Pathogenicity Island: SPI-6


• General information

Name : SPI-6
Host strain : Salmonella enterica subsp. enterica serovar Typhi CT18
Function : safA-D and tcsA-R chaperone-usher fimbrialoperons6
Insertion site : tRNA-asp


• GenBank accessions: 1 records

1) NC_003198_P1 (58666 bp)

    Definition : Salmonella pathogenicity island 6 (SPI-6), (302092..360757) bp from NC_003198, Salmonella enterica subsp. enterica serovar Typhi str. CT18, complete chromosome.

    Publication :
    - Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    - Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    - Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.


      







• PAI-like regions homologous to this PAI (genomes and locations)

NC_014640 (Achromobacter xylosoxidans A8): 6.9 Mb
NC_010170 (Bordetella petrii DSM 12804): 4.3 Mb
NC_013716 (Citrobacter rodentium ICC168): 2.9 Mb
NC_017933 (Cronobacter sakazakii ES15): 3.0 Mb
NC_013282 (Cronobacter turicensis z3032): 1.3 Mb
NC_010524 (Leptothrix cholodnii SP-6): 4.6 Mb
NC_011770 (Pseudomonas aeruginosa LESB58): 0.1 Mb
NC_017548 (Pseudomonas aeruginosa M18): 0.1 Mb
NC_015379 (Pseudomonas brassicacearum NFM421): 6.7 Mb
NC_017911 (Pseudomonas fluorescens A506): 5.8 Mb
NC_021237 (Pseudomonas fluorescens CHA0): 6.7 Mb
NC_016830 (Pseudomonas fluorescens F113): 6.7 Mb
NC_012660 (Pseudomonas fluorescens SBW25): 6.6 Mb
NC_015556 (Pseudomonas fulva 12-X): 0.3 Mb
NC_015410 (Pseudomonas mendocina NK-01): 0.0 Mb
NC_009439 (Pseudomonas mendocina ymp): 2.6 Mb
NC_020209 (Pseudomonas poae RE*1-1-14): 4.6 Mb
NC_004129 (Pseudomonas protegens Pf-5): 6.9 Mb
NC_021820 (Salmonella enterica 08-1736): 1.6, 1.6 Mb
NC_016856 (Salmonella enterica 14028S): 0.3, 0.3 Mb
NC_011274 (Salmonella enterica 287/91): 0.3 Mb
NC_022241 (Salmonella enterica 3114): 0.3 Mb
NC_021810 (Salmonella enterica 41578): 2.1, 2.1 Mb
NC_017046 (Salmonella enterica 798): 0.3, 0.3 Mb
NC_011147 (Salmonella enterica AKU12601): 2.5 Mb
NC_006511 (Salmonella enterica ATCC 9150): 2.5 Mb
NC_017623 (Salmonella enterica B182): 1.0 Mb
NC_022221 (Salmonella enterica CDC1983-67): 2.7 Mb
NC_021844 (Salmonella enterica CFSAN000189): 3.6 Mb
NC_021814 (Salmonella enterica CFSAN001921): 3.2, 3.2 Mb
NC_021818 (Salmonella enterica CFSAN002050): 1.3, 1.4 Mb
NC_021812 (Salmonella enterica CFSAN002069): 1.5, 1.6 Mb
NC_003198 (Salmonella enterica CT18): 0.3 Mb
NC_011205 (Salmonella enterica CT_02021853): 0.3, 0.3 Mb
NC_011094 (Salmonella enterica CVM19633): 0.3, 0.3 Mb
NC_016854 (Salmonella enterica D23580): 0.3, 0.3 Mb
NC_003197 (Salmonella enterica LT2): 0.3, 0.3 Mb
NC_016832 (Salmonella enterica P-stx-12): 2.6 Mb
NC_011294 (Salmonella enterica P125109): 0.3 Mb
NC_012125 (Salmonella enterica RKS4594): 0.3, 0.3 Mb
NC_016831 (Salmonella enterica RKS5078): 2.7 Mb
NC_021984 (Salmonella enterica S06004): 2.7 Mb
NC_006905 (Salmonella enterica SC-B67): 0.3, 0.3 Mb
NC_010102 (Salmonella enterica SGSC4150; SPB7): 2.8 Mb
NC_016810 (Salmonella enterica SL1344): 0.3 Mb
NC_011080 (Salmonella enterica SL254): 0.3, 0.3 Mb
NC_011083 (Salmonella enterica SL476): 0.3, 0.3 Mb
NC_011149 (Salmonella enterica SL483): 0.3 Mb
NC_016857 (Salmonella enterica ST4/74): 0.3, 0.3 Mb
NC_016860 (Salmonella enterica T000240): 0.3, 0.3 Mb
NC_004631 (Salmonella enterica Ty2): 2.6 Mb
NC_021176 (Salmonella enterica Ty21a): 2.6 Mb
NC_021151 (Salmonella enterica U288): 2.7, 2.8 Mb
NC_016863 (Salmonella enterica UK-1): 0.3, 0.3 Mb
NC_021902 (Salmonella enterica USMARC-S3124.1): 1.3, 1.3 Mb
NC_017328 (Shigella flexneri 2002017): 0.2 Mb
NC_004741 (Shigella flexneri 2457T): 0.2 Mb
NC_014931 (Variovorax paradoxus EPS): 3.1, 3.5 Mb
NC_015224 (Yersinia enterocolitica 105.5R(r)): 1.9 Mb
NC_008800 (Yersinia enterocolitica 8081): 2.9 Mb
NC_017564 (Yersinia enterocolitica Y11): 1.6 Mb
NC_017168 (Yersinia pestis A1122): 2.5 Mb
NC_008150 (Yersinia pestis Antiqua): 2.4 Mb
NC_003143 (Yersinia pestis CO92): 3.3 Mb
NC_017154 (Yersinia pestis D106004): 3.3 Mb
NC_017160 (Yersinia pestis D182038): 3.3 Mb
NC_009381 (Yersinia pestis Pestoides F): 2.3 Mb
NC_014029 (Yersinia pestis Z176003): 3.3 Mb
NC_009708 (Yersinia pseudotuberculosis IP 31758): 1.6 Mb
NC_006155 (Yersinia pseudotuberculosis IP 32953): 3.1 Mb
NC_010634 (Yersinia pseudotuberculosis PB1/+): 3.1 Mb
NC_010465 (Yersinia pseudotuberculosis YPIII): 1.6 Mb