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Homologs of cesD gene of NC_013353_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) cesD
( YP_003232145.1 )

T3SS chaperone CesD

NC_013361
(Escherichia coli 11368)

2e-65

100

2) cesD
( YP_003223483.1 )

chaperone CesD

NC_013353
(Escherichia coli 12009)

2e-65

100

3) cesD
( YP_003236096.1 )

chaperone CesD

NC_013364
(Escherichia coli 11128)

2e-64

4) cesD
( YP_003501882.1 )

type III secretion low calcium response chaperone LcrH/SycD

NC_013941
(Escherichia coli CB9615)

2e-64

5) cesD
( YP_002331418.1 )

chaperone CesD

NC_011601
(Escherichia coli E2348/69)

2e-64

6) cesD
( NP_290276.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

2e-64

7) ECO55CA74_21255
( YP_006161356.1 )

type III secretion low calcium response chaperone LcrH/SycD

NC_017656
(Escherichia coli RM12579)

2e-64

8) ECs4576
( NP_312603.1 )

CesD

NC_002695
(Escherichia coli Sakai)

2e-64

9) cesD
( YP_003080488.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

2e-64

10) CDCO157_4311
( YP_006315176.1 )

protein CesD

NC_017906
(Escherichia coli Xuzhou21)

2e-64

11) cesD
( YP_003366510.1 )

T3SS chaperone CesD

NC_013716
(Citrobacter rodentium ICC168)

1e-63

12) cesD
( NP_902248.1 )

type III secretion system CesD protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

2e-31

• Sequence Alignments

1) cesD in NC_013353


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  241 bits (900),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151
            KAFKACLMWCNEQEKYATYKENIKKLLGNTD
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

2) cesD in NC_013361


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  241 bits (900),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151
            KAFKACLMWCNEQEKYATYKENIKKLLGNTD
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

3) cesD in NC_013364


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/151 (97%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSL+DIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGN+KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNTE  151
            KAFKACLMWCNE+EKY+TYKENIKKLLGNT+
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

4) cesD in NC_011601


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/151 (97%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSL+DIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGN+KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNTE  151
            KAFKACLMWCNE+EKY+TYKENIKKLLGNT+
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

5) cesD in NC_002655


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/151 (97%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSL+DIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGN+KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNTE  151
            KAFKACLMWCNE+EKY+TYKENIKKLLGNT+
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

6) ECs4576 in NC_002695


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/151 (97%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSL+DIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGN+KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNTE  151
            KAFKACLMWCNE+EKY+TYKENIKKLLGNT+
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

7) cesD in NC_013008


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/151 (97%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSL+DIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGN+KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNTE  151
            KAFKACLMWCNE+EKY+TYKENIKKLLGNT+
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

8) cesD in NC_013941


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/151 (97%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSL+DIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGN+KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNTE  151
            KAFKACLMWCNE+EKY+TYKENIKKLLGNT+
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

9) ECO55CA74_21255 in NC_017656


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/151 (97%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSL+DIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGN+KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNTE  151
            KAFKACLMWCNE+EKY+TYKENIKKLLGNT+
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

10) CDCO157_4311 in NC_017906


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/151 (97%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            MSRKFSSL+DIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGN+KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNTE  151
            KAFKACLMWCNE+EKY+TYKENIKKLLGNT+
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

11) cesD in NC_013716


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 143/151 (95%), Positives = 149/151 (99%), Gaps = 0/151 (0%)

Query  1    MSTKFSSLEEIYDFYQNGGTLASLTNLTQQDLNDLHSYAYTVYQSGDIITARNLFHLLTY  60
            MS KFSSL++IYDFYQ+GGTLASLTNLTQQDLNDLHSYAYT YQSGD+ITARNLFHLLTY
Sbjct  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120

Query  121  KAFKACLMWCNEQEKYSTYKENIKKLLDNTD  151
            KAFKACLMWCNEQEKY+TYKENIKKLL+NTD
Sbjct  121  KAFKACLMWCNEQEKYATYKENIKKLLGNTD  151

12) cesD in NC_005085


> NC_013353_P1|90|G66|260845705|YP_003223483.1|Escherichia_coli_O103:H2_str._12009|+|75751..76206|cesD|ECO103_3626|chaperone 
CesD
Length=151

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 62/141 (44%), Positives = 104/141 (74%), Gaps = 1/141 (0%)

Query  13   DELYRHFFSRGGSLRLLADIQGEDLESLYGYAKQLFDGGEIAAARNVYQLLSTLDHWNFD  72
            +++Y +F+  GG+L  L+++  +DL+ L +YA   +++G++ +ARN+++LL+ L+HWN+D
Sbjct  9    QDIY-DFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTYLEHWNYD  67

Query  73   YLLALGLCHQRLGAHNEAVVCFGRAGLIKVDDPRAAFYAGISYRLDGNAEYASKAFKAAI  132
            Y L+LGLCHQRL+ H++A +CF+R + + ++DPRA++Y+GISY L GN   A KAFKA +
Sbjct  68   YTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAKKAFKACL  127

Query  133  NWCGEQIDYQAIKASAVDMLA  153
             WC EQ  Y + K +   +L+
Sbjct  128  MWCNEQEKYATYKENIKKLLG  148