Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
RNA polymerase sigma factor |
NC_002935 (Corynebacterium diphtheriae NCTC13129) |
1e-75 |
100 |
|
ECF-family sigma factor D |
NC_016782 (Corynebacterium diphtheriae 241) |
2e-75 |
100 |
|
ECF family sigma factor D |
NC_016799 (Corynebacterium diphtheriae 31A) |
2e-75 |
100 |
|
ECF-family sigma factor D |
NC_016800 (Corynebacterium diphtheriae BH8) |
2e-75 |
100 |
|
ECF-family sigma factor D |
NC_016801 (Corynebacterium diphtheriae C7 (beta)) |
2e-75 |
100 |
|
ECF-family sigma factor D |
NC_016785 (Corynebacterium diphtheriae CDCE 8392) |
2e-75 |
100 |
|
ECF-family sigma factor D |
NC_016786 (Corynebacterium diphtheriae HC01) |
2e-75 |
100 |
|
ECF-family sigma factor D |
NC_016802 (Corynebacterium diphtheriae HC02) |
2e-75 |
100 |
|
ECF-family sigma factor D |
NC_016783 (Corynebacterium diphtheriae INCA 402) |
2e-75 |
100 |
|
ECF family sigma factor D |
NC_016790 (Corynebacterium diphtheriae VA01) |
2e-75 |
100 |
|
ECF-family sigma factor D |
NC_016787 (Corynebacterium diphtheriae HC03) |
2e-75 |
99 |
|
ECF family sigma factor D |
NC_016788 (Corynebacterium diphtheriae HC04) |
2e-75 |
99 |
|
ECF family sigma factor K |
NC_017462 (Corynebacterium pseudotuberculosis 267) |
5e-59 |
76 |
|
ECF family sigma factor K |
NC_017306 (Corynebacterium pseudotuberculosis 42/02-A) |
5e-59 |
76 |
|
ECF family sigma factor K |
NC_017303 (Corynebacterium pseudotuberculosis I19) |
5e-59 |
76 |
|
ECF family sigma factor K |
NC_017031 (Corynebacterium pseudotuberculosis P54B96) |
5e-59 |
76 |
|
ECF family sigma factor K |
NC_017305 (Corynebacterium pseudotuberculosis PAT10) |
5e-59 |
76 |
|
ECF family sigma factor K |
NC_017945 (Corynebacterium pseudotuberculosis 258) |
5e-59 |
74 |
|
ECF family sigma factor K |
NC_017307 (Corynebacterium pseudotuberculosis CIP 52.97) |
5e-59 |
74 |
|
ECF family sigma factor K |
NC_017308 (Corynebacterium pseudotuberculosis 1/06-A) |
6e-59 |
75 |
|
ECF family sigma factor K |
NC_014329 (Corynebacterium pseudotuberculosis FRC41) |
6e-59 |
75 |
|
ECF family sigma factor K |
NC_017301 (Corynebacterium pseudotuberculosis C231) |
7e-59 |
76 |
|
ECF family sigma factor K |
NC_018101 (Corynebacterium ulcerans 0102) |
7e-59 |
75 |
|
ECF-family sigma factor K |
NC_017317 (Corynebacterium ulcerans 809) |
7e-59 |
75 |
|
ECF family sigma factor K |
NC_015683 (Corynebacterium ulcerans BR-AD22) |
7e-59 |
75 |
|
ECF family sigma factor K |
NC_016781 (Corynebacterium pseudotuberculosis 3/99-5) |
1e-58 |
75 |
|
ECF family sigma factor K |
NC_017730 (Corynebacterium pseudotuberculosis 31) |
2e-58 |
75 |
|
ECF family sigma factor K |
NC_017300 (Corynebacterium pseudotuberculosis 1002) |
2e-57 |
75 |
|
ECF family sigma factor K |
NC_016932 (Corynebacterium pseudotuberculosis 316) |
3e-57 |
74 |
|
ECF family sigma factor K |
NC_018019 (Corynebacterium pseudotuberculosis Cp162) |
3e-57 |
74 |
|
ECF-family sigma factor K |
NC_012590 (Corynebacterium aurimucosum ATCC 700975) |
1e-40 |
53 |
|
ECF family RNA polymerase sigma factor K |
NC_007164 (Corynebacterium jeikeium K411) |
3e-39 |
57 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_015953 (Streptomyces sp. SirexAA-E) |
8e-37 |
