123  SGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGV  181

Query  180  VAGYLALWSVFWVFKLITGKEGMGYGDFKLLAMLGAWGGWQIlpltlllsslVGAVIGVI  239
            + G++++ S+ W+  ++  KE++G GD  L+A LG+W G   LP   L++S  G + +VI
Sbjct  182  LVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVI  241

Query  240  VLRLRDAPGSTQIPFGPYLAIAG  262
              R     GST +PFGP L+++G
Sbjct  242  TKR-----GSTTLPFGPCLSLGG  259

104) Psyr_0796 in NC_007005


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 104/251 (42%), Positives = 160/251 (64%), Gaps = 15/251 (5%)

Query  22   GLIIGSFLNVIVYRLPIMMERDWKAQSRELLGLPAEPDQPVFNLNRPRSSCPHCAHKIRP  81
            GLIIGSFLNV++ R PIM+    + Q  E+ G    + Q+ ++L  PRS CPHC + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIML----RQQMAEFHG-EMPSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENLPVISYLLLRGKCSQCKAPISKRYPLVE--LTCAVLSAYVAWHFGFGWQATAMLVLG  139
            ++N+P++S L+L+G+C +C+A ISKRYPLVE   + A L A + W    GW  + M++ +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdslvlpllwlglIVN-AFGLFTSLNDALWGAVAGYLALWSVFW  198
            W L+A S+ID D+Q LPD +   +LW GLI   A     +L+DA+ G + G++++ S+ W
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRW  193

Query  199  LFKLVTGKEGMGYGDFKLLAMLGAWGGWQVLPLTIllsslvgavlgvIMMRVRRVESGTP  258
            +  +V  KE++G GD  L+A LG+W G   LP   L++S  G + +VI  R     ++T 
Sbjct  194  IAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GSTT  248

Query  259  IPFGPYLAIAG  269
            +PFGP L+++G
Sbjct  249  LPFGPCLSLGG  259

105) pilD in NC_008027


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 106/255 (42%), Positives = 166/255 (66%), Gaps = 12/255 (4%)

Query  16   TLAAVLGLLVGSFLNVLAYRLPVMLERQWQREAQEVLGLPQAEYERFDLCLPASRCPHCQ  75
             LA+V GL++GSFLNV+  R P+ML    +++  E  G   +   ++ L LP S+CPHCQ
Sbjct  15   VLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSKISLALPRSHCPHCQ  70

Query  76   RPIRAWENIPVLSYLALRGRCSGCKARISARYPlvelatallsllvaWHFGPGVEALAVM  135
            + IR ++NIP+LS L L+GRC +C+A+IS RYPLVEL TAL  LL +     +  +LAVM
Sbjct  71   QTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVM  130

Query  136  LLT-WGLIGLSLIDAEHQllpdvlvlpllwlglvvN-AFGLLVPLADAVWGAVAGYLSLW  193
            +L+ W LI+ S+ID ++Q LPDV+   +LW GL+   A    + L DAV G + G++++ 
Sbjct  131  ILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFY  189

Query  194  AVYWVFKLVTGKEGMGFGDFKLLAMLGAWGGWQILPLTLMLASLVGALIGLALVRLKRTQ  253
            ++ W+  +V  KE++G GD  L+A LG+W G    +L+L   +L+++  GL    + +  
Sbjct  190  SLRWIAGIVLRKEALGMGDVLLFAALGGWVG----ALSLPNVALIASCCGLIYAVITKRG  245

Query  254  MGAALPFGPYLAIAG  268
             +++LPFGP L+++G
Sbjct  246  -STTLPFGPCLSLGG  259

106) Rfer_2904 in NC_007908


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 93.9 bits (337),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 101/252 (41%), Positives = 161/252 (64%), Gaps = 9/252 (3%)

Query  16   GLLIGSFLNVVIYRLPVMLEAQWKAECAEMTGKETTSAEKFNLAVPRSRCLKCDHQIQWY  75
            GL+IGSFLNVVI R P+ML    + + AE  G   ++  K++LA+PRS+C  C++ I+  
Sbjct  21   GLIIGSFLNVVIWRYPIML----RQQMAEFHGEMPSTQSKISLALPRSHCPHCQQTIRVR  76

Query  76   ENIPVFSYLFLRGKCSNCKAPISLRYPLVELATAALFVYCGWKWGATPTALVWCGFGATM  135
            +NIP++S L L+G+C +C+A IS RYPLVEL TA  F+  +  W  +  +L    ++A +
Sbjct  77   DNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWL  136

Query  136  LALGCidwdttllpdditlpllwAGLIAAALQWTPVALPEALWGAVAGYVSLWLVYWAFK  195
            +A + ID D   LPD +T  +LW+GLIAA  Q +P++L +A+ G + G++++  + W   
Sbjct  137  IAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAG  196

Query  196  LVTGKEGMGFGDFKLFAALGAWFGWQALVPIILMASVIGAVIGIAMKFSSGLREGGYIPF  255
            +V  KE++G GD  LFAALG+W G  +L  + L+AS  G + ++  K     R +  +PF
Sbjct  197  IVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITK-----RGSTTLPF  251

Query  256  GPFLVGAGLTAM  267
            GP L  +G++++
Sbjct  252  GPCLSLGGIATL  263

