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Publication : - Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904. - Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA. |
No | Name | GenBank Accn | Position | Size(bp) | Strand | Virulence/Resistance | Description |
1 | iscA | AAT96058.1 | 258-581 | 324 | - | Not tested | - |
2 | iscU | AAT96059.1 | 616-1002 | 387 | - | Not tested | - |
3 | unnamed | AAT96060.1 | 1089-2303 | 1215 | - | Not tested | - |
4 | unnamed | AAT96061.1 | 2348-2839 | 492 | - | Not tested | - |
5 | cysE | AAT96062.1 | 2998-3786 | 789 | - | Not tested | - |
6 | unnamed | AAT96063.1 | 3786-4553 | 768 | - | Not tested | - |
7 | suhB | AAT96064.1 | 4769-5584 | 816 | + | Not tested | - |
8 | unnamed | AAT96065.1 | 5648-6187 | 540 | - | Not tested | - |
9 | secF | AAT96066.1 | 6298-7209 | 912 | - | Not tested | - |
10 | secD | AAT96067.1 | 7219-9087 | 1869 | - | Not tested | - |
11 | yajC | AAT96068.1 | 9150-9485 | 336 | - | Not tested | - |
12 | tgt | AAT96069.1 | 9541-10674 | 1134 | - | Not tested | - |
13 | queA | AAT96070.1 | 10671-11735 | 1065 | - | Not tested | - |
14 | unnamed | AAT96071.1 | 12102-13343 | 1242 | + | Not tested | - |
15 | unnamed | AAT96072.1 | 13587-14510 | 924 | + | Not tested | - |
16 | unnamed | AAT96073.1 | 14589-14906 | 318 | + | Not tested | - |
17 | unnamed | AAT96074.1 | 14903-15511 | 609 | + | Not tested | - |
18 | unnamed | AAT96075.1 | 15637-16395 | 759 | + | Not tested | - |
19 | unnamed | AAT96076.1 | 16398-16679 | 282 | + | Not tested | - |
20 | unnamed | AAT96077.1 | 16676-19570 | 2895 | + | Not tested | - |
21 | unnamed | AAT96078.1 | 19659-20501 | 843 | + | Not tested | - |
22 | unnamed | AAT96079.1 | 21102-22415 | 1314 | - | Not tested | - |
23 | unnamed | AAT96080.1 | 22644-23717 | 1074 | - | Not tested | - |
24 | unnamed | AAT96081.1 | 23744-24685 | 942 | - | Not tested | - |
25 | unnamed | AAT96082.1 | 24694-24912 | 219 | + | Not tested | - |
26 | unnamed | AAT96083.1 | 25676-25891 | 216 | - | Not tested | - |
27 | unnamed | AAT96084.1 | 25931-26389 | 459 | - | Not tested | - |
28 | unnamed | AAT96085.1 | 26458-26712 | 255 | - | Not tested | - |
29 | unnamed | AAT96086.1 | 27829-28851 | 1023 | + | Not tested | - |
30 | unnamed | AAT96087.1 | 29095-29937 | 843 | + | Not tested | - |
31 | unnamed | AAT96088.1 | 29982-30497 | 516 | + | Not tested | - |
32 | unnamed | AAT96089.1 | 30583-30993 | 411 | + | Not tested | - |
33 | unnamed | AAT96090.1 | 31124-31390 | 267 | - | Not tested | - |
34 | unnamed | AAT96091.1 | 31534-31863 | 330 | - | Not tested | - |
35 | unnamed | AAT96092.1 | 31914-32219 | 306 | + | Not tested | - |
36 | unnamed | AAT96093.1 | 32342-32737 | 396 | + | Not tested | - |
37 | unnamed | AAT96094.1 | 33150-33677 | 528 | + | Not tested | - |
38 | unnamed | AAT96095.1 | 33792-34739 | 948 | + | Not tested | - |
39 | unnamed | AAT96096.1 | 34834-35043 | 210 | + | Not tested | - |
40 | unnamed | AAT96097.1 | 35052-35969 | 918 | - | Not tested | - |
41 | unnamed | AAT96098.1 | 36029-36907 | 879 | + | Not tested | - |
42 | unnamed | AAT96099.1 | 37018-38319 | 1302 | + | Not tested | - |
43 | unnamed | AAT96100.1 | 38338-39186 | 849 | + | Not tested | - |
44 | unnamed | AAT96101.1 | 39183-40202 | 1020 | + | Not tested | - |
NC_014500 (Dickeya dadantii 3937): 1.8 Mb NC_013971 (Erwinia amylovora ATCC 49946): 1.1 Mb NC_013961 (Erwinia amylovora CFBP1430): 1.0 Mb NC_010322 (Pseudomonas putida GB-1): 1.0 Mb NC_005773 (Pseudomonas syringae 1448A): 1.5 Mb NC_007005 (Pseudomonas syringae B728a): 1.3 Mb NC_004578 (Pseudomonas syringae DC3000): 1.5 Mb NC_021741 (Serratia liquefaciens ATCC 27592): 1.0 Mb NC_009832 (Serratia proteamaculans 568): 1.2 Mb |