51 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_015957 (Streptomyces violaceusniger Tu 4113) |
2e-34 |
47 |
|
ECF subfamily RNA polymerase sigma-70 factor |
NC_015564 (Amycolicicoccus subflavus DQS3-9A1) |
1e-33 |
46 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_013729 (Kribbella flavida DSM 17836) |
1e-32 |
50 |
|
RNA polymerase sigma factor |
NC_014550 (Arthrobacter arilaitensis Re117) |
1e-32 |
49 |
|
RNA polymerase sigma factor SigK |
NC_008699 (Nocardioides sp. JS614) |
2e-32 |
47 |
|
sigma factor |
NC_013929 (Streptomyces scabiei 87.22) |
2e-32 |
47 |
|
putative RNA polymerase ECF-subfamily sigma factor |
NC_017093 (Actinoplanes missouriensis 431) |
1e-31 |
44 |
|
RNA polymerase sigma factor SigK |
NC_009480 (Clavibacter michiganensis NCPPB 382) |
3e-31 |
46 |
|
RNA polymerase, sigma subunit, ECF family |
NC_014830 (Intrasporangium calvum DSM 43043) |
3e-31 |
43 |
|
RNA polymerase sigma-70 factor |
NC_018750 (Streptomyces venezuelae ATCC 10712) |
9e-31 |
47 |
|
RNA polymerase sigma factor SigK |
NC_010407 (Clavibacter michiganensis ATCC33113) |
2e-30 |
46 |
|
RNA polymerase sigma factor, ECF family |
NC_020891 (Clavibacter michiganensis NCPPB 2581) |
2e-30 |
46 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_016114 (Streptomyces flavogriseus ATCC 33331) |
3e-30 |
46 |
|
RNA polymerase sigma-70 factor |
NC_021055 (Streptomyces sp. PAMC26508) |
3e-30 |
46 |
|
RNA polymerase sigma factor SigK |
NC_021985 (Streptomyces collinus Tu 365) |
5e-30 |
47 |
|
RNA polymerase sigma factor SigK |
NC_003888 (Streptomyces coelicolor A3(2)) |
6e-30 |
48 |
|
RNA polymerase, sigma-24subunit, ECF subfamily |
NC_021177 (Streptomyces fulvissimus DSM 40593) |
9e-30 |
46 |
|
RNA polymerase sigma factor SigK |
NC_016906 (Gordonia polyisoprenivorans VH2) |
9e-30 |
42 |
|
RNA polymerase sigma factor SigK, ECF subfamily |
NC_020990 (Streptomyces albus J1074) |
1e-29 |
44 |
|
sigma-70 family RNA polymerase sigma factor |
NC_013441 (Gordonia bronchialis DSM 43247) |
2e-29 |
44 |
|
RNA polymerase sigma factor SigK |
NC_010572 (Streptomyces griseus NBRC 13350) |
2e-29 |
46 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_013235 (Nakamurella multipartita DSM 44233) |
2e-29 |
44 |
|
ECF family RNA polymerase sigma subunit |
NC_013521 (Sanguibacter keddieii DSM 10542) |
8e-29 |
46 |
|
RNA polymerase sigma factor SigK |
NC_009921 (Frankia sp. EAN1.pec) |
8e-29 |
45 |
|
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein |
NC_018581 (Gordonia sp. KTR9) |
2e-28 |
44 |
|
RNA polymerase sigma factor SigK |
NC_018681 (Nocardia brasiliensis HUJEG-1) |
7e-28 |
41 |
|
RNA polymerase sigma factor SigK (Sigma-K) |
NC_014355 (Candidatus Nitrospira defluvii ) |
2e-27 |
41 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_014666 (Frankia sp. EuI1c) |
5e-27 |
42 |
|
sigma-70 family RNA polymerase sigma factor |
NC_013441 (Gordonia bronchialis DSM 43247) |
1e-26 |
41 |
|
sigma factor |
NC_013929 (Streptomyces scabiei 87.22) |
4e-26 |
44 |
|
ECF subfamily RNA polymerase sigma-24 factor |
NC_014963 (Terriglobus saanensis SP1PR4) |
4e-26 |
41 |
|
RNA polymerase sigma-70 factor, ECF subfamily |
NC_022116 (Amycolatopsis mediterranei RB) |
8e-26 |
46 |
|
RNA polymerase sigma-70 factor, ECF subfamily |