107) pilD in NC_004129


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 92.8 bits (333),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 145/224 (65%), Gaps = 10/224 (4%)

Query  5    DALTLYPMAFVAAALVLGLIVGSFLNVLVWRLPKMLERDWRAQARDVLGLGPEPVAAPYN  64
            D +  YP A    A V GLI+GSFLNV++WR P ML    R Q  +  G  P +  +  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHGEMP-STQSKIS  58

Query  65   LMLPHSQCPHCAQAIRPWENIPLLSYLWLRGCCAHCNSSISPRYPLTE--LACGLISGFI  122
            L LP+S+CPHC Q+IR ++NIPLLS L L+G C +C++ IS RYPL E   A +++ + +
Sbjct  59   LALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASL  118

Query  123  AWHFGFGWAAGLMLILSWGLLAMSLIDADHQllpdvlvlpllwlglIAN-SFGLLISLED  181
             W    GW+ ++M++ +W L+A S+ID D+Q LPDV+   +LW GLIA  +    ++L+D
Sbjct  119  VWP-ESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQD  176

Query  182  ALWGTVIGYLFLWSVFWLFKLLTGKEGMGHGDFKLLALFGAWGG  225
            A+ G ++G++ + S+ W+  ++  KE++G GD  L+A +G+W G
Sbjct  177  AVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVG  220

108) pilD in NC_005773


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 92.0 bits (330),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 103/251 (42%), Positives = 158/251 (63%), Gaps = 15/251 (5%)

Query  22   GLIIGSFLNVVVYRLPKMMERDWKAQSREMLGLPAEPDQPAFNLNRPRSSCPRCAHKIRP  81
            GLIIGSFLNVV+ R P M+ ++      EM      + Q+ ++L  PRS CP+C + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQMAEFHGEM-----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENLPVISYLLLRGKCSQCKAPISKRYPLVE--LTCAVLSAYIAWHFGFGWQAAAMLVLS  139
            ++N+P++S L+L+G+C +C+A ISKRYPLVE   + A L A + W    GW  A M++ +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdslvlpllwlglIVN-AFGLFTSLNDALWGAVAGYLALWSVFW  198
            W L+A S+ID D+Q LPD +   +LW GLI   A     +L+DA+ G + G++++ S+ W
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRW  193

Query  199  LFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTIllsslvgavlgvIMMRVRRVESGTP  258
            +  +V  KE++G GD  L+A LG+W G   LP   L++S  G + +VI  R     ++T 
Sbjct  194  IAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GSTT  248

Query  259  IPFGPYLAIAG  269
            +PFGP L+++G
Sbjct  249  LPFGPCLSLGG  259

109) pilD in NC_004578


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 103/251 (42%), Positives = 158/251 (63%), Gaps = 15/251 (5%)

Query  22   GLIVGSFLNVVVYRLPKMMERDWKVQSREMLGLPAEPDQPVFNLILPHSSCPHCAHKIRP  81
            GLI+GSFLNVV+ R P M+ ++      EM      + Q+ ++L LP+S CPHC + IR 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQMAEFHGEM-----PSTQSKISLALPRSHCPHCQQTIRV  75

Query  82   WENLPVISYLLLRGKCSQCKAPISKRYPVVE--LTCAVLSAYVAWHFGFGWQAAAMLVLS  139
            ++N+P++S L+L+G+C +C+A ISKRYP+VE   + A L A + W    GW  A M++ +
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWP-ESGWGLAVMILSA  134

Query  140  WGLLAMSLIDADHQllpdslvlpllwlglIVN-AFGLFTSLSDALWGAVAGYLTLWSVFW  198
            W L+A S+ID D+Q LPD +   +LW GLI   A     +L DA+ G + G++T+ S+ W
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRW  193

Query  199  LFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTIllsslvgavlgvIMMRVRRVESGTP  258
            +  +V  KE++G GD  L+A LG+W G   LP   L++S  G + +VI  R     ++T 
Sbjct  194  IAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKR-----GSTT  248

Query  259  IPFGPYLAIAG  269
            +PFGP L+++G
Sbjct  249  LPFGPCLSLGG  259

110) Pfl01_4822 in NC_007492


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 90.5 bits (324),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 86/212 (41%), Positives = 136/212 (65%), Gaps = 10/212 (4%)

Query  5    ELFSLYPLAFVFTALLLGLVVGSFLNVLIWRLPKMLEREWRQQAHDVLGLPGEAPLPTYN  64
            ++F  YP A    A + GL++GSFLNV+IWR P ML    RQQ  +  G    +  +  +
Sbjct  4    DVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIML----RQQMAEFHG-EMPSTQSKIS  58

Query  65   LMLPHSQCPHCGHRIRAWENIPVLSYVFLRGRCSSCSAPISKRYPLTE--LACGLLSAFI  122
            L LP+S+CPHC + IR ++NIP+LS + L+GRC  C A ISKRYPL E   A ++L A +
Sbjct  59   LALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASL  118

Query  123  AWHLGFGWPACLLIVLTWGLLAMSLIDTEHQllpdvlvlpllwlglIVN-SFELFVPLHD  181
             W  + GW   ++I+ +W L+A S+ID ++Q LPDV+   +LW GLI   + +  + L+D
Sbjct  119  VWPES-GWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQD  176

Query  182  ALWGAVLGYMALWSVFWLFKLITGKDGIGHGD  213
            A+ G ++G++++ S+ W+  ++  K+++G GD
Sbjct  177  AVTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

111) Tint_0380 in NC_014153


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 89.7 bits (321),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 93/227 (41%), Positives = 142/227 (63%), Gaps = 9/227 (3%)

Query  20   GLAVGSFLNVVIYRLPVMMERQWQADAHATLHPDAQTQAAERFDLIAPRSRCPSCGHQIL  79
            GL +GSFLNVVI R P+M+ +Q  A+ H+ + P +Q+    ++ L  PRS+CP C + I 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM-PSTQS----KISLALPRSHCPHCQQTIR  74

Query  80   WWENIPVLSYLFLRGRCSSCHAKISPRYPLVELITALLTAAVVVRWGASGDSLAYIVL-L  138
             ++NIP+LS L L+GRC  C+AKIS RYPLVEL+TAL      + W  SG +LA ++L  
Sbjct  75   VRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSA  134

Query  139  WALITLALIDFDTTLLPDSITlpll-wlgllwhawlhpEQLSSAVWGAAVGYLALWTVYQ  197
            W LI+ ++ID+D   LPD +T  +L    +   A   P  L  AV G  VG++++ ++  
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRW  193

Query  198  GFKLLTGKEGMGFGDFKLLAALGAWFGVAAllpiillssiCGAVIGI  244
               ++  KE++G GD  L+AALG+W G  +L  + L++S CG + ++
Sbjct  194  IAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

112) pilD in NC_014145


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 88.1 bits (315),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 141/227 (63%), Gaps = 9/227 (3%)

Query  20   GLAVGSFLNVVIYRLPVMMERQWQADAHATLHPDAQTQAAERFDLIAPRSRCPSCGHQIL  79
            GL +GSFLNVVI R P+M+ +Q  A+ H+ + P +Q+    ++ L  PRS+CP C + I 
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQ-MAEFHGEM-PSTQS----KISLALPRSHCPHCQQTIR  74

Query  80   WWENIPVLSYLFLRGRCSSCHTTISPRYPLVELITALLTAAVVVRWGASGDSLAYIVL-L  138
             ++NIP+LS L L+GRC  C++ IS RYPLVEL+TAL      + W  SG +LA ++L  
Sbjct  75   VRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSA  134

Query  139  WALITLALIDFDTTLLPDSITlpll-wlgllwhawlhpEQLSSAVWGAAVGYLALWTVYQ  197
            W LI+ ++ID+D   LPD +T  +L    +   A   P  L  AV G  VG++++ ++  
Sbjct  135  W-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRW  193

Query  198  GFKLLTGKEGMGFGDFKLLAALGAWFGVAAllpiillssiCGAVIGI  244
               ++  KE++G GD  L+AALG+W G  +L  + L++S CG + ++
Sbjct  194  IAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAV  240

113) pilD in NC_011586


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 86.5 bits (309),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 136/227 (60%), Gaps = 17/227 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + K++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   SKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVIV  127
            + P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLVLT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  ++L+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAWMGP  228
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W+G+
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGA  221

114) ABBFA_003210 in NC_011595


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 86.5 bits (309),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 136/227 (60%), Gaps = 17/227 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + K++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   SKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVIV  127
            + P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLVLT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  ++L+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAWMGP  228
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W+G+
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGA  221

115) pilD in NC_010410


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 86.5 bits (309),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 136/227 (60%), Gaps = 17/227 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + K++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   SKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVIV  127
            + P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLVLT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  ++L+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAWMGP  228
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W+G+
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGA  221

116) M621_05280 in NC_021659


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 86.5 bits (309),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 85/209 (41%), Positives = 129/209 (62%), Gaps = 9/209 (4%)

Query  15   LFSAVLSLCLGSFINVVIYRLPKMLEREEDERVNGRHPDV---FNFFLPASTCPHCLEKI  71
            ++++V +L +GSF+NVVI R P ML R++    +G  P     +++ LP S CPHC + I
Sbjct  15   VLATVGGLIIGSFLNVVIWRYPIML-RQQMAEFHGEMPSTQSKISLALPRSHCPHCQQTI  73

Query  72   KPYDNIPLLSWLILRGRCRHCREDISSRYPLVELVTMLAGISIACFIGVGIDWffmlalf  131
            +  DNIPLLSWL+L+GRCR+C+  IS RYPLVEL+T LA +  + ++    +W + + ++
Sbjct  74   RVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS-LVWPESGWGLAVMIL  132

Query  132  sl-llalsaIDVERQLLPDCltlsl--lwagllWHSIAQPQFLPAAVIGAVAGYLTLWLL  188
            S  L+A S ID++ Q LPD +T ++        W     P  L  AV G + G++T+  L
Sbjct  133  SAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQ-QSPLTLQDAVTGVLVGFITFYSL  191

Query  189  YWGFRLSTGREGLGYGDFKLLAALGAWGG  217
             W   +   +E+LG GD  L+AALG+W G
Sbjct  192  RWIAGIVLRKEALGMGDVLLFAALGGWVG  220

117) pilD in NC_010400


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 86.3 bits (308),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 135/227 (60%), Gaps = 17/227 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + K++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   SKPASSCPACQQPIRWYQNIPVISWLTLRGKCGHCQHPISIRYPAVELLTMLCSLVVVMV  127
            + P S CP CQQ IR  +NIP++SWL L+G+C +CQ  IS RYP VELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLVLT-WVLIALTFIDFDTQLLPDRFTLTLAALGLGIN-TFNIYTSPNSAI  185
               +   L  ++L+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAWMGP  228
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W+G+
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGA  221

118) Pat9b_5650 in NC_014838


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 86.3 bits (308),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 154/225 (69%), Gaps = 14/225 (6%)

Query  32   DSGLTLWFSPSHCPRCAHPLCWRDNIPLLSWLLLRGKCRHCQQPISIIYPLIELLMAVTS  91
            +S ++L ++ SHCP+C + +  RDNIPLLSWL+L+G+CR+CQ  IS  YPL+ELL A++ 
Sbjct  54   QSKISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAF  113

Query  92   lvlsqllpdsalllatlFFCGSLLVLSLIDIRHYLLPDAVTlpllwcglllhccAILPGS  151
            L+ S + P+S+  LA +++ + L+  S+ID+ +  LPD  T  +LW GL+       P +
Sbjct  114  LLASLVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLT  173

Query  152  LSDAVLGVAVGYVSLAVLAHAYHWLR----QQQGLGMGDAKLLAAIAAWTGWQALPNVLI  207
            L DAV GV VG++++  L    +W+     ++++LGMGD  L+AA+++W G  +LPNV +
Sbjct  174  LQDAVTGVLVGFITFYSL----RWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVAL  229

Query  208  IASSGGILFALISRNLWPQRVRQTIAFGPWLALAGI-SLFINSII  251
            IAS  G+++A+I++     R   T++FGP L+L+GI +L++++++
Sbjct  230  IASCCGLIYAVITK-----RGSTTLPFGPCLSLGGIATLYLQALF  269

119) Dtpsy_0766 in NC_011992


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 84.2 bits (300),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 107/264 (41%), Positives = 158/264 (60%), Gaps = 30/264 (11%)

Query  19   IGSFLNVVIHRLPRMMERQWAEECRQYGQDVGLLSSAALPEADNEPLSLSKPRSRCPSCG  78
            IGSFLNVVI R P M+ +Q AE              + +P +++  +SL+ PRS+CP C 
Sbjct  24   IGSFLNVVIWRYPIMLRQQMAE------------FHGEMPSTQSK-ISLALPRSHCPHCQ  70

Query  79   HAIRWYENIPVLSYLALRGRCAGCGTRISPRYPLVELATGALFYACALRW---GWSLTTA  135
            ++IR  +NIP+LS L L+GRC +C ++IS RYPLVEL T+  F   +L W   GW+L+  
Sbjct  71   QTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVM  130

Query  136  AWCGFSAALVTLACidwdttllpdditlpllwAGLLAAVLRWIEVQPV---DAVIGAAAG  192
                +SA L++ + ID D   LPD +T  +LW+GL+AA   W +  P+   DAV G   G
Sbjct  131  I---LSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAA---WAQQSPLTLQDAVTGVLVG  184

Query  193  YLSLWSVYWGFKLATGKEGMGYGDFKLFAALGAWFGWQALVPIILLASVIGAIVGIAMKL  252
            ++++ S+ W   +   KE++G GD  LFAALG+W G  +L  + L+AS  G I ++  K 
Sbjct  185  FITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITK-  243

Query  253  ASTLREGKYVPFGPFLVGGGMAAM  276
                R +  +PFGP L  GG+A++
Sbjct  244  ----RGSTTLPFGPCLSLGGIATL  263

120) pilD in NC_015677


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.6 bits (298),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 106/251 (43%), Positives = 159/251 (64%), Gaps = 17/251 (6%)

Query  21   SFLNVVIHRLPRIMERQWAAECAELNGQPVSATEPLDLMRPRSRCPHCGHAIRWWENIPV  80
            SFLNVVI R P IM RQ   + AE++G+  S+   + L  PRS+CPHC ++IR ++NIP+
Sbjct  26   SFLNVVIWRYP-IMLRQ---QMAEFHGEMPSTQSKISLALPRSHCPHCQQTIRVRDNIPL  81

Query  81   LSWLALRGKCSACRAPISLRYPLVELATAALFGYAVWRWGATasglawsgfaaallalal  140
            LSWL L+G+C  C+A IS RYPLVEL TA  F  A   W  ++ GLA   ++A L+A ++
Sbjct  82   LSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASV  141

Query  141  idwdttllpddltlpllWAGLIAAALRWSGVPLIDALWGAVGGYLSL----WLVYQGFKL  196
            ID D   LPD +T  +LW+GLIAA  + S + L DA+ G + G++++    W+      +
Sbjct  142  IDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIA----GI  197

Query  197  LTGKEGMGFGDFKLFAALGAWFGWQALVPMILMASVIGAVVGIALKLSSGLREGGYVPFG  256
            +  KE++G GD  LFAALG+W G  +L  + L+AS  G + ++  K     R +  +PFG
Sbjct  198  VLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITK-----RGSTTLPFG  252

Query  257  PFLAGAGLTAM  267
            P L+ +G++++
Sbjct  253  PCLSLGGIATL  263

121) ABK1_0370 in NC_017162


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 132/224 (59%), Gaps = 17/224 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHERLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + +++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   NKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMV  127
              P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLILT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  +IL+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAW  225
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW  218

122) ACICU_00343 in NC_010611


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 132/224 (59%), Gaps = 17/224 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHERLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + +++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   NKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMV  127
              P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLILT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  +IL+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAW  225
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW  218

123) BJAB07104_00386 in NC_021726


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 132/224 (59%), Gaps = 17/224 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHERLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + +++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   NKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMV  127
              P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLILT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  +IL+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAW  225
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW  218

124) BJAB0868_00390 in NC_021729


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 132/224 (59%), Gaps = 17/224 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHERLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + +++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   NKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMV  127
              P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLILT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  +IL+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAW  225
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW  218

125) ABTJ_03447 in NC_017847


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 132/224 (59%), Gaps = 17/224 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHERLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + +++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   NKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMV  127
              P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLILT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  +IL+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAW  225
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW  218

126) ABZJ_00371 in NC_017171


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 132/224 (59%), Gaps = 17/224 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHERLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + +++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   NKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMV  127
              P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLILT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  +IL+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAW  225
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW  218

127) ABTW07_0373 in NC_017387


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 132/224 (59%), Gaps = 17/224 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHERLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + +++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   NKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMV  127
              P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLILT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  +IL+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAW  225
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW  218

128) M3Q_587 in NC_018706


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 132/224 (59%), Gaps = 17/224 (7%)

Query  8    FIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHERLTL  67
            F Q  +A+ +  ++ +L IGSFLNVVI R P M+ Q      QM     +    + +++L
Sbjct  6    FQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQ------QMAEFHGEMPSTQSKISL  59

Query  68   NKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMV  127
              P S CP CQQ IR  +NIP++SWL+L+G+C +CQ  IS RYP +ELLT L  L+  +V
Sbjct  60   ALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLV  119

Query  128  FGPTIQMLFGLILT-WVLIALTFIDFDTQLLPDRFTLPLAALGLGIN-TFNIYTSPNSAI  185
               +   L  +IL+ W LIA + ID+D Q LPD FT  +   GL    + +   + + A+
Sbjct  120  WPESGWGLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAV  178

Query  186  WGYLIGFLCLWIVYYLFKVITG----KEGMGYGDFKLLAALGAW  225
             G L+GF    I +Y ++ I+G    KE++G GD  L+AALG+W
Sbjct  179  TGVLVGF----ITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW  218

129) pppA in NC_012962


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 82.6 bits (294),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 82/191 (43%), Positives = 122/191 (64%), Gaps = 13/191 (6%)

Query  21   GLCVGSFLNVVICRLPIMI-------ISESNNETTGFNLCFPSSHCPRCGRVLAVRDNIP  73
            GL +GSFLNVVI R PIM+        +E  +  + ++L +P SHCP+C + + VRDNIP
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLALPRSHCPHCQQTIRVRDNIP  80

Query  74   LLSYLCRKGRCRYCNGMISLRYPLVEGTMAALFSLLALF---TGWHYsllglwglssmlV  130
            LLS L  KGRCR C++ IS RYPLVE   A  F L +L    +GW    L++  LS+ L+
Sbjct  81   LLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGW---GLAVMILSAWLI  137

Query  131  ALAVIDVEYMLLPDQltlsllwlgllfnlDSAGFVALPLAISGAVCGYLFFRLVEWIARQ  190
            A +VID++   LPD +T ++LW GL+      + ++L  A++G + G++ F  + WIA  
Sbjct  138  AASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGI  197

Query  191  LFQRDALGMGD  201
            +++++ALGMGD
Sbjct  198  VLRKEALGMGD  208

130) HCH_05280 in NC_007645


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 86/214 (41%), Positives = 133/214 (63%), Gaps = 11/214 (5%)

Query  5    FNQFNHNPALLYITVVVFGLIVGSFLNVVILRKPKMLEQEWRAQCAEIPGCDCPKTDEPL  64
            F+ F++ PA + +   V GLI+GSFLNVVI R P ML Q+     +E+P      + ++ 
Sbjct  3    FDVFQQYPAAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMP------STQSK  56

Query  65   ITLSKPDSTCPKCGHKIRAWENIPVISYLFLGGKCSSCKTGISIRYPLVEIATALLAVIV  124
            I+L+ P S CP C + IR ++NIP++S L L G+C  C++ IS RYPLVE+ TAL  ++ 
Sbjct  57   ISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLA  116

Query  125  VCYF-KMSWAGLAAIGLS-WTLLTLSLIDFdtqllpddltlpllWAGLLIN-IQGIFAPL  181
                   +W GLA + LS W L++ S+ID+D Q LPD +T  +LW+GL+    Q     L
Sbjct  117  SLVWPESGW-GLAVMILSAW-LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTL  174

Query  182  SEAVIGAVVGYLALWSVYHLFRLLTGKEGMGFGD  215
             +AV G +VG++++ S+  +  ++  KE++G GD
Sbjct  175  QDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

131) Fraau_1172 in NC_017033


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 81.0 bits (288),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 89/212 (42%), Positives = 138/212 (66%), Gaps = 13/212 (6%)

Query  17   GLIVGSFLNVVILRLP---RRMEAEWRQEAQRCLELPTDAELPPGIVRKASHCPHCQHPL  73
            GLI+GSFLNVVI R P   R+  AE + E       +T++ ++ ++ R  SHCPHCQ+ +
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQMAEFHGEMP-----STQSKISLALPR--SHCPHCQQTI  73

Query  74   GLRDNIPLLSWLMLRGRCRYCQAPISIQYPLVELAAALIGGITVFHTGANlhalaamglg  133
             +RDNIPLLSWLML+GRCR CQA IS +YPLVEL +AL   ++ +    +  +LA M L+
Sbjct  74   RVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILS  133

Query  134  walltlaVIDIRTQLLPDAITlpllwaglllslWPFGP--VPADAILGAAIGYLSLWSVY  191
              L++ +VID+  Q LPD +T   +    L++ W+  +     DA+ G  +G++++ S+ 
Sbjct  134  AWLIAASVIDLDNQWLPDVFT-QGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLR  192

Query  192  WLFRLLTGKEGMGHGDFKLLAALGAWMGPGAL  223
            W+  ++  KE++G GD  L+AALG+W+G+ +L
Sbjct  193  WIAGIVLRKEALGMGDVLLFAALGGWVGALSL  224

132) A225_1543 in NC_018106


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 80.2 bits (285),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 122/197 (62%), Gaps = 8/197 (4%)

Query  20   GATGAIVGSFLNVVICRLPVMLEKHWQREALLQLSLPSPEPTARFNLVLPHSRCPYCHTP  79
               G I+GSFLNVVI R P+ML     R+ + ++    P   ++++L LP+S+CP C+  
Sbjct  18   TVGGLIIGSFLNVVIWRYPIML-----RQQMAEFHGEMPSTQSKISLALPRSHCPHCQQT  72

Query  80   VAARDNIPLLSFLLLKGKARCCGAPISAQYPLVEAATAALFVLTARVFP-PGLALCGAWV  138
            +  RDNIPLLS L+LKG+ R C A IS +YPLVE  TA  F+L++ V P +G +L    +
Sbjct  73   IRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVM-I  131

Query  139  FVSFLLILAVIDYHRQllpdvltlpllWIGLLFN-LQSYFVSLPQATIGAVAGYlclwcl  197
            + + L+  +VID + Q LPDV+T  +LW GL+    Q   ++L +A  G + G++ +  L
Sbjct  132  LSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSL  191

Query  198  fwlfkllTGKDALGYGD  214
             W+  ++  K+ALG GD
Sbjct  192  RWIAGIVLRKEALGMGD  208

133) Ser39006_3455 in NC_022268


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 80.0 bits (284),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 111/260 (43%), Positives = 168/260 (65%), Gaps = 11/260 (4%)

Query  21   VCGLLIGSFLNVVIHRLPIMLERRWQQEACFHLGLAEPEPVSRYDLWWPPSTCPDCQQPL  80
            V GL+IGSFLNVVI R PIML   +QQ A FH  ++  +  S+  L  P S CP+CQQ +
Sbjct  19   VGGLIIGSFLNVVIWRYPIML---RQQMAEFHGEMPSTQ--SKISLALPRSHCPHCQQTI  73

Query  81   RFRDNVPVLSWLWLRGRSHCCLRPISWRYPLIEVCTALLFVLAGSWWAPglallgglvlf  140
            R RDN+P+LSWL L+GR + C   IS RYPL+E+ TAL F+LA+  W+ +   L+ ++L 
Sbjct  74   RVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILS  133

Query  141  cfllvlavIDIRTQWlpdvltlpll-wlgllfnlFETFVPLGQAVVGAMAGYLSLWLIYW  199
              L+  +VID+  QWLPDV+T  +L    +     ++ + L +AV G + G++++  + W
Sbjct  134  AWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRW  193

Query  200  LFKRFTGRDALGYGDFKFLAALGAWVGWSALPNlvliasslgllltllWRGARRQNIQQP  259
            +      ++ALG GD  ++AALG+WVG  +LPN+ LIAS  GL+ +++   ++R +    
Sbjct  194  IAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVI---TKRGS--TT  248

Query  260  LAFGPWLALGGGISLVLNAV  279
            L+FGP L+LGG  +L L+A+
Sbjct  249  LPFGPCLSLGGIATLYLQAL  268

134) Tola_0536 in NC_012691


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 78.9 bits (280),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 98/238 (42%), Positives = 150/238 (64%), Gaps = 13/238 (5%)

Query  31   RLPIMLERSWRQEYQDYFAEGDNPPAQTEPYNLFLPRSACPHCGHQITALENIPLLSWLF  90
            R PIML    RQ+  ++  +G+ P++Q+   +L LPRS CPHC + I   +NIPLLSWL 
Sbjct  34   RYPIML----RQQMAEF--HGEMPSTQSK-ISLALPRSHCPHCQQTIRVRDNIPLLSWLM  86

Query  91   LKGRCSSCQHPISARYPLVELLCALASVTVAFYYPPgwalagallltwillaltFIDFDK  150
            LKGRC  CQ  IS RYPLVELL ALA +  ++  P +    + ++L+  L+A + ID+D+
Sbjct  87   LKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDN  146

Query  151  lllpdqltlpllwvglllnlSHQF-VPLADAVIGAIAGYMVLWSIYWAFKLLTGKEGMGY  209
              LPD +T  +LW GL+   ++Q  + L DAV G + G++ + S+ W   ++  KE++G 
Sbjct  147  QWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGM  206

Query  210  GDFKllaalgawlgwQSLPLILILSSCVGAILGITLVVMRRHQQSKPMPFGPYLAIAG  267
            GD  L+AALG+W+G  SLP + +++SC G I ++        + S  +PFGP L+++G
Sbjct  207  GDVLLFAALGGWVGALSLPNVALIASCCGLIYAVI-----TKRGSTTLPFGPCLSLGG  259

135) Desaf_1665 in NC_016629


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 77.6 bits (275),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 106/263 (41%), Positives = 159/263 (61%), Gaps = 30/263 (11%)

Query  5    AAFPVLATLLGLILGSFYNVCIARY------------------ESGLSILRPRSHCPLCG  46
            AA PVLAT+ GLI+GSF NV I RY                  +S +S+  PRSHCP C 
Sbjct  11   AAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLALPRSHCPHCQ  70

Query  47   RTLGPLELVPVLSWLWQRGRCKGCGERISLKYPlvellsglwalllAIQF-GPGWEWLGH  105
            +T+   + +P+LSWL  +GRC++C  +IS +YPLVELL++L  LL ++    +GW  L+ 
Sbjct  71   QTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWG-LAV  129

Query  106  MILGGMLLVASGIDLDNFILPDRLTLSGFPLALGFA-VLRPDLALSDATWGAVAGAGAF-  163
            MIL++ L+ AS IDLDN  LPD +T + +  +L  A   ++ L+L DA  G + G  +F 
Sbjct  130  MILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFY  189

Query  164  KLIQVSYKFLRGVDGLGTGDVKLMLLIGAWLGWQLVPMAVLVGSVAALPVGILYALRSKR  223
             L  ++   LR  ++LG GDV L   +G+W+G   +P   L++S      G++YA+ +KR
Sbjct  190  SLRWIAGIVLRK-EALGMGDVLLFAALGGWVGALSLPNVALIASCC----GLIYAVITKR  244

Query  224  TGQPAIVPYGPFLSLGAMACVLY  246
             +  + +P+GP LSLG++A  LY
Sbjct  245  GS--TTLPFGPCLSLGGIA-TLY  264

136) RORB6_14435 in NC_021066


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 76.3 bits (270),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 154/242 (64%), Gaps = 17/242 (7%)

Query  31   NVVIYRLPLMMQQE----------ESARFNLCVPASFCPQCQRPIIWRDNIPLLSYLSLK  80
            NVVI R P+M++Q+            ++++L +P S CP+CQ+ I  RDNIPLLS L LK
Sbjct  29   NVVIWRYPIMLRQQMAEFHGEMPSTQSKISLALPRSHCPHCQQTIRVRDNIPLLSWLMLK  88

Query  81   GRARCCQAPISQRYPLTELASGLLFVlagylltpglpllgglillstllvlaiIDGqtql  140
            GR R CQA IS+RYPL EL ++L F+LA+ +   +   L+ +IL + L+  ++ID + Q 
Sbjct  89   GRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDNQW  148

Query  141  lpdrltlpllWAGLLFN-LNGTFVPLSEAVIGAMTGYLSLWTVYWLFRLLTGKEALGYGD  199
            LPD +T  +LW+GL+    + + + L +AV G + G++++ ++ W+  ++  KEALG GD
Sbjct  149  LPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGD  208

Query  200  FKLLAALGAWSGWQILPQTLLCASASGLIWTLLQRRITLQSLDQPLAFGPWLALAG-SGL  258
              L+AALG+W G   LP+  L AS  GLI +++ +R +       L+FGP L+L+G + L
Sbjct  209  VLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGS-----TTLPFGPCLSLGGIATL  263

Query  259  FL  260
            +L
Sbjct  264  YL  265

137) Dda3937_02425 in NC_014500


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 73.1 bits (258),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 110/258 (43%), Positives = 165/258 (64%), Gaps = 11/258 (4%)

Query  22   GLITGSFLNVVIHRLPLMLERRWQQEARFQLGQPAGAPSPRYDLCWPPSSCPHCHQRLRV  81
            GLI GSFLNVVI R P+ML   +QQ A F+   P+  +     L  P S CPHC+Q +RV
Sbjct  21   GLIIGSFLNVVIWRYPIML---RQQMAEFHGEMPSTQSKISLAL--PRSHCPHCQQTIRV  75

Query  82   RDNIPLLSWIGLRGRAHCCGGAVSWRYPliellsglsfllagllwqpglallgallcfgt  141
            RDNIPLLSW+ L+GR + C + +S RYPL+ELL++L+FLLA+L+W  +   L+ ++  + 
Sbjct  76   RDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAW  135

Query  142  llalaaIDARTQLLPDVMTlpll-wggllfnlADTFVPLEQAVVGAMAGYLSLWLIYWAF  200
            L+A + ID   Q LPDV T  +L  G +     ++ + L++AV G + G++++  + W  
Sbjct  136  LIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIA  195

Query  201  RLLSGREALGQGDFKllaalgawlgwqalPNLVLIASLTGLAATLLWRRVRRISMQQPLA  260
             ++  +EALG GD  L+AALG+W+G  +LPN+ LIAS  GL  +++ +R         L+
Sbjct  196  GIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGST-----TLP  250

Query  261  FGPWLAVGGAVSLVLNVL  278
            FGP L++GG  +L L+ L
Sbjct  251  FGPCLSLGGIATLYLQAL  268

138) plu1733 in NC_005126


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 71.0 bits (250),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 122/191 (64%), Gaps = 13/191 (6%)

Query  21   GLCVGSFLNVVICRLPMMI-------FSEINNEVASFNLCFPRSHCPRCSHVLAARDIIP  73
            GL +GSFLNVVI R P+M+        +E+ +  + ++L +PRSHCP+C + +  RD IP
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLALPRSHCPHCQQTIRVRDNIP  80

Query  74   LLSYLHQKGLCRYCKGVISIRYPLVEGAVAVLFSLLAL---ELGWSYsllgflvlssmlv  130
            LLS L  KG CR C++ IS RYPLVE   A+ F L +L   E GW+   L+ ++LS+ L+
Sbjct  81   LLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWG---LAVMILSAWLI  137

Query  131  vlavvDFEYlllpdqltlsllwlgllfnlPSAGFVALPLAVVGAVCGYLFFRLVEWIARR  190
              +V+D++   LPD +T ++LW GL+   +  + ++L  AV G + G++ F  + WIA  
Sbjct  138  AASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGI  197

Query  191  LTRRDALGMGD  201
            + R++ALGMGD
Sbjct  198  VLRKEALGMGD  208

139) yst1O in NC_008800


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 68.1 bits (239),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 103/244 (43%), Positives = 149/244 (62%), Gaps = 16/244 (6%)

Query  19   GLCVGSFLNVVIYRLPLMLT----------GAQQDDFNLCLPHSHCPKCQTQLKWRDNIP  68
            GL +GSFLNVVI R P+ML            + Q  ++L LP+SHCP CQ  ++ RDNIP
Sbjct  21   GLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSTQSKISLALPRSHCPHCQQTIRVRDNIP  80

Query  69   LFSWIWLQGQCRYCQIAIPVRYPlvevmtmlvtllIATTIPFGSPllaalllswtlialT  128
            L+SW+ L+G+CR CQ  I+ RYPLVE++T L  LL +   P ++  LA ++LS  LIA +
Sbjct  81   LLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAAS  140

Query  129  MIDIDHlllpdnltlpllWAGLLFH-LFDDILPLSDAVIGAVSGYLILWSLYWAFWWVTR  187
            +ID+D+  LPD +T  +LW+GL+     +  L L DAV G + G++ + SL W    V R
Sbjct  141  VIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLR  200

Query  188  REVLGYGDFKllaalgawlgwmalpsllltasltGIAFALIFRLLRKRPLNTALPFGPFL  247
            +E LG GD      L A LG    +  L   +L +   +LI+ ++ KR  +T+LPFGP L
Sbjct  201  KEALGMGD----VLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRG-STTLPFGPCL  255

Query  248  AFSG  251
            +++G
Sbjct  256  SLGG  259

140) KOX_11255 in NC_016612


> AJ617685|89|G87|47155038|CAE85237.1|Escherichia_coli_536|-|80245..81054|-|-|putative 
prepilin peptidase A
Length=269

 Score = 63.1 bits (220),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 140/215 (66%), Gaps = 6/215 (2%)

Query  43   MMERAEGVNLCLPASFCPQCRQPIAWRDNIPLLSFLWLRGRARCCGQPISRRYPLMELTT  102
            M      ++L LP S CP+C+Q I  RDNIPLLS L L+GR R C   IS+RYPL+EL T
Sbjct  50   MPSTQSKISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLT  109

Query  103  GALFVLAgylmapgmpllgglIFVSVLLILAAIDAqtqllpdrltlpllWAGLLFNLSDT  162
            +  F+LA+ + + +   L+ +I+ + L+  + ID + Q LPD +T  +LW+GL+   ++ 
Sbjct  110  ALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDNQWLPDVFTQGVLWTGLIAAWAQQ  169

Query  163  FA-PLAEAVIGAMVGYLSLWSVYWVFRLLTGKEALGYGDFKllaalgawlgwQPLPQTLL  221
             +  L +AV G +VG++++ S+ W+  ++  KEALG GD  L+AALG+W+G  +LP+  L
Sbjct  170  SPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVAL  229

Query  222  LASASGLVWTLLQRLVTRRSLEQPLAFGPWLALAG  256
            +AS  GL+ +    ++T+R+    L+FGP L+L+G
Sbjct  230  IASCCGLIYA----VITKRG-STTLPFGPCLSLGG  259