NC_018266 (Amycolatopsis mediterranei S699) |
8e-26 |
46 |
|
ECF subfamily RNA polymerase sigma-70 factor |
NC_014318 (Amycolatopsis mediterranei U32) |
8e-26 |
46 |
|
RNA polymerase sigma factor SigK |
NC_008278 (Frankia alni ACN14a) |
8e-26 |
46 |
|
ECF subfamily RNA polymerase sigma-70 factor |
NC_017186 (Amycolatopsis mediterranei S699) |
9e-26 |
46 |
|
RNA polymerase, sigma-24 subunit, ECF subfamily |
NC_021191 (Actinoplanes sp. N902-109) |
1e-25 |
51 |
|
RNA polymerase sigma factor SigK |
NC_017186 (Amycolatopsis mediterranei S699) |
1e-25 |
44 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_012669 (Beutenbergia cavernae DSM 12333) |
1e-25 |
43 |
|
RNA polymerase sigma factor sigK |
NC_017803 (Actinoplanes sp. SE50/110) |
2e-25 |
47 |
|
RNA polymerase sigma factor SigK |
NC_020504 (Streptomyces davawensis JCM 4913) |
5e-25 |
47 |
|
RNA polymerase sigma factor SigK |
NC_008268 (Rhodococcus jostii RHA1) |
9e-25 |
42 |
|
RNA polymerase sigma factor SigK |
NC_006361 (Nocardia farcinica IFM 10152) |
2e-24 |
41 |
|
RNA polymerase sigma-70 factor, ECF subfamily |
NC_021252 (Amycolatopsis orientalis HCCB10007) |
3e-24 |
47 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_013595 (Streptosporangium roseum DSM 43021) |
3e-24 |
45 |
|
RNA polymerase sigma factor SigK |
NC_012522 (Rhodococcus opacus B4) |
3e-24 |
43 |
|
RNA polymerase sigma factor SigK |
NC_003155 (Streptomyces avermitilis MA-4680) |
4e-24 |
47 |
|
RNA polymerase sigma factor SigK |
NC_016582 (Streptomyces bingchenggensis BCW-1) |
1e-23 |
46 |
|
RNA polymerase sigma-70 factor, ECF subfamily |
NC_022116 (Amycolatopsis mediterranei RB) |
1e-23 |
44 |
|
RNA polymerase sigma-70 factor, ECF subfamily |
NC_018266 (Amycolatopsis mediterranei S699) |
1e-23 |
44 |
|
ECF subfamily RNA polymerase sigma-70 factor |
NC_014318 (Amycolatopsis mediterranei U32) |
1e-23 |
44 |
|
RNA polymerase sigma factor SigK |
NC_006087 (Leifsonia xyli CTCB07) |
9e-23 |
48 |
|
RNA polymerase sigma-70 factor, ECF subfamily |
NC_021252 (Amycolatopsis orientalis HCCB10007) |
9e-23 |
42 |
|
RNA polymerase sigma factor SigK (fragment) |
NC_016887 (Nocardia cyriacigeorgica GUH-2) |
5e-22 |
41 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_014158 (Tsukamurella paurometabola DSM 20162) |
2e-21 |
41 |
|
RNA polymerase sigma factor SigK |
NC_003888 (Streptomyces coelicolor A3(2)) |
3e-21 |
44 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_013131 (Catenulispora acidiphila DSM 44928) |
5e-20 |
44 |
|
putative RNA polymerase ECF subfamily sigma factor |
NC_016109 (Kitasatospora setae KM-6054) |
4e-19 |
43 |
|
RNA polymerase sigma factor SigK |
NC_021985 (Streptomyces collinus Tu 365) |
8e-19 |
42 |
|
ECF family RNA polymerase sigma-24 subunit |
NC_009664 (Kineococcus radiotolerans SRS30216) |
2e-18 |
48 |
|
ECF subfamily RNA polymerase sigma-24 subunit |
NC_013131 (Catenulispora acidiphila DSM 44928) |
1e-17 |
41 |
|
putative RNA polymerase ECF subfamily sigma factor |
NC_020520 (Ilumatobacter coccineum YM16-304) |
2e-17 |
44 |
|
RNA polymerase sigma factor SigK |
NC_022438 (Leifsonia xyli DSM 46306) |
2e-16 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_016782_P1' AND ph.id_pai_orf='49' